docrev 0.11.1 → 0.11.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (116) hide show
  1. package/.gitattributes +1 -1
  2. package/CHANGELOG.md +202 -197
  3. package/PLAN-tables-and-postprocess.md +850 -850
  4. package/README.md +433 -433
  5. package/bin/rev.js +11 -11
  6. package/bin/rev.ts +145 -145
  7. package/completions/rev.bash +127 -127
  8. package/completions/rev.ps1 +210 -210
  9. package/completions/rev.zsh +207 -207
  10. package/dist/lib/build.d.ts +28 -0
  11. package/dist/lib/build.d.ts.map +1 -1
  12. package/dist/lib/build.js +81 -4
  13. package/dist/lib/build.js.map +1 -1
  14. package/dist/lib/commands/utilities.js +164 -164
  15. package/dist/lib/commands/word-tools.js +8 -8
  16. package/dist/lib/grammar.js +3 -3
  17. package/dist/lib/macro-filter.lua +201 -201
  18. package/dist/lib/pdf-comments.js +44 -44
  19. package/dist/lib/plugins.js +57 -57
  20. package/dist/lib/pptx-color-filter.lua +37 -37
  21. package/dist/lib/pptx-themes.js +115 -115
  22. package/dist/lib/schema.d.ts.map +1 -1
  23. package/dist/lib/schema.js +8 -2
  24. package/dist/lib/schema.js.map +1 -1
  25. package/dist/lib/spelling.js +2 -2
  26. package/dist/lib/templates.js +387 -387
  27. package/dist/lib/themes.js +51 -51
  28. package/eslint.config.js +27 -27
  29. package/lib/anchor-match.ts +307 -307
  30. package/lib/annotations.ts +664 -664
  31. package/lib/build.ts +2047 -1956
  32. package/lib/citations.ts +160 -160
  33. package/lib/commands/build.ts +885 -885
  34. package/lib/commands/citations.ts +515 -515
  35. package/lib/commands/comments.ts +1050 -1050
  36. package/lib/commands/context.ts +176 -176
  37. package/lib/commands/core.ts +309 -309
  38. package/lib/commands/doi.ts +451 -451
  39. package/lib/commands/file-ops.ts +372 -372
  40. package/lib/commands/history.ts +320 -320
  41. package/lib/commands/index.ts +87 -87
  42. package/lib/commands/init.ts +259 -259
  43. package/lib/commands/merge-resolve.ts +378 -378
  44. package/lib/commands/preview.ts +178 -178
  45. package/lib/commands/project-info.ts +244 -244
  46. package/lib/commands/quality.ts +517 -517
  47. package/lib/commands/response.ts +454 -454
  48. package/lib/commands/section-boundaries.ts +82 -82
  49. package/lib/commands/sections.ts +451 -451
  50. package/lib/commands/sync.ts +689 -689
  51. package/lib/commands/text-ops.ts +449 -449
  52. package/lib/commands/utilities.ts +448 -448
  53. package/lib/commands/verify-anchors.ts +272 -272
  54. package/lib/commands/word-tools.ts +340 -340
  55. package/lib/comment-realign.ts +99 -99
  56. package/lib/config.ts +84 -84
  57. package/lib/crossref.ts +781 -781
  58. package/lib/csl.ts +191 -191
  59. package/lib/dependencies.ts +132 -132
  60. package/lib/diff-engine.ts +465 -465
  61. package/lib/doi-cache.ts +115 -115
  62. package/lib/doi.ts +879 -879
  63. package/lib/equations.ts +506 -506
  64. package/lib/errors.ts +350 -350
  65. package/lib/format.ts +541 -541
  66. package/lib/git.ts +326 -326
  67. package/lib/grammar.ts +303 -303
  68. package/lib/image-registry.ts +180 -180
  69. package/lib/import.ts +906 -906
  70. package/lib/journals.ts +543 -543
  71. package/lib/macro-filter.lua +201 -201
  72. package/lib/macros.ts +273 -273
  73. package/lib/merge.ts +633 -633
  74. package/lib/ooxml.ts +768 -768
  75. package/lib/orcid.ts +144 -144
  76. package/lib/pdf-comments.ts +263 -263
  77. package/lib/pdf-import.ts +524 -524
  78. package/lib/plugins.ts +362 -362
  79. package/lib/postprocess.ts +188 -188
  80. package/lib/pptx-color-filter.lua +37 -37
  81. package/lib/pptx-template.ts +469 -469
  82. package/lib/pptx-themes.ts +483 -483
