daftari 1.19.0 → 1.21.0

package/dist/storage/index-db.js

@@ -111,6 +111,20 @@ CREATE TABLE IF NOT EXISTS staged_actions (
 CREATE INDEX IF NOT EXISTS idx_staged_status ON staged_actions(status);
 CREATE INDEX IF NOT EXISTS idx_staged_target ON staged_actions(target_path);
 CREATE INDEX IF NOT EXISTS idx_staged_expires ON staged_actions(expires_at);
+CREATE TABLE IF NOT EXISTS derives_from_edges (
+  from_path      TEXT NOT NULL,
+  to_path        TEXT NOT NULL,
+  strength       REAL NOT NULL,
+  k_survived     INTEGER NOT NULL,
+  first_observed TEXT NOT NULL,
+  last_rederived TEXT NOT NULL,
+  last_age_decay TEXT NOT NULL,
+  status         TEXT NOT NULL,
+  PRIMARY KEY (from_path, to_path)
+);
+CREATE INDEX IF NOT EXISTS idx_edges_from ON derives_from_edges(from_path);
+CREATE INDEX IF NOT EXISTS idx_edges_to ON derives_from_edges(to_path);
+CREATE INDEX IF NOT EXISTS idx_edges_status ON derives_from_edges(status);
 `;
 // FTS5 virtual table over the `documents` body + title + tags. The
 // `content='documents'` link is a "contentless" external-content FTS5
@@ -286,7 +300,10 @@ export function openIndexDb(vaultRoot, expectedVecDim) {
             // additions (3 → 4 added embeddings.dim) and virtual-table creations
             // (4 → 5 added documents_fts + embeddings_vec) against existing rows;
             // the markdown files are the source of truth and the index is cheap to
-            // regenerate.
+            // regenerate. staged_actions and derives_from_edges are not in the drop
+            // list — they are jsonl-derived and clear-and-rebuilt by their own
+            // materialize paths — but a future bump that changes THEIR columns must
+            // add them here (CREATE IF NOT EXISTS will not alter an existing table).
             db.exec("DROP TRIGGER IF EXISTS documents_ai;" +
                 "DROP TRIGGER IF EXISTS documents_ad;" +
                 "DROP TRIGGER IF EXISTS documents_au;" +
@@ -577,4 +594,29 @@ export function getStagedActionsByStatus(db, status) {
         .prepare("SELECT * FROM staged_actions WHERE status = ? ORDER BY expires_at")
         .all(status);
 }
+// Inserts or replaces an edge row by (from_path, to_path). Used by the
+// jsonl→sqlite rebuild.
+export function upsertDerivesFromEdge(db, row) {
+    db.prepare(`INSERT INTO derives_from_edges
+       (from_path, to_path, strength, k_survived, first_observed, last_rederived,
+        last_age_decay, status)
+     VALUES (?, ?, ?, ?, ?, ?, ?, ?)
+     ON CONFLICT(from_path, to_path) DO UPDATE SET
+       strength       = excluded.strength,
+       k_survived     = excluded.k_survived,
+       first_observed = excluded.first_observed,
+       last_rederived = excluded.last_rederived,
+       last_age_decay = excluded.last_age_decay,
+       status         = excluded.status`).run(row.from_path, row.to_path, row.strength, row.k_survived, row.first_observed, row.last_rederived, row.last_age_decay, row.status);
+}
+// Drops every edge row. Called at the start of a rebuild so a reindex never
+// leaves rows for edges the jsonl no longer reflects.
+export function clearDerivesFromEdges(db) {
+    db.exec("DELETE FROM derives_from_edges;");
+}
+export function getAllDerivesFromEdges(db) {
+    return db
+        .prepare("SELECT * FROM derives_from_edges ORDER BY from_path, to_path")
+        .all();
+}
 //# sourceMappingURL=index-db.js.map

package/dist/storage/index-db.js.map

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package/dist/tools/curation.d.ts

@@ -1,6 +1,7 @@
 import { type AccessContext } from "../access/rbac.js";
 import { type LintCheckName, type LintFinding, type StagedActionLintItem, type TensionHealth } from "../curation/lint.js";
 import { type ProvenanceEntry } from "../curation/provenance.js";
+import type { ShadowLintSummary } from "../curation/shadow.js";
 import { type TensionEntry } from "../curation/tension.js";
 import { type TensionBlastResult } from "../curation/tension-blast.js";
 import { type TensionClustersResult } from "../curation/tension-clusters.js";
@@ -17,6 +18,7 @@ export interface VaultLintResult {
     totalFindings: number;
     tensionHealth: TensionHealth;
     stagedActions: StagedActionLintItem[];
+    shadowActions: ShadowLintSummary;
 }
 export declare function vaultLint(vaultRoot: string, args?: Record<string, unknown>, access?: AccessContext): Promise<Result<VaultLintResult, Error>>;
 export interface VaultProvenanceResult {

package/dist/tools/curation.d.ts.map

@@ -1 +1 @@
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package/dist/tools/curation.js

