codeseeker 1.4.0

package/dist/cli/knowledge/graph/managers/graph-query-manager.js

@@ -0,0 +1,306 @@
+"use strict";
+/**
+ * Graph Query Manager
+ * Handles all query operations and search functionality
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.GraphQueryManager = void 0;
+const logger_1 = require("../../../../utils/logger");
+class GraphQueryManager {
+    logger = logger_1.Logger.getInstance().child('GraphQueryManager');
+    async queryNodes(query, databaseService, stateManager) {
+        // Delegate to database service for complex queries, fallback to in-memory for simple ones
+        try {
+            return await databaseService.queryNodes(query);
+        }
+        catch (error) {
+            this.logger.warn('Database query failed, using in-memory fallback:', error);
+            return this.queryNodesInMemory(query, stateManager);
+        }
+    }
+    async queryTriads(query, databaseService, stateManager) {
+        // Delegate to database service for complex queries, fallback to in-memory for simple ones
+        try {
+            return await databaseService.queryTriads(query);
+        }
+        catch (error) {
+            this.logger.warn('Database query failed, using in-memory fallback:', error);
+            return this.queryTriadsInMemory(query, stateManager);
+        }
+    }
+    queryNodesInMemory(query, stateManager) {
+        let candidateNodes = Array.from(stateManager.getNodes().values());
+        // Apply node type filter
+        if (query.nodes?.types) {
+            const typeNodes = new Set();
+            query.nodes.types.forEach(type => {
+                stateManager.getNodeIndex().get(type)?.forEach(id => typeNodes.add(id));
+            });
+            candidateNodes = candidateNodes.filter(node => typeNodes.has(node.id));
+        }
+        // Apply confidence filter
+        if (query.confidence !== undefined) {
+            candidateNodes = candidateNodes.filter(node => (node.metadata?.confidence ?? 1.0) >= query.confidence);
+        }
+        // Apply metadata filters
+        if (query.metadata) {
+            candidateNodes = candidateNodes.filter(node => this.matchesMetadata(node.metadata, query.metadata));
+        }
+        // Apply name filter
+        if (query.nodes?.names) {
+            candidateNodes = candidateNodes.filter(node => query.nodes.names.some(name => node.name?.includes(name) || node.metadata?.name?.includes(name)));
+        }
+        return candidateNodes.slice(0, query.limit || 100);
+    }
+    queryTriadsInMemory(query, stateManager) {
+        let candidateTriads = Array.from(stateManager.getTriads().values());
+        // Apply predicate filter
+        if (query.triads?.predicates) {
+            const relationTriads = new Set();
+            query.triads.predicates.forEach(predicate => {
+                stateManager.getRelationIndex().get(predicate)?.forEach(id => relationTriads.add(id));
+            });
+            candidateTriads = candidateTriads.filter(triad => relationTriads.has(triad.id));
+        }
+        // Apply subject filter
+        if (query.subject) {
+            candidateTriads = candidateTriads.filter(triad => triad.subject === query.subject);
+        }
+        // Apply object filter
+        if (query.object) {
+            candidateTriads = candidateTriads.filter(triad => triad.object === query.object);
+        }
+        // Apply predicate filter (direct)
+        if (query.predicate) {
+            candidateTriads = candidateTriads.filter(triad => triad.predicate === query.predicate);
+        }
+        // Apply confidence filter
+        if (query.confidence !== undefined) {
+            candidateTriads = candidateTriads.filter(triad => (triad.confidence ?? 1.0) >= query.confidence);
+        }
+        return candidateTriads.slice(0, query.limit || 100);
+    }
+    findNodeById(id, stateManager) {
+        return stateManager.getNodes().get(id);
+    }
+    findTriadById(id, stateManager) {
+        return stateManager.getTriads().get(id);
+    }
+    findNodesByType(type, stateManager) {
+        const nodeIds = stateManager.getNodeIndex().get(type) || new Set();
+        return Array.from(nodeIds)
+            .map(id => stateManager.getNodes().get(id))