  83. package/lib/protect-restore.ts +520 -520
  84. package/lib/rate-limiter.ts +127 -127
  85. package/lib/response.ts +197 -197
  86. package/lib/restore-references.ts +240 -240
  87. package/lib/review.ts +327 -327
  88. package/lib/schema.ts +494 -488
  89. package/lib/scientific-words.ts +73 -73
  90. package/lib/sections.ts +428 -428
  91. package/lib/slides.ts +756 -756
  92. package/lib/spelling.ts +334 -334
  93. package/lib/templates.ts +526 -526
  94. package/lib/themes.ts +742 -742
  95. package/lib/trackchanges.ts +166 -166
  96. package/lib/tui.ts +450 -450
  97. package/lib/types.ts +546 -546
  98. package/lib/undo.ts +250 -250
  99. package/lib/utils.ts +69 -69
  100. package/lib/variables.ts +179 -179
  101. package/lib/word-extraction.ts +525 -525
  102. package/lib/word.ts +526 -526
  103. package/lib/wordcomments.ts +789 -789
  104. package/package.json +1 -1
  105. package/scripts/postbuild.js +47 -47
  106. package/skill/REFERENCE.md +550 -550
  107. package/skill/SKILL.md +302 -302
  108. package/tsconfig.json +26 -26
  109. package/types/index.d.ts +531 -531
  110. package/issues.md +0 -180
  111. package/site/assets/extra.css +0 -208
  112. package/site/commands.html +0 -926
  113. package/site/configuration.html +0 -469
  114. package/site/index.html +0 -288
  115. package/site/troubleshooting.html +0 -461
  116. package/site/workflow.html +0 -518
@@ -1,372 +1,372 @@
1
- /**
2
- * File operation commands: backup, archive, export, clean
3
- *
4
- * Commands that create, move, or delete project files.
5
- */
6
-
7
- import type { Command } from 'commander';
8
- import {
9
- chalk,
10
- fs,
11
- path,
12
- fmt,
13
- findFiles,
14
- loadBuildConfig,
15
- } from './context.js';
16
-
17
- // Use the actual BuildConfig from build.ts which allows string|Author[]
18
- type BuildConfig = ReturnType<typeof loadBuildConfig>;
19
-
20
- interface ZipLike {
21
- addLocalFile(localPath: string, zipPath?: string): void;
22
- }
23
-
24
- /**
25
- * Recursively add directory contents to a zip archive, filtering by predicate
26
- */
27
- function addDirToZip(
28
- zip: ZipLike,
29
- dir: string,
30
- shouldInclude: (name: string) => boolean,
31
- zipPath = '',
32
- ): void {
33
- const entries = fs.readdirSync(dir, { withFileTypes: true });
34
- for (const entry of entries) {
35
- const fullPath = path.join(dir, entry.name);
36
- const entryZipPath = path.join(zipPath, entry.name);
37
-
38
- if (!shouldInclude(entry.name)) continue;
39
-
40
- if (entry.isDirectory()) {
41
- addDirToZip(zip, fullPath, shouldInclude, entryZipPath);
42
- } else {
43
- zip.addLocalFile(fullPath, zipPath || undefined);
44
- }
45
- }
46
- }
47
-
48
- // Options interfaces
49
- interface BackupOptions {
50
- name?: string;
51
- output?: string;
52
- }
53
-
54
- interface ArchiveOptions {
55
- dir?: string;
56
- by?: string;
57
- rename?: boolean;
58
- dryRun?: boolean;
59
- }
60
-
61
- interface ExportOptions {
62
- output?: string;
63
- includeOutput?: boolean;
64
- }
65
-
66
- interface CleanOptions {
67
- dryRun?: boolean;
68
- all?: boolean;
69
- }
70
-
71
- /**
72
- * Register file-ops commands with the program
73
- */
74
- export function register(program: Command): void {
75
- // ==========================================================================
76
- // BACKUP command - Timestamped project backup
77
- // ==========================================================================
78
-
79
- program
80
- .command('backup')
81
- .description('Create timestamped project backup')
82
- .option('-n, --name <name>', 'Custom backup name')
83
- .option('-o, --output <dir>', 'Output directory', '.')
