cotx-engine 0.1.0

package/dist/commands/map.js

@@ -0,0 +1,409 @@
+import { CotxStore } from '../store/store.js';
+import { CotxGraph } from '../query/graph-index.js';
+const TOKEN_LIMITS = {
+    overview: 1500,
+    module: 1000,
+    flow: 800,
+};
+/** Max dependencies to show inline in overview table */
+const MAX_DEPS_INLINE = 5;
+function estimateTokens(text) {
+    return Math.ceil(text.length / 4);
+}
+export async function commandMap(projectRoot, options) {
+    const store = new CotxStore(projectRoot);
+    if (!store.exists()) {
+        console.log('No .cotx/ found. Run: cotx compile');
+        return;
+    }
+    const scope = options.scope ?? 'overview';
+    const depth = options.depth ?? 2;
+    const markdown = generateMapSummary(store, scope, depth);
+    console.log(markdown);
+}
+// Exported for MCP tool use
+export function generateMapSummary(store, scope, depth) {
+    if (scope === 'overview') {
+        return generateOverview(store, depth);
+    }
+    else if (scope.startsWith('module:')) {
+        const moduleId = scope.slice('module:'.length);
+        return generateModuleSummary(store, moduleId, depth);
+    }
+    else if (scope.startsWith('flow:')) {
+        const flowId = scope.slice('flow:'.length);
+        return generateFlowSummary(store, flowId, depth);
+    }
+    else {
+        return `Unknown scope: ${scope}. Use: overview, module:<id>, or flow:<id>`;
+    }
+}
+function generateOverview(store, depth) {
+    const meta = store.readMeta();
+    const moduleIds = store.listModules();
+    // Load all modules with file counts
+    const modules = moduleIds.map((id) => ({
+        id,
+        mod: store.readModule(id),
+    }));
+    // Sort by file count descending for truncation purposes
+    modules.sort((a, b) => (b.mod.files?.length ?? 0) - (a.mod.files?.length ?? 0));
+    const lines = [];
+    lines.push(`## Project: ${meta.project}`);
+    lines.push('');
+    // Build module table
+    lines.push(`### Modules (${modules.length})`);
+    if (depth === 1) {
+        // Minimal: just names and file counts
+        lines.push('| Module | Files |');
+        lines.push('|--------|-------|');
+        for (const { id, mod } of modules) {
+            lines.push(`| ${id} | ${mod.files?.length ?? 0} |`);
+        }
+    }
+    else if (depth >= 2) {
+        // Add dependencies and responsibility
+        lines.push('| Module | Files | Responsibility | Dependencies |');
+        lines.push('|--------|-------|---------------|-------------|');
+        for (const { id, mod } of modules) {
+            const allDeps = mod.depends_on ?? [];
+            const shownDeps = allDeps.slice(0, MAX_DEPS_INLINE).join(', ');
+            const depsCell = allDeps.length > MAX_DEPS_INLINE
+                ? `→ ${shownDeps}, +${allDeps.length - MAX_DEPS_INLINE}`
+                : allDeps.length > 0 ? `→ ${shownDeps}` : '—';
+            const resp = mod.enriched?.responsibility ?? mod.enriched?.auto_description ?? '—';
+            lines.push(`| ${id} | ${mod.files?.length ?? 0} | ${resp} | ${depsCell} |`);
+        }
+    }
+    // Key constraints from annotations (depth >= 2)
+    if (depth >= 2) {
+        const constraints = [];
+        for (const { mod } of modules) {
+            if (mod.annotations) {
+                for (const ann of mod.annotations) {
+                    if (ann.type === 'constraint' && !ann.stale) {
+                        constraints.push(ann.content);
+                    }
+                }
+            }
+        }
+        if (constraints.length > 0) {
+            lines.push('');
+            lines.push('### Key Constraints');
+            for (const c of constraints) {
+                lines.push(`- ${c}`);
+            }
+        }
+    }
+    // Concept counts per module (depth >= 3)
+    if (depth >= 3) {
+        const conceptIds = store.listConcepts();
+        const conceptsByModule = new Map();
+        for (const cid of conceptIds) {
+            const concept = store.readConcept(cid);
