daftari 1.30.0 → 1.31.0

package/dist/curation/tier2.js

@@ -0,0 +1,182 @@
+// Tier 2 of tiered compatibility checking (#232) — the semantic residual,
+// as a QUEUE the server prepares and a VERDICT the server records. The
+// expensive judge itself is the CALLING AGENT: daftari has no LLM, by
+// design. The pattern is the same as earned edges (observeEdge) and
+// tension logging (vault_tension_log) — agents do the semantic work,
+// the server types it, stores it, and derives consequences.
+//
+// The queue IS #234's pending-unchecked staleness class, minus pairs a
+// recorded verdict already covers: declared and earned edges whose upstream
+// changed but whose compatibility structure cannot decide — exactly what
+// the through-line spec routes to "the expensive judges". Compiled edges
+// never queue (tier 1 decides them mechanically, and a semantic opinion
+// must not override mechanical certainty).
+//
+// Constrained input, per the #232 issue: not "do these two documents
+// conflict" but (unit, dependent, edge class, per-field before/after since
+// the edge's baseline, the dependent's usage span) — a specific claim
+// against a specific usage. Output is typed per the existing tension
+// taxonomy: a `broken` verdict names a LoggableTensionKind and is logged
+// as a real tension through addTension; `still-valid` records the
+// certified-compatible judgment.
+//
+// The verdict store (.daftari/tier2-verdicts.jsonl) is append-only local
+// state, git-ignored — the tension log is the durable, caller-visible
+// artifact of a break; the verdict log is what keeps the queue honest.
+// Verdicts, unlike tier-1 classes, MUST be stored: they are expensive LLM
+// judgments that cannot be recomputed at query time. Staleness protects
+// them from going stale: a verdict covers a pair only up to the unit
+// change it judged (judged_change_ts); a newer landed write to the unit
+// re-queues the pair automatically.
+import { mkdirSync } from "node:fs";
+import { appendFile, readFile } from "node:fs/promises";
+import { join } from "node:path";
+import { err, ok } from "../frontmatter/types.js";
+// Sentinel change timestamp for a unit with no provenance history at all: a
+// verdict on such a pair judges "the dependency as it stands", and any
+// later landed write to the unit (whose real timestamp is necessarily
+// greater) re-queues it.
+export const NO_CHANGE_TS = "1970-01-01T00:00:00.000Z";
+export const TIER2_VERDICT_KINDS = ["still-valid", "broken"];
+export function tier2VerdictsPath(vaultRoot) {
+    return join(vaultRoot, ".daftari", "tier2-verdicts.jsonl");
+}
+export async function recordTier2Verdict(vaultRoot, entry) {
+    const full = {
+        timestamp: entry.timestamp ?? new Date().toISOString(),
+        artifact: entry.artifact,
+        unit: entry.unit,
+        edge_class: entry.edge_class,
+        judged_change_ts: entry.judged_change_ts,
+        verdict: entry.verdict,
+        ...(entry.tension_kind ? { tension_kind: entry.tension_kind } : {}),
+        ...(entry.tension_id ? { tension_id: entry.tension_id } : {}),
+        reasoning: entry.reasoning,
+        agent: entry.agent,
+        ...(entry.principal ? { principal: entry.principal } : {}),
+        ...(entry.run_id ? { run_id: entry.run_id } : {}),
+    };
+    try {
+        mkdirSync(join(vaultRoot, ".daftari"), { recursive: true });
+        await appendFile(tier2VerdictsPath(vaultRoot), `${JSON.stringify(full)}\n`);
+        return ok(full);
+    }
+    catch (e) {
+        const reason = e instanceof Error ? e.message : String(e);
+        return err(new Error(`cannot append tier-2 verdict: ${reason}`));
+    }
+}
+// Oldest first; missing log is empty; corrupt lines skipped.
+export async function readTier2Verdicts(vaultRoot) {
+    let raw;
+    try {
+        raw = await readFile(tier2VerdictsPath(vaultRoot), "utf-8");
+    }
+    catch (e) {
+        if (e.code === "ENOENT")
+            return ok([]);