+            .filter(Boolean);
+    }
+    findTriadsByRelation(relation, stateManager) {
+        const triadIds = stateManager.getRelationIndex().get(relation) || new Set();
+        return Array.from(triadIds)
+            .map(id => stateManager.getTriads().get(id))
+            .filter(Boolean);
+    }
+    findConnectedNodes(nodeId, stateManager) {
+        const connectedNodes = new Set();
+        for (const triad of stateManager.getTriads().values()) {
+            if (triad.subject === nodeId) {
+                connectedNodes.add(triad.object);
+            }
+            else if (triad.object === nodeId) {
+                connectedNodes.add(triad.subject);
+            }
+        }
+        connectedNodes.delete(nodeId); // Remove self
+        return Array.from(connectedNodes);
+    }
+    findNodesByMetadata(metadata, stateManager) {
+        return Array.from(stateManager.getNodes().values())
+            .filter(node => this.matchesMetadata(node.metadata, metadata));
+    }
+    findTriadsBySubject(subjectId, stateManager) {
+        return Array.from(stateManager.getTriads().values())
+            .filter(triad => triad.subject === subjectId);
+    }
+    findTriadsByObject(objectId, stateManager) {
+        return Array.from(stateManager.getTriads().values())
+            .filter(triad => triad.object === objectId);
+    }
+    // Advanced query operations
+    /**
+     * Find nodes within N degrees of separation from a starting node
+     */
+    findNodesWithinDegrees(startNodeId, degrees, stateManager) {
+        const visited = new Set();
+        const queue = [{ nodeId: startNodeId, degree: 0 }];
+        const result = [];
+        while (queue.length > 0) {
+            const { nodeId, degree } = queue.shift();
+            if (visited.has(nodeId) || degree > degrees)
+                continue;
+            visited.add(nodeId);
+            if (degree > 0) { // Don't include the starting node
+                result.push(nodeId);
+            }
+            if (degree < degrees) {
+                const connected = this.findConnectedNodes(nodeId, stateManager);
+                for (const connectedId of connected) {
+                    if (!visited.has(connectedId)) {
+                        queue.push({ nodeId: connectedId, degree: degree + 1 });
+                    }
+                }
+            }
+        }
+        return result;
+    }
+    /**
+     * Find shortest path between two nodes
+     */
+    findShortestPath(startNodeId, endNodeId, stateManager) {
+        if (startNodeId === endNodeId)
+            return [startNodeId];
+        const visited = new Set();
+        const queue = [{ nodeId: startNodeId, path: [startNodeId] }];
+        while (queue.length > 0) {
+            const { nodeId, path } = queue.shift();
+            if (visited.has(nodeId))
+                continue;
+            visited.add(nodeId);
+            if (nodeId === endNodeId) {
+                return path;
+            }
+            const connected = this.findConnectedNodes(nodeId, stateManager);
+            for (const connectedId of connected) {
+                if (!visited.has(connectedId)) {
+                    queue.push({
+                        nodeId: connectedId,
+                        path: [...path, connectedId]
+                    });
+                }
+            }
+        }
+        return []; // No path found
+    }
+    /**
+     * Find all cycles in the graph starting from a node
+     */
+    findCycles(startNodeId, stateManager, maxDepth = 10) {
+        const cycles = [];
+        const visited = new Set();
+        const dfs = (nodeId, path, depth) => {
+            if (depth > maxDepth)
+                return;
+            const cycleIndex = path.indexOf(nodeId);
+            if (cycleIndex !== -1) {
+                // Found a cycle
+                const cycle = path.slice(cycleIndex);
+                if (cycle.length > 2) { // Ignore trivial cycles
+                    cycles.push(cycle);
+                }
+                return;
+            }
+            if (visited.has(nodeId))
+                return;
+            const newPath = [...path, nodeId];
+            const connected = this.findConnectedNodes(nodeId, stateManager);