@@ -222,6 +222,7 @@ export async function vaultLint(vaultRoot, args = {}, access) {
             totalFindings: findings.length,
             tensionHealth: report.value.tensionHealth,
             stagedActions: report.value.stagedActions,
+            shadowActions: report.value.shadowActions,
         });
     }
     return ok({
@@ -231,6 +232,7 @@ export async function vaultLint(vaultRoot, args = {}, access) {
         totalFindings: report.value.totalFindings,
         tensionHealth: report.value.tensionHealth,
         stagedActions: report.value.stagedActions,
+        shadowActions: report.value.shadowActions,
     });
 }
 // Returns the write history of a single document, oldest entry first, read
@@ -410,7 +412,9 @@ export const curationTools = [
             "ones, and questions raised but unanswered anywhere in the vault. " +
             "Also reports tension health (counts by kind and resolution kind, " +
             "stable acknowledged persistent disagreements, and legacy unspecified " +
-            "entries) and lists pending staged actions awaiting ratification. " +
+            "entries), lists pending staged actions awaiting ratification, and — " +
+            "when the vault has run shadow_mode — summarizes shadow-logged writes " +
+            "with the ones the trust budget would have gated. " +
             "Never auto-fixes vault content; it does, as housekeeping, expire " +
             "staged actions past their TTL. Optionally filter to a single check.",
         inputSchema: {

package/dist/tools/curation.js.map

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package/dist/tools/edges.d.ts

@@ -0,0 +1,17 @@
+import { type AccessContext } from "../access/rbac.js";
+import { type DerivesFromEdge } from "../curation/edges.js";
+import { type Result } from "../frontmatter/types.js";
+import type { ToolDefinition } from "./read.js";
+export declare function vaultEdgeObserve(vaultRoot: string, args: Record<string, unknown>, access?: AccessContext): Promise<Result<DerivesFromEdge, Error>>;
+export interface ContestResult {
+    edge: DerivesFromEdge;
+    tension_id: string | undefined;
+}
+export declare function vaultEdgeContest(vaultRoot: string, args: Record<string, unknown>, access?: AccessContext): Promise<Result<ContestResult, Error>>;
+export interface EdgesResult {
+    edges: DerivesFromEdge[];
+    total: number;
+}
+export declare function vaultEdges(vaultRoot: string, args: Record<string, unknown>, access?: AccessContext): Promise<Result<EdgesResult, Error>>;
+export declare const edgeTools: ToolDefinition[];
+//# sourceMappingURL=edges.d.ts.map

package/dist/tools/edges.d.ts.map

@@ -0,0 +1 @@
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package/dist/tools/edges.js

@@ -0,0 +1,351 @@
+// derives_from edge tools: vault_edge_observe (producer), vault_edge_contest
+// (case-2 contest-and-revoke), vault_edges (read). Spec §11.3 — the earned
+// re-derivation graph of the cortex loop.
+//
+// vault_edge_observe records a (re-)derivation sighting an edge. In v1 the
+// matcher/loop that would normally call it does not exist yet, so the tool is
+// exposed over MCP mainly for testing and for the future loop — the same
+// posture vault_stage_action takes.
+//
+// vault_edge_contest records a case-2 contradiction (a re-derivation failed
+// with NO upstream change): the edge drops to `revoked` AND a tension is
+// logged — surface, don't silently decrement (strength-Q4). The tension is
+// written first: a tension pointing at a still-live edge is harmless advisory
+// noise, but a silent revoke is the exact failure mode the design forbids.
+//
+// RBAC: observe and the read tool gate on hasAnyRead, the curation-surface
+// posture (matching vault_tension_log / vault_stage_action). Contest gates on
+// the `ratify` grant (§11.6) — it revokes trigger-bearing edges, the same
+// curation-verdict tier as vault_ratify.
+import { relative, resolve } from "node:path";
+import { canRatify, hasAnyRead } from "../access/rbac.js";
+import { contestEdge, EDGE_AXES, EDGE_STATUSES, getEdge, listEdges, observeEdge, } from "../curation/edges.js";
+import { addTension, listTensions } from "../curation/tension.js";
+import { err, ok } from "../frontmatter/types.js";
+import { readFile, resolveVaultPath } from "../storage/local.js";
+// Canonical vault-relative form of a caller-supplied path: trimmed, resolved
+// against the vault root (rejecting traversal out of it), re-relativized. The
+// edge store keys edges by raw string, so `./a.md`, `b/../a.md`, and `a.md`
+// must all collapse to one key here — otherwise aliased inputs would split an
+// edge's votes across phantom twins and slip past the self-edge guard (the
+// same aliasing class vault_merge guards against).
+function canonicalRelPath(vaultRoot, relPath) {
+    const resolved = resolveVaultPath(vaultRoot, relPath.trim());
+    if (!resolved.ok)
+        return resolved;
+    return ok(relative(resolve(vaultRoot), resolved.value));
+}
+function requireReadAccess(tool, access) {
+    if (access && !hasAnyRead(access.role)) {
+        return err(new Error(`access denied: role '${access.roleName}' cannot use ${tool}`));
+    }
+    return ok(undefined);
+}
+function requireString(args, field, tool) {
+    const v = args[field];
+    if (typeof v !== "string" || v.trim().length === 0) {
+        return err(new Error(`${tool} requires a non-empty '${field}' argument`));
+    }
+    return ok(v);
+}
+// Fail fast on a path that does not name a real document — an edge endpoint
+// that never existed could never be re-derived (mirrors vault_stage_action's
+// stage-time target check).
+async function requireDocument(vaultRoot, relPath, tool) {
+    const resolved = resolveVaultPath(vaultRoot, relPath);
+    if (!resolved.ok)
+        return resolved;
+    const exists = await readFile(resolved.value);
+    if (!exists.ok) {
+        return err(new Error(`${tool}: document not found: ${relPath}`));
+    }
+    return ok(undefined);
+}
+// ---------------------------------------------------------------------------
+// vault_edge_observe
+// ---------------------------------------------------------------------------
+export async function vaultEdgeObserve(vaultRoot, args, access) {
+    const allowed = requireReadAccess("vault_edge_observe", access);
+    if (!allowed.ok)
+        return allowed;
+    const fromPath = requireString(args, "from_path", "vault_edge_observe");
+    if (!fromPath.ok)
+        return fromPath;
+    const toPath = requireString(args, "to_path", "vault_edge_observe");
+    if (!toPath.ok)
+        return toPath;
+    const observedBy = requireString(args, "observed_by", "vault_edge_observe");
+    if (!observedBy.ok)
+        return observedBy;
+    if (typeof args.blind !== "boolean") {
+        return err(new Error("vault_edge_observe requires a boolean 'blind' argument"));
+    }
+    let axis;
+    if (args.varied_axis !== undefined && args.varied_axis !== null) {
+        if (typeof args.varied_axis !== "string" ||
+            !EDGE_AXES.includes(args.varied_axis)) {
+            return err(new Error(`vault_edge_observe 'varied_axis' must be one of: ${EDGE_AXES.join(", ")}`));
+        }
+        axis = args.varied_axis;
+    }
+    let note;
+    if (args.note !== undefined && args.note !== null) {
+        if (typeof args.note !== "string") {
+            return err(new Error("vault_edge_observe 'note' must be a string"));
+        }
+        const trimmed = args.note.trim();
+        if (trimmed.length > 0)
+            note = trimmed;
+    }
+    const canonFrom = canonicalRelPath(vaultRoot, fromPath.value);
+    if (!canonFrom.ok)
+        return canonFrom;
+    const canonTo = canonicalRelPath(vaultRoot, toPath.value);
+    if (!canonTo.ok)
+        return canonTo;
+    // Self-edge check on the CANONICAL paths, so `a.md` vs `b/../a.md` cannot
+    // slip a self-derivation past a raw string comparison.
+    if (canonFrom.value === canonTo.value) {
+        return err(new Error("vault_edge_observe: a document cannot derive from itself"));
+    }
+    const fromExists = await requireDocument(vaultRoot, canonFrom.value, "vault_edge_observe");
