circle-ir-ai 2.7.1 → 2.7.2

package/dist/cli/commands/cluster.js

@@ -1,203 +0,0 @@
-/**
- * Cluster Command
- *
- * Wires existing src/components/ analyzeComponents() to CLI.
- * Performs two-phase component enrichment and clustering.
- *
- * Usage:
- *   cognium-ai cluster <path> [--format json] [--llm]
- */
-import * as fs from 'fs';
-import * as path from 'path';
-import { isAnalyzerInitialized, analyze } from 'circle-ir';
-import { ensureAnalyzerInitialized } from '../../utils/analyzer-init.js';
-import { analyzeComponents } from '../../components/index.js';
-import { collectFiles as collectSourceFiles } from '../file-collection.js';
-import { getEffectiveOptions } from '../effective-options.js';
-// ---------------------------------------------------------------------------
-// Extract components from CircleIR
-// ---------------------------------------------------------------------------
-function inferComponentType(type) {
-    const name = type.name.toLowerCase();
-    const annos = type.annotations.map(a => a.toLowerCase());
-    if (annos.some(a => a.includes('controller') || a.includes('restcontroller')))
-        return 'controller';
-    if (annos.some(a => a.includes('service')))
-        return 'service';
-    if (annos.some(a => a.includes('repository')))
-        return 'repository';
-    if (name.endsWith('controller') || name.endsWith('handler'))
-        return 'controller';
-    if (name.endsWith('service') || name.endsWith('manager'))
-        return 'service';
-    if (name.endsWith('repository') || name.endsWith('dao'))
-        return 'repository';
-    if (name.endsWith('model') || name.endsWith('entity') || name.endsWith('dto'))
-        return 'model';
-    return 'utility';
-}
-function extractComponents(filePath, ir) {
-    const components = [];
-    for (const type of ir.types) {
-        const methods = type.methods.map(m => m.name);
-        components.push({
-            id: `${path.basename(filePath)}:${type.name}`,
-            name: type.name,
-            file: filePath,
-            type: inferComponentType(type),
-            line_start: type.start_line,
-            line_end: type.end_line,
-            methods,
-            annotations: type.annotations,
-        });
-    }
-    return components;
-}
-// ---------------------------------------------------------------------------
-// Text formatting
-// ---------------------------------------------------------------------------
-function formatTextReport(result) {
-    const lines = [];
-    lines.push('===============================================================');
-    lines.push('                    COMPONENT CLUSTER REPORT');
-    lines.push('===============================================================');
-    lines.push('');
-    // Components
-    lines.push(`Components: ${result.components.length}`);
-    lines.push('');
-    for (const comp of result.components) {
-        const role = comp.semantic?.architectural_role ?? 'unknown';
-        const purpose = comp.semantic?.business_purpose ?? '';
-        lines.push(`  ${comp.name} [${role}]`);
-        if (purpose)
-            lines.push(`    Purpose: ${purpose}`);
-    }
-    lines.push('');
-    // Clusters
-    if (result.clustering) {
-        lines.push('---------------------------------------------------------------');
-        lines.push(`Feature Clusters: ${result.clustering.features.length}`);
-        lines.push('---------------------------------------------------------------');
-        for (const feature of result.clustering.features) {
-            lines.push(`  ${feature.name} (${feature.components.length} components)`);
-            for (const comp of feature.components) {
-                lines.push(`    - ${comp}`);
-            }
-        }
-        lines.push('');
-        if (result.clustering.flows.length > 0) {
-            lines.push(`Flows: ${result.clustering.flows.length}`);
-            for (const flow of result.clustering.flows) {
-                lines.push(`  ${flow.name} [${flow.type}] — ${flow.components_involved.length} components`);
-            }
-            lines.push('');
-        }
-        if (result.clustering.architecture) {
-            lines.push('Architecture Insights:');
-            lines.push(`  Pattern: ${result.clustering.architecture.pattern}`);