+            for (const connectedId of connected) {
+                dfs(connectedId, newPath, depth + 1);
+            }
+        };
+        dfs(startNodeId, [], 0);
+        return cycles;
+    }
+    /**
+     * Get node degree (number of connections)
+     */
+    getNodeDegree(nodeId, stateManager) {
+        let inDegree = 0;
+        let outDegree = 0;
+        for (const triad of stateManager.getTriads().values()) {
+            if (triad.subject === nodeId) {
+                outDegree++;
+            }
+            if (triad.object === nodeId) {
+                inDegree++;
+            }
+        }
+        return {
+            in: inDegree,
+            out: outDegree,
+            total: inDegree + outDegree
+        };
+    }
+    /**
+     * Find hub nodes (nodes with high degree)
+     */
+    findHubNodes(stateManager, threshold = 5) {
+        const hubs = [];
+        for (const nodeId of stateManager.getNodes().keys()) {
+            const degree = this.getNodeDegree(nodeId, stateManager).total;
+            if (degree >= threshold) {
+                hubs.push({ nodeId, degree });
+            }
+        }
+        return hubs.sort((a, b) => b.degree - a.degree);
+    }
+    // Helper methods
+    matchesMetadata(nodeMetadata, queryMetadata) {
+        if (!nodeMetadata || !queryMetadata)
+            return false;
+        return Object.entries(queryMetadata).every(([key, value]) => {
+            const nodeValue = nodeMetadata[key];
+            // Handle different types of matching
+            if (Array.isArray(value)) {
+                return Array.isArray(nodeValue) &&
+                    value.some(v => nodeValue.includes(v));
+            }
+            if (typeof value === 'string' && typeof nodeValue === 'string') {
+                return nodeValue.toLowerCase().includes(value.toLowerCase());
+            }
+            return nodeValue === value;
+        });
+    }
+    matchesNodeFilter(node, filters) {
+        if (!filters)
+            return true;
+        if (filters.types && !filters.types.includes(node.type))
+            return false;
+        if (filters.names && !filters.names.some((name) => node.name?.includes(name) || node.metadata?.name?.includes(name)))
+            return false;
+        if (filters.namespaces && node.metadata?.namespace &&
+            !filters.namespaces.includes(node.metadata.namespace))
+            return false;
+        return true;
+    }
+    // Statistics and analytics
+    /**
+     * Get query performance statistics
+     */
+    getQueryStats(stateManager) {
+        const totalNodes = stateManager.getNodeCount();
+        const totalTriads = stateManager.getTriadCount();
+        let totalDegree = 0;
+        let maxDegree = 0;
+        for (const nodeId of stateManager.getNodes().keys()) {
+            const degree = this.getNodeDegree(nodeId, stateManager).total;
+            totalDegree += degree;
+            maxDegree = Math.max(maxDegree, degree);
+        }
+        const averageDegree = totalNodes > 0 ? totalDegree / totalNodes : 0;
+        const nodeTypeDistribution = {};
+        for (const node of stateManager.getNodes().values()) {
+            nodeTypeDistribution[node.type] = (nodeTypeDistribution[node.type] || 0) + 1;
+        }
+        const relationTypeDistribution = {};
+        for (const triad of stateManager.getTriads().values()) {
+            relationTypeDistribution[triad.predicate] = (relationTypeDistribution[triad.predicate] || 0) + 1;
+        }
+        return {
+            totalNodes,
+            totalTriads,
+            averageDegree,
+            maxDegree,
+            nodeTypeDistribution,
+            relationTypeDistribution
+        };
+    }
+}
+exports.GraphQueryManager = GraphQueryManager;
+//# sourceMappingURL=graph-query-manager.js.map

package/dist/cli/knowledge/graph/managers/graph-query-manager.js.map

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package/dist/cli/knowledge/graph/managers/graph-state-manager.d.ts

@@ -0,0 +1,70 @@
+/**
+ * Graph State Manager
+ * Manages the in-memory state of nodes, triads, and indexes
+ */
+import { KnowledgeNode, KnowledgeTriad, NodeType, RelationType } from '../types';
+import { IGraphDatabaseService } from '../services/graph-database-service';
+import { IGraphUtilityService } from '../services/graph-utility-service';
+export interface IGraphStateManager {
+    getNodes(): Map<string, KnowledgeNode>;
+    getTriads(): Map<string, KnowledgeTriad>;
+    getNodeIndex(): Map<NodeType, Set<string>>;
+    getRelationIndex(): Map<RelationType, Set<string>>;
+    initializeIndexes(): void;
+    rebuildIndexes(): void;
+    loadState(databaseService: IGraphDatabaseService): Promise<void>;
+    addNode(node: Omit<KnowledgeNode, 'id' | 'createdAt' | 'updatedAt'>, utilityService: IGraphUtilityService, databaseService: IGraphDatabaseService): Promise<string>;
+    updateNode(nodeId: string, updates: Partial<KnowledgeNode>): Promise<void>;
+    removeNode(nodeId: string): Promise<void>;
+    addTriad(triad: Omit<KnowledgeTriad, 'id' | 'createdAt'>, utilityService: IGraphUtilityService, databaseService: IGraphDatabaseService): Promise<string>;
+    updateTriad(triadId: string, updates: Partial<KnowledgeTriad>): Promise<void>;
+    removeTriad(triadId: string): Promise<void>;
+    getNodeCount(): number;
+    getTriadCount(): number;
+    validateState(): {
+        isValid: boolean;
+        errors: string[];
+    };
+    getMemoryUsage(): {
+        nodes: number;
+        triads: number;
+        indexes: number;
+        total: number;
+    };
+}
+export declare class GraphStateManager implements IGraphStateManager {
+    private logger;
+    private nodes;
+    private triads;
+    private nodeIndex;
+    private relationIndex;
+    getNodes(): Map<string, KnowledgeNode>;
+    getTriads(): Map<string, KnowledgeTriad>;
+    getNodeIndex(): Map<NodeType, Set<string>>;
+    getRelationIndex(): Map<RelationType, Set<string>>;
+    initializeIndexes(): void;
+    rebuildIndexes(): void;
+    loadState(databaseService: IGraphDatabaseService): Promise<void>;
+    addNode(node: Omit<KnowledgeNode, 'id' | 'createdAt' | 'updatedAt'>, utilityService: IGraphUtilityService, databaseService: IGraphDatabaseService): Promise<string>;
+    addTriad(triad: Omit<KnowledgeTriad, 'id' | 'createdAt'>, utilityService: IGraphUtilityService, databaseService: IGraphDatabaseService): Promise<string>;
+    updateNode(nodeId: string, updates: Partial<KnowledgeNode>): Promise<void>;
+    updateTriad(triadId: string, updates: Partial<KnowledgeTriad>): Promise<void>;
+    removeNode(nodeId: string): Promise<void>;
+    removeTriad(triadId: string): Promise<void>;
+    getNodeCount(): number;
+    getTriadCount(): number;
+    getNodesByType(type: NodeType): KnowledgeNode[];
+    getTriadsByRelation(relation: RelationType): KnowledgeTriad[];
+    validateState(): {
+        isValid: boolean;
+        errors: string[];
+    };
+    getMemoryUsage(): {
+        nodes: number;
+        triads: number;
+        indexes: number;
+        total: number;
+    };
+    clear(): void;
+}
+//# sourceMappingURL=graph-state-manager.d.ts.map

package/dist/cli/knowledge/graph/managers/graph-state-manager.d.ts.map

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package/dist/cli/knowledge/graph/managers/graph-state-manager.js

@@ -0,0 +1,249 @@
+"use strict";
+/**
+ * Graph State Manager
+ * Manages the in-memory state of nodes, triads, and indexes
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.GraphStateManager = void 0;
+const types_1 = require("../types");
+const logger_1 = require("../../../../utils/logger");
+class GraphStateManager {
+    logger = logger_1.Logger.getInstance().child('GraphStateManager');
+    nodes = new Map();
+    triads = new Map();
+    nodeIndex = new Map();
+    relationIndex = new Map();
+    getNodes() {
+        return this.nodes;
+    }
+    getTriads() {
+        return this.triads;
+    }
+    getNodeIndex() {
+        return this.nodeIndex;
+    }
+    getRelationIndex() {
+        return this.relationIndex;
+    }
+    initializeIndexes() {
+        // Initialize type and relation indexes for fast queries
+        Object.values(types_1.NodeType).forEach(type => {
+            this.nodeIndex.set(type, new Set());
+        });
+        Object.values(types_1.RelationType).forEach(relation => {
+            this.relationIndex.set(relation, new Set());
+        });
+        this.logger.debug('Initialized graph indexes');