+            const modId = concept.layer;
+            if (modId) {
+                conceptsByModule.set(modId, (conceptsByModule.get(modId) ?? 0) + 1);
+            }
+        }
+        if (conceptsByModule.size > 0) {
+            lines.push('');
+            lines.push('### Concept Distribution');
+            for (const [modId, count] of [...conceptsByModule.entries()].sort((a, b) => b[1] - a[1])) {
+                lines.push(`- ${modId}: ${count} concept${count !== 1 ? 's' : ''}`);
+            }
+        }
+    }
+    // Active concerns
+    const concernIds = store.listConcerns();
+    const activeConcerns = [];
+    for (const cid of concernIds) {
+        activeConcerns.push(store.readConcern(cid));
+    }
+    if (activeConcerns.length > 0) {
+        lines.push('');
+        lines.push('### Active Concerns');
+        for (const c of activeConcerns) {
+            lines.push(`- [${c.type}] ${c.description} (${c.severity})`);
+        }
+    }
+    lines.push('');
+    lines.push(`Compiled: ${meta.compiled_at} | Resolution: ${meta.module_resolution}`);
+    let result = lines.join('\n');
+    // Enforce token budget: truncate to top modules by file count
+    const limit = TOKEN_LIMITS.overview * 4; // chars
+    if (result.length > limit) {
+        // Keep reducing modules until we fit
+        let truncated = modules.length;
+        while (result.length > limit && truncated > 1) {
+            truncated = Math.floor(truncated * 0.75);
+            const reducedModules = modules.slice(0, truncated);
+            const truncLines = [];
+            truncLines.push(`## Project: ${meta.project}`);
+            truncLines.push('');
+            truncLines.push(`### Modules (${modules.length}, showing top ${truncated} by file count)`);
+            if (depth === 1) {
+                truncLines.push('| Module | Files |');
+                truncLines.push('|--------|-------|');
+                for (const { id, mod } of reducedModules) {
+                    truncLines.push(`| ${id} | ${mod.files?.length ?? 0} |`);
+                }
+            }
+            else {
+                truncLines.push('| Module | Files | Responsibility | Dependencies |');
+                truncLines.push('|--------|-------|---------------|-------------|');
+                for (const { id, mod } of reducedModules) {
+                    const allDeps = mod.depends_on ?? [];
+                    const shownDeps = allDeps.slice(0, MAX_DEPS_INLINE).join(', ');
+                    const depsCell = allDeps.length > MAX_DEPS_INLINE
+                        ? `→ ${shownDeps}, +${allDeps.length - MAX_DEPS_INLINE}`
+                        : allDeps.length > 0 ? `→ ${shownDeps}` : '—';
+                    const resp = mod.enriched?.responsibility ?? mod.enriched?.auto_description ?? '—';
+                    truncLines.push(`| ${id} | ${mod.files?.length ?? 0} | ${resp} | ${depsCell} |`);
+                }
+            }
+            truncLines.push('');
+            truncLines.push(`Compiled: ${meta.compiled_at} | Resolution: ${meta.module_resolution}`);
+            result = truncLines.join('\n');
+        }
+    }
+    return result;
+}
+function generateModuleSummary(store, moduleId, depth) {
+    const moduleIds = store.listModules();
+    if (!moduleIds.includes(moduleId)) {
+        return `Module "${moduleId}" not found. Available modules: ${moduleIds.join(', ')}`;
+    }
+    const mod = store.readModule(moduleId);
+    const graph = CotxGraph.fromStore(store);
+    const lines = [];
+    lines.push(`## Module: ${moduleId}`);
+    lines.push('');
+    if (mod.enriched?.responsibility) {
+        lines.push(`> ${mod.enriched.responsibility}`);
+        lines.push('');
+    }
+    lines.push(`Entry: ${mod.canonical_entry}`);
+    lines.push(`Files: ${mod.files?.length ?? 0}`);
+    const deps = (mod.depends_on ?? []).join(', ');
+    lines.push(`Dependencies: ${deps.length > 0 ? `→ ${deps}` : '—'}`);
+    const revDeps = (mod.depended_by ?? []).join(', ');
+    lines.push(`Depended by: ${revDeps.length > 0 ? `← ${revDeps}` : '—'}`);