-            if (result.clustering.architecture.design_patterns?.length) {
-                lines.push(`  Design Patterns: ${result.clustering.architecture.design_patterns.join(', ')}`);
-            }
-            const { strengths, weaknesses, recommendations } = result.clustering.architecture.insights;
-            if (strengths?.length)
-                lines.push(`  Strengths: ${strengths.join(', ')}`);
-            if (weaknesses?.length)
-                lines.push(`  Weaknesses: ${weaknesses.join(', ')}`);
-            if (recommendations?.length)
-                lines.push(`  Recommendations: ${recommendations.join(', ')}`);
-        }
-    }
-    lines.push('');
-    lines.push('===============================================================');
-    return lines.join('\n');
-}
-// ---------------------------------------------------------------------------
-// Main command
-// ---------------------------------------------------------------------------
-export async function executeCluster(args) {
-    const targetPath = args.directory || args.file || process.cwd();
-    if (!fs.existsSync(targetPath)) {
-        console.error(`Error: Path not found: ${targetPath}`);
-        return 1;
-    }
-    if (!fs.statSync(targetPath).isDirectory()) {
-        console.error('Error: cluster command requires a directory path');
-        return 1;
-    }
-    if (!args.quiet) {
-        console.error(`Running component clustering on ${targetPath}...`);
-    }
-    try {
-        // Initialize analyzer
-        if (!isAnalyzerInitialized()) {
-            if (!args.quiet)
-                console.error('  Initializing analyzer...');
-            await ensureAnalyzerInitialized();
-        }
-        // Collect and analyze files (respects --include/--exclude and config)
-        const eff = getEffectiveOptions(args, targetPath);
-        const files = collectSourceFiles(targetPath, {
-            include: eff.include,
-            exclude: eff.exclude,
-            maxFiles: args.maxFiles ?? 500,
-        });
-        if (!args.quiet) {
-            console.error(`  Found ${files.length} source file(s)`);
-        }
-        const allComponents = [];
-        for (const file of files) {
-            try {
-                const content = fs.readFileSync(file.path, 'utf-8');
-                const ir = await analyze(content, path.basename(file.path), file.language);
-                allComponents.push(...extractComponents(file.path, ir));
-            }
-            catch {
-                // Skip files that fail analysis
-            }
-        }
-        if (!args.quiet) {
-            console.error(`  Extracted ${allComponents.length} components`);
-        }
-        // Run component analysis. The richer feature-clustering and
-        // architecture-pattern detection (Phase 1/2) needs LLM; without LLM we
-        // only get the static component list.
-        const enableLLM = !args.noLlm && (args.llmEnrich || args.llmVerify);
-        if (!enableLLM && !args.quiet) {
-            console.error('  Note: --no-llm — feature clustering and architecture analysis are skipped.');
-            console.error('        Re-run without --no-llm for richer output.');
-        }
-        const result = await analyzeComponents(allComponents, {
-            enablePhase1: enableLLM,
-            enablePhase2: enableLLM,
-        });
-        // Output
-        if (args.format === 'json') {
-            const output = JSON.stringify(result, null, 2);
-            if (args.output) {
-                fs.writeFileSync(args.output, output);
-                if (!args.quiet)
-                    console.error(`Output written to ${args.output}`);
-            }
-            else {
-                console.log(output);
-            }
-        }
-        else {
-            const report = formatTextReport(result);
-            if (args.output) {
-                fs.writeFileSync(args.output, report);
-                if (!args.quiet)
-                    console.error(`Output written to ${args.output}`);
-            }
-            else {
-                console.log(report);
-            }
-        }
-        return 0;
-    }
-    catch (error) {
-        console.error('Error:', error instanceof Error ? error.message : error);
-        return 1;
-    }
-}
-//# sourceMappingURL=cluster.js.map