84
- .action(async (options: BackupOptions) => {
85
- const { default: AdmZip } = await import('adm-zip');
86
- const zip = new AdmZip();
87
-
88
- const date = new Date().toISOString().slice(0, 10);
89
- const name = options.name || `backup-${date}`;
90
- const outputPath = path.join(options.output || '.', `${name}.zip`);
91
-
92
- // Files to exclude
93
- const excludePatterns = [
94
- 'node_modules', '.git', '.DS_Store', '*.zip',
95
- 'paper.md' // Generated file
96
- ];
97
-
98
- const shouldInclude = (file: string): boolean => {
99
- for (const pattern of excludePatterns) {
100
- if (file.includes(pattern.replace('*', ''))) return false;
101
- }
102
- return true;
103
- };
104
-
105
- addDirToZip(zip, '.', shouldInclude);
106
-
107
- zip.writeZip(outputPath);
108
- console.log(fmt.status('success', `Backup created: ${outputPath}`));
109
- });
110
-
111
- // ==========================================================================
112
- // ARCHIVE command - Archive reviewer docx files
113
- // ==========================================================================
114
-
115
- program
116
- .command('archive')
117
- .description('Move reviewer .docx files to archive folder')
118
- .argument('[files...]', 'Specific files to archive (default: all .docx)')
119
- .option('-d, --dir <folder>', 'Archive folder name', 'archive')
120
- .option('--by <name>', 'Reviewer name (auto-detected if single commenter)')
121
- .option('--no-rename', 'Keep original filenames')
122
- .option('--dry-run', 'Preview without moving files')
123
- .action(async (files: string[] | undefined, options: ArchiveOptions) => {
124
- const { extractWordComments } = await import('../import.js');
125
- const { default: YAML } = await import('yaml');
126
-
127
- // Find docx files to archive
128
- let docxFiles = files && files.length > 0
129
- ? files.filter(f => f.endsWith('.docx') && fs.existsSync(f))
130
- : findFiles('.docx');
131
-
132
- // Exclude our own build outputs
133
- let projectSlug: string | null = null;
134
- const configPath = path.join(process.cwd(), 'rev.yaml');
135
- if (fs.existsSync(configPath)) {
136
- try {
137
- const config = YAML.parse(fs.readFileSync(configPath, 'utf-8'));
138
- if (config.title) {
139
- projectSlug = config.title
140
- .toLowerCase()
141
- .replace(/[^a-z0-9]+/g, '-')
142
- .replace(/^-|-$/g, '')
143
- .slice(0, 50);
144
- }
145
- } catch (e) {
146
- // Ignore config errors
147
- }
148
- }
149
-
150
- // Filter out build outputs
151
- if (projectSlug && (!files || files.length === 0)) {
152
- const buildPatterns = [
153
- `${projectSlug}.docx`,
154
- `${projectSlug}_comments.docx`,
155
- `${projectSlug}-changes.docx`,
156
- 'paper.docx',
157
- 'paper_comments.docx',
158
- 'paper-changes.docx',
159
- ];
160
- const excluded: string[] = [];
161
- docxFiles = docxFiles.filter(f => {
162
- const base = path.basename(f).toLowerCase();
163
- const isBuilt = buildPatterns.includes(base);
164
- if (isBuilt) excluded.push(f);
165
- return !isBuilt;
166
- });
167
- if (excluded.length > 0) {
168
- console.log(chalk.dim(` Skipping build outputs: ${excluded.join(', ')}`));
169
- console.log();
170
- }
171
- }
172
-
173
- if (docxFiles.length === 0) {
174
- console.log(fmt.status('info', 'No .docx files to archive.'));
175
- return;
176
- }
177
-
178
- const projectTitle = projectSlug;
179
-
180
- // Create archive folder
181
- const archiveDir = path.resolve(options.dir || 'archive');
182
- if (!options.dryRun && !fs.existsSync(archiveDir)) {
183
- fs.mkdirSync(archiveDir, { recursive: true });
184
- }
185
-
186
- console.log(fmt.header('Archive'));
187
- console.log();
188
-
189
- const moved: string[] = [];
190
- for (const file of docxFiles) {
191
- const stat = fs.statSync(file);
192
- const mtime = stat.mtime;
193
- const timestamp = mtime.toISOString().slice(0, 19).replace(/[-:]/g, '').replace('T', '_');
194
-
195
- // Determine reviewer name
196
- let reviewer: string | null = options.by || null;
197
- if (!reviewer && options.rename !== false) {
198
- try {