+    // Contracts involving this module
+    const contractIds = store.listContracts();
+    const relatedContracts = [];
+    for (const cid of contractIds) {
+        const contract = store.readContract(cid);
+        if (contract.provider === moduleId || contract.consumer === moduleId) {
+            relatedContracts.push(contract);
+        }
+    }
+    if (relatedContracts.length > 0) {
+        lines.push('');
+        lines.push('### Contracts');
+        const maxContracts = depth >= 2 ? 10 : 5;
+        for (const contract of relatedContracts.slice(0, maxContracts)) {
+            const iface = contract.interface.slice(0, 5).join(', ');
+            const ifaceStr = contract.interface.length > 5
+                ? `${iface}, ...+${contract.interface.length - 5}`
+                : iface;
+            lines.push(`- ${contract.consumer} → ${contract.provider}: ${ifaceStr}`);
+        }
+        if (relatedContracts.length > maxContracts) {
+            lines.push(`- ... and ${relatedContracts.length - maxContracts} more contracts`);
+        }
+    }
+    // Concepts owned by this module
+    const conceptIds = store.listConcepts();
+    const ownedConcepts = [];
+    for (const cid of conceptIds) {
+        const concept = store.readConcept(cid);
+        if (concept.layer === moduleId) {
+            ownedConcepts.push(cid);
+        }
+    }
+    if (ownedConcepts.length > 0) {
+        lines.push('');
+        lines.push('### Concepts');
+        const maxConcepts = depth >= 3 ? ownedConcepts.length : 10;
+        const shown = ownedConcepts.slice(0, maxConcepts);
+        lines.push(`- ${shown.join(', ')}${ownedConcepts.length > maxConcepts ? `, ...+${ownedConcepts.length - maxConcepts}` : ''}`);
+    }
+    // Concerns affecting this module
+    const concernIds = store.listConcerns();
+    const affectingConcerns = [];
+    for (const cid of concernIds) {
+        const concern = store.readConcern(cid);
+        if ((concern.affected_modules ?? []).includes(moduleId)) {
+            affectingConcerns.push(concern);
+        }
+    }
+    if (affectingConcerns.length > 0) {
+        lines.push('');
+        lines.push('### Concerns');
+        for (const c of affectingConcerns) {
+            lines.push(`- [${c.type}] ${c.description} (${c.severity})`);
+        }
+    }
+    // Annotations on the module
+    if (mod.annotations && mod.annotations.length > 0) {
+        lines.push('');
+        lines.push('### Annotations');
+        for (const ann of mod.annotations) {
+            const staleTag = ann.stale ? ' [STALE]' : '';
+            lines.push(`- [${ann.type}] ${ann.content} (${ann.author}, ${ann.date})${staleTag}`);
+        }
+    }
+    let result = lines.join('\n');
+    // Enforce token budget
+    const limit = TOKEN_LIMITS.module * 4;
+    if (result.length > limit) {
+        // Truncate: remove file-heavy sections first, cap contracts at 5
+        const truncLines = [];
+        truncLines.push(`## Module: ${moduleId}`);
+        truncLines.push('');
+        truncLines.push(`Entry: ${mod.canonical_entry}`);
+        truncLines.push(`Files: ${mod.files?.length ?? 0}`);
+        truncLines.push(`Dependencies: ${deps.length > 0 ? `→ ${deps}` : '—'}`);
+        truncLines.push(`Depended by: ${revDeps.length > 0 ? `← ${revDeps}` : '—'}`);
+        if (relatedContracts.length > 0) {
+            truncLines.push('');
+            truncLines.push('### Contracts');
+            for (const contract of relatedContracts.slice(0, 5)) {
+                const iface = contract.interface.slice(0, 3).join(', ');
+                truncLines.push(`- ${contract.consumer} → ${contract.provider}: ${iface}`);
+            }
+            if (relatedContracts.length > 5) {
+                truncLines.push(`- ... and ${relatedContracts.length - 5} more`);
+            }
+        }
+        result = truncLines.join('\n');
+    }
+    return result;
+}
+function generateFlowSummary(store, flowId, depth) {
+    const flowIds = store.listFlows();