+        const reason = e instanceof Error ? e.message : String(e);
+        return err(new Error(`cannot read tier-2 verdicts: ${reason}`));
+    }
+    const entries = [];
+    for (const line of raw.split("\n")) {
+        const trimmed = line.trim();
+        if (!trimmed)
+            continue;
+        try {
+            const parsed = JSON.parse(trimmed);
+            if (typeof parsed.artifact === "string" && typeof parsed.unit === "string") {
+                entries.push(parsed);
+            }
+        }
+        catch {
+            // Skip a corrupt line; the log is append-only and best-effort.
+        }
+    }
+    return ok(entries);
+}
+// The unit's latest landed content write — the change identity a verdict
+// judges. Null when the unit has no provenance at all.
+export function latestUnitChangeTs(provenance, unit) {
+    let latest = null;
+    for (const e of provenance) {
+        if (e.file !== unit || e.action === "rejected_stale")
+            continue;
+        if (latest === null || e.timestamp > latest)
+            latest = e.timestamp;
+    }
+    return latest;
+}
+// The verdict currently in force for a pair, if any: the newest recorded
+// verdict whose judged_change_ts is not older than the unit's latest landed
+// write. An older judgment (the unit changed again) covers nothing.
+export function coveringVerdict(verdicts, input) {
+    let found = null;
+    for (const v of verdicts) {
+        if (v.artifact !== input.artifact || v.unit !== input.unit)
+            continue;
+        if (v.edge_class !== input.edgeClass)
+            continue;
+        if (v.judged_change_ts < input.latestChangeTs)
+            continue; // stale judgment
+        if (found === null || v.timestamp > found.timestamp)
+            found = v;
+    }
+    return found;
+}
+export function accumulateFieldChanges(provenance, unit, baseline) {
+    const changes = {};
+    let bodyChanged = false;
+    for (const e of provenance) {
+        if (e.file !== unit || e.action === "rejected_stale" || e.timestamp <= baseline)
+            continue;
+        for (const [field, diff] of Object.entries(e.frontmatter_diff ?? {})) {
+            const existing = changes[field];
+            if (existing)
+                existing.after = diff.after;
+            else
+                changes[field] = { before: diff.before, after: diff.after };
+        }
+        if (e.body_changed ?? (e.action === "create" || e.action === "update" || e.action === "append"))
+            bodyChanged = true;
+    }
+    if (bodyChanged)
+        changes.body = { before: null, after: null };
+    return changes;
+}
+// Best-effort usage-span extraction: the lines of the dependent's body that
+// mention the unit (by path, basename, or title), each with one line of
+// context, capped. Null when nothing matches — the judge then reads the
+// dependent in full via vault_read.
+export function extractUsageSpan(artifactBody, unit) {
+    const needles = [unit.path, unit.path.split("/").pop() ?? "", unit.title ?? ""]
+        .map((n) => n.trim().toLowerCase())
+        .filter((n) => n.length > 2);
+    if (needles.length === 0)
+        return null;
+    const lines = artifactBody.split("\n");
+    const keep = new Set();
+    for (let i = 0; i < lines.length; i++) {
+        const lower = lines[i]?.toLowerCase() ?? "";
+        if (needles.some((n) => lower.includes(n))) {
+            for (const j of [i - 1, i, i + 1]) {
+                if (j >= 0 && j < lines.length)
+                    keep.add(j);
+            }
+        }
+    }
+    if (keep.size === 0)
+        return null;
+    const ordered = [...keep].sort((a, b) => a - b);
+    const parts = [];
+    let prev = -2;
+    for (const i of ordered) {
+        if (i > prev + 1 && parts.length > 0)
+            parts.push("…");
+        parts.push(lines[i] ?? "");
+        prev = i;
+    }
+    const span = parts.join("\n");
+    return span.length > 1200 ? `${span.slice(0, 1200)}…` : span;
+}
+//# sourceMappingURL=tier2.js.map

package/dist/curation/tier2.js.map

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package/dist/curation/vault-docs.d.ts

@@ -8,8 +8,12 @@ export interface LoadedDoc {
 export declare function loadDocuments(vaultRoot: string): Promise<Result<LoadedDoc[], Error>>;
 export declare function extractLinks(content: string): string[];
 export declare function resolveLink(rawTarget: string, fromPath: string, byPath: Set<string>, byBasename: Map<string, string>): string | null;
-export declare function buildPathIndexes(docs: LoadedDoc[]): {
+export declare function buildPathIndexes(docs: Pick<LoadedDoc, "path">[]): {
     byPath: Set<string>;
     byBasename: Map<string, string>;
 };
+export declare function outgoingLinkTargets(content: string, fromPath: string, indexes: {
+    byPath: Set<string>;
+    byBasename: Map<string, string>;
+}): string[];
 //# sourceMappingURL=vault-docs.d.ts.map

package/dist/curation/vault-docs.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"vault-docs.d.ts","sourceRoot":"","sources":["../../src/curation/vault-docs.ts"],"names":[],"mappings":"AAUA,OAAO,EAAE,KAAK,WAAW,EAAM,KAAK,MAAM,EAAE,KAAK,gBAAgB,EAAE,MAAM,yBAAyB,CAAC;AAGnG,MAAM,WAAW,SAAS;IACxB,IAAI,EAAE,MAAM,CAAC;IACb,WAAW,EAAE,WAAW,CAAC;IACzB,OAAO,EAAE,MAAM,CAAC;IAOhB,UAAU,EAAE,gBAAgB,CAAC;CAC9B;AAKD,wBAAsB,aAAa,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,SAAS,EAAE,EAAE,KAAK,CAAC,CAAC,CAoB1F;AAID,wBAAgB,YAAY,CAAC,OAAO,EAAE,MAAM,GAAG,MAAM,EAAE,CAiBtD;AAMD,wBAAgB,WAAW,CACzB,SAAS,EAAE,MAAM,EACjB,QAAQ,EAAE,MAAM,EAChB,MAAM,EAAE,GAAG,CAAC,MAAM,CAAC,EACnB,UAAU,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,GAC9B,MAAM,GAAG,IAAI,CAYf;AAMD,wBAAgB,gBAAgB,CAAC,IAAI,EAAE,IAAI,CAAC,SAAS,EAAE,MAAM,CAAC,EAAE,GAAG;IACjE,MAAM,EAAE,GAAG,CAAC,MAAM,CAAC,CAAC;IACpB,UAAU,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;CACjC,CAQA;AAOD,wBAAgB,mBAAmB,CACjC,OAAO,EAAE,MAAM,EACf,QAAQ,EAAE,MAAM,EAChB,OAAO,EAAE;IAAE,MAAM,EAAE,GAAG,CAAC,MAAM,CAAC,CAAC;IAAC,UAAU,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAA;CAAE,GAChE,MAAM,EAAE,CAOV"}

package/dist/curation/vault-docs.js

@@ -88,4 +88,18 @@ export function buildPathIndexes(docs) {
     }
     return { byPath, byBasename };
 }
+// The distinct resolved in-vault link targets of one document body, given the
+// known-path universe — the producer side of the materialized inbound-link
+// graph (#8, index-db.ts doc_links). Uses the SAME extraction and resolution
+// as lint's buildInboundMap, so the inline orphan / deprecated-still-linked
+// surfaces can never drift from the vault-global lint findings.
+export function outgoingLinkTargets(content, fromPath, indexes) {
+    const out = new Set();
+    for (const raw of extractLinks(content)) {
+        const target = resolveLink(raw, fromPath, indexes.byPath, indexes.byBasename);
+        if (target && target !== fromPath)
+            out.add(target);
+    }
+    return [...out];
+}
 //# sourceMappingURL=vault-docs.js.map

