genoma-evolution 1.0.0

package/.claude/worktrees/phase-2-mcp/src/components/ui/theme-toggle.tsx

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+"use client"
+
+import { useCallback, useEffect, useRef, useState } from "react"
+import { Moon, Sun } from "lucide-react"
+import { flushSync } from "react-dom"
+import { useTheme } from "next-themes"
+import { motion, AnimatePresence } from "framer-motion"
+import { cn } from "@/lib/utils"
+
+// ─────────────────────────────────────────────────────────────
+// Types
+// ─────────────────────────────────────────────────────────────
+
+type ThemeToggleVariant = "default" | "pill" | "ghost"
+type ThemeToggleSize = "sm" | "md" | "lg"
+
+interface ThemeToggleProps extends React.ComponentPropsWithoutRef<"button"> {
+  /** Visual style variant */
+  variant?: ThemeToggleVariant
+  /** Size of the toggle */
+  size?: ThemeToggleSize
+  /** Duration of the View Transition ripple (ms) */
+  transitionDuration?: number
+  /** Show label next to icon */
+  showLabel?: boolean
+}
+
+// ─────────────────────────────────────────────────────────────
+// Constants
+// ─────────────────────────────────────────────────────────────
+
+const SIZE_MAP: Record<ThemeToggleSize, { button: string; icon: string; label: string }> = {
+  sm: { button: "h-8 w-8", icon: "h-3.5 w-3.5", label: "text-xs" },
+  md: { button: "h-10 w-10", icon: "h-4 w-4", label: "text-sm" },
+  lg: { button: "h-12 w-12", icon: "h-5 w-5", label: "text-base" },
+}
+
+const VARIANT_MAP: Record<ThemeToggleVariant, string> = {
+  default: [
+    "relative rounded-full border",
+    "bg-background/80 border-border",
+    "hover:bg-primary/10 hover:border-primary/30",
+    "dark:bg-card dark:border-white/10",
+    "dark:hover:bg-primary/20 dark:hover:border-primary/40",
+    "shadow-sm hover:shadow-md",
+    "backdrop-blur-sm",
+  ].join(" "),
+  pill: [
+    "relative rounded-full border px-3",
+    "bg-background/80 border-border",
+    "hover:bg-primary/10 hover:border-primary/30",
+    "dark:bg-card dark:border-white/10",
+    "dark:hover:bg-primary/20 dark:hover:border-primary/40",
+    "shadow-sm hover:shadow-md",
+    "backdrop-blur-sm",
+  ].join(" "),
+  ghost: [
+    "relative rounded-full",
+    "hover:bg-primary/10 dark:hover:bg-primary/20",
+  ].join(" "),
+}
+
+// ─────────────────────────────────────────────────────────────
+// Icon animations (Magic UI-style spring)
+// ─────────────────────────────────────────────────────────────
+
+const iconVariants = {
+  initial: { opacity: 0, scale: 0.5, rotate: -30, y: -4 },
+  animate: { opacity: 1, scale: 1, rotate: 0, y: 0 },
+  exit: { opacity: 0, scale: 0.5, rotate: 30, y: 4 },
+}
+
+const iconTransition = {
+  type: "spring" as const,
+  stiffness: 400,
+  damping: 20,
+}
+
+// ─────────────────────────────────────────────────────────────
+// Glow ring animation
+// ─────────────────────────────────────────────────────────────
+
+const GlowRing = ({ isDark }: { isDark: boolean }) => (
+  <motion.span
+    key={isDark ? "dark-ring" : "light-ring"}
+    className={cn(
+      "pointer-events-none absolute inset-[-3px] rounded-full",
+      isDark
+        ? "bg-gradient-to-tr from-violet-500/30 via-cyan-400/20 to-transparent"
+        : "bg-gradient-to-tr from-amber-400/30 via-orange-300/20 to-transparent"
+    )}
+    initial={{ opacity: 0, scale: 0.8 }}
+    animate={{ opacity: 1, scale: 1 }}
+    exit={{ opacity: 0, scale: 1.1 }}
+    transition={{ duration: 0.35, ease: "easeOut" }}
+  />
+)
+
+// ─────────────────────────────────────────────────────────────
+// ThemeToggle component
+// ─────────────────────────────────────────────────────────────
+
+export const ThemeToggle = ({
+  className,
+  variant = "default",
+  size = "md",
+  transitionDuration = 400,
+  showLabel = false,
+  ...props
+}: ThemeToggleProps) => {
+  const { theme, setTheme, resolvedTheme } = useTheme()
+  const buttonRef = useRef<HTMLButtonElement>(null)
+  const [mounted, setMounted] = useState(false)
+
+  useEffect(() => {
+    setMounted(true)
+  }, [])
+
+  // Avoid hydration mismatch: use theme before mount, resolvedTheme after
+  const isDark = mounted ? resolvedTheme === "dark" : theme === "dark"
+
+  const toggleTheme = useCallback(() => {
+    const button = buttonRef.current
+    if (!button) return
+
+    const { top, left, width, height } = button.getBoundingClientRect()
+    const x = left + width / 2
+    const y = top + height / 2
+    const vw = window.visualViewport?.width ?? window.innerWidth