package/dist/cli/commands/cluster.js.map

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package/dist/cli/commands/compare.d.ts

@@ -1,13 +0,0 @@
-/**
- * Trust Score Comparison Command
- *
- * Compares trust scores of two paths (A = baseline, B = current).
- *
- * Usage:
- *   cognium-ai compare <pathA> <pathB>
- *   cognium-ai compare <pathA> <pathB> --format json
- *   cognium-ai compare <pathA> <pathB> -o comparison.json
- */
-import type { CliArgs } from '../args.js';
-export declare function executeCompare(args: CliArgs): Promise<number>;
-//# sourceMappingURL=compare.d.ts.map

package/dist/cli/commands/compare.d.ts.map

@@ -1 +0,0 @@
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package/dist/cli/commands/compare.js

@@ -1,109 +0,0 @@
-/**
- * Trust Score Comparison Command
- *
- * Compares trust scores of two paths (A = baseline, B = current).
- *
- * Usage:
- *   cognium-ai compare <pathA> <pathB>
- *   cognium-ai compare <pathA> <pathB> --format json
- *   cognium-ai compare <pathA> <pathB> -o comparison.json
- */
-import * as fs from 'fs';
-import { runTrustAnalysis } from './trust.js';
-import { getEffectiveOptions } from '../effective-options.js';
-import { compareTrustResults, formatComparisonReport, } from '../../trust/compare.js';
-// ---------------------------------------------------------------------------
-// Main command
-// ---------------------------------------------------------------------------
-export async function executeCompare(args) {
-    // Both paths must be set explicitly on CliArgs. The Commander program
-    // (cli/program.ts) populates them from `<pathA> <pathB>` positional args.
-    // Programmatic consumers must set both `args.directory` and `args.pathB`.
-    if (!args.directory || !args.pathB) {
-        console.error('Error: compare requires two paths');
-        console.error('Usage: cognium-ai compare <pathA> <pathB>');
-        return 1;
-    }
-    const pathA = args.directory;
-    const pathB = args.pathB;
-    // Validate both paths exist
-    if (!fs.existsSync(pathA)) {
-        console.error(`Error: Path A not found: ${pathA}`);
-        return 1;
-    }
-    if (!fs.existsSync(pathB)) {
-        console.error(`Error: Path B not found: ${pathB}`);
-        return 1;
-    }
-    if (!args.quiet) {
-        console.error(`Comparing trust scores:`);
-        console.error(`  A (baseline): ${pathA}`);
-        console.error(`  B (current):  ${pathB}`);
-        console.error('');
-    }
-    try {
-        // Effective options (cognium.config.json + .circle-ir.yaml + CLI) — apply
-        // to both sides so the comparison is symmetric.
-        const effA = getEffectiveOptions(args, pathA);
-        const effB = getEffectiveOptions({ ...args, config: args.config }, pathB);
-        // Run trust analysis on path A
-        if (!args.quiet) {
-            console.error('--- Analyzing path A ---');
-        }
-        const resultA = await runTrustAnalysis(pathA, true, effA.analyzerOptions, effA.trustDisabledPasses, effA.include, effA.exclude, args.maxFiles ?? 1000);
-        // Run trust analysis on path B
-        if (!args.quiet) {
-            console.error('--- Analyzing path B ---');
-        }
-        const resultB = await runTrustAnalysis(pathB, true, effB.analyzerOptions, effB.trustDisabledPasses, effB.include, effB.exclude, args.maxFiles ?? 1000);
-        // Compare
-        const comparison = compareTrustResults(resultA.trustResult, resultB.trustResult);
-        // Output
-        if (args.format === 'json') {
-            const jsonOutput = JSON.stringify({
-                scoreDelta: comparison.scoreDelta,
-                tierA: comparison.tierA,
-                tierB: comparison.tierB,
-                tierChanged: comparison.tierChanged,
-                trend: comparison.trend,
-                scoreA: comparison.resultA.score,
-                scoreB: comparison.resultB.score,
-                passDeltas: comparison.passDeltas,
-                newFindingsCount: comparison.newFindings.length,
-                fixedFindingsCount: comparison.fixedFindings.length,
-                newFindings: comparison.newFindings,
-                fixedFindings: comparison.fixedFindings,
-                timestamp: new Date().toISOString(),
-            }, null, 2);
-            if (args.output) {
-                fs.writeFileSync(args.output, jsonOutput);
-                if (!args.quiet) {
-                    console.error(`Output written to ${args.output}`);
-                }
-            }
-            else {
-                console.log(jsonOutput);
-            }
-        }
-        else {
-            // Text report (default)
-            const report = formatComparisonReport(comparison);
-            if (args.output) {
-                fs.writeFileSync(args.output, report);
-                if (!args.quiet) {
-                    console.error(`Output written to ${args.output}`);
-                }
-            }
-            else {
-                console.log(report);
-            }
-        }
-        // Exit code: 0 if stable/improved, 1 if degraded
-        return comparison.trend === 'degraded' ? 1 : 0;
-    }
-    catch (error) {
-        console.error('Error:', error instanceof Error ? error.message : error);
-        return 1;
-    }
-}
-//# sourceMappingURL=compare.js.map

package/dist/cli/commands/compare.js.map

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package/dist/cli/commands/dead-code.d.ts

