ctxo-mcp 0.2.0

package/dist/index.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/index.ts","../src/core/masking/masking-pipeline.ts","../src/adapters/mcp/get-logic-slice.ts","../src/core/graph/symbol-graph.ts","../src/core/logic-slice/logic-slice-query.ts","../src/core/detail-levels/detail-formatter.ts","../src/adapters/mcp/get-why-context.ts","../src/adapters/mcp/get-change-intelligence.ts","../src/core/change-intelligence/churn-analyzer.ts","../src/core/change-intelligence/health-scorer.ts","../src/adapters/mcp/get-blast-radius.ts","../src/core/blast-radius/blast-radius-calculator.ts","../src/adapters/mcp/get-architectural-overlay.ts","../src/core/overlay/architectural-overlay.ts"],"sourcesContent":["import { McpServer } from '@modelcontextprotocol/sdk/server/mcp.js';\nimport { StdioServerTransport } from '@modelcontextprotocol/sdk/server/stdio.js';\nimport { z } from 'zod';\nimport { existsSync, readFileSync } from 'node:fs';\nimport { join } from 'node:path';\nimport { SqliteStorageAdapter } from './adapters/storage/sqlite-storage-adapter.js';\nimport { MaskingPipeline, type MaskingPatternConfig } from './core/masking/masking-pipeline.js';\nimport { handleGetLogicSlice } from './adapters/mcp/get-logic-slice.js';\nimport { handleGetWhyContext } from './adapters/mcp/get-why-context.js';\nimport { handleGetChangeIntelligence } from './adapters/mcp/get-change-intelligence.js';\nimport { SimpleGitAdapter } from './adapters/git/simple-git-adapter.js';\nimport { handleGetBlastRadius } from './adapters/mcp/get-blast-radius.js';\nimport { handleGetArchitecturalOverlay } from './adapters/mcp/get-architectural-overlay.js';\n\nfunction loadMaskingConfig(ctxoRoot: string): MaskingPipeline {\n  const jsonConfigPath = join(ctxoRoot, 'masking.json');\n\n  // Try JSON masking config first\n  if (existsSync(jsonConfigPath)) {\n    try {\n      const raw = readFileSync(jsonConfigPath, 'utf-8');\n      const patterns: MaskingPatternConfig[] = JSON.parse(raw);\n      console.error(`[ctxo] Loaded ${patterns.length} custom masking pattern(s)`);\n      return MaskingPipeline.fromConfig(patterns);\n    } catch (err) {\n      console.error(`[ctxo] Failed to load masking config: ${(err as Error).message}`);\n    }\n  }\n\n  return new MaskingPipeline();\n}\n\nasync function main(): Promise<void> {\n  const args = process.argv.slice(2);\n\n  if (args.length > 0) {\n    // CLI mode\n    const { CliRouter } = await import('./cli/cli-router.js');\n    const router = new CliRouter(process.cwd());\n    await router.route(args);\n    return;\n  }\n\n  // Initialize adapters\n  const ctxoRoot = '.ctxo';\n  const storage = new SqliteStorageAdapter(ctxoRoot);\n  await storage.init();\n\n  const masking = loadMaskingConfig(ctxoRoot);\n  const git = new SimpleGitAdapter(process.cwd());\n\n  // Create MCP server\n  const server = new McpServer({ name: 'ctxo', version: '0.1.0' });\n\n  // Staleness detection\n  const { StalenessDetector } = await import('./core/staleness/staleness-detector.js');\n  const staleness = new StalenessDetector(process.cwd(), ctxoRoot);\n\n  // Register tools\n  const logicSliceHandler = handleGetLogicSlice(storage, masking, staleness, ctxoRoot);\n  const whyContextHandler = handleGetWhyContext(storage, git, masking, staleness, ctxoRoot);\n  const changeIntelligenceHandler = handleGetChangeIntelligence(storage, git, masking, staleness, ctxoRoot);\n\n  server.registerTool(\n    'get_logic_slice',\n    {\n      description: 'Retrieve a Logic-Slice for a named symbol — the symbol plus all transitive dependencies',\n      inputSchema: {\n        symbolId: z.string().optional().describe('Single symbol ID (format: file::name::kind)'),\n        symbolIds: z.array(z.string()).optional().describe('Batch: array of symbol IDs'),\n        level: z.number().min(1).max(4).optional().default(3).describe('Detail level (L1=signature, L2=direct deps, L3=full closure, L4=with token budget)'),\n      },\n    },\n    (args) => logicSliceHandler(args),\n  );\n\n  server.registerTool(\n    'get_why_context',\n    {\n      description: 'Retrieve git commit intent, anti-pattern warnings from revert history for a symbol',\n      inputSchema: {\n        symbolId: z.string().min(1).describe('The symbol ID (format: file::name::kind)'),\n      },\n    },\n    (args) => whyContextHandler(args),\n  );\n\n  server.registerTool(\n    'get_change_intelligence',\n    {\n      description: 'Retrieve complexity x churn composite score for a symbol',\n      inputSchema: {\n        symbolId: z.string().min(1).describe('The symbol ID (format: file::name::kind)'),\n      },\n    },\n    (args) => changeIntelligenceHandler(args),\n  );\n\n  const blastRadiusHandler = handleGetBlastRadius(storage, masking, staleness, ctxoRoot);\n\n  server.registerTool(\n    'get_blast_radius',\n    {\n      description: 'Retrieve the blast radius for a symbol — symbols that would break if it changed',\n      inputSchema: {\n        symbolId: z.string().min(1).describe('The symbol ID (format: file::name::kind)'),\n      },\n    },\n    (args) => blastRadiusHandler(args),\n  );\n\n  const overlayHandler = handleGetArchitecturalOverlay(storage, masking, staleness);\n\n  server.registerTool(\n    'get_architectural_overlay',\n    {\n      description: 'Retrieve an architectural overlay — layer map identifying Domain, Infrastructure, and Adapter boundaries',\n      inputSchema: {\n        layer: z.string().optional().describe('Filter by specific layer name'),\n      },\n    },\n    (args) => overlayHandler(args),\n  );\n\n  // Start MCP server\n  const transport = new StdioServerTransport();\n  await server.connect(transport);\n}\n\nmain().catch((err: unknown) => {\n  console.error('[ctxo] Fatal:', (err as Error).message);\n  process.exit(1);\n});\n","const DEFAULT_PATTERNS: Array<{ regex: RegExp; label: string }> = [\n  // AWS Access Key IDs (AKIA...)