199
- const comments = await extractWordComments(file);
200
- const authors = [...new Set(comments.map(c => c.author).filter(a => a && a !== 'Unknown'))];
201
- if (authors.length === 1) {
202
- reviewer = authors[0].replace(/[^a-zA-Z0-9]/g, '-').replace(/^-|-$/g, '');
203
- }
204
- } catch (e) {
205
- // Ignore extraction errors
206
- }
207
- }
208
-
209
- // Generate new name
210
- let newName: string;
211
- if (options.rename === false) {
212
- newName = path.basename(file);
213
- } else {
214
- const base = path.basename(file, '.docx');
215
- if (/^\d{8}_\d{6}_/.test(base)) {
216
- newName = path.basename(file);
217
- } else {
218
- const namePart = projectTitle || base;
219
- if (reviewer) {
220
- newName = `${timestamp}_${reviewer}_${namePart}.docx`;
221
- } else {
222
- newName = `${timestamp}_${namePart}.docx`;
223
- }
224
- }
225
- }
226
-
227
- const destPath = path.join(archiveDir, newName);
228
-
229
- if (options.dryRun) {
230
- console.log(` ${chalk.dim(file)} → ${chalk.cyan(path.join(options.dir || 'archive', newName))}`);
231
- } else {
232
- // Handle name collision
233
- let finalPath = destPath;
234
- let counter = 1;
235
- while (fs.existsSync(finalPath)) {
236
- const ext = path.extname(newName);
237
- const base = path.basename(newName, ext);
238
- finalPath = path.join(archiveDir, `${base}_${counter}${ext}`);
239
- counter++;
240
- }
241
- fs.renameSync(file, finalPath);
242
- console.log(` ${chalk.dim(file)} → ${chalk.green(path.relative(process.cwd(), finalPath))}`);
243
- }
244
- moved.push(file);
245
- }
246
-
247
- console.log();
248
- if (options.dryRun) {
249
- console.log(fmt.status('info', `Would archive ${moved.length} file(s). Run without --dry-run to proceed.`));
250
- } else {
251
- console.log(fmt.status('success', `Archived ${moved.length} file(s) to ${options.dir || 'archive'}/`));
252
- }
253
- });
254
-
255
- // ==========================================================================
256
- // EXPORT command - Export project as distributable zip
257
- // ==========================================================================
258
-
259
- program
260
- .command('export')
261
- .description('Export project as distributable zip')
262
- .option('-o, --output <file>', 'Output filename')
263
- .option('--include-output', 'Include built PDF/DOCX files')
264
- .action(async (options: ExportOptions) => {
265
- const { default: AdmZip } = await import('adm-zip');
266
- const { build } = await import('../build.js');
267
-
268
- let config: Partial<BuildConfig> = {};
269
- try {
270
- config = loadBuildConfig('.') || {};
271
- } catch {
272
- // Not in a rev project, that's ok
273
- }
274
-
275
- // Build first if including output
276
- if (options.includeOutput) {
277
- console.log(chalk.dim('Building documents...'));
278
- await build('.', ['pdf', 'docx']);
279
- }
280
-
281
- const zip = new AdmZip();
282
- const projectName = config.title?.replace(/[^a-zA-Z0-9]/g, '-').toLowerCase() || 'project';
283
- const outputPath = options.output || `${projectName}-export.zip`;
284
-
285
- const exclude = ['node_modules', '.git', '.DS_Store', '*.zip'];
286
-
287
- const shouldInclude = (name: string): boolean => {
288
- if (!options.includeOutput && (name.endsWith('.pdf') || name.endsWith('.docx'))) {
289
- return false;
290
- }
291
- for (const pattern of exclude) {
292
- if (name === pattern || name.includes(pattern.replace('*', ''))) return false;
293
- }
294
- return true;
295
- };
296
-
297
- addDirToZip(zip, '.', shouldInclude);
298
-
299
- zip.writeZip(outputPath);
300
- console.log(fmt.status('success', `Exported: ${outputPath}`));
301
- });
302
-
303
- // ==========================================================================
304
- // CLEAN command - Remove generated files
305
- // ==========================================================================
306
-
307
- program
308
- .command('clean')
309
- .description('Remove generated files (paper.md, PDFs, DOCXs)')
310
- .option('-n, --dry-run', 'Show what would be deleted without deleting')