+    const vh = window.visualViewport?.height ?? window.innerHeight
+    const maxRadius = Math.hypot(Math.max(x, vw - x), Math.max(y, vh - y))
+
+    const newTheme: string = isDark ? "light" : "dark"
+    const applyTheme = () => setTheme(newTheme)
+
+    // Graceful degradation when View Transitions not supported
+    if (typeof document.startViewTransition !== "function") {
+      applyTheme()
+      return
+    }
+
+    // Inject override styles to disable default crossfade
+    const style = document.createElement("style")
+    style.textContent = `
+      ::view-transition-old(root),
+      ::view-transition-new(root) {
+        animation: none;
+        mix-blend-mode: normal;
+      }
+      ::view-transition-new(root) { z-index: 999; }
+    `
+    document.head.appendChild(style)
+
+    const transition = document.startViewTransition(() => {
+      flushSync(applyTheme)
+    })
+
+    // Circular ripple from button centre
+    transition.ready.then(() => {
+      const keyframes = {
+        clipPath: [
+          `circle(0px at ${x}px ${y}px)`,
+          `circle(${maxRadius}px at ${x}px ${y}px)`,
+        ],
+      }
+      const timing: KeyframeAnimationOptions = {
+        duration: transitionDuration,
+        easing: "cubic-bezier(0.4, 0, 0.2, 1)",
+      }
+
+      document
+        .querySelector("::view-transition-new(root)")
+        ?.animate(keyframes, timing)
+
+      document
+        .querySelector("::view-transition-old(root)")
+        ?.animate(
+          {
+            clipPath: [
+              `circle(${maxRadius}px at ${x}px ${y}px)`,
+              `circle(0px at ${x}px ${y}px)`,
+            ],
+          },
+          timing
+        )
+    })
+
+    transition.finished.finally(() => style.remove())
+  }, [isDark, setTheme, transitionDuration])
+
+  const sizes = SIZE_MAP[size]
+  const isPill = variant === "pill"
+
+  return (
+    <button
+      ref={buttonRef}
+      id="theme-toggle"
+      onClick={toggleTheme}
+      aria-label={isDark ? "Switch to light mode" : "Switch to dark mode"}
+      aria-pressed={isDark}
+      title={isDark ? "Switch to light mode" : "Switch to dark mode"}
+      className={cn(
+        "inline-flex items-center justify-center gap-2",
+        "focus-visible:outline-none focus-visible:ring-2 focus-visible:ring-ring focus-visible:ring-offset-2",
+        "transition-all duration-200 ease-out",
+        "cursor-pointer select-none",
+        !isPill && sizes.button,
+        VARIANT_MAP[variant],
+        className
+      )}
+      {...props}
+    >
+      {/* Animated glow ring (behind icon) */}
+      <AnimatePresence mode="wait">
+        <GlowRing key={isDark ? "dark" : "light"} isDark={isDark} />
+      </AnimatePresence>
+
+      {/* Sun / Moon icon with spring animation */}
+      <span className="relative z-10 flex items-center justify-center">
+        <AnimatePresence mode="wait" initial={false}>
+          {isDark ? (
+            <motion.span
+              key="moon"
+              variants={iconVariants}
+              initial="initial"
+              animate="animate"
+              exit="exit"
+              transition={iconTransition}
+              className="flex items-center justify-center text-violet-400 dark:text-violet-300"
+            >
+              <Moon className={sizes.icon} strokeWidth={2} />
+            </motion.span>
+          ) : (
+            <motion.span
+              key="sun"
+              variants={iconVariants}
+              initial="initial"
+              animate="animate"
+              exit="exit"
+              transition={iconTransition}
+              className="flex items-center justify-center text-amber-500"
+            >
+              <Sun className={sizes.icon} strokeWidth={2} />
+            </motion.span>
+          )}
+        </AnimatePresence>
+      </span>
+
+      {/* Optional label */}
+      {showLabel && (
+        <AnimatePresence mode="wait" initial={false}>
+          <motion.span
+            key={isDark ? "dark-label" : "light-label"}
+            initial={{ opacity: 0, x: -4 }}
+            animate={{ opacity: 1, x: 0 }}
+            exit={{ opacity: 0, x: 4 }}
+            transition={{ duration: 0.2 }}
+            className={cn(
+              "relative z-10 font-medium tabular-nums",
+              sizes.label,
+              isDark ? "text-violet-300" : "text-amber-600"
+            )}
+          >
+            {isDark ? "Dark" : "Light"}
+          </motion.span>
+        </AnimatePresence>
+      )}
+    </button>
+  )
+}
+
+export default ThemeToggle