+    if (!flowIds.includes(flowId)) {
+        return `Flow "${flowId}" not found. Available flows: ${flowIds.join(', ')}`;
+    }
+    const flow = store.readFlow(flowId);
+    const lines = [];
+    lines.push(`## Flow: ${flowId}`);
+    lines.push('');
+    if (flow.type === 'flow') {
+        lines.push(`Trigger: ${flow.trigger ?? '—'}`);
+        lines.push(`Type: flow`);
+        if (flow.steps && flow.steps.length > 0) {
+            lines.push('');
+            lines.push('### Steps');
+            const maxSteps = depth >= 3 ? flow.steps.length : depth >= 2 ? 20 : 10;
+            for (let i = 0; i < Math.min(flow.steps.length, maxSteps); i++) {
+                const step = flow.steps[i];
+                const action = step.action ? `: ${step.action}` : '';
+                lines.push(`${i + 1}. ${step.module}.${step.function}${action}`);
+            }
+            if (flow.steps.length > maxSteps) {
+                lines.push(`... and ${flow.steps.length - maxSteps} more steps`);
+            }
+        }
+        // Error paths from enrichment
+        const errorPaths = normalizeErrorPaths(flow.enriched?.error_paths);
+        if (errorPaths.length > 0) {
+            lines.push('');
+            lines.push('### Error Paths');
+            for (const ep of errorPaths) {
+                lines.push(`- ${ep.condition}: ${ep.behavior}`);
+            }
+        }
+    }
+    else if (flow.type === 'state_machine') {
+        lines.push(`Owner: ${flow.owner_module ?? '—'}`);
+        lines.push(`State field: ${flow.state_field ?? '—'}`);
+        lines.push(`Type: state_machine`);
+        if (flow.states && flow.states.length > 0) {
+            lines.push('');
+            lines.push('### States');
+            for (const s of flow.states) {
+                lines.push(`- ${s.id} (${s.source})`);
+            }
+        }
+        if (flow.transitions && flow.transitions.length > 0) {
+            lines.push('');
+            lines.push('### Transitions');
+            const maxTransitions = depth >= 2 ? 20 : 10;
+            for (const t of flow.transitions.slice(0, maxTransitions)) {
+                lines.push(`- ${t.from} → ${t.to} via ${t.trigger}`);
+            }
+            if (flow.transitions.length > maxTransitions) {
+                lines.push(`- ... and ${flow.transitions.length - maxTransitions} more`);
+            }
+        }
+        // Guards from enrichment
+        if (flow.enriched?.guards && flow.enriched.guards.length > 0) {
+            lines.push('');
+            lines.push('### Guards');
+            for (const g of flow.enriched.guards) {
+                lines.push(`- ${g.transition}: ${g.condition}`);
+            }
+        }
+    }
+    // Annotations
+    if (flow.annotations && flow.annotations.length > 0) {
+        lines.push('');
+        lines.push('### Annotations');
+        for (const ann of flow.annotations) {
+            const staleTag = ann.stale ? ' [STALE]' : '';
+            lines.push(`- [${ann.type}] ${ann.content} (${ann.author}, ${ann.date})${staleTag}`);
+        }
+    }
+    let result = lines.join('\n');
+    // Enforce token budget: truncate steps
+    const limit = TOKEN_LIMITS.flow * 4;
+    if (result.length > limit && flow.steps && flow.steps.length > 0) {
+        const truncLines = [];
+        truncLines.push(`## Flow: ${flowId}`);
+        truncLines.push('');
+        truncLines.push(`Trigger: ${flow.trigger ?? '—'}`);
+        truncLines.push(`Type: flow`);
+        truncLines.push('');
+        truncLines.push('### Steps');
+        // Binary-search for how many steps fit
+        let maxSteps = 10;
+        let candidate = '';
+        while (maxSteps > 1) {
+            truncLines.length = 6; // reset after header lines
+            for (let i = 0; i < Math.min(flow.steps.length, maxSteps); i++) {
+                const step = flow.steps[i];
+                const action = step.action ? `: ${step.action}` : '';
+                truncLines.push(`${i + 1}. ${step.module}.${step.function}${action}`);