311
- .option('--all', 'Also remove backup and export zips')
312
- .action((options: CleanOptions) => {
313
- let config: Partial<BuildConfig> = {};
314
- try {
315
- config = loadBuildConfig('.') || {};
316
- } catch {
317
- // Not in a rev project, that's ok
318
- }
319
-
320
- const projectName = config.title?.toLowerCase().replace(/\s+/g, '-') || 'paper';
321
-
322
- // Files to clean
323
- const patterns = [
324
- 'paper.md',
325
- '*.pdf',
326
- `${projectName}.docx`,
327
- `${projectName}.pdf`,
328
- `${projectName}.tex`,
329
- '.paper-*.md', // Temp build files
330
- ];
331
-
332
- if (options.all) {
333
- patterns.push('*.zip', 'backup-*.zip', '*-export.zip');
334
- }
335
-
336
- const toDelete: string[] = [];
337
-
338
- for (const pattern of patterns) {
339
- if (pattern.includes('*')) {
340
- const regex = new RegExp('^' + pattern.replace(/\./g, '\\.').replace(/\*/g, '.*') + '$');
341
- const files = fs.readdirSync('.').filter(f => regex.test(f));
342
- toDelete.push(...files);
343
- } else if (fs.existsSync(pattern)) {
344
- toDelete.push(pattern);
345
- }
346
- }
347
-
348
- if (toDelete.length === 0) {
349
- console.log(chalk.dim('No generated files to clean.'));
350
- return;
351
- }
352
-
353
- console.log(fmt.header('Clean'));
354
- console.log();
355
-
356
- for (const file of toDelete) {
357
- if (options.dryRun) {
358
- console.log(chalk.dim(` Would delete: ${file}`));
359
- } else {
360
- fs.unlinkSync(file);
361
- console.log(chalk.red(` Deleted: ${file}`));
362
- }
363
- }
364
-
365
- console.log();
366
- if (options.dryRun) {
367
- console.log(chalk.dim(`Would delete ${toDelete.length} file(s). Run without --dry-run to delete.`));
368
- } else {
369
- console.log(fmt.status('success', `Cleaned ${toDelete.length} file(s)`));
370
- }
371
- });
372
- }
1
+ /**
2
+ * File operation commands: backup, archive, export, clean
3
+ *
4
+ * Commands that create, move, or delete project files.
5
+ */
6
+
7
+ import type { Command } from 'commander';
8
+ import {
9
+ chalk,
10
+ fs,
11
+ path,
12
+ fmt,
13
+ findFiles,
14
+ loadBuildConfig,
15
+ } from './context.js';
16
+
17
+ // Use the actual BuildConfig from build.ts which allows string|Author[]
18
+ type BuildConfig = ReturnType<typeof loadBuildConfig>;
19
+
20
+ interface ZipLike {
21
+ addLocalFile(localPath: string, zipPath?: string): void;
22
+ }
23
+
24
+ /**
25
+ * Recursively add directory contents to a zip archive, filtering by predicate
26
+ */
27
+ function addDirToZip(
28
+ zip: ZipLike,
29
+ dir: string,
30
+ shouldInclude: (name: string) => boolean,
31
+ zipPath = '',
32
+ ): void {
33
+ const entries = fs.readdirSync(dir, { withFileTypes: true });
34
+ for (const entry of entries) {
35
+ const fullPath = path.join(dir, entry.name);
36
+ const entryZipPath = path.join(zipPath, entry.name);
37
+
38
+ if (!shouldInclude(entry.name)) continue;
39
+
40
+ if (entry.isDirectory()) {
41
+ addDirToZip(zip, fullPath, shouldInclude, entryZipPath);
42
+ } else {
43
+ zip.addLocalFile(fullPath, zipPath || undefined);
44
+ }
45
+ }
46
+ }
47
+
48
+ // Options interfaces
49
+ interface BackupOptions {
50
+ name?: string;
51
+ output?: string;
52
+ }
53
+
54
+ interface ArchiveOptions {
55
+ dir?: string;
56
+ by?: string;
57
+ rename?: boolean;
58
+ dryRun?: boolean;
59
+ }
60
+
61
+ interface ExportOptions {
62
+ output?: string;
63
+ includeOutput?: boolean;
64
+ }
65
+
66
+ interface CleanOptions {
67
+ dryRun?: boolean;
68
+ all?: boolean;
69
+ }
70
+
71
+ /**
72
+ * Register file-ops commands with the program
73
+ */
74
+ export function register(program: Command): void {
75
+ // ==========================================================================
76
+ // BACKUP command - Timestamped project backup
77
+ // ==========================================================================
78
+
79
+ program
80
+ .command('backup')
81
+ .description('Create timestamped project backup')
82
+ .option('-n, --name <name>', 'Custom backup name')
83
+ .option('-o, --output <dir>', 'Output directory', '.')