package/.claude/worktrees/phase-2-mcp/src/components/ui/tooltip.tsx

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+"use client"
+
+import * as React from "react"
+import { Tooltip as TooltipPrimitive } from "radix-ui"
+
+import { cn } from "@/lib/utils"
+
+function TooltipProvider({
+  delayDuration = 0,
+  ...props
+}: React.ComponentProps<typeof TooltipPrimitive.Provider>) {
+  return (
+    <TooltipPrimitive.Provider
+      data-slot="tooltip-provider"
+      delayDuration={delayDuration}
+      {...props}
+    />
+  )
+}
+
+function Tooltip({
+  ...props
+}: React.ComponentProps<typeof TooltipPrimitive.Root>) {
+  return <TooltipPrimitive.Root data-slot="tooltip" {...props} />
+}
+
+function TooltipTrigger({
+  ...props
+}: React.ComponentProps<typeof TooltipPrimitive.Trigger>) {
+  return <TooltipPrimitive.Trigger data-slot="tooltip-trigger" {...props} />
+}
+
+function TooltipContent({
+  className,
+  sideOffset = 0,
+  children,
+  ...props
+}: React.ComponentProps<typeof TooltipPrimitive.Content>) {
+  return (
+    <TooltipPrimitive.Portal>
+      <TooltipPrimitive.Content
+        data-slot="tooltip-content"
+        sideOffset={sideOffset}
+        className={cn(
+          "z-50 inline-flex w-fit max-w-xs origin-(--radix-tooltip-content-transform-origin) items-center gap-1.5 rounded-md bg-foreground px-3 py-1.5 text-xs text-background has-data-[slot=kbd]:pr-1.5 data-[side=bottom]:slide-in-from-top-2 data-[side=left]:slide-in-from-right-2 data-[side=right]:slide-in-from-left-2 data-[side=top]:slide-in-from-bottom-2 **:data-[slot=kbd]:relative **:data-[slot=kbd]:isolate **:data-[slot=kbd]:z-50 **:data-[slot=kbd]:rounded-sm data-[state=delayed-open]:animate-in data-[state=delayed-open]:fade-in-0 data-[state=delayed-open]:zoom-in-95 data-open:animate-in data-open:fade-in-0 data-open:zoom-in-95 data-closed:animate-out data-closed:fade-out-0 data-closed:zoom-out-95",
+          className
+        )}
+        {...props}
+      >
+        {children}
+        <TooltipPrimitive.Arrow className="z-50 size-2.5 translate-y-[calc(-50%_-_2px)] rotate-45 rounded-[2px] bg-foreground fill-foreground" />
+      </TooltipPrimitive.Content>
+    </TooltipPrimitive.Portal>
+  )
+}
+
+export { Tooltip, TooltipContent, TooltipProvider, TooltipTrigger }

package/.claude/worktrees/phase-2-mcp/src/hooks/use-mobile.ts

@@ -0,0 +1,19 @@
+import * as React from "react"
+
+const MOBILE_BREAKPOINT = 768
+
+export function useIsMobile() {
+  const [isMobile, setIsMobile] = React.useState<boolean | undefined>(undefined)
+
+  React.useEffect(() => {
+    const mql = window.matchMedia(`(max-width: ${MOBILE_BREAKPOINT - 1}px)`)
+    const onChange = () => {
+      setIsMobile(window.innerWidth < MOBILE_BREAKPOINT)
+    }
+    mql.addEventListener("change", onChange)
+    setIsMobile(window.innerWidth < MOBILE_BREAKPOINT)
+    return () => mql.removeEventListener("change", onChange)
+  }, [])
+
+  return !!isMobile
+}