+            }
+            if (flow.steps.length > maxSteps) {
+                truncLines.push(`... and ${flow.steps.length - maxSteps} more steps`);
+            }
+            candidate = truncLines.join('\n');
+            if (candidate.length <= limit)
+                break;
+            maxSteps = Math.floor(maxSteps * 0.7);
+        }
+        result = candidate || truncLines.join('\n');
+    }
+    return result;
+}
+function normalizeErrorPaths(value) {
+    if (Array.isArray(value)) {
+        return value.filter((item) => Boolean(item) &&
+            typeof item === 'object' &&
+            typeof item.condition === 'string' &&
+            typeof item.behavior === 'string');
+    }
+    if (typeof value === 'string') {
+        try {
+            return normalizeErrorPaths(JSON.parse(value));
+        }
+        catch {
+            return [];
+        }
+    }
+    return [];
+}
+//# sourceMappingURL=map.js.map

package/dist/commands/map.js.map

@@ -0,0 +1 @@
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package/dist/commands/migrate.d.ts

@@ -0,0 +1,16 @@
+interface MigrationResult {
+    migrated: number;
+    orphaned: number;
+    details: Array<{
+        oldNode: string;
+        layer: string;
+        action: 'migrated' | 'orphaned';
+        target?: string;
+        annotations: number;
+    }>;
+}
+export declare function commandMigrate(projectRoot: string, options: {
+    from?: string;
+    status?: boolean;
+}): Promise<MigrationResult>;
+export {};

package/dist/commands/migrate.js

@@ -0,0 +1,150 @@
+import { CotxStore } from '../store/store.js';
+import fs from 'node:fs';
+import path from 'node:path';
+import yaml from 'js-yaml';
+export async function commandMigrate(projectRoot, options) {
+    const store = new CotxStore(projectRoot);
+    if (!store.exists()) {
+        console.log('No .cotx/ found.');
+        return { migrated: 0, orphaned: 0, details: [] };
+    }
+    if (options.status) {
+        return showMigrationStatus(projectRoot);
+    }
+    const tag = options.from;
+    if (!tag) {
+        console.log('Usage: cotx migrate --from <tag>');
+        return { migrated: 0, orphaned: 0, details: [] };
+    }
+    const snapshotDir = path.join(projectRoot, '.cotx', 'snapshots', tag);
+    if (!fs.existsSync(snapshotDir)) {
+        console.log(`Snapshot "${tag}" not found.`);
+        return { migrated: 0, orphaned: 0, details: [] };
+    }
+    const result = { migrated: 0, orphaned: 0, details: [] };
+    const orphanedAnnotations = [];
+    // Load old snapshot's annotated nodes
+    const layers = ['modules', 'concepts', 'contracts', 'flows'];
+    for (const layer of layers) {
+        const oldDir = path.join(snapshotDir, layer);
+        if (!fs.existsSync(oldDir))
+            continue;
+        const oldFiles = fs.readdirSync(oldDir).filter(f => f.endsWith('.yaml'));
+        const newIds = new Set(layer === 'modules' ? store.listModules() :
+            layer === 'concepts' ? store.listConcepts() :
+                layer === 'contracts' ? store.listContracts() :
+                    store.listFlows());
+        for (const file of oldFiles) {
+            const oldData = yaml.load(fs.readFileSync(path.join(oldDir, file), 'utf-8'));
+            if (!oldData?.annotations || oldData.annotations.length === 0)
+                continue;
+            const oldId = oldData.id ?? file.replace('.yaml', '');
+            const annotations = oldData.annotations;
+            // Strategy 1: Same ID exists in new map
+            if (newIds.has(oldId)) {
+                migrateAnnotations(store, layer, oldId, annotations);
+                result.migrated += annotations.length;
+                result.details.push({ oldNode: oldId, layer, action: 'migrated', target: oldId, annotations: annotations.length });
+                continue;
+            }
+            // Strategy 2: File overlap (modules only)
+            if (layer === 'modules' && oldData.files) {
+                const matchedModule = findModuleByFileOverlap(store, oldData.files);