@@ -1,11 +0,0 @@
-/**
- * Dead Code Detection Command
- *
- * Detects unreachable code via call graph analysis.
- */
-import type { CliArgs } from '../args.js';
-/**
- * Execute dead code detection command.
- */
-export declare function executeDeadCode(args: CliArgs): Promise<number>;
-//# sourceMappingURL=dead-code.d.ts.map

package/dist/cli/commands/dead-code.d.ts.map

@@ -1 +0,0 @@
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package/dist/cli/commands/dead-code.js

@@ -1,75 +0,0 @@
-/**
- * Dead Code Detection Command
- *
- * Detects unreachable code via call graph analysis.
- */
-import * as fs from 'fs';
-import { detectDeadCode, formatDeadCodeReport, } from '../../dead-code/index.js';
-import { getEffectiveOptions } from '../effective-options.js';
-/**
- * Execute dead code detection command.
- */
-export async function executeDeadCode(args) {
-    const targetPath = args.directory || process.cwd();
-    if (!fs.existsSync(targetPath)) {
-        console.error(`Error: Path not found: ${targetPath}`);
-        return 1;
-    }
-    if (!args.quiet) {
-        console.error(`Detecting dead code in ${targetPath}...`);
-    }
-    const eff = getEffectiveOptions(args, targetPath);
-    const options = {
-        target: targetPath,
-        includePatterns: eff.include.length > 0 ? eff.include : undefined,
-        excludePatterns: eff.exclude.length > 0 ? eff.exclude : undefined,
-        includeTests: args.includeTests,
-        publicMethodsAsEntryPoints: args.publicAsEntry,
-        onProgress: args.quiet ? undefined : (progress) => {
-            console.error(`[${progress.phase}] ${progress.message || ''}`);
-        },
-    };
-    try {
-        const result = await detectDeadCode(options);
-        // Output results
-        if (args.format === 'json') {
-            const output = JSON.stringify(result, null, 2);
-            if (args.output) {
-                fs.writeFileSync(args.output, output);
-                if (!args.quiet) {
-                    console.error(`Output written to ${args.output}`);
-                }
-            }
-            else {
-                console.log(output);
-            }
-        }
-        else {
-            // Summary format — honor --full / --top <n> for truncation
-            const report = formatDeadCodeReport(result, {
-                full: args.full,
-                topPerFile: args.top ?? undefined,
-                topEntryPoints: args.top ?? undefined,
-            });
-            if (args.output) {
-                fs.writeFileSync(args.output, report);
-                if (!args.quiet) {
-                    console.error(`Output written to ${args.output}`);
-                }
-            }
-            else {
-                console.log(report);
-            }
-        }
-        // Exit with error code if dead code found
-        if (args.exitCode && result.deadCode.length > 0) {
-            return 1;
-        }
-        return 0;
-    }
-    catch (error) {
-        console.error('Error:', error instanceof Error ? error.message : error);
-        return 1;
-    }
-}
-//# sourceMappingURL=dead-code.js.map

package/dist/cli/commands/dead-code.js.map

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package/dist/cli/commands/generate-spec.d.ts

@@ -1,11 +0,0 @@
-/**
- * Specifica Generation Command
- *
- * Generate Specifica-format specifications from existing code.
- */
-import type { CliArgs } from '../args.js';
-/**
- * Execute Specifica generation command.
- */
-export declare function executeGenerateSpec(args: CliArgs): Promise<number>;
-//# sourceMappingURL=generate-spec.d.ts.map

package/dist/cli/commands/generate-spec.d.ts.map

@@ -1 +0,0 @@
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package/dist/cli/commands/generate-spec.js

