causantic 0.2.0 → 0.3.0

package/dist/ingest/edge-detector.js

@@ -1,220 +1,88 @@
 /**
- * Topic continuity detection for edge creation.
- * Determines whether consecutive chunks should be connected.
- * Reuses lexical classifier from topic continuity experiments.
+ * Causal transition detection for edge creation.
+ *
+ * Creates sequential linked-list edges between consecutive chunks:
+ * - Inter-turn: last chunk of turn A → first chunk of turn B
+ * - Intra-turn: C1 → C2 → C3 when a turn splits into multiple chunks
+ *
+ * The causal graph is a linked list with branch points at sub-agent forks.
  */
-import { hasTopicShiftMarker, computeKeywordOverlap, extractFilePaths, extractKeywords, } from '../core/lexical-features.js';
+import { hasTopicShiftMarker } from '../core/lexical-features.js';
 /**
  * Default threshold for time gap (30 minutes) that indicates new topic.
  */
 const DEFAULT_TIME_GAP_THRESHOLD_MS = 30 * 60 * 1000;
 /**
- * Detect transitions/edges between consecutive chunks.
- * Returns transitions that should become edges (continuations).
- * Skips transitions that appear to be topic shifts.
+ * Detect causal transitions between chunks using sequential linking.
+ *
+ * Groups chunks by turn index, then:
+ * 1. Intra-turn: sequential edges within a turn (C1→C2→C3)
+ * 2. Inter-turn: edge from last chunk of turn A to first chunk of turn B
+ *    (gated by topic shift detection)
+ *
+ * @param chunks - Array of chunks with metadata.turnIndices
+ * @param options - Detection options (time gap threshold)
+ * @returns Array of causal transitions
  */
-export function detectTransitions(chunks, options = {}) {
+export function detectCausalTransitions(chunks, options = {}) {
     const { timeGapThresholdMs = DEFAULT_TIME_GAP_THRESHOLD_MS } = options;
-    const results = [];
-    for (let i = 1; i < chunks.length; i++) {
-        const prev = chunks[i - 1];
-        const curr = chunks[i];
-        // Calculate time gap
-        const prevEndTime = new Date(prev.metadata.endTime).getTime();
-        const currStartTime = new Date(curr.metadata.startTime).getTime();
-        const timeGapMs = currStartTime - prevEndTime;
-        // Large time gap indicates new topic
-        if (timeGapMs > timeGapThresholdMs) {
-            continue;
-        }
-        // Check for explicit topic shift markers in user text
-        const userText = extractUserText(curr.text);
-        if (hasTopicShiftMarker(userText)) {
-            continue;
+    if (chunks.length < 2)
+        return [];
+    // Group chunk indices by turn index
+    const chunkIndicesByTurn = new Map();
+    for (let ci = 0; ci < chunks.length; ci++) {
+        for (const turnIndex of chunks[ci].metadata.turnIndices) {
+            const existing = chunkIndicesByTurn.get(turnIndex) ?? [];
+            existing.push(ci);
+            chunkIndicesByTurn.set(turnIndex, existing);
         }
-        // Detect reference type and evidence
-        const detection = detectReferenceType(prev.text, curr.text, timeGapMs);
-        results.push({
-            sourceIndex: i - 1,
-            targetIndex: i,
-            type: detection.type,
-            confidence: detection.confidence,
-            evidence: detection.evidence,
-        });
-    }
-    return results;
-}
-/**
- * Detect the type of reference between two chunk texts.
- */
-function detectReferenceType(prevText, currText, timeGapMs) {
-    // Extract structured data for analysis
-    const prevPaths = extractFilePaths(prevText);
-    const currPaths = extractFilePaths(currText);
-    const prevKeywords = extractKeywords(prevText);
-    const currKeywords = extractKeywords(currText);
-    // Check for file path references
-    const pathOverlap = computePathOverlap(prevPaths, currPaths);
-    if (pathOverlap > 0) {
-        const sharedPaths = [...currPaths].filter((p) => prevPaths.has(p));
-        return {
-            type: 'file-path',
-            confidence: Math.min(0.9, 0.7 + pathOverlap * 0.2),
-            evidence: `Shared paths: ${sharedPaths.slice(0, 3).join(', ')}`,
-        };
-    }
-    // Check for code entity references (function names, variables)
-    const codeEntities = detectCodeEntities(prevText, currText);
-    if (codeEntities.length > 0) {
-        return {
-            type: 'code-entity',
-            confidence: 0.8,
-            evidence: `Code entities: ${codeEntities.slice(0, 3).join(', ')}`,
-        };
     }
-    // Check for error fragment references
-    const errorMatch = detectErrorReference(prevText, currText);
-    if (errorMatch) {
-        return {
-            type: 'error-fragment',
-            confidence: 0.9,
-            evidence: `Error: ${errorMatch.slice(0, 50)}`,
-        };
-    }
-    // Check for explicit backreferences
-    if (hasExplicitBackreference(currText)) {
-        return {
-            type: 'explicit-backref',
-            confidence: 0.85,
-            evidence: 'Explicit backreference detected',
-        };
-    }
-    // Check for tool output references
-    const toolRef = detectToolOutputReference(prevText, currText);
-    if (toolRef) {
-        return {
-            type: 'tool-output',
-            confidence: 0.8,
-            evidence: `Tool: ${toolRef}`,
-        };
-    }
-    // Default: adjacent with keyword overlap
-    const keywordOverlap = computeKeywordOverlap(prevText, currText);
-    const baseConfidence = timeGapMs < 5 * 60 * 1000 ? 0.6 : 0.4;
-    return {
-        type: 'adjacent',
-        confidence: Math.min(0.7, baseConfidence + keywordOverlap * 0.2),
-        evidence: `Adjacent, keyword overlap: ${(keywordOverlap * 100).toFixed(0)}%`,
-    };
-}
-/**
- * Compute overlap between two path sets.
- */
-function computePathOverlap(a, b) {
-    if (a.size === 0 || b.size === 0)
-        return 0;
-    let intersection = 0;
-    for (const item of b) {
-        if (a.has(item))
-            intersection++;
-    }
-    return intersection / Math.min(a.size, b.size);
-}
-/**
- * Detect shared code entities (function names, class names, etc.).
- */
-function detectCodeEntities(prevText, currText) {
-    // Pattern for camelