citeclaw 2.0.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +202 -0
- package/README.md +152 -0
- package/app.js +318 -0
- package/config.dev.yaml +124 -0
- package/config.prod.yaml +123 -0
- package/config.yaml +0 -0
- package/lib/Citation.js +101 -0
- package/lib/CitoidError.js +61 -0
- package/lib/CitoidRequest.js +150 -0
- package/lib/CitoidResponse.js +44 -0
- package/lib/CitoidService.js +1118 -0
- package/lib/Exporter.js +1052 -0
- package/lib/OutgoingRequestThrottle.js +96 -0
- package/lib/Scraper.js +617 -0
- package/lib/Translator.js +76 -0
- package/lib/ZoteroService.js +220 -0
- package/lib/api-util.js +125 -0
- package/lib/external-apis/CrossRefService.js +122 -0
- package/lib/external-apis/OpenAlexService.js +245 -0
- package/lib/external-apis/PubMedService.js +82 -0
- package/lib/external-apis/SemanticScholarService.js +221 -0
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- package/lib/zotero/cachedTypes.js +232 -0
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- package/package.json +121 -0
- package/routes/citoid.js +101 -0
- package/routes/info.js +81 -0
- package/routes/root.js +51 -0
- package/scripts/botcite.js +5021 -0
- package/scripts/citeclaw.js +10 -0
- package/server.js +12 -0
- package/spec.yaml +156 -0
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- package/vendor/zotero/src/translators.js +264 -0
- package/vendor/zotero/src/utilities.js +49 -0
- package/vendor/zotero/src/webEndpoint.js +113 -0
- package/vendor/zotero/src/webSession.js +476 -0
- package/vendor/zotero/src/zotero.js +117 -0
- package/vendor/zotero/translate_export +10 -0
- package/vendor/zotero/translate_search +9 -0
- package/vendor/zotero/translate_url +9 -0
- package/vendor/zotero/translate_url_multiple +9 -0
- package/vendor/zotero/translate_url_single +9 -0
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{
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"translatorID": "2a5dc3ed-ee5e-4bfb-baad-36ae007e40ce",
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"label": "DeGruyter",
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"creator": "Sebastian Karcher",
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"target": "^https?://www\\.degruyter\\.com",
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"minVersion": "2.1.9",
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"maxVersion": "",
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"priority": 100,
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"inRepository": true,
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"translatorType": 4,
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"browserSupport": "gcsib",
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"lastUpdated": "2017-08-28 07:31:18"
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}
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/*
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DeGruyter (Replacing BE Press - based on BioMed Central Translator)
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Copyright (C) 2012 Sebastian Karcher and Avram Lyon, ajlyon@gmail.com
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This program is free software: you can redistribute it and/or modify
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it under the terms of the GNU Affero General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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This program is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU Affero General Public License for more details.
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You should have received a copy of the GNU Affero General Public License
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along with this program. If not, see <http://www.gnu.org/licenses/>.
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*/
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function detectWeb(doc,url) {
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if( doc.body.classList.contains('journalArticle') || doc.body.classList.contains('page-viewdatabaseentry') ) {
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return "journalArticle";
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}
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if( doc.body.classList.contains('page-viewbook') || doc.body.classList.contains('page-viewbooktoc')) {
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return "book";
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}
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if(doc.body.classList.contains('page-viewbookchapter')) {
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return "bookSection";
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}
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if( (doc.body.classList.contains('page-search') || doc.body.classList.contains('page-searchwithinbase') || doc.body.classList.contains('page-databasecontent') || doc.body.classList.contains('page-viewjournalissue')) && getSearchResults(doc, url)) {
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return "multiple";
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}
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//page-viewjournal --> full/whole journal (type in Zotero is planned)
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return false;
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}
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function getSearchResults(doc, url) {
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var items = {}, found = false, title;
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var results = doc.getElementsByClassName('contentItem');
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var searchEnvironment = doc.body.classList.contains('page-search') || doc.body.classList.contains('page-searchwithinbase') || doc.body.classList.contains('page-databasecontent');
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for(var i=0; i<results.length; i++) {
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if( searchEnvironment ) {
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//if we're searching titles, we can for example not handle databases or ebook packages
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if (results[i].classList.contains('book') ||
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results[i].classList.contains('textbook') ||
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results[i].classList.contains('nlm-article') ||
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results[i].classList.contains('chapter') ||
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results[i].classList.contains('wdg-biblio-record')) {
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title = ZU.xpath(results[i], './/h2[contains(@class,"itemTitle")]/a')[0];
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}
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} else {//view issue
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title = ZU.xpath(results[i],'.//h3/a')[0];
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}
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if(!title || !title.href) continue;
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found = true;
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items[title.href] = ZU.trimInternal(title.textContent);
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}
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return found ? items : false;
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}
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function doWeb(doc, url) {
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if (detectWeb(doc, url) == "multiple") {
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var hits = getSearchResults(doc, url);
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var urls = [];
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Z.selectItems(hits, function(items) {
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if (items == null) return true;
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for (var j in items) {
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urls.push(j);
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}
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ZU.processDocuments(urls, scrapeRIS);
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});
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} else {
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scrapeRIS(doc, url);
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}
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}
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function scrapeRIS(doc, url) {
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var urlCite = ZU.xpathText(doc,'(//li[@class="cite"])[1]/a/@href');
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var productId = urlCite.replace('/dg/cite/', '').replace(/[?#].*$/, '');
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var abstract = doc.getElementById('overviewContent') ||
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ZU.xpath(doc,'//div[@class="articleBody_abstract"]/p')[0] ||
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ZU.xpath(doc,'//div[@class="articleBody_transAbstract"]/p')[0];
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var pdfUrl = ZU.xpathText(doc,'//div[contains(@class, "fullContentLink")]/a[@class="pdf-link"]/@href');
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var tags = ZU.xpath(doc, '//meta[@name="citation_keywords"]/@content');
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var biblRemark = doc.getElementById('biblRemark');
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//at the moment the page (end)numbers are not part of the RIS
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//but the information is in the meta tags