84
+ .action(async (options: BackupOptions) => {
85
+ const { default: AdmZip } = await import('adm-zip');
86
+ const zip = new AdmZip();
87
+
88
+ const date = new Date().toISOString().slice(0, 10);
89
+ const name = options.name || `backup-${date}`;
90
+ const outputPath = path.join(options.output || '.', `${name}.zip`);
91
+
92
+ // Files to exclude
93
+ const excludePatterns = [
94
+ 'node_modules', '.git', '.DS_Store', '*.zip',
95
+ 'paper.md' // Generated file
96
+ ];
97
+
98
+ const shouldInclude = (file: string): boolean => {
99
+ for (const pattern of excludePatterns) {
100
+ if (file.includes(pattern.replace('*', ''))) return false;
101
+ }
102
+ return true;
103
+ };
104
+
105
+ addDirToZip(zip, '.', shouldInclude);
106
+
107
+ zip.writeZip(outputPath);
108
+ console.log(fmt.status('success', `Backup created: ${outputPath}`));
109
+ });
110
+
111
+ // ==========================================================================
112
+ // ARCHIVE command - Archive reviewer docx files
113
+ // ==========================================================================
114
+
115
+ program
116
+ .command('archive')
117
+ .description('Move reviewer .docx files to archive folder')
118
+ .argument('[files...]', 'Specific files to archive (default: all .docx)')
119
+ .option('-d, --dir <folder>', 'Archive folder name', 'archive')
120
+ .option('--by <name>', 'Reviewer name (auto-detected if single commenter)')
121
+ .option('--no-rename', 'Keep original filenames')
122
+ .option('--dry-run', 'Preview without moving files')
123
+ .action(async (files: string[] | undefined, options: ArchiveOptions) => {
124
+ const { extractWordComments } = await import('../import.js');
125
+ const { default: YAML } = await import('yaml');
126
+
127
+ // Find docx files to archive
128
+ let docxFiles = files && files.length > 0
129
+ ? files.filter(f => f.endsWith('.docx') && fs.existsSync(f))
130
+ : findFiles('.docx');
131
+
132
+ // Exclude our own build outputs
133
+ let projectSlug: string | null = null;
134
+ const configPath = path.join(process.cwd(), 'rev.yaml');
135
+ if (fs.existsSync(configPath)) {
136
+ try {
137
+ const config = YAML.parse(fs.readFileSync(configPath, 'utf-8'));
138
+ if (config.title) {
139
+ projectSlug = config.title
140
+ .toLowerCase()
141
+ .replace(/[^a-z0-9]+/g, '-')
142
+ .replace(/^-|-$/g, '')
143
+ .slice(0, 50);
144
+ }
145
+ } catch (e) {
146
+ // Ignore config errors
147
+ }
148
+ }
149
+
150
+ // Filter out build outputs
151
+ if (projectSlug && (!files || files.length === 0)) {
152
+ const buildPatterns = [
153
+ `${projectSlug}.docx`,
154
+ `${projectSlug}_comments.docx`,
155
+ `${projectSlug}-changes.docx`,
156
+ 'paper.docx',
157
+ 'paper_comments.docx',
158
+ 'paper-changes.docx',
159
+ ];
160
+ const excluded: string[] = [];
161
+ docxFiles = docxFiles.filter(f => {
162
+ const base = path.basename(f).toLowerCase();
163
+ const isBuilt = buildPatterns.includes(base);
164
+ if (isBuilt) excluded.push(f);
165
+ return !isBuilt;
166
+ });
167
+ if (excluded.length > 0) {
168
+ console.log(chalk.dim(` Skipping build outputs: ${excluded.join(', ')}`));
169
+ console.log();
170
+ }
171
+ }
172
+
173
+ if (docxFiles.length === 0) {
174
+ console.log(fmt.status('info', 'No .docx files to archive.'));
175
+ return;
176