\n  { regex: /AKIA[0-9A-Z]{16}/g, label: 'AWS_KEY' },\n  // AWS Secret Access Keys (40 char base64 containing / or + — excludes hex-only git hashes)\n  { regex: /(?<![A-Za-z0-9/+])(?=[A-Za-z0-9/+=]{40}(?![A-Za-z0-9/+=]))(?=.*[/+])[A-Za-z0-9/+=]{40}/g, label: 'AWS_SECRET' },\n  // JWT tokens (eyJ...)\n  { regex: /eyJ[A-Za-z0-9_-]{10,}\\.[A-Za-z0-9_-]{10,}\\.[A-Za-z0-9_-]{10,}/g, label: 'JWT' },\n  // Private IPv4 (10.x.x.x, 172.16-31.x.x, 192.168.x.x)\n  { regex: /\\b(?:10\\.\\d{1,3}\\.\\d{1,3}\\.\\d{1,3}|172\\.(?:1[6-9]|2\\d|3[01])\\.\\d{1,3}\\.\\d{1,3}|192\\.168\\.\\d{1,3}\\.\\d{1,3})\\b/g, label: 'PRIVATE_IP' },\n  // Private IPv6 (fc00::/7)\n  { regex: /\\b[fF][cCdD][0-9a-fA-F]{0,2}(?::[0-9a-fA-F]{1,4}){1,7}\\b/g, label: 'PRIVATE_IPV6' },\n  // Environment variable assignments for secrets\n  { regex: /(?:_SECRET|_KEY|_TOKEN|_PASSWORD)\\s*=\\s*['\"]?[^\\s'\"]{8,}['\"]?/g, label: 'ENV_SECRET' },\n  // GCP service account keys\n  { regex:/\"private_key\"\\s*:\\s*\"-----BEGIN[^\"]+\"/g, label: 'GCP_KEY' },\n  // Azure connection strings\n  { regex: /AccountKey=[A-Za-z0-9+/=]{20,}/g, label: 'AZURE_KEY' },\n];\n\nexport interface MaskingPatternConfig {\n  readonly pattern: string;\n  readonly flags?: string;\n  readonly label: string;\n}\n\nexport class MaskingPipeline {\n  private readonly patterns: Array<{ regex: RegExp; label: string }>;\n\n  constructor(additionalPatterns: Array<{ regex: RegExp; label: string }> = []) {\n    // Clone RegExp objects to avoid shared mutable lastIndex state\n    this.patterns = [...DEFAULT_PATTERNS, ...additionalPatterns].map(({ regex, label }) => ({\n      regex: new RegExp(regex.source, regex.flags),\n      label,\n    }));\n  }\n\n  static fromConfig(configPatterns: MaskingPatternConfig[]): MaskingPipeline {\n    const additional: Array<{ regex: RegExp; label: string }> = [];\n\n    for (const { pattern, flags, label } of configPatterns) {\n      try {\n        additional.push({ regex: new RegExp(pattern, flags ?? 'g'), label });\n      } catch (err) {\n        console.error(`[ctxo:masking] Invalid regex pattern \"${pattern}\": ${(err as Error).message}`);\n      }\n    }\n\n    return new MaskingPipeline(additional);\n  }\n\n  mask(text: string): string {\n    if (text.length === 0) return text;\n\n    let result = text;\n    for (const { regex, label } of this.patterns) {\n      result = result.replace(regex, `[REDACTED:${label}]`);\n    }\n    return result;\n  }\n}\n","import { z } from 'zod';\nimport type { IStoragePort } from '../../ports/i-storage-port.js';\nimport type { IMaskingPort } from '../../ports/i-masking-port.js';\nimport { SymbolGraph } from '../../core/graph/symbol-graph.js';\nimport { JsonIndexReader } from '../storage/json-index-reader.js';\nimport { LogicSliceQuery } from '../../core/logic-slice/logic-slice-query.js';\nimport { DetailFormatter } from '../../core/detail-levels/detail-formatter.js';\nimport { DetailLevelSchema } from '../../core/types.js';\n\nconst InputSchema = z.object({\n  symbolId: z.string().min(1).optional(),\n  symbolIds: z.array(z.string().min(1)).optional(),\n  level: DetailLevelSchema.optional().default(3),\n}).refine(\n  (data) => data.symbolId || (data.symbolIds && data.symbolIds.length > 0),\n  { message: 'Either symbolId or symbolIds must be provided' },\n);\n\nexport type GetLogicSliceInput = z.infer<typeof InputSchema>;\n\nexport function getLogicSliceInputSchema() {\n  return {\n    type: 'object' as const,\n    properties: {\n      symbolId: { type: 'string' as const, description: 'The symbol ID to retrieve (format: file::name::kind)' },\n      level: { type: 'number' as const, enum: [1, 2, 3, 4], description: 'Detail level (1=minimal, 4=full)', default: 3 },\n    },\n    required: ['symbolId'] as const,\n  };\n}\n\nexport function buildGraphFromStorage(storage: IStoragePort): SymbolGraph {\n  const graph = new SymbolGraph();\n  for (const sym of storage.getAllSymbols()) {\n    graph.addNode(sym);\n  }\n  for (const edge of storage.getAllEdges()) {\n    graph.addEdge(edge);\n  }\n  return graph;\n}\n\n/**\n * Build graph directly from JSON index files (bypasses SQLite cache).\n * Always reads fresh data from disk — works even if ctxo index ran in another process.\n */\nexport function buildGraphFromJsonIndex(ctxoRoot: string): SymbolGraph {\n  const reader = new JsonIndexReader(ctxoRoot);\n  const indices = reader.readAll();\n\n  const graph = new SymbolGraph();\n  // Phase 1: all nodes\n  for (const fileIndex of indices) {\n    for (const sym of fileIndex.symbols) {\n      graph.addNode(sym);\n    }\n  }\n  // Phase 2: all edges (fuzzy resolution active since nodes are loaded)\n  for (const fileIndex of indices) {\n    for (const edge of fileIndex.edges) {\n      graph.addEdge(edge);\n    }\n  }\n  return graph;\n}\n\nexport interface StalenessCheck {\n  check(indexedFiles: readonly string[]): { message: string } | undefined;\n}\n\nexport function handleGetLogicSlice(\n  storage: IStoragePort,\n  masking: IMaskingPort,\n  staleness?: StalenessCheck,\n  ctxoRoot = '.ctxo',\n) {\n  const query = new LogicSliceQuery();\n  const formatter = new DetailFormatter();\n\n  // Build graph fresh on each call — try JSON index first (always up to date),\n  // fall back to SQLite storage (for tests and when JSON not available).