citeclaw 2.0.0

package/vendor/translators-official/DEPATISnet.js

@@ -0,0 +1,373 @@
+{
+	"translatorID": "d76fea32-fe20-4c00-b5b9-bea8c688c2b0",
+	"label": "DEPATISnet",
+	"creator": "Klaus Flittner",
+	"target": "^https?://depatisnet\\.dpma\\.de/DepatisNet/depatisnet",
+	"minVersion": "3.0",
+	"maxVersion": "",
+	"priority": 100,
+	"inRepository": true,
+	"translatorType": 4,
+	"browserSupport": "gcsibv",
+	"lastUpdated": "2019-12-07 20:44:27"
+}
+
+/*
+	***** BEGIN LICENSE BLOCK *****
+
+	DEPATISnet translator - Copyright © 2014 Klaus Flittner
+
+	This program is free software: you can redistribute it and/or modify
+	it under the terms of the GNU Affero General Public License as published by
+	the Free Software Foundation, either version 3 of the License, or
+	(at your option) any later version.
+
+	This program is distributed in the hope that it will be useful,
+	but WITHOUT ANY WARRANTY; without even the implied warranty of
+	MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+	GNU Affero General Public License for more details.
+
+	You should have received a copy of the GNU Affero General Public License
+	along with this program.  If not, see <http://www.gnu.org/licenses/>.
+
+	***** END LICENSE BLOCK *****
+*/
+
+function detectWeb(doc, url) {
+	if (url.includes("action=bibdat")) {
+		return "patent";
+	}
+	if (url.includes("action=treffer") && Object.keys(getSearchResults(doc)).length) {
+		return "multiple";
+	}
+	return false;
+}
+
+function getSearchResults(doc) {
+	var results = {};
+	
+	var rows = ZU.xpath(doc, '//div[@id="inhalt"]/form/table/tbody/tr');
+	
+	for (var i = 0, n = rows.length; i < n; i++) {
+		var columns = ZU.xpath(rows[i], './td');
+		
+		var href = ZU.xpath(columns[0], './a')[0].href;
+		var name = ZU.trimInternal(columns[0].textContent);
+		name = name + " \"" + cleanTitle(columns[1]) + "\"";
+		
+		results[href] = name;
+	}
+	return results;
+}
+
+
+var labelMap = {
+	AN: "applicationNumber",
+	AB: "abstractNote",
+};
+
+function cleanTitle(value) {
+	var titles = value.textContent.split(/\[[A-Z]{2}\]/);
+
+	if (titles.length < 2) {
+		return "";
+	}
+	var title = ZU.trimInternal(titles[1]);
+	if (title == title.toUpperCase()) {
+		title = ZU.capitalizeTitle(title, true);
+	}
+	return title;
+}
+
+function cleanName(name, inventors) {
+	name = ZU.trimInternal(name);
+	if (name == "") return "";
+	
+	var parts = name.split(",");
+
+	parts = parts.map(
+		function (part) {
+			part = ZU.trimInternal(part);
+			if (part.toUpperCase() == part) {
+				part = ZU.capitalizeTitle(part, true);
+			}
+			return part;
+		}
+	);
+
+	// Last is always country code, so only return first part if there are only two
+	// if second part starts with a number it is a postal code and first part is
+	// either a company name or a name without delimiter between last and given name
+	if (parts.length <= 2 || parts[1].match(/^[0-9]/)) {
+		if (inventors) {
+			name = parts[0].split(/ /);
+			return name.shift() + ", " + name.join(" ");
+		}
+		else {
+			return parts[0];
+		}
+	}