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var firstPage = ZU.xpathText(doc, '//meta[@name="citation_firstpage"]/@content');
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var lastPage = ZU.xpathText(doc, '//meta[@name="citation_lastpage"]/@content');
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ZU.doGet("/dg/cite:exportcitation/ris?t:ac="+productId+"/$N", function(risData) {
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if (risData.indexOf("<") == 0) {
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Z.debug("No RIS");
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scrapeMetadata(doc);
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} else {
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if (detectWeb(doc, url) == "bookSection") {
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risData = risData.replace("TY - GENERIC", "TY - CHAP");
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}
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var trans = Zotero.loadTranslator('import');
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trans.setTranslator('32d59d2d-b65a-4da4-b0a3-bdd3cfb979e7');//https://github.com/zotero/translators/blob/master/RIS.js
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trans.setString(risData);
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trans.setHandler('itemDone', function (obj, item) {
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//for debugging
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//item.notes.push({note:risData});
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//add endpage if missing
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if (item.pages && item.pages.indexOf("-") == -1 && lastPage) {
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if (firstPage == item.pages) {
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item.pages += "–" + lastPage;
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}
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}
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//correct authors from RIS data
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//they are of the form lastname firstname withouth a comma
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//e.g., AU - Meggitt Justin J.
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for(var i=0; i<item.creators.length; i++) {
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if (item.creators[i].fieldMode == 1) {
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var splitPos = item.creators[i].lastName.indexOf(" ");
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item.creators[i].firstName = item.creators[i].lastName.substr( splitPos+1 );
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item.creators[i].lastName = item.creators[i].lastName.substr( 0, splitPos);
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delete item.creators[i].fieldMode;
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}
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}
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//add hyphen in ISSN if missing
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if (item.ISSN) {
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item.ISSN = ZU.cleanISSN(item.ISSN);
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}
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//add abstract
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if (abstract) {
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abstract = abstract.textContent
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.replace(/\u0092/g,"’")
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.replace(/\u0093/g,"“")
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.replace(/\u0094/g,"”");
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item.abstractNote = ZU.trimInternal(abstract);
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}
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//biblRemark e.g. edition maybe more
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if (biblRemark) {
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if ((item.itemType == "book" || item.itemType == "bookSection") && !item.edition) {
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item.edition = biblRemark.textContent;
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} else {
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item.notes.push({ note : biblRemark.textContent});
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}
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}
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//url is saved in RIS withouth the http(s) protocoll
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item.url = url;
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//journalAbbreviations are more like internal codes
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//they don't make sense for citations
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delete item.journalAbbreviation;
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if (item.tags.length == 0 && tags && tags.length > 0) {
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for (var i=0; i<tags.length; i++) {
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item.tags.push(tags[i].textContent.replace(/[,.]$/, ''));
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}
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}
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if (pdfUrl) {
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//Z.debug(pdfUrl);
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item.attachments.push({
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url: pdfUrl,
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title: "Full Text PDF",
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mimeType: "application/pdf"
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});
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}
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item.complete();
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});
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trans.translate();
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}
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});
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}
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function scrapeMetadata(doc, url) {
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//the highwire meta tags are now part of the body and not head
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//which we have to correct here before calling EM translator
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var head = doc.getElementsByTagName('head');
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var metasInBody = ZU.xpath(doc, '//body/div/meta');
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for (var i=0; i<metasInBody.length; i++) {
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head[0].append(metasInBody[i]);
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}
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// We call the Embedded Metadata translator
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var translator = Zotero.loadTranslator("web");
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translator.setTranslator("951c027d-74ac-47d4-a107-9c3069ab7b48");
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translator.setHandler("itemDone", function(obj, item) {
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item.abstractNote = ZU.xpathText(doc, '//div[@class="articleBody_abstract"]');
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var doi = ZU.xpathText(doc, '(//a[@itemprop="citation_doi"])[1]/@href');
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if (doi) {
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var start = doi.indexOf('10.');
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item.DOI = doi.substr(start);
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}
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item.complete();
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});
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translator.setDocument(doc);
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translator.translate();
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}
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/** BEGIN TEST CASES **/
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var testCases = [
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{
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"type": "web",
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"url": "http://www.degruyter.com/view/j/for.2011.9.issue-4/issue-files/for.2011.9.issue-4.xml",
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"items": "multiple"
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},
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{
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"type": "web",
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"url": "https://www.degruyter.com/view/j/for.2011.8.4_20120105083457/for.2011.8.4/for.2011.8.4.1405/for.2011.8.4.1405.xml?format=INT",
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"items": [
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{
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"itemType": "journalArticle",
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"title": "The Midterm Landslide of 2010: A Triple Wave Election",
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"creators": [
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{
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"lastName": "Campbell",
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"creatorType": "author",
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"firstName": "James E."