+    }
+    rebuildIndexes() {
+        // Clear existing indexes
+        this.nodeIndex.forEach(set => set.clear());
+        this.relationIndex.forEach(set => set.clear());
+        // Rebuild node indexes
+        for (const node of this.nodes.values()) {
+            const typeSet = this.nodeIndex.get(node.type);
+            if (typeSet) {
+                typeSet.add(node.id);
+            }
+        }
+        // Rebuild relation indexes
+        for (const triad of this.triads.values()) {
+            const relationSet = this.relationIndex.get(triad.predicate);
+            if (relationSet) {
+                relationSet.add(triad.id);
+            }
+        }
+        this.logger.debug('Graph indexes rebuilt');
+    }
+    async loadState(databaseService) {
+        try {
+            // Load existing data from database
+            this.nodes = await databaseService.loadNodes();
+            this.triads = await databaseService.loadTriads();
+            this.logger.debug(`Loaded ${this.nodes.size} nodes and ${this.triads.size} triads`);
+            // Rebuild indexes after loading
+            this.rebuildIndexes();
+        }
+        catch (error) {
+            // Don't throw - graceful fallback when database unavailable
+            this.logger.debug('Graph state using in-memory mode (database unavailable)');
+        }
+    }
+    async addNode(node, utilityService, databaseService) {
+        const id = utilityService.generateNodeId(node.type, node.metadata?.name || 'unnamed', node.metadata?.namespace);
+        const now = new Date();
+        const knowledgeNode = {
+            ...node,
+            id,
+            createdAt: now,
+            updatedAt: now
+        };
+        // Update in-memory structures
+        this.nodes.set(id, knowledgeNode);
+        const typeSet = this.nodeIndex.get(node.type);
+        if (typeSet) {
+            typeSet.add(id);
+        }
+        // Persist to database via service (don't throw on failure)
+        try {
+            await databaseService.saveNode(knowledgeNode);
+        }
+        catch (error) {
+            // Keep node in memory even if database save fails
+            this.logger.debug(`Node ${id} saved to memory only (database unavailable)`);
+        }
+        this.logger.debug(`Added node ${id} of type ${node.type}`);
+        return id;
+    }
+    async addTriad(triad, utilityService, databaseService) {
+        const id = utilityService.generateTriadId(triad.subject, triad.predicate, triad.object);
+        const now = new Date();
+        const knowledgeTriad = {
+            ...triad,
+            id,
+            createdAt: now
+        };
+        // Update in-memory structures
+        this.triads.set(id, knowledgeTriad);
+        const relationSet = this.relationIndex.get(triad.predicate);
+        if (relationSet) {
+            relationSet.add(id);
+        }
+        // Persist to database via service (don't throw on failure)
+        try {
+            await databaseService.saveTriad(knowledgeTriad);
+        }
+        catch (error) {
+            // Keep triad in memory even if database save fails
+            this.logger.debug(`Triad ${id} saved to memory only (database unavailable)`);
+        }
+        this.logger.debug(`Added triad ${id}: ${triad.subject} -> ${triad.predicate} -> ${triad.object}`);
+        return id;
+    }
+    async updateNode(nodeId, updates) {
+        const node = this.nodes.get(nodeId);
+        if (node) {
+            const updatedNode = { ...node, ...updates, updatedAt: new Date() };
+            this.nodes.set(nodeId, updatedNode);
+            this.logger.debug(`Updated node ${nodeId}`);
+        }
+        else {
+            throw new Error(`Node ${nodeId} not found`);
+        }
+    }
+    async updateTriad(triadId, updates) {
+        const triad = this.triads.get(triadId);
+        if (triad) {
+            const updatedTriad = { ...triad, ...updates };
+            this.triads.set(triadId, updatedTriad);
+            this.logger.debug(`Updated triad ${triadId}`);
+        }
+        else {
+            throw new Error(`Triad ${triadId} not found`);
+        }
+    }
+    async removeNode(nodeId) {
+        if (this.nodes.delete(nodeId)) {