+    if (!fromExists.ok)
+        return fromExists;
+    const toExists = await requireDocument(vaultRoot, canonTo.value, "vault_edge_observe");
+    if (!toExists.ok)
+        return toExists;
+    return observeEdge(vaultRoot, {
+        fromPath: canonFrom.value,
+        toPath: canonTo.value,
+        observedBy: observedBy.value,
+        blind: args.blind,
+        ...(axis !== undefined ? { axis } : {}),
+        ...(note !== undefined ? { note } : {}),
+    });
+}
+export async function vaultEdgeContest(vaultRoot, args, access) {
+    // Contest is the curation-verdict tier (§11.6): it revokes a trigger-bearing
+    // edge — destructive to the future loop's trigger graph — so it needs the
+    // explicit `ratify` grant, the same tier as approving/rejecting staged
+    // actions (this closes the gap flagged in the §11.3 review).
+    if (access && !canRatify(access.role)) {
+        return err(new Error(`access denied: role '${access.roleName}' cannot contest edges`));
+    }
+    const fromPath = requireString(args, "from_path", "vault_edge_contest");
+    if (!fromPath.ok)
+        return fromPath;
+    const toPath = requireString(args, "to_path", "vault_edge_contest");
+    if (!toPath.ok)
+        return toPath;
+    const contestedBy = requireString(args, "contested_by", "vault_edge_contest");
+    if (!contestedBy.ok)
+        return contestedBy;
+    const reason = requireString(args, "reason", "vault_edge_contest");
+    if (!reason.ok)
+        return reason;
+    // Canonicalize like observe does, so a contest addresses the same key the
+    // observation wrote. No doc-existence check here — an edge whose endpoint
+    // doc was since deleted is still contestable.
+    const canonFrom = canonicalRelPath(vaultRoot, fromPath.value);
+    if (!canonFrom.ok)
+        return canonFrom;
+    const canonTo = canonicalRelPath(vaultRoot, toPath.value);
+    if (!canonTo.ok)
+        return canonTo;
+    // Validate the edge is contestable BEFORE writing the tension, so a contest
+    // of a non-existent or already-revoked edge never leaves a junk tension.
+    const current = await getEdge(vaultRoot, canonFrom.value, canonTo.value);
+    if (!current.ok)
+        return current;
+    if (!current.value) {
+        return err(new Error(`vault_edge_contest: no such edge: ${canonFrom.value} derives_from ${canonTo.value}`));
+    }
+    if (current.value.status === "revoked") {
+        return err(new Error(`vault_edge_contest: edge already revoked: ${canonFrom.value} derives_from ${canonTo.value}`));
+    }
+    // Tension first (surface), then revoke. If the revoke fails after the
+    // tension landed, the tension stands as advisory noise — the safe side of
+    // the ordering (revoke-first would risk the silent revoke the design
+    // forbids). To keep a failed-revoke retry from stacking duplicate tensions,
+    // an unresolved tension with this exact title is reused instead of appended.
+    const title = `Contested derives_from edge: ${canonFrom.value} -> ${canonTo.value}`;
+    const existing = await listTensions(vaultRoot);
+    if (!existing.ok)
+        return existing;
+    const open = existing.value.find((t) => t.title === title && !t.resolved);
+    let tensionId;
+    if (open) {
+        tensionId = open.id;
+    }
+    else {
+        const tension = await addTension(vaultRoot, {
+            title,
+            kind: "factual",
+            sourceA: canonFrom.value,
+            claimA: `derives from ${canonTo.value} (k_survived=${current.value.kSurvived})`,
+            sourceB: canonTo.value,
+            claimB: `re-derivation failed with no upstream change — ${reason.value}`,
+            loggedBy: contestedBy.value,
+        });
+        if (!tension.ok)
+            return tension;
+        tensionId = tension.value.id;
+    }
+    const revoked = await contestEdge(vaultRoot, {
+        fromPath: canonFrom.value,
+        toPath: canonTo.value,
+        contestedBy: contestedBy.value,
+        reason: reason.value,
+    });
+    if (!revoked.ok)
+        return revoked;
+    return ok({ edge: revoked.value, tension_id: tensionId });
+}
+export async function vaultEdges(vaultRoot, args, access) {
+    const allowed = requireReadAccess("vault_edges", access);
+    if (!allowed.ok)
+        return allowed;
+    const filter = {};
+    for (const [argName, key] of [
+        ["from_path", "fromPath"],
+        ["to_path", "toPath"],
+    ]) {
+        const v = args[argName];
+        if (v === undefined || v === null)
+            continue;
+        if (typeof v !== "string" || v.trim().length === 0) {
+            return err(new Error(`vault_edges '${argName}' must be a non-empty string`));
+        }
+        const canon = canonicalRelPath(vaultRoot, v);
+        if (!canon.ok)
+            return canon;
+        filter[key] = canon.value;
+    }
+    if (args.status !== undefined && args.status !== null) {
+        if (typeof args.status !== "string" ||
+            !EDGE_STATUSES.includes(args.status)) {
+            return err(new Error(`vault_edges 'status' must be one of: ${EDGE_STATUSES.join(", ")}`));
+        }
+        filter.status = args.status;
+    }
+    const edges = await listEdges(vaultRoot, filter);
+    if (!edges.ok)
+        return edges;
+    return ok({ edges: edges.value, total: edges.value.length });
+}
+// ---------------------------------------------------------------------------