+	else {
+		return parts[0] + ", " + parts[1];
+	}
+}
+
+function scrape(doc, url) {
+	var newItem = new Zotero.Item("patent");
+
+	var ipcs = [];
+
+	var rows = ZU.xpath(doc, '//table[@class="tab_detail"]/tbody/tr');
+	
+	for (var i = 0, n = rows.length; i < n; i++) {
+		var columns = ZU.xpath(rows[i], './td');
+
+		var label;
+		var value;
+		if (columns.length == 4) {
+			label = columns[2].textContent;
+			value = columns[3];
+		}
+		else if (columns.length == 3) {
+			label = columns[1].textContent;
+			value = columns[2];
+		}
+		if (!value) continue;
+		
+		// Z.debug("label: " + label);
+		// Z.debug("value: " + value.textContent);
+		
+		switch (label) {
+			case "TI":
+				newItem.title = cleanTitle(value);
+				break;
+			case "IN":
+				newItem.creators = [];
+				var creators = value.textContent.split(";");
+				for (let creator of creators) {
+					creator = cleanName(creator, true);
+					if (creator != "") {
+						newItem.creators.push(ZU.cleanAuthor(creator, "inventor", true));
+					}
+				}
+				break;
+			case "PA":
+				var assigneeNames = value.textContent.split(";").map(name => cleanName(name, false)).filter(name => name != "");
+				newItem.assignee = assigneeNames.join("; ");
+				break;
+			case "ICM":
+			case "ICS":
+				var ipc = ZU.xpathText(value, './a').split(",");
+				for (let name of ipc) {
+					ipcs.push(ZU.trimInternal(name));
+				}
+				break;
+			case "PUB":
+				var date = value.textContent.replace(/\s+/g, '').split(".");
+				newItem.date = date[2] + "-" + date[1] + "-" + date[0];
+				break;
+			case "AD":
+				var filingDate = value.textContent.replace(/\s+/g, '').split(".");
+				newItem.filingDate = filingDate[2] + "-" + filingDate[1] + "-" + filingDate[0];
+				break;
+			default:
+				if (labelMap[label]) {
+					newItem[labelMap[label]] = ZU.trimInternal(value.textContent);
+				}
+		}
+	}
+
+	var pn = url.match(/\bdocid=([^&#]*)/)[1];
+	
+	newItem.url = "http://depatisnet.dpma.de/DepatisNet/depatisnet?action=bibdat&docid=" + pn;
+	
+	newItem.patentNumber = pn.replace(/^([A-Z]{2})[0]*(.*)$/, "$1$2");
+
+	// some entries (especially JP and RU patents) have no titles listed in DepatisNet
+	// use the patentnumber instead for these entries
+	if (!newItem.title) {
+		newItem.title = newItem.patentNumber;
+	}
+
+	newItem.extra = "IPC: " + ipcs.join("; ");
+
+	newItem.attachments.push({
+		title: "DEPATISnet patent record",
+		url: url,
+		snapshot: false
+	});
+	
+	var pages = ZU.xpathText(doc, '//div[@id="inhalt"]/h2');
+	// e.g. "Dokument   DE000004446098C2   (Seiten: 8)"
+	// but there is no PDF available when we have "Seiten: 0"
+	if (pages && /(Seiten|Pages):\s*[1-9][0-9]*/.test(pages)) {
+		var pdfurl = "https://depatisnet.dpma.de/DepatisNet/depatisnet/" + pn + "_all_pages.pdf?window=1&space=menu&content=download_doc_verify&action=download_doc&docid=" + pn;
+		newItem.attachments.push({
+			title: "Fulltext",
+			url: pdfurl,
+			mimeType: "application/pdf"
+		});
+	}
+
+	newItem.complete();
+}
+
+function doWeb(doc, url) {
+	if (detectWeb(doc, url) == "multiple") {
+		var results = getSearchResults(doc);
+
+		Z.selectItems(results,
+			function (items) {
+				if (!items) return;
+
+				var urls = [];
+				for (var j in items) {
+					urls.push(j);
+				}
+				ZU.processDocuments(urls, scrape);
+			}
+		);
+	}
+	else {
+		scrape(doc, url);
+	}
+}
+
+/** BEGIN TEST CASES **/
+var testCases = [
+	{
+		"type": "web",
+		"url": "https://depatisnet.dpma.de/DepatisNet/depatisnet?action=bibdat&docid=DE000004446098C2",
+		"items": [
+			{
+				"itemType": "patent",
+				"title": "Elektrischer Verbinder mit Abschirmung",
+				"creators": [
+					{
+						"firstName": "Jacques",
+						"lastName": "Longueville",
+						"creatorType": "inventor"
+					},
+					{
+						"firstName": "Gerhard",
+						"lastName": "Meyer",
+						"creatorType": "inventor"
+					}
+				],
+				"issueDate": "1998-11-26",
+				"applicationNumber": "4446098",
+				"assignee": "Philips Patentverwaltung GmbH; Siemens AG",
+				"extra": "IPC: H01R 23/68; H01R 4/24; H01R 13/648; H01R 13/652",
+				"filingDate": "1994-12-22",
+				"patentNumber": "DE4446098C2",
+				"url": "http://depatisnet.dpma.de/DepatisNet/depatisnet?action=bibdat&docid=DE000004446098C2",
+				"attachments": [
+					{
+						"title": "DEPATISnet patent record"
+					},
+					{
+						"title": "Fulltext",
+						"mimeType": "application/pdf"
+					}
+				],
+				"tags": [],
+				"notes": [],
+				"seeAlso": []
+			}
+		]
+	},
+	{
+		"type": "web",
+		"url": "https://depatisnet.dpma.de/DepatisNet/depatisnet?action=bibdat&docid=EP000000871998A1",
+		"items": [
+			{
+				"itemType": "patent",
+				"title": "Elektrischer Verbinder Mit Abschirmung",
+				"creators": [
+					{
+						"firstName": "Jacques",
+						"lastName": "Longueville",
+						"creatorType": "inventor"
+					},
+					{
+						"firstName": "Gerhard",
+						"lastName": "Meyer",
+						"creatorType": "inventor"
+					}
+				],
+				"issueDate": "1998-10-21",
+				"applicationNumber": "95942705",
+				"assignee": "Koninkl Philips Electronics Nv; Philips Patentverwaltung; Siemens Ag",
+				"extra": "IPC: H01R 12/16;",
+				"filingDate": "1995-12-20",
+				"patentNumber": "EP871998A1",
+				"url": "http://depatisnet.dpma.de/DepatisNet/depatisnet?action=bibdat&docid=EP000000871998A1",
+				"attachments": [
+					{
+						"title": "DEPATISnet patent record"
+					},
+					{
+						"title": "Fulltext",
+						"mimeType": "application/pdf"
+					}
+				],
+				"tags": [],
+				"notes": [],
+				"seeAlso": []
+			}
+		]
+	},
+	{
+		"type": "web",
+		"url": "https://depatisnet.dpma.de/DepatisNet/depatisnet?action=bibdat&docid=AR000000047789A1",
+		"items": [
+			{
+				"itemType": "patent",
+				"title": "Sistema De Inyeccion De Odorizante En El Gas Natural",
+				"creators": [],
+				"issueDate": "2006-02-22",