@@ -1,120 +0,0 @@
-/**
- * Specifica Generation Command
- *
- * Generate Specifica-format specifications from existing code.
- */
-import * as fs from 'fs';
-import { ensureAnalyzerInitialized } from '../../utils/analyzer-init.js';
-import { generateSpecifica, generateSpecificaForDirectory, } from '../../specifica/index.js';
-import { getEffectiveOptions } from '../effective-options.js';
-/**
- * Execute Specifica generation command.
- */
-export async function executeGenerateSpec(args) {
-    const targetPath = args.file || args.directory;
-    if (!targetPath) {
-        console.error('Error: No path specified');
-        console.error('Usage: cognium-ai generate-spec <file|directory> [options]');
-        return 1;
-    }
-    if (!fs.existsSync(targetPath)) {
-        console.error(`Error: Path not found: ${targetPath}`);
-        return 1;
-    }
-    // generate-spec is fundamentally LLM-driven (the engine calls an LLM to
-    // describe components, principles, tasks). Honoring --no-llm here means
-    // doing nothing useful, so reject explicitly rather than producing empty
-    // specs or silently calling the LLM despite the user's flag.
-    if (args.noLlm) {
-        console.error('Error: generate-spec requires LLM configuration; --no-llm is incompatible.');
-        console.error('       Re-run without --no-llm, or unset env vars to clear --no-llm.');
-        return 1;
-    }
-    const isDirectory = fs.statSync(targetPath).isDirectory();
-    if (!args.quiet) {
-        console.error(`Generating Specifica specification for ${targetPath}...`);
-    }
-    const eff = getEffectiveOptions(args, targetPath);
-    const options = {
-        specModel: args.specModel || 'cognium/gpt-oss-120b',
-        overwrite: args.specOverwrite,
-        quiet: args.quiet,
-        // S2 Phase 2-3 options
-        generateDesign: args.specDesign,
-        generatePrinciples: args.specPrinciples,
-        generateTasks: args.specTasks,
-        enableDesignLLM: args.specDesignLLM,
-        enablePrinciplesLLM: args.specPrinciplesLLM,
-        enableTasksLLM: args.specTasksLLM,
-        includePatterns: eff.include.length > 0 ? eff.include : undefined,
-        excludePatterns: eff.exclude.length > 0 ? eff.exclude : undefined,
-        maxFiles: args.maxFiles ?? undefined,
-    };
-    // Initialize WASM analyzer
-    await ensureAnalyzerInitialized();
-    try {
-        if (isDirectory) {
-            const results = await generateSpecificaForDirectory(targetPath, options);
-            if (!args.quiet) {
-                console.error('');
-                console.error(`✓ Generated ${results.length} specification(s)`);
-                for (const result of results) {
-                    console.error(`  - ${result.featureName}: ${result.outputPath}/spec.md`);
-                }
-                // Show additional generated files
-                const extras = [];
-                if (args.specDesign)
-                    extras.push('design.md');
-                if (args.specPrinciples)
-                    extras.push('principles.md');
-                if (args.specTasks)
-                    extras.push('tasks.md');
-                if (extras.length > 0) {
-                    console.error(`  + Project-level: ${extras.join(', ')}`);
-                }
-                console.error('');
-                console.error('Review required: specifications were automatically generated.');
-            }
-            if (args.format === 'json') {
-                const output = JSON.stringify(results, null, 2);
-                if (args.output) {
-                    fs.writeFileSync(args.output, output);
-                    if (!args.quiet)
-                        console.error(`JSON output written to ${args.output}`);
-                }
-                else {
-                    console.log(output);
-                }
-            }
-        }
-        else {
-            const result = await generateSpecifica(targetPath, options);
-            if (!args.quiet) {
-                console.error('');
-                console.error('✓ Specification generated successfully!');
-                console.error('');
-                console.error(`Feature:  ${result.featureName}`);
-                console.error(`Output:   ${result.outputPath}/spec.md`);
-                console.error('');
-                console.error('Review required: This specification was automatically generated.');
-            }
-            if (args.format === 'json') {
-                const output = JSON.stringify(result, null, 2);
-                if (args.output) {
-                    fs.writeFileSync(args.output, output);
-                    if (!args.quiet)
-                        console.error(`JSON output written to ${args.output}`);
-                }
-                else {
-                    console.log(output);
-                }
-            }
-        }
-        return 0;
-    }
-    catch (error) {
-        console.error('Error:', error instanceof Error ? error.message : error);
-        return 1;
-    }
-}
-//# sourceMappingURL=generate-spec.js.map

package/dist/cli/commands/generate-spec.js.map

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package/dist/cli/commands/health.d.ts

@@ -1,11 +0,0 @@
-/**
- * Health Score Command
- *
- * Calculates codebase health score across multiple dimensions.
- */
-import type { CliArgs } from '../args.js';
-/**
- * Execute health score command.
- */
-export declare function executeHealth(args: CliArgs): Promise<number>;
-//# sourceMappingURL=health.d.ts.map

package/dist/cli/commands/health.d.ts.map

@@ -1 +0,0 @@
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