\n  const getGraph = () => {\n    const jsonGraph = buildGraphFromJsonIndex(ctxoRoot);\n    if (jsonGraph.nodeCount > 0) return jsonGraph;\n    return buildGraphFromStorage(storage);\n  };\n\n  const handler = (args: Record<string, unknown>) => {\n    try {\n      const parsed = InputSchema.safeParse(args);\n      if (!parsed.success) {\n        return {\n          content: [{ type: 'text' as const, text: JSON.stringify({ error: true, message: parsed.error.message }) }],\n        };\n      }\n\n      const { symbolId, symbolIds, level } = parsed.data;\n      const ids = symbolIds ?? (symbolId ? [symbolId] : []);\n\n      const graph = getGraph();\n\n      // Batch support: query multiple symbols\n      const results = [];\n      for (const id of ids) {\n        const slice = query.getLogicSlice(graph, id);\n        if (slice) {\n          results.push(formatter.format(slice, level));\n        } else {\n          results.push({ found: false, symbolId: id, hint: 'Symbol not found. Run \"ctxo index\".' });\n        }\n      }\n\n      // Single symbol: return directly. Batch: return array.\n      const responseData = ids.length === 1 ? results[0] : { batch: true, results };\n\n      // Apply masking\n      const payload = masking.mask(JSON.stringify(responseData));\n\n      // Check staleness\n      const content: Array<{ type: 'text'; text: string }> = [];\n      if (staleness) {\n        const warning = staleness.check(storage.listIndexedFiles());\n        if (warning) {\n          content.push({ type: 'text', text: `⚠️ ${warning.message}` });\n        }\n      }\n      content.push({ type: 'text', text: payload });\n\n      return { content };\n    } catch (err) {\n      return {\n        content: [{ type: 'text' as const, text: JSON.stringify({ error: true, message: (err as Error).message }) }],\n      };\n    }\n  };\n\n  return handler;\n}\n","import type { SymbolNode, GraphEdge } from '../types.js';\n\nexport class SymbolGraph {\n  private readonly nodes = new Map<string, SymbolNode>();\n  private readonly nodesByFileAndName = new Map<string, SymbolNode>();\n  private readonly forwardEdges = new Map<string, GraphEdge[]>();\n  private readonly reverseEdges = new Map<string, GraphEdge[]>();\n  private edgeSet = new Set<string>();\n\n  addNode(node: SymbolNode): void {\n    this.nodes.set(node.symbolId, node);\n    // Index by file::name (ignoring kind) for fuzzy edge resolution\n    const parts = node.symbolId.split('::');\n    if (parts.length >= 2) {\n      this.nodesByFileAndName.set(`${parts[0]}::${parts[1]}`, node);\n    }\n  }\n\n  addEdge(edge: GraphEdge): void {\n    // Resolve edge endpoints: if exact ID not found, try fuzzy match by file::name\n    const resolvedFrom = this.resolveNodeId(edge.from);\n    const resolvedTo = this.resolveNodeId(edge.to);\n    const resolvedEdge: GraphEdge = { from: resolvedFrom, to: resolvedTo, kind: edge.kind };\n\n    const edgeKey = `${resolvedEdge.from}|${resolvedEdge.to}|${resolvedEdge.kind}`;\n    if (this.edgeSet.has(edgeKey)) return;\n    this.edgeSet.add(edgeKey);\n\n    const forward = this.forwardEdges.get(resolvedEdge.from) ?? [];\n    forward.push(resolvedEdge);\n    this.forwardEdges.set(resolvedEdge.from, forward);\n\n    const reverse = this.reverseEdges.get(resolvedEdge.to) ?? [];\n    reverse.push(resolvedEdge);\n    this.reverseEdges.set(resolvedEdge.to, reverse);\n  }\n\n  getNode(symbolId: string): SymbolNode | undefined {\n    return this.nodes.get(symbolId) ?? this.resolveNodeFuzzy(symbolId);\n  }\n\n  private resolveNodeId(id: string): string {\n    if (this.nodes.has(id)) return id;\n    const parts = id.split('::');\n    if (parts.length >= 2) {\n      const fuzzyKey = `${parts[0]}::${parts[1]}`;\n      const match = this.nodesByFileAndName.get(fuzzyKey);\n      if (match) return match.symbolId;\n    }\n    return id;\n  }\n\n  private resolveNodeFuzzy(id: string): SymbolNode | undefined {\n    const parts = id.split('::');\n    if (parts.length >= 2) {\n      return this.nodesByFileAndName.get(`${parts[0]}::${parts[1]}`);\n    }\n    return undefined;\n  }\n\n  getForwardEdges(symbolId: string): GraphEdge[] {\n    return this.forwardEdges.get(symbolId) ?? [];\n  }\n\n  getReverseEdges(symbolId: string): GraphEdge[] {\n    return this.reverseEdges.get(symbolId) ?? [];\n  }\n\n  hasNode(symbolId: string): boolean {\n    return this.nodes.has(symbolId);\n  }\n\n  get nodeCount(): number {\n    return this.nodes.size;\n  }\n\n  get edgeCount(): number {\n    return this.edgeSet.size;\n  }\n\n  allNodes(): SymbolNode[] {\n    return [...this.nodes.values()];\n  }\n\n  allEdges(): GraphEdge[] {\n    const edges: GraphEdge[] = [];\n    for (const list of this.forwardEdges.values()) {\n      edges.push(...list);\n    }\n    return edges;\n  }\n}\n","import type { SymbolNode, GraphEdge, LogicSliceResult } from '../types.js';\nimport type { SymbolGraph } from '../graph/symbol-graph.js';\n\nexport class LogicSliceQuery {\n  getLogicSlice(\n    graph: SymbolGraph,\n    symbolId: string,\n    maxDepth: number = Infinity,\n  ): LogicSliceResult | undefined {\n    