+            // Remove from indexes
+            this.nodeIndex.forEach(set => set.delete(nodeId));
+            this.logger.debug(`Removed node ${nodeId}`);
+        }
+        else {
+            throw new Error(`Node ${nodeId} not found`);
+        }
+    }
+    async removeTriad(triadId) {
+        if (this.triads.delete(triadId)) {
+            // Remove from indexes
+            this.relationIndex.forEach(set => set.delete(triadId));
+            this.logger.debug(`Removed triad ${triadId}`);
+        }
+        else {
+            throw new Error(`Triad ${triadId} not found`);
+        }
+    }
+    // Utility methods for state inspection
+    getNodeCount() {
+        return this.nodes.size;
+    }
+    getTriadCount() {
+        return this.triads.size;
+    }
+    getNodesByType(type) {
+        const nodeIds = this.nodeIndex.get(type) || new Set();
+        return Array.from(nodeIds).map(id => this.nodes.get(id)).filter(Boolean);
+    }
+    getTriadsByRelation(relation) {
+        const triadIds = this.relationIndex.get(relation) || new Set();
+        return Array.from(triadIds).map(id => this.triads.get(id)).filter(Boolean);
+    }
+    // State validation
+    validateState() {
+        const errors = [];
+        let isValid = true;
+        // Check for orphaned triads (triads referencing non-existent nodes)
+        for (const triad of this.triads.values()) {
+            if (!this.nodes.has(triad.subject)) {
+                errors.push(`Triad ${triad.id} references non-existent subject node ${triad.subject}`);
+                isValid = false;
+            }
+            if (!this.nodes.has(triad.object)) {
+                errors.push(`Triad ${triad.id} references non-existent object node ${triad.object}`);
+                isValid = false;
+            }
+        }
+        // Check index consistency
+        for (const [type, nodeIds] of this.nodeIndex.entries()) {
+            for (const nodeId of nodeIds) {
+                const node = this.nodes.get(nodeId);
+                if (!node) {
+                    errors.push(`Node index contains non-existent node ${nodeId} for type ${type}`);
+                    isValid = false;
+                }
+                else if (node.type !== type) {
+                    errors.push(`Node ${nodeId} has type ${node.type} but is indexed under ${type}`);
+                    isValid = false;
+                }
+            }
+        }
+        for (const [relation, triadIds] of this.relationIndex.entries()) {
+            for (const triadId of triadIds) {
+                const triad = this.triads.get(triadId);
+                if (!triad) {
+                    errors.push(`Triad index contains non-existent triad ${triadId} for relation ${relation}`);
+                    isValid = false;
+                }
+                else if (triad.predicate !== relation) {
+                    errors.push(`Triad ${triadId} has predicate ${triad.predicate} but is indexed under ${relation}`);
+                    isValid = false;
+                }
+            }
+        }
+        if (!isValid) {
+            this.logger.warn(`Graph state validation failed with ${errors.length} errors`);
+        }
+        return { isValid, errors };
+    }
+    // Memory usage estimation
+    getMemoryUsage() {
+        const nodeMemory = this.nodes.size * 1024; // Rough estimate
+        const triadMemory = this.triads.size * 512; // Rough estimate
+        const indexMemory = (this.nodeIndex.size + this.relationIndex.size) * 256; // Rough estimate
+        return {
+            nodes: nodeMemory,
+            triads: triadMemory,
+            indexes: indexMemory,
+            total: nodeMemory + triadMemory + indexMemory
+        };
+    }
+    // Clear all state
+    clear() {
+        this.nodes.clear();
+        this.triads.clear();
+        this.nodeIndex.forEach(set => set.clear());
+        this.relationIndex.forEach(set => set.clear());
+        this.logger.info('Graph state cleared');
+    }
+}
+exports.GraphStateManager = GraphStateManager;
+//# sourceMappingURL=graph-state-manager.js.map

package/dist/cli/knowledge/graph/managers/graph-state-manager.js.map

@@ -0,0 +1 @@
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