package/dist/curation/vault-docs.js.map

@@ -1 +1 @@
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+{"version":3,"file":"vault-docs.js","sourceRoot":"","sources":["../../src/curation/vault-docs.ts"],"names":[],"mappings":"AAAA,2DAA2D;AAC3D,EAAE;AACF,8EAA8E;AAC9E,yEAAyE;AACzE,4EAA4E;AAC5E,2EAA2E;AAC3E,qBAAqB;AAErB,OAAO,EAAE,KAAK,EAAE,MAAM,WAAW,CAAC;AAClC,OAAO,EAAE,aAAa,EAAE,MAAM,0BAA0B,CAAC;AACzD,OAAO,EAAoB,EAAE,EAAsC,MAAM,yBAAyB,CAAC;AACnG,OAAO,EAAE,SAAS,EAAE,QAAQ,EAAE,gBAAgB,EAAE,MAAM,qBAAqB,CAAC;AAe5E,0EAA0E;AAC1E,4EAA4E;AAC5E,8EAA8E;AAC9E,MAAM,CAAC,KAAK,UAAU,aAAa,CAAC,SAAiB;IACnD,MAAM,IAAI,GAAG,MAAM,SAAS,CAAC,SAAS,CAAC,CAAC;IACxC,IAAI,CAAC,IAAI,CAAC,EAAE;QAAE,OAAO,IAAI,CAAC;IAE1B,MAAM,IAAI,GAAgB,EAAE,CAAC;IAC7B,KAAK,MAAM,OAAO,IAAI,IAAI,CAAC,KAAK,EAAE,CAAC;QACjC,MAAM,QAAQ,GAAG,gBAAgB,CAAC,SAAS,EAAE,OAAO,CAAC,CAAC;QACtD,IAAI,CAAC,QAAQ,CAAC,EAAE;YAAE,SAAS;QAC3B,MAAM,IAAI,GAAG,MAAM,QAAQ,CAAC,QAAQ,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QACpD,IAAI,CAAC,IAAI,CAAC,EAAE;YAAE,SAAS;QACvB,MAAM,MAAM,GAAG,aAAa,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;QACzC,IAAI,CAAC,MAAM,CAAC,EAAE;YAAE,SAAS;QACzB,IAAI,CAAC,IAAI,CAAC;YACR,IAAI,EAAE,OAAO;YACb,WAAW,EAAE,MAAM,CAAC,KAAK,CAAC,WAAW;YACrC,OAAO,EAAE,MAAM,CAAC,KAAK,CAAC,OAAO;YAC7B,UAAU,EAAE,MAAM,CAAC,KAAK,CAAC,UAAU;SACpC,CAAC,CAAC;IACL,CAAC;IACD,OAAO,EAAE,CAAC,IAAI,CAAC,CAAC;AAClB,CAAC;AAED,8EAA8E;AAC9E,4EAA4E;AAC5E,MAAM,UAAU,YAAY,CAAC,OAAe;IAC1C,MAAM,OAAO,GAAa,EAAE,CAAC;IAE7B,KAAK,MAAM,CAAC,IAAI,OAAO,CAAC,QAAQ,CAAC,mBAAmB,CAAC,EAAE,CAAC;QACtD,kEAAkE;QAClE,MAAM,GAAG,GAAI,CAAC,CAAC,CAAC,CAAY,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,EAAE,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,EAAE,IAAI,EAAE,CAAC;QAClE,IAAI,GAAG;YAAE,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;IAC7B,CAAC;IAED,KAAK,MAAM,CAAC,IAAI,OAAO,CAAC,QAAQ,CAAC,0BAA0B,CAAC,EAAE,CAAC;QAC7D,MAAM,GAAG,GAAI,CAAC,CAAC,CAAC,CAAY,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,EAAE,IAAI,EAAE,CAAC;QACnD,IAAI,CAAC,GAAG;YAAE,SAAS;QACnB,IAAI,uBAAuB,CAAC,IAAI,CAAC,GAAG,CAAC;YAAE,SAAS;QAChD,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;IACpB,CAAC;IAED,OAAO,OAAO,CAAC;AACjB,CAAC;AAED,4EAA4E;AAC5E,0EAA0E;AAC1E,4EAA4E;AAC5E,uCAAuC;AACvC,MAAM,UAAU,WAAW,CACzB,SAAiB,EACjB,QAAgB,EAChB,MAAmB,EACnB,UAA+B;IAE/B,MAAM,MAAM,GAAG,CAAC,CAAS,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;IAElE,IAAI,MAAM,CAAC,GAAG,CAAC,SAAS,CAAC;QAAE,OAAO,SAAS,CAAC;IAC5C,IAAI,MAAM,CAAC,GAAG,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC;QAAE,OAAO,MAAM,CAAC,SAAS,CAAC,CAAC;IAE5D,MAAM,MAAM,GAAG,KAAK,CAAC,SAAS,CAAC,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,QAAQ,CAAC,EAAE,SAAS,CAAC,CAAC,CAAC;IAC/E,IAAI,MAAM,CAAC,GAAG,CAAC,MAAM,CAAC;QAAE,OAAO,MAAM,CAAC;IACtC,IAAI,MAAM,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;QAAE,OAAO,MAAM,CAAC,MAAM,CAAC,CAAC;IAEtD,MAAM,IAAI,GAAG,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAC,OAAO,CAAC,OAAO,EAAE,EAAE,CAAC,CAAC;IAC5D,OAAO,UAAU,CAAC,GAAG,CAAC,IAAI,CAAC,IAAI,IAAI,CAAC;AACtC,CAAC;AAED,2EAA2E;AAC3E,sEAAsE;AACtE,uEAAuE;AACvE,6BAA6B;AAC7B,MAAM,UAAU,gBAAgB,CAAC,IAA+B;IAI9D,MAAM,MAAM,GAAG,IAAI,GAAG,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC;IAChD,MAAM,UAAU,GAAG,IAAI,GAAG,EAAkB,CAAC;IAC7C,KAAK,MAAM,CAAC,IAAI,IAAI,EAAE,CAAC;QACrB,MAAM,IAAI,GAAG,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,OAAO,CAAC,OAAO,EAAE,EAAE,CAAC,CAAC;QACzD,IAAI,CAAC,UAAU,CAAC,GAAG,CAAC,IAAI,CAAC;YAAE,UAAU,CAAC,GAAG,CAAC,IAAI,EAAE,CAAC,CAAC,IAAI,CAAC,CAAC;IAC1D,CAAC;IACD,OAAO,EAAE,MAAM,EAAE,UAAU,EAAE,CAAC;AAChC,CAAC;AAED,8EAA8E;AAC9E,2EAA2E;AAC3E,6EAA6E;AAC7E,4EAA4E;AAC5E,gEAAgE;AAChE,MAAM,UAAU,mBAAmB,CACjC,OAAe,EACf,QAAgB,EAChB,OAAiE;IAEjE,MAAM,GAAG,GAAG,IAAI,GAAG,EAAU,CAAC;IAC9B,KAAK,MAAM,GAAG,IAAI,YAAY,CAAC,OAAO,CAAC,EAAE,CAAC;QACxC,MAAM,MAAM,GAAG,WAAW,CAAC,GAAG,EAAE,QAAQ,EAAE,OAAO,CAAC,MAAM,EAAE,OAAO,CAAC,UAAU,CAAC,CAAC;QAC9E,IAAI,MAAM,IAAI,MAAM,KAAK,QAAQ;YAAE,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;IACrD,CAAC;IACD,OAAO,CAAC,GAAG,GAAG,CAAC,CAAC;AAClB,CAAC"}