const root = graph.getNode(symbolId);\n    if (!root) return undefined;\n\n    const visited = new Set<string>([symbolId]);\n    const dependencies: SymbolNode[] = [];\n    const collectedEdges: GraphEdge[] = [];\n\n    // BFS transitive closure\n    const queue: Array<{ id: string; depth: number }> = [{ id: symbolId, depth: 0 }];\n\n    while (queue.length > 0) {\n      const current = queue.shift()!;\n\n      if (current.depth >= maxDepth) continue;\n\n      const edges = graph.getForwardEdges(current.id);\n      for (const edge of edges) {\n        const depNode = graph.getNode(edge.to);\n        // Only include edges whose target node exists in the graph\n        if (!depNode) continue;\n\n        collectedEdges.push(edge);\n\n        if (visited.has(edge.to)) continue;\n        visited.add(edge.to);\n\n        dependencies.push(depNode);\n        queue.push({ id: edge.to, depth: current.depth + 1 });\n      }\n    }\n\n    return { root, dependencies, edges: collectedEdges };\n  }\n}\n","import type {\n  LogicSliceResult,\n  FormattedSlice,\n  DetailLevel,\n  SymbolNode,\n  GraphEdge,\n} from '../types.js';\n\nconst L1_MAX_LINES = 150;\nconst L4_TOKEN_BUDGET = 8000;\n\nexport class DetailFormatter {\n  format(slice: LogicSliceResult, level: DetailLevel): FormattedSlice {\n    switch (level) {\n      case 1:\n        return this.formatL1(slice);\n      case 2:\n        return this.formatL2(slice);\n      case 3:\n        return this.formatL3(slice);\n      case 4:\n        return this.formatL4(slice);\n    }\n  }\n\n  private formatL1(slice: LogicSliceResult): FormattedSlice {\n    const root = slice.root;\n    const lineCount = root.endLine - root.startLine + 1;\n\n    const clampedRoot: SymbolNode = lineCount > L1_MAX_LINES\n      ? { ...root, endLine: root.startLine + L1_MAX_LINES - 1 }\n      : root;\n\n    return {\n      root: clampedRoot,\n      dependencies: [],\n      edges: [],\n      level: 1,\n      levelDescription: 'L1: Root symbol signature only (no dependencies)',\n      ...(lineCount > L1_MAX_LINES ? { truncation: { truncated: true as const, reason: 'token_budget_exceeded' as const } } : {}),\n    };\n  }\n\n  private formatL2(slice: LogicSliceResult): FormattedSlice {\n    // L2: root + depth-1 direct dependencies\n    const directEdges = slice.edges.filter((e) => e.from === slice.root.symbolId);\n    const directDepIds = new Set(directEdges.map((e) => e.to));\n    const directDeps = slice.dependencies.filter((d) => directDepIds.has(d.symbolId));\n\n    return {\n      root: slice.root,\n      dependencies: directDeps,\n      edges: directEdges,\n      level: 2,\n      levelDescription: 'L2: Root + direct dependencies (depth 1)',\n    };\n  }\n\n  private formatL3(slice: LogicSliceResult): FormattedSlice {\n    return {\n      root: slice.root,\n      dependencies: slice.dependencies,\n      edges: slice.edges,\n      level: 3,\n      levelDescription: 'L3: Full transitive dependency closure',\n    };\n  }\n\n  private formatL4(slice: LogicSliceResult): FormattedSlice {\n    // L4: full closure with token budget enforcement\n    const estimatedTokens = this.estimateTokens(slice);\n\n    if (estimatedTokens > L4_TOKEN_BUDGET) {\n      // Truncate dependencies to fit budget\n      const truncated = this.truncateToTokenBudget(slice, L4_TOKEN_BUDGET);\n      return {\n        ...truncated,\n        level: 4,\n        levelDescription: 'L4: Full closure with 8K token budget (truncated)',\n        truncation: {\n          truncated: true,\n          reason: 'token_budget_exceeded',\n        },\n      };\n    }\n\n    return {\n      root: slice.root,\n      dependencies: slice.dependencies,\n      edges: slice.edges,\n      level: 4,\n      levelDescription: 'L4: Full closure with 8K token budget',\n    };\n  }\n\n  private estimateTokens(slice: LogicSliceResult): number {\n    // Rough estimate: ~4 chars per token\n    let chars = this.symbolCharEstimate(slice.root);\n    for (const dep of slice.dependencies) {\n      chars += this.symbolCharEstimate(dep);\n    }\n    for (const edge of slice.edges) {\n      chars += (edge.from.length + edge.to.length + edge.kind.length + 10);\n    }\n    return Math.ceil(chars / 4);\n  }\n\n  private symbolCharEstimate(node: SymbolNode): number {\n    // Estimate based on line count (average ~40 chars per line)\n    return (node.endLine - node.startLine + 1) * 40;\n  }\n\n  private truncateToTokenBudget(\n    slice: LogicSliceResult,\n    budget: number,\n  ): { root: SymbolNode; dependencies: SymbolNode[]; edges: GraphEdge[] } {\n    let currentTokens = this.symbolCharEstimate(slice.root) / 4;\n    const deps: SymbolNode[] = [];\n    const includedIds = new Set<string>([slice.root.symbolId]);\n\n    for (const dep of slice.dependencies) {\n      const depTokens = this.symbolCharEstimate(dep) / 4;\n      if (currentTokens + depTokens > budget) break;\n      currentTokens += depTokens;\n      deps.push(dep);\n      includedIds.add(dep.symbolId);\n    }\n\n    const edges = slice.edges.filter(\n      (e) => includedIds.has(e.from) && includedIds.has(e.to),\n    );\n\n    return { root: slice.root, dependencies: deps, edges };\n  }\n}\n","import { z } from 'zod';\nimport type { IStoragePort } from '../../ports/i-storage-port.js';\nimport type { IGitPort } from '../../ports/i-git-port.js';\nimport type { IMaskingPort } from '../../ports/i-masking-port.js';\nimport { RevertDetector } from '../../core/why-context/revert-detector.js';\nimport { JsonIndexReader } from '../storage/json-index-reader.js';\nimport type { CommitIntent, AntiPattern } from '../../core/types.js';\nimport type { StalenessCheck } from './get-logic-slice.js';\n\nconst InputSchema = z.object({\n  symbolId: z.string().min(1),\n});\n\nexport function handleGetWhyContext(\n  storage: IStoragePort,\n  git: IGitPort,\n  masking: IMaskingPort,\n  staleness?: StalenessCheck,\n  ctxoRoot = '.ctxo',\n) {\n  const revertDetector = new RevertDetector();\n  const indexReader = new JsonIndexReader(ctxoRoot);\n\n  return async (args: Record<string, unknown>) => {\n    try {\n      const parsed = InputSchema.safeParse(args);\n      if (!parsed.success) {\n        return {\n          content: [{ type: 'text' as const, text: JSON.stringify({ error: true, message: parsed.error.message }) }],\n        };\n      }\n\n      const { symbolId } = parsed.data;\n\n      const symbol = storage.getSymbolById(symbolId);\n      if (!symbol) {\n        return {\n          content: [{ type: 'text' as const, text: JSON.stringify({ found: false, hint: 'Symbol not found. Run \"ctxo index\" to build the codebase index.' }) }],\n        };\n      }\n\n      const filePath = symbolId.split('::')[0]!;\n\n      // Try committed index first (FR16: anti-patterns persist in committed index)\n      const indices = indexReader.readAll();\n      const fileIndex = indices.find((i) => i.file === filePath);\n\n      let commitHistory: CommitIntent[];\n      let antiPatterns: AntiPattern[];\n\n      if (fileIndex && fileIndex.intent.length > 0) {\n        commitHistory = fileIndex.intent;\n        antiPatterns = fileIndex.antiPatterns;\n      } else {\n        // Fallback: compute on-demand from git\n        const commits = await git.getCommitHistory(filePath);\n        commitHistory = commits.map((c) => ({\n          hash: c.hash,\n          message: c.message,\n          date: c.date,\n          kind: 'commit' as const,\n        }));\n        antiPatterns = revertDetector.detect(commits);\n      }\n\n      // Assemble result — separation of concerns: no changeIntelligence here\n      // Use get_change_intelligence tool for complexity/churn scoring\n      const responsePayload: Record<string, unknown> = {\n        commitHistory,\n        antiPatternWarnings: antiPatterns,\n      };\n\n      if (antiPatterns.length > 0) {\n        responsePayload.warningBadge = '⚠ Anti-pattern detected';\n      }\n\n      const payload = masking.mask(JSON.stringify(responsePayload));\n\n      const content: Array<{ type: 'text'; text: string }> = [];\n      if (staleness) {\n        const warning = staleness.check(storage.listIndexedFiles());\n        if (warning) content.push({ type: 'text', text: `⚠️ ${warning.message}` });\n      }\n      content.push({ type: 'text', text: payload });\n\n      return { content };\n    } catch (err) {\n      return {\n        content: [{ type: 'text' as const, text: JSON.stringify({ error: true, message: (err as Error).message }) }],\n      };\n    }\n  };\n}\n","import { z } from 'zod';\nimport type { IStoragePort } from '../../ports/i-storage-port.js';\nimport type { IGitPort } from '../../ports/i-git-port.js';\nimport type { IMaskingPort } from '../../ports/i-masking-port.js';\nimport { ChurnAnalyzer } from '../../core/change-intelligence/churn-analyzer.js';\nimport { JsonIndexReader } from '../storage/json-index-reader.js';\nimport type { StalenessCheck } from './get-logic-slice.js';\nimport { HealthScorer } from '../../core/change-intelligence/health-scorer.js';\n\nconst InputSchema = z.object({\n  symbolId: z.string().min(1),\n});\n\nexport function handleGetChangeIntelligence(\n  storage: IStoragePort,\n  git: IGitPort,\n  masking: IMaskingPort,\n  staleness?: StalenessCheck,\n  ctxoRoot = '.ctxo',\n) {\n  const churnAnalyzer = new ChurnAnalyzer();\n  const healthScorer = new HealthScorer();\n  const indexReader = new JsonIndexReader(ctxoRoot);\n\n  return async (args: Record<string, unknown>) => {\n    try {\n      const parsed = InputSchema.safeParse(args);\n      if (!parsed.success) {\n        return {\n          content: [{ type: 'text' as const, text: JSON.stringify({ error: true, message: parsed.error.message }) }],\n        };\n      }\n\n      const { symbolId } = parsed.data;\n\n      const symbol = storage.getSymbolById(symbolId);\n      if (!symbol) {\n        return {\n          content: [{ type: 'text' as const, text: JSON.stringify({ found: false, hint: 'Symbol not found. Run \"ctxo index\" to build the codebase index.' }) }],\n        };\n      }\n\n      const filePath = symbolId.split('::')[0]!;\n      const normalizePath = (p: string) => p.replace(/\\\\/g, '/');\n\n      // Get churn data for all files in parallel\n      const allFiles = storage.listIndexedFiles();\n      const churnResults = await Promise.all(allFiles.map((f) => git.getFileChurn(f)));\n\n      const maxChurn = Math.max(1, ...churnResults.map((c) => c.commitCount));\n      const targetChurn = churnResults.find((c) => normalizePath(c.filePath) === normalizePath(filePath));\n      const commitCount = targetChurn?.commitCount ?? 