+// MCP tool definitions
+// ---------------------------------------------------------------------------
+export const edgeTools = [
+    {
+        name: "vault_edge_observe",
+        title: "Record a derives_from observation",
+        annotations: { destructiveHint: false },
+        description: "Record that a (re-)derivation observed a derives_from edge between two " +
+            "documents. The first observation seeds the edge as a zero-strength " +
+            "candidate; an edge earns strength only through later blind observations " +
+            "that vary at least one axis (prompt | input-neighborhood | model). " +
+            "Normally called by the consolidation loop, not by a human directly.",
+        inputSchema: {
+            type: "object",
+            properties: {
+                from_path: {
+                    type: "string",
+                    description: "Vault-relative path of the deriving document",
+                },
+                to_path: {
+                    type: "string",
+                    description: "Vault-relative path of the document it derives from",
+                },
+                observed_by: {
+                    type: "string",
+                    description: "Principal observing the edge, e.g. 'agent:curation-loop'",
+                },
+                blind: {
+                    type: "boolean",
+                    description: "True if this pass could not see the edge's prior existence or " +
+                        "strength. Only blind observations can count as independent votes.",
+                },
+                varied_axis: {
+                    type: "string",
+                    enum: [...EDGE_AXES],
+                    description: "Which axis this re-derivation varied versus prior passes. " +
+                        "Required for the observation to count as an independent vote.",
+                },
+                note: {
+                    type: "string",
+                    description: "Optional free-text context recorded with the observation",
+                },
+            },
+            required: ["from_path", "to_path", "observed_by", "blind"],
+            additionalProperties: false,
+        },
+        handler: (vaultRoot, args, access) => vaultEdgeObserve(vaultRoot, args, access),
+    },
+    {
+        name: "vault_edge_contest",
+        title: "Contest and revoke a derives_from edge",
+        annotations: { destructiveHint: true },
+        description: "Record a case-2 contradiction: a re-derivation failed with no upstream " +
+            "change. The edge is revoked (drops below trigger-bearing) and a tension " +
+            "is logged — contests surface loudly, never as silent decrements. A " +
+            "revoked edge can only be re-earned through fresh observations. " +
+            "Requires the role's 'ratify' grant (the curation-verdict tier).",
+        inputSchema: {
+            type: "object",
+            properties: {
+                from_path: {
+                    type: "string",
+                    description: "Vault-relative path of the deriving document",
+                },
+                to_path: {
+                    type: "string",
+                    description: "Vault-relative path of the document it claimed to derive from",
+                },
+                contested_by: {
+                    type: "string",
+                    description: "Principal contesting the edge, e.g. 'agent:curation-loop'",
+                },
+                reason: {
+                    type: "string",
+                    description: "Why the re-derivation failed (recorded on the tension)",
+                },
+            },
+            required: ["from_path", "to_path", "contested_by", "reason"],
+            additionalProperties: false,
+        },
+        handler: (vaultRoot, args, access) => vaultEdgeContest(vaultRoot, args, access),
+    },
+    {
+        name: "vault_edges",
+        title: "List derives_from edges",
+        annotations: { readOnlyHint: true },
+        description: "List derives_from edges with their live aged strength, strongest " +
+            "first. Strength = independent-vote count decayed by time since the " +
+            "last qualifying re-derivation; an edge is trigger-bearing while its " +
+            "aged strength stays above the floor. Filter by endpoint or status " +
+            "(candidate | trigger-bearing | revoked).",
+        inputSchema: {
+            type: "object",
+            properties: {
+                from_path: {
+                    type: "string",
+                    description: "Only edges whose deriving document is this path",
+                },
+                to_path: {
+                    type: "string",
+                    description: "Only edges that derive from this path",
+                },
+                status: {
+                    type: "string",
+                    enum: [...EDGE_STATUSES],
+                    description: "Only edges currently in this status",
+                },
+            },
+            required: [],
+            additionalProperties: false,
+        },
+        handler: (vaultRoot, args, access) => vaultEdges(vaultRoot, args, access),
+    },
+];
+//# sourceMappingURL=edges.js.map

package/dist/tools/edges.js.map

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