+				"abstractNote": "[XX] Un sistema de inyeccion de odorizante en el gas natural, para inyectar odorizante en un conducto de gas natural, que incluye un conducto de derivacion, un tanque de odorizante, un medidor de caudal, una válvula de control y un controlador acoplado para comunicarse con el medidor de caudal y con la válvula de control. El conducto de derivacion incluye una entrada que está en comunicacion fluida con una seccion corriente abajo del conducto de gas, y una salida que está en comunicacion fluida con una seccion corriente abajo del conducto de gas. El tanque de odorizante, la válvula de control y el medidor de caudal están dispuestos en el conducto de derivacion. El medidor de caudal detecta una característica de una corriente de fluido que lo atraviesa y genera una senal de flujo de fluido correspondiente. El controlador está programado para operar la válvula de control en base a la senal de flujo de fluido recibida del medidor de caudal.",
+				"applicationNumber": "P 050100188",
+				"assignee": "Fisher Controls Int",
+				"extra": "IPC: F17D 5/02; F17D 1/04; F17D 3/12; G01M 3/28; F17D 5/00",
+				"filingDate": "2005-01-19",
+				"patentNumber": "AR47789A1",
+				"url": "http://depatisnet.dpma.de/DepatisNet/depatisnet?action=bibdat&docid=AR000000047789A1",
+				"attachments": [
+					{
+						"title": "DEPATISnet patent record"
+					}
+				],
+				"tags": [],
+				"notes": [],
+				"seeAlso": []
+			}
+		]
+	},
+	{
+		"type": "web",
+		"url": "https://depatisnet.dpma.de/DepatisNet/depatisnet?action=bibdat&docid=JP002007522283A",
+		"items": [
+			{
+				"itemType": "patent",
+				"title": "JP2007522283A",
+				"creators": [],
+				"issueDate": "2007-08-09",
+				"applicationNumber": "2006551227",
+				"extra": "IPC: C10L 3/10;",
+				"filingDate": "2005-01-18",
+				"patentNumber": "JP2007522283A",
+				"url": "http://depatisnet.dpma.de/DepatisNet/depatisnet?action=bibdat&docid=JP002007522283A",
+				"attachments": [
+					{
+						"title": "DEPATISnet patent record"
+					}
+				],
+				"tags": [],
+				"notes": [],
+				"seeAlso": []
+			}
+		]
+	}
+]
+/** END TEST CASES **/

package/vendor/translators-official/DOAJ.js

@@ -0,0 +1,243 @@
+{
+	"translatorID": "53734210-2284-437f-9896-8ad65917c343",
+	"label": "DOAJ",
+	"creator": "Abe Jellinek",
+	"target": "^https?://(www\\.)?doaj\\.org/(article|search)/",
+	"minVersion": "3.0",
+	"maxVersion": "",
+	"priority": 100,
+	"inRepository": true,
+	"translatorType": 4,
+	"browserSupport": "gcsibv",
+	"lastUpdated": "2025-08-08 16:00:53"
+}
+
+/*
+	***** BEGIN LICENSE BLOCK *****
+
+	Copyright © 2021 Abe Jellinek
+	
+	This file is part of Zotero.
+
+	Zotero is free software: you can redistribute it and/or modify
+	it under the terms of the GNU Affero General Public License as published by
+	the Free Software Foundation, either version 3 of the License, or
+	(at your option) any later version.
+
+	Zotero is distributed in the hope that it will be useful,
+	but WITHOUT ANY WARRANTY; without even the implied warranty of
+	MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+	GNU Affero General Public License for more details.
+
+	You should have received a copy of the GNU Affero General Public License
+	along with Zotero. If not, see <http://www.gnu.org/licenses/>.