0;\n\n      const normalizedChurn = churnAnalyzer.normalize(commitCount, maxChurn);\n\n      // Read cyclomatic complexity from committed index\n      const indices = indexReader.readAll();\n      const fileIndex = indices.find((i) => i.file === filePath);\n      const complexityEntries = fileIndex?.complexity ?? [];\n\n      // Exact match first, then aggregate (max of methods for class-level queries)\n      let cyclomatic = complexityEntries.find((c) => c.symbolId === symbolId)?.cyclomatic;\n      if (cyclomatic === undefined) {\n        // For class/file: use max complexity of all methods in this file\n        const symbolName = symbolId.split('::')[1] ?? '';\n        const relatedEntries = complexityEntries.filter((c) =>\n          c.symbolId.startsWith(`${filePath}::${symbolName}.`),\n        );\n        cyclomatic = relatedEntries.length > 0\n          ? Math.max(...relatedEntries.map((c) => c.cyclomatic))\n          : 1;\n      }\n      // Normalize: cyclomatic 1=0, 10+=1.0\n      const normalizedComplexity = Math.min((cyclomatic - 1) / 9, 1);\n\n      const score = healthScorer.score(symbolId, normalizedComplexity, normalizedChurn);\n\n      const payload = masking.mask(JSON.stringify(score));\n\n      const content: Array<{ type: 'text'; text: string }> = [];\n      if (staleness) {\n        const warning = staleness.check(storage.listIndexedFiles());\n        if (warning) content.push({ type: 'text', text: `⚠️ ${warning.message}` });\n      }\n      content.push({ type: 'text', text: payload });\n\n      return { content };\n    } catch (err) {\n      return {\n        content: [{ type: 'text' as const, text: JSON.stringify({ error: true, message: (err as Error).message }) }],\n      };\n    }\n  };\n}\n","export class ChurnAnalyzer {\n  normalize(commitCount: number, maxCommitCount: number): number {\n    if (maxCommitCount <= 0) return 0;\n    if (commitCount < 0) {\n      throw new Error(`Invalid commit count: ${commitCount}`);\n    }\n    return Math.min(commitCount / maxCommitCount, 1);\n  }\n}\n","import type { ChangeIntelligenceScore, ScoreBand } from '../types.js';\n\nexport class HealthScorer {\n  score(symbolId: string, complexity: number, churn: number): ChangeIntelligenceScore {\n    const composite = complexity * churn;\n    const band = this.toBand(composite);\n\n    return { symbolId, complexity, churn, composite, band };\n  }\n\n  private toBand(composite: number): ScoreBand {\n    if (composite < 0.3) return 'low';\n    if (composite < 0.7) return 'medium';\n    return 'high';\n  }\n}\n","import { z } from 'zod';\nimport type { IStoragePort } from '../../ports/i-storage-port.js';\nimport type { IMaskingPort } from '../../ports/i-masking-port.js';\nimport { BlastRadiusCalculator } from '../../core/blast-radius/blast-radius-calculator.js';\nimport type { StalenessCheck } from './get-logic-slice.js';\nimport { buildGraphFromJsonIndex, buildGraphFromStorage } from './get-logic-slice.js';\n\nconst InputSchema = z.object({\n  symbolId: z.string().min(1),\n});\n\nexport function handleGetBlastRadius(\n  storage: IStoragePort,\n  masking: IMaskingPort,\n  staleness?: StalenessCheck,\n  ctxoRoot = '.ctxo',\n) {\n  const calculator = new BlastRadiusCalculator();\n  const getGraph = () => {\n    const jsonGraph = buildGraphFromJsonIndex(ctxoRoot);\n    if (jsonGraph.nodeCount > 0) return jsonGraph;\n    return buildGraphFromStorage(storage);\n  };\n\n  return (args: Record<string, unknown>) => {\n    try {\n      const parsed = InputSchema.safeParse(args);\n      if (!parsed.success) {\n        return {\n          content: [{ type: 'text' as const, text: JSON.stringify({ error: true, message: parsed.error.message }) }],\n        };\n      }\n\n      const { symbolId } = parsed.data;\n      const graph = getGraph();\n\n      if (!graph.hasNode(symbolId)) {\n        return {\n          content: [{ type: 'text' as const, text: JSON.stringify({ found: false, hint: 'Symbol not found. Run \"ctxo index\" to build the codebase index.' }) }],\n        };\n      }\n\n      const result = calculator.calculate(graph, symbolId);\n      const payload = masking.mask(JSON.stringify({\n        symbolId,\n        impactScore: result.impactedSymbols.length,\n        directDependentsCount: result.directDependentsCount,\n        overallRiskScore: result.overallRiskScore,\n        impactedSymbols: result.impactedSymbols,\n      }));\n\n      const content: Array<{ type: 'text'; text: string }> = [];\n      if (staleness) {\n        const warning = staleness.check(storage.listIndexedFiles());\n        if (warning) content.push({ type: 'text', text: `⚠️ ${warning.message}` });\n      }\n      content.push({ type: 'text', text: payload });\n\n      return { content };\n    } catch (err) {\n      return {\n        content: [{ type: 'text' as const, text: JSON.stringify({ error: true, message: (err as Error).message }) }],\n      };\n    }\n  };\n}\n","import type { SymbolGraph } from '../graph/symbol-graph.js';\n\nexport interface BlastRadiusEntry {\n  readonly symbolId: string;\n  readonly depth: number;\n  readonly dependentCount: number;\n  readonly riskScore: number;\n}\n\nexport interface BlastRadiusResult {\n  readonly impactedSymbols: BlastRadiusEntry[];\n  readonly directDependentsCount: number;\n  readonly overallRiskScore: number;\n}\n\nexport class BlastRadiusCalculator {\n  calculate(graph: SymbolGraph, symbolId: string): BlastRadiusResult {\n    if (!graph.hasNode(symbolId)) {\n      return { impactedSymbols: [], directDependentsCount: 0, overallRiskScore: 0 };\n    }\n\n    const visited = new Set<string>([symbolId]);\n    const entries: BlastRadiusEntry[] = [];\n\n    // BFS via reverse edges (who depends on this symbol?)