+ }
177
+
178
+ const projectTitle = projectSlug;
179
+
180
+ // Create archive folder
181
+ const archiveDir = path.resolve(options.dir || 'archive');
182
+ if (!options.dryRun && !fs.existsSync(archiveDir)) {
183
+ fs.mkdirSync(archiveDir, { recursive: true });
184
+ }
185
+
186
+ console.log(fmt.header('Archive'));
187
+ console.log();
188
+
189
+ const moved: string[] = [];
190
+ for (const file of docxFiles) {
191
+ const stat = fs.statSync(file);
192
+ const mtime = stat.mtime;
193
+ const timestamp = mtime.toISOString().slice(0, 19).replace(/[-:]/g, '').replace('T', '_');
194
+
195
+ // Determine reviewer name
196
+ let reviewer: string | null = options.by || null;
197
+ if (!reviewer && options.rename !== false) {
198
+ try {
199
+ const comments = await extractWordComments(file);
200
+ const authors = [...new Set(comments.map(c => c.author).filter(a => a && a !== 'Unknown'))];
201
+ if (authors.length === 1) {
202
+ reviewer = authors[0].replace(/[^a-zA-Z0-9]/g, '-').replace(/^-|-$/g, '');
203
+ }
204
+ } catch (e) {
205
+ // Ignore extraction errors
206
+ }
207
+ }
208
+
209
+ // Generate new name
210
+ let newName: string;
211
+ if (options.rename === false) {
212
+ newName = path.basename(file);
213
+ } else {
214
+ const base = path.basename(file, '.docx');
215
+ if (/^\d{8}_\d{6}_/.test(base)) {
216
+ newName = path.basename(file);
217
+ } else {
218
+ const namePart = projectTitle || base;
219
+ if (reviewer) {
220
+ newName = `${timestamp}_${reviewer}_${namePart}.docx`;
221
+ } else {
222
+ newName = `${timestamp}_${namePart}.docx`;
223
+ }
224
+ }
225
+ }
226
+
227
+ const destPath = path.join(archiveDir, newName);
228
+
229
+ if (options.dryRun) {
230
+ console.log(` ${chalk.dim(file)} → ${chalk.cyan(path.join(options.dir || 'archive', newName))}`);
231
+ } else {
232
+ // Handle name collision
233
+ let finalPath = destPath;
234
+ let counter = 1;
235
+ while (fs.existsSync(finalPath)) {
236
+ const ext = path.extname(newName);
237
+ const base = path.basename(newName, ext);
238
+ finalPath = path.join(archiveDir, `${base}_${counter}${ext}`);
239
+ counter++;
240
+ }
241
+ fs.renameSync(file, finalPath);
242
+ console.log(` ${chalk.dim(file)} → ${chalk.green(path.relative(process.cwd(), finalPath))}`);
243
+ }
244
+ moved.push(file);
245
+ }
246
+
247
+ console.log();
248
+ if (options.dryRun) {
249
+ console.log(fmt.status('info', `Would archive ${moved.length} file(s). Run without --dry-run to proceed.`));
250
+ } else {
251
+ console.log(fmt.status('success', `Archived ${moved.length} file(s) to ${options.dir || 'archive'}/`));
252
+ }
253
+ });
254
+
255
+ // ==========================================================================
256
+ // EXPORT command - Export project as distributable zip
257
+ // ==========================================================================
258
+
259
+ program
260
+ .command('export')
261
+ .description('Export project as distributable zip')
262
+ .option('-o, --output <file>', 'Output filename')
263
+ .option('--include-output', 'Include built PDF/DOCX files')
264
+ .action(async (options: ExportOptions) => {
265
+ const { default: AdmZip } = await import('adm-zip');
266
+ const { build } = await import('../build.js');
267
+
268
+ let config: Partial<BuildConfig> = {};
269
+ try {