+
+	***** END LICENSE BLOCK *****
+*/
+
+
+function detectWeb(doc, _url) {
+	if (doc.querySelector('meta[name="citation_title"]')) {
+		return "journalArticle";
+	}
+	else if (getSearchResults(doc, true)) {
+		return "multiple";
+	}
+	return false;
+}
+
+function getSearchResults(doc, checkOnly) {
+	var items = {};
+	var found = false;
+	var rows = doc.querySelectorAll('h3 > a[href*="/article/"]');
+	for (let row of rows) {
+		let href = row.href;
+		let title = ZU.trimInternal(row.textContent);
+		if (!href || !title) continue;
+		if (checkOnly) return true;
+		found = true;
+		items[href] = title;
+	}
+	return found ? items : false;
+}
+
+function doWeb(doc, url) {
+	if (detectWeb(doc, url) == "multiple") {
+		Zotero.selectItems(getSearchResults(doc, false), function (items) {
+			if (items) ZU.processDocuments(Object.keys(items), scrape);
+		});
+	}
+	else {
+		scrape(doc, url);
+	}
+}
+
+function scrape(doc, url) {
+	var translator = Zotero.loadTranslator('web');
+	// Embedded Metadata
+	translator.setTranslator('951c027d-74ac-47d4-a107-9c3069ab7b48');
+	translator.setDocument(doc);
+	
+	translator.setHandler('itemDone', function (obj, item) {
+		item.abstractNote = text(doc, '.article-details__abstract');
+		item.attachments = [];
+		
+		for (let button of doc.querySelectorAll('.button')) {
+			if (button.textContent.toLowerCase().includes('read online')) {
+				item.url = button.href;
+				break;
+			}
+		}
+		
+		item.complete();
+	});
+
+	translator.getTranslatorObject(function (trans) {
+		trans.doWeb(doc, url);
+	});
+}
+
+/** BEGIN TEST CASES **/
+var testCases = [
+	{
+		"type": "web",
+		"url": "https://doaj.org/article/0006d8f8ca3e4af1b3ec14a07e88bb12",
+		"items": [
+			{
+				"itemType": "journalArticle",
+				"title": "MiRNA Profiles in Lymphoblastoid Cell Lines of Finnish Prostate Cancer Families.",
+				"creators": [
+					{
+						"firstName": "Daniel",
+						"lastName": "Fischer",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Tiina",
+						"lastName": "Wahlfors",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Henna",
+						"lastName": "Mattila",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Hannu",
+						"lastName": "Oja",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Teuvo L. J.",
+						"lastName": "Tammela",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Johanna",
+						"lastName": "Schleutker",
+						"creatorType": "author"
+					}
+				],
+				"date": "2015/01/01",
+				"DOI": "10.1371/journal.pone.0127427",
+				"ISSN": "1932-6203",
+				"abstractNote": "BACKGROUND:Heritable factors are evidently involved in prostate cancer (PrCa) carcinogenesis, but currently, genetic markers are not routinely used in screening or diagnostics of the disease. More precise information is needed for making treatment decisions to distinguish aggressive cases from indolent disease, for which heritable factors could be a useful tool. The genetic makeup of PrCa has only recently begun to be unravelled through large-scale genome-wide association studies (GWAS). The thus far identified Single Nucleotide Polymorphisms (SNPs) explain, however, only a fraction of familial clustering. Moreover, the known risk SNPs are not associated with the clinical outcome of the disease, such as aggressive or metastasised disease, and therefore cannot be used to predict the prognosis. Annotating the SNPs with deep clinical data together with miRNA expression profiles can improve the understanding of the underlying mechanisms of different phenotypes of prostate cancer. RESULTS:In this study microRNA (miRNA) profiles were studied as potential biomarkers to predict the disease outcome. The study subjects were from Finnish high risk prostate cancer families. To identify potential biomarkers we combined a novel non-parametrical test with an importance measure provided from a Random Forest classifier. This combination delivered a set of nine miRNAs that was able to separate cases from controls. The detected miRNA expression profiles could predict the development of the disease years before the actual PrCa diagnosis or detect the existence of other cancers in the studied individuals. Furthermore, using an expression Quantitative Trait Loci (eQTL) analysis, regulatory SNPs for miRNA miR-483-3p that were also directly associated with PrCa were found. CONCLUSION:Based on our findings, we suggest that blood-based miRNA expression profiling can be used in the diagnosis and maybe even prognosis of the disease. In the future, miRNA profiling could possibly be used in targeted screening, together with Prostate Specific Antigene (PSA) testing, to identify men with an elevated PrCa risk.",