\n    const queue: Array<{ id: string; depth: number }> = [{ id: symbolId, depth: 0 }];\n\n    while (queue.length > 0) {\n      const current = queue.shift()!;\n\n      const reverseEdges = graph.getReverseEdges(current.id);\n      for (const edge of reverseEdges) {\n        if (visited.has(edge.from)) continue;\n        visited.add(edge.from);\n\n        if (!graph.hasNode(edge.from)) continue;\n\n        const depth = current.depth + 1;\n\n        // Risk score: 1/depth^0.7 — closer dependents = higher risk\n        const riskScore = 1 / Math.pow(depth, 0.7);\n\n        entries.push({\n          symbolId: edge.from,\n          depth,\n          dependentCount: graph.getReverseEdges(edge.from).length,\n          riskScore: Math.round(riskScore * 1000) / 1000,\n        });\n\n        queue.push({ id: edge.from, depth });\n      }\n    }\n\n    // Sort by depth ascending\n    entries.sort((a, b) => a.depth - b.depth);\n\n    const directDependentsCount = entries.filter((e) => e.depth === 1).length;\n\n    // Overall risk: sum of all risk scores, normalized to 0.0–1.0\n    const totalRisk = entries.reduce((sum, e) => sum + e.riskScore, 0);\n    const maxPossibleRisk = entries.length > 0 ? entries.length : 1;\n    const overallRiskScore = Math.round(Math.min(totalRisk / maxPossibleRisk, 1) * 1000) / 1000;\n\n    return { impactedSymbols: entries, directDependentsCount, overallRiskScore };\n  }\n}\n","import { z } from 'zod';\nimport type { IStoragePort } from '../../ports/i-storage-port.js';\nimport type { IMaskingPort } from '../../ports/i-masking-port.js';\nimport { ArchitecturalOverlay } from '../../core/overlay/architectural-overlay.js';\nimport type { StalenessCheck } from './get-logic-slice.js';\n\nconst InputSchema = z.object({\n  layer: z.string().optional(),\n});\n\nexport function handleGetArchitecturalOverlay(\n  storage: IStoragePort,\n  masking: IMaskingPort,\n  staleness?: StalenessCheck,\n) {\n  const overlay = new ArchitecturalOverlay();\n\n  return (args: Record<string, unknown>) => {\n    try {\n      const parsed = InputSchema.safeParse(args);\n      if (!parsed.success) {\n        return {\n          content: [{ type: 'text' as const, text: JSON.stringify({ error: true, message: parsed.error.message }) }],\n        };\n      }\n\n      const files = storage.listIndexedFiles();\n      const result = overlay.classify(files);\n\n      const buildContent = (payloadStr: string) => {\n        const content: Array<{ type: 'text'; text: string }> = [];\n        if (staleness) {\n          const warning = staleness.check(files);\n          if (warning) content.push({ type: 'text', text: `⚠️ ${warning.message}` });\n        }\n        content.push({ type: 'text', text: payloadStr });\n        return content;\n      };\n\n      // Filter by layer if specified\n      if (parsed.data.layer) {\n        const filtered = result.layers[parsed.data.layer];\n        const payload = masking.mask(JSON.stringify({ layer: parsed.data.layer, files: filtered ?? [] }));\n        return { content: buildContent(payload) };\n      }\n\n      const payload = masking.mask(JSON.stringify(result));\n      return { content: buildContent(payload) };\n    } catch (err) {\n      return {\n        content: [{ type: 'text' as const, text: JSON.stringify({ error: true, message: (err as Error).message }) }],\n      };\n    }\n  };\n}\n","export interface LayerRule {\n  readonly pattern: RegExp;\n  readonly layer: string;\n}\n\nexport interface OverlayResult {\n  readonly layers: Record<string, string[]>;\n}\n\nconst DEFAULT_RULES: LayerRule[] = [\n  // Test layer (matched first — __tests__, .test.ts, tests/, fixtures)\n  { pattern: /__tests__/, layer: 'Test' },\n  { pattern: /\\.test\\.ts$/, layer: 'Test' },\n  { pattern: /\\btests\\b/, layer: 'Test' },\n  { pattern: /\\bfixtures?\\b/, layer: 'Test' },\n  // Composition root\n  { pattern: /src\\/index\\.ts$/, layer: 'Composition' },\n  // Domain\n  { pattern: /\\bcore\\b/, layer: 'Domain' },\n  { pattern: /\\bports?\\b/, layer: 'Domain' },\n  // Adapter\n  { pattern: /\\badapters?\\b/, layer: 'Adapter' },\n  { pattern: /\\bcli\\b/, layer: 'Adapter' },\n  // Infrastructure\n  { pattern: /\\binfra\\b/, layer: 'Infrastructure' },\n  { pattern: /\\bdb\\b/, layer: 'Infrastructure' },\n  { pattern: /\\bqueue\\b/, layer: 'Infrastructure' },\n  // Config files\n  { pattern: /\\.(config|rc)\\.(ts|js|json)$/, layer: 'Configuration' },\n];\n\nexport class ArchitecturalOverlay {\n  private readonly rules: LayerRule[];\n\n  constructor(customRules?: LayerRule[]) {\n    this.rules = (customRules ?? DEFAULT_RULES).map(({ pattern, layer }) => ({\n      pattern: new RegExp(pattern.source, pattern.flags),\n      layer,\n    }));\n  }\n\n  classify(filePaths: readonly string[]): OverlayResult {\n    const layers: Record<string, string[]> = {};\n\n    for (const filePath of filePaths) {\n      const layer = this.matchLayer(filePath);\n      const list = layers[layer] ?? [];\n      list.push(filePath);\n      layers[layer] = list;\n    }\n\n    return { layers };\n  }\n\n  private matchLayer(filePath: string): string {\n    for (const rule of this.rules) {\n      if (rule.pattern.test(filePath)) {\n        return rule.layer;\n      }\n    }\n    return 'Unknown';\n  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package/dist/json-index-reader-PNLPAS42.js

@@ -0,0 +1,8 @@
+#!/usr/bin/env node