270
+ config = loadBuildConfig('.') || {};
271
+ } catch {
272
+ // Not in a rev project, that's ok
273
+ }
274
+
275
+ // Build first if including output
276
+ if (options.includeOutput) {
277
+ console.log(chalk.dim('Building documents...'));
278
+ await build('.', ['pdf', 'docx']);
279
+ }
280
+
281
+ const zip = new AdmZip();
282
+ const projectName = config.title?.replace(/[^a-zA-Z0-9]/g, '-').toLowerCase() || 'project';
283
+ const outputPath = options.output || `${projectName}-export.zip`;
284
+
285
+ const exclude = ['node_modules', '.git', '.DS_Store', '*.zip'];
286
+
287
+ const shouldInclude = (name: string): boolean => {
288
+ if (!options.includeOutput && (name.endsWith('.pdf') || name.endsWith('.docx'))) {
289
+ return false;
290
+ }
291
+ for (const pattern of exclude) {
292
+ if (name === pattern || name.includes(pattern.replace('*', ''))) return false;
293
+ }
294
+ return true;
295
+ };
296
+
297
+ addDirToZip(zip, '.', shouldInclude);
298
+
299
+ zip.writeZip(outputPath);
300
+ console.log(fmt.status('success', `Exported: ${outputPath}`));
301
+ });
302
+
303
+ // ==========================================================================
304
+ // CLEAN command - Remove generated files
305
+ // ==========================================================================
306
+
307
+ program
308
+ .command('clean')
309
+ .description('Remove generated files (paper.md, PDFs, DOCXs)')
310
+ .option('-n, --dry-run', 'Show what would be deleted without deleting')
311
+ .option('--all', 'Also remove backup and export zips')
312
+ .action((options: CleanOptions) => {
313
+ let config: Partial<BuildConfig> = {};
314
+ try {
315
+ config = loadBuildConfig('.') || {};
316
+ } catch {
317
+ // Not in a rev project, that's ok
318
+ }
319
+
320
+ const projectName = config.title?.toLowerCase().replace(/\s+/g, '-') || 'paper';
321
+
322
+ // Files to clean
323
+ const patterns = [
324
+ 'paper.md',
325
+ '*.pdf',
326
+ `${projectName}.docx`,
327
+ `${projectName}.pdf`,
328
+ `${projectName}.tex`,
329
+ '.paper-*.md', // Temp build files
330
+ ];
331
+
332
+ if (options.all) {
333
+ patterns.push('*.zip', 'backup-*.zip', '*-export.zip');
334
+ }
335
+
336
+ const toDelete: string[] = [];
337
+
338
+ for (const pattern of patterns) {
339
+ if (pattern.includes('*')) {
340
+ const regex = new RegExp('^' + pattern.replace(/\./g, '\\.').replace(/\*/g, '.*') + '$');
341
+ const files = fs.readdirSync('.').filter(f => regex.test(f));
342
+ toDelete.push(...files);
343
+ } else if (fs.existsSync(pattern)) {
344
+ toDelete.push(pattern);
345
+ }
346
+ }
347
+
348
+ if (toDelete.length === 0) {
349
+ console.log(chalk.dim('No generated files to clean.'));
350
+ return;
351
+ }
352
+
353
+ console.log(fmt.header('Clean'));
354
+ console.log();
355
+
356
+ for (const file of toDelete) {
357
+ if (options.dryRun) {
358
+ console.log(chalk.dim(` Would delete: ${file}`));
359
+ } else {
360
+ fs.unlinkSync(file);
361
+ console.log(chalk.red(` Deleted: ${file}`));
362
+ }
363
+ }
364
+
365
+ console.log();
366
+ if (options.dryRun) {
367
+ console.log(chalk.dim(`Would delete ${toDelete.length} file(s). Run without --dry-run to delete.`));
368
+ } else {
369
+ console.log(fmt.status('success', `Cleaned ${toDelete.length} file(s)`));
370
+ }
371
+ });
372
+ }