package/dist/eval/generate.js

@@ -95,9 +95,13 @@ function extractQuestions(parsed) {
 // Validates each raw question and maps survivors to `Question` records with a
 // stable id and origin "generated". Reused for both the first call and the
 // top-up call. Rejects: bad tier, empty question/answer, empty or
-// out-of-subgraph expected_sources, and trivial yes/no answers.
+// out-of-subgraph expected_sources, trivial answers (see isTrivial), and
+// intra-call duplicates — two byte-identical questions from one generator
+// call hash to the same id, and both surviving would inflate
+// tier_counts_produced (#102).
 function validateAndMap(rawQuestions, validNodes) {
     const out = [];
+    const seen = new Set();
     for (const raw of rawQuestions) {
         if (typeof raw !== "object" || raw === null)
             continue;
@@ -117,11 +121,15 @@ function validateAndMap(rawQuestions, validNodes) {
             continue;
         if (!sources.every((s) => typeof s === "string" && validNodes.has(s)))
             continue;
-        if (isTrivial(question, answer))
+        if (isTrivial(tier, answer))
             continue;
         const expectedSources = sources;
+        const id = questionId(tier, question, expectedSources);
+        if (seen.has(id))
+            continue;
+        seen.add(id);
         out.push({
-            id: questionId(tier, question, expectedSources),
+            id,
             tier,
             question,
             expected_answer: answer,
@@ -188,9 +196,18 @@ function renderTopUpPrompt(sg, shortfall) {
         .join(" and ");
     return `Subgraph docs:\n\n${docs}\n\nYou previously produced too few of some tiers. Produce exactly ${wanted} questions, same rules. Do not produce any other tiers.`;
 }
-function isTrivial(_question, answer) {
+// Bare yes/no answers are trivial on every tier. The length floor is
+// tier-aware (#102): retrieval questions legitimately have short factual
+// answers ("3", "$5", "EU") that a flat < 3 cutoff silently discarded, while
+// cross_reference/contradiction answers that short cannot possibly relate two
+// documents and keep the stricter floor.
+function isTrivial(tier, answer) {
     const a = answer.trim().toLowerCase();
-    return a === "yes" || a === "no" || a.length < 3;
+    if (a === "yes" || a === "no")
+        return true;
+    if (tier === "retrieval")
+        return false;
+    return a.length < 3;
 }
 function questionId(tier, question, sources) {
     const h = createHash("sha256");

package/dist/eval/generate.js.map

@@ -1 +1 @@
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package/dist/eval/index.d.ts.map

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