+import {
+  JsonIndexReader
+} from "./chunk-54ETLIQX.js";
+export {
+  JsonIndexReader
+};
+//# sourceMappingURL=json-index-reader-PNLPAS42.js.map

package/dist/json-index-reader-PNLPAS42.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":[],"sourcesContent":[],"mappings":"","names":[]}

package/dist/staleness-detector-5AN223FM.js

@@ -0,0 +1,39 @@
+#!/usr/bin/env node
+
+// src/core/staleness/staleness-detector.ts
+import { statSync, existsSync } from "fs";
+import { join } from "path";
+var StalenessDetector = class {
+  projectRoot;
+  indexDir;
+  constructor(projectRoot, ctxoRoot) {
+    this.projectRoot = projectRoot;
+    this.indexDir = join(ctxoRoot, "index");
+  }
+  check(indexedFiles) {
+    if (!existsSync(this.indexDir)) return void 0;
+    const staleFiles = [];
+    for (const relativePath of indexedFiles) {
+      const sourcePath = join(this.projectRoot, relativePath);
+      const indexPath = join(this.indexDir, `${relativePath}.json`);
+      if (!existsSync(sourcePath) || !existsSync(indexPath)) continue;
+      try {
+        const sourceMtime = Math.floor(statSync(sourcePath).mtimeMs / 1e3);
+        const indexMtime = Math.floor(statSync(indexPath).mtimeMs / 1e3);
+        if (sourceMtime > indexMtime) {
+          staleFiles.push(relativePath);
+        }
+      } catch {
+      }
+    }
+    if (staleFiles.length === 0) return void 0;
+    return {
+      staleFiles,
+      message: `Index may be stale for ${staleFiles.length} file(s). Run "ctxo index" to refresh.`
+    };
+  }
+};
+export {
+  StalenessDetector
+};
+//# sourceMappingURL=staleness-detector-5AN223FM.js.map

package/dist/staleness-detector-5AN223FM.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/core/staleness/staleness-detector.ts"],"sourcesContent":["import { statSync, existsSync } from 'node:fs';\nimport { join } from 'node:path';\n\nexport interface StalenessWarning {\n  readonly staleFiles: string[];\n  readonly message: string;\n}\n\nexport class StalenessDetector {\n  private readonly projectRoot: string;\n  private readonly indexDir: string;\n\n  constructor(projectRoot: string, ctxoRoot: string) {\n    this.projectRoot = projectRoot;\n    this.indexDir = join(ctxoRoot, 'index');\n  }\n\n  check(indexedFiles: readonly string[]): StalenessWarning | undefined {\n    if (!existsSync(this.indexDir)) return undefined;\n\n    const staleFiles: string[] = [];\n\n    for (const relativePath of indexedFiles) {\n      const sourcePath = join(this.projectRoot, relativePath);\n      const indexPath = join(this.indexDir, `${relativePath}.json`);\n\n      if (!existsSync(sourcePath) || !existsSync(indexPath)) continue;\n\n      try {\n        const sourceMtime = Math.floor(statSync(sourcePath).mtimeMs / 1000);\n        const indexMtime = Math.floor(statSync(indexPath).mtimeMs / 1000);\n\n        if (sourceMtime > indexMtime) {\n          staleFiles.push(relativePath);\n        }\n      } catch {\n        // Skip files we can't stat\n      }\n    }\n\n    if (staleFiles.length === 0) return undefined;\n\n    return {\n      staleFiles,\n      message: `Index may be stale for ${staleFiles.length} file(s). Run \"ctxo index\" to refresh.`,\n    };\n  }\n}\n"],"mappings":";;;AAAA,SAAS,UAAU,kBAAkB;AACrC,SAAS,YAAY;AAOd,IAAM,oBAAN,MAAwB;AAAA,EACZ;AAAA,EACA;AAAA,EAEjB,YAAY,aAAqB,UAAkB;AACjD,SAAK,cAAc;AACnB,SAAK,WAAW,KAAK,UAAU,OAAO;AAAA,EACxC;AAAA,EAEA,MAAM,cAA+D;AACnE,QAAI,CAAC,WAAW,KAAK,QAAQ,EAAG,QAAO;AAEvC,UAAM,aAAuB,CAAC;AAE9B,eAAW,gBAAgB,cAAc;AACvC,YAAM,aAAa,KAAK,KAAK,aAAa,YAAY;AACtD,YAAM,YAAY,KAAK,KAAK,UAAU,GAAG,YAAY,OAAO;AAE5D,UAAI,CAAC,WAAW,UAAU,KAAK,CAAC,WAAW,SAAS,EAAG;AAEvD,UAAI;AACF,cAAM,cAAc,KAAK,MAAM,SAAS,UAAU,EAAE,UAAU,GAAI;AAClE,cAAM,aAAa,KAAK,MAAM,SAAS,SAAS,EAAE,UAAU,GAAI;AAEhE,YAAI,cAAc,YAAY;AAC5B,qBAAW,KAAK,YAAY;AAAA,QAC9B;AAAA,MACF,QAAQ;AAAA,MAER;AAAA,IACF;AAEA,QAAI,WAAW,WAAW,EAAG,QAAO;AAEpC,WAAO;AAAA,MACL;AAAA,MACA,SAAS,0BAA0B,WAAW,MAAM;AAAA,IACtD;AAAA,EACF;AACF;","names":[]}

package/package.json

@@ -0,0 +1,57 @@
+{
+  "name": "ctxo-mcp",
+  "version": "0.2.0",
+  "description": "MCP server delivering dependency-aware, history-enriched context for codebases",
+  "type": "module",
+  "engines": {
+    "node": ">=20"
+  },
+  "bin": {
+    "ctxo": "dist/index.js"
+  },
+  "files": [
+    "dist/",
+    "README.md"
+  ],
+  "main": "dist/index.js",
+  "types": "dist/index.d.ts",
+  "scripts": {
+    "build": "tsup",
+    "dev": "tsx src/index.ts",
+    "test": "vitest run",
+    "test:unit": "vitest run --config vitest.config.unit.ts",
+    "test:unit:coverage": "vitest run --config vitest.config.unit.ts --coverage",
+    "test:e2e": "vitest run --config vitest.config.e2e.ts",
+    "test:watch": "vitest",
+    "test:coverage": "vitest run --coverage",
+    "lint": "eslint src/",
+    "typecheck": "tsc --noEmit"
+  },
+  "keywords": [
+    "mcp",
+    "context",
+    "ai",
+    "coding-assistant",
+    "dependency-graph"
+  ],
+  "author": "Alper Hankendi",
+  "license": "MIT",
+  "dependencies": {
+    "@modelcontextprotocol/sdk": "^1.12.1",
+    "chokidar": "^5.0.0",
+    "simple-git": "^3.27.0",
+    "sql.js": "^1.14.1",
+    "ts-morph": "^27.0.2",
+    "zod": "^4.3.6"
+  },
+  "devDependencies": {
+    "@types/node": "^22.15.3",
+    "@vitest/coverage-v8": "^3.1.3",
+    "eslint": "^9.26.0",
+    "tsup": "^8.4.0",
+    "tsx": "^4.19.4",
+    "typescript": "^5.8.3",
+    "typescript-eslint": "^8.57.2",
+    "vitest": "^3.1.3"
+  }
+}