+				"issue": "5",
+				"language": "en",
+				"libraryCatalog": "doaj.org",
+				"pages": "e0127427",
+				"publicationTitle": "PLoS ONE",
+				"url": "https://doi.org/10.1371/journal.pone.0127427",
+				"volume": "10",
+				"attachments": [],
+				"tags": [],
+				"notes": [],
+				"seeAlso": []
+			}
+		]
+	},
+	{
+		"type": "web",
+		"url": "https://doaj.org/article/f36918ccae3243548729f113f8920ba2",
+		"items": [
+			{
+				"itemType": "journalArticle",
+				"title": "Making every drop count: reducing wastage of a novel blood component for transfusion of trauma patients",
+				"creators": [
+					{
+						"firstName": "Nathan",
+						"lastName": "Proudlove",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Laura",
+						"lastName": "Green",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Harriet",
+						"lastName": "Tucker",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Anne",
+						"lastName": "Weaver",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Ross",
+						"lastName": "Davenport",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Jane",
+						"lastName": "Davies",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Josephine",
+						"lastName": "McCullagh",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Dave",
+						"lastName": "Edmondson",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Julia",
+						"lastName": "Lancut",
+						"creatorType": "author"
+					},
+					{
+						"firstName": "Angela",
+						"lastName": "Maddison",
+						"creatorType": "author"
+					}
+				],
+				"date": "2021/09/01",
+				"DOI": "10.1136/bmjoq-2021-001396",
+				"ISSN": "2399-6641",
+				"abstractNote": "Recent research demonstrates that transfusing whole blood (WB=red blood cells (RBC)+plasma+platelets) rather than just RBC (which is current National Health Service (NHS) practice) may improve outcomes for major trauma patients. As part of a programme to investigate provision of WB, NHS Blood and Transplant undertook a 2-year feasibility study to supply the Royal London Hospital (RLH) with (group O negative, ‘O neg’) leucodepleted red cell and plasma (LD-RCP) for transfusion of trauma patients with major haemorrhage in prehospital settings.Incidents requiring such prehospital transfusion occur randomly, with very high variation. Availability is critical, but O neg LD-RCP is a scarce resource and has a limited shelf life (14 days) after which it must be disposed of. The consequences of wastage are the opportunity cost of loss of overall treatment capacity across the NHS and reputational damage.The context was this feasibility study, set up to assess deliverability to RLH and subsequent wastage levels. Within this, we conducted a quality improvement project, which aimed to reduce the wastage of LD-RCP to no more than 8% (ie, 1 of the 12 units delivered per week).Over this 2-year period, we reduced wastage from a weekly average of 70%–27%. This was achieved over four improvement cycles. The largest improvement came from moving near-expiry LD-RCP to the emergency department (ED) for use with their trauma patients, with subsequent improvements from embedding use in ED as routine practice, introducing a dedicated LD-RCP delivery schedule (which increased the units ≤2 days old at delivery from 42% to 83%) and aligning this delivery schedule to cover two cycles of peak demand (Fridays and Saturdays).",
+				"issue": "3",
+				"language": "en",
+				"libraryCatalog": "doaj.org",
+				"publicationTitle": "BMJ Open Quality",
+				"shortTitle": "Making every drop count",
+				"url": "https://bmjopenquality.bmj.com/content/10/3/e001396.full",
+				"volume": "10",
+				"attachments": [],
+				"tags": [],
+				"notes": [],
+				"seeAlso": []
+			}
+		]
+	},
+	{
+		"type": "web",
+		"url": "https://doaj.org/search/articles?source=%7B%22query%22%3A%7B%22query_string%22%3A%7B%22query%22%3A%22test%22%2C%22default_operator%22%3A%22AND%22%7D%7D%2C%22size%22%3A50%2C%22sort%22%3A%5B%7B%22created_date%22%3A%7B%22order%22%3A%22desc%22%7D%7D%5D%7D",
+		"defer": true,
+		"items": "multiple"
+	}
+]
+/** END TEST CASES **/