+                if (matchedModule) {
+                    migrateAnnotations(store, 'modules', matchedModule, annotations);
+                    result.migrated += annotations.length;
+                    result.details.push({ oldNode: oldId, layer, action: 'migrated', target: matchedModule, annotations: annotations.length });
+                    continue;
+                }
+            }
+            // No match → orphan
+            orphanedAnnotations.push({ oldNode: oldId, layer, annotations });
+            result.orphaned += annotations.length;
+            result.details.push({ oldNode: oldId, layer, action: 'orphaned', annotations: annotations.length });
+        }
+    }
+    // Write orphaned annotations
+    if (orphanedAnnotations.length > 0) {
+        const orphanPath = path.join(projectRoot, '.cotx', 'orphaned-annotations.yaml');
+        fs.writeFileSync(orphanPath, yaml.dump(orphanedAnnotations, { lineWidth: 120 }));
+    }
+    // Print summary
+    console.log(`Migration from "${tag}":`);
+    console.log(`  ${result.migrated} annotations migrated`);
+    console.log(`  ${result.orphaned} annotations orphaned`);
+    for (const d of result.details) {
+        if (d.action === 'migrated') {
+            console.log(`  ✓ ${d.layer}/${d.oldNode} → ${d.target} (${d.annotations} annotations)`);
+        }
+        else {
+            console.log(`  ✗ ${d.layer}/${d.oldNode} → orphaned (${d.annotations} annotations)`);
+        }
+    }
+    return result;
+}
+function findModuleByFileOverlap(store, oldFiles) {
+    const oldSet = new Set(oldFiles);
+    let bestMatch = null;
+    let bestOverlap = 0;
+    for (const id of store.listModules()) {
+        const mod = store.readModule(id);
+        const overlap = mod.files.filter(f => oldSet.has(f)).length;
+        const ratio = oldFiles.length > 0 ? overlap / oldFiles.length : 0;
+        if (ratio > 0.6 && ratio > bestOverlap) {
+            bestOverlap = ratio;
+            bestMatch = id;
+        }
+    }
+    return bestMatch;
+}
+function migrateAnnotations(store, layer, nodeId, annotations) {
+    let data;
+    switch (layer) {
+        case 'modules':
+            data = store.readModule(nodeId);
+            break;
+        case 'concepts':
+            data = store.readConcept(nodeId);
+            break;
+        case 'contracts':
+            data = store.readContract(nodeId);
+            break;
+        case 'flows':
+            data = store.readFlow(nodeId);
+            break;
+        default: return;
+    }
+    if (!data.annotations)
+        data.annotations = [];
+    data.annotations.push(...annotations);
+    switch (layer) {
+        case 'modules':
+            store.writeModule(data);
+            break;
+        case 'concepts':
+            store.writeConcept(data);
+            break;
+        case 'contracts':
+            store.writeContract(data);
+            break;
+        case 'flows':
+            store.writeFlow(data);
+            break;
+    }
+}
+function showMigrationStatus(projectRoot) {
+    const orphanPath = path.join(projectRoot, '.cotx', 'orphaned-annotations.yaml');
+    if (fs.existsSync(orphanPath)) {
+        const orphans = yaml.load(fs.readFileSync(orphanPath, 'utf-8'));
+        const count = orphans.reduce((sum, o) => sum + (o.annotations?.length ?? 0), 0);
+        console.log(`Orphaned annotations: ${count} across ${orphans.length} nodes`);
+        for (const o of orphans) {
+            console.log(`  ${o.layer}/${o.oldNode}: ${o.annotations?.length ?? 0} annotations`);
+        }
+    }
+    else {
+        console.log('No orphaned annotations.');
+    }
+    return { migrated: 0, orphaned: 0, details: [] };
+}
+//# sourceMappingURL=migrate.js.map

package/dist/commands/migrate.js.map

@@ -0,0 +1 @@
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package/dist/commands/query.d.ts

@@ -0,0 +1,3 @@
+export declare function commandQuery(projectRoot: string, keyword: string, options: {
+    layer?: string;
+}): Promise<void>;