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}
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],
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"date": "2011",
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"DOI": "10.2202/1540-8884.1405",
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"ISSN": "1540-8884",
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"abstractNote": "Democrats were trounced in the 2010 midterm elections. They lost six seats in the U.S. Senate, six governorships, and about 700 seats in state legislatures. Compared to 2008, Democrats lost 64 seats in the House and Republicans regained their House majority. The Republican majority elected in 2010 was the largest number of Republicans elected since 1946. The analysis finds that Republican seat gains resulted from the receding of the pro-Democratic waves of 2006 and 2008 as well as the incoming pro-Republican wave of 2010. Voters rejected Democrats in 2010 for their failure to revive the economy, but also for their advancement of the national healthcare reform and other liberal policies. The analysis speculates that Democrats are likely to gain House seats and lose Senate seats in 2012. Finally, President Obama’s prospects of re-election have probably been improved because of the Republican gains in the 2010 midterm.",
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"issue": "4",
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"libraryCatalog": "DeGruyter",
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"publicationTitle": "The Forum",
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"shortTitle": "The Midterm Landslide of 2010",
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"url": "https://www.degruyter.com/view/j/for.2011.8.4_20120105083457/for.2011.8.4/for.2011.8.4.1405/for.2011.8.4.1405.xml?format=INT",
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"volume": "8",
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"attachments": [
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{
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"title": "Full Text PDF",
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"mimeType": "application/pdf"
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}
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],
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"tags": [
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"congress",
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"economy",
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"elections",
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"midterm elections",
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"polarization",
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"political parties",
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"presidency",
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"presidential approval",
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"retrospective voting",
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"voting"
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],
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"notes": [],
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"seeAlso": []
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}
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]
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},
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{
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"type": "web",
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"url": "https://www.degruyter.com/view/j/ev.2010.7.4/ev.2010.7.4.1796/ev.2010.7.4.1796.xml?format=INT",
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"items": [
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{
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"itemType": "journalArticle",
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"title": "Comment on Nordhaus: Carbon Tax Calculations",
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"creators": [
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{
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"lastName": "Bauman",
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"creatorType": "author",
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"firstName": "Yoram"
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}
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],
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"date": "2010",
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"DOI": "10.2202/1553-3832.1796",
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120
|
+
"*QUALITATIVE PHYSICS",
|
|
121
|
+
"*QUALITATIVE REASONING",
|
|
122
|
+
"*SYSTEMS ANALYSIS",
|
|
123
|
+
"COMPLEXITY ANALYSIS",
|
|
124
|
+
"Cybernetics",
|
|
125
|
+
"DATMI(DYNAMIC ACROSS-TIME MEASUREMENT INTERPRETATION)",
|
|
126
|
+
"DEPENDENCY PATHS",
|
|
127
|
+
"DURATION CONSTRAINTS",
|
|
128
|
+
"ENVISIONMENTS",
|
|
129
|
+
"EXPLANATION",
|
|
130
|
+
"FAULTY DATA",
|
|
131
|
+
"INTERPRETATION CREDIBILITIES",
|
|
132
|
+
"MEASUREMENT INTERPRETATION",
|
|
133
|
+
"MONITORING",
|
|
134
|
+
"PINTERP SPACE",
|
|
135
|
+
"PINTERPS",
|
|
136
|
+
"QUALITATIVE STATES",
|
|
137
|
+
"SYSTEMS BEHAVIOR",
|
|
138
|
+
"THESES"
|
|
139
|
+
],
|
|
140
|
+
"notes": [],
|
|
141
|
+
"seeAlso": []
|
|
142
|
+
}
|
|
143
|
+
]
|
|
144
|
+
}
|
|
145
|
+
]
|
|
146
|
+
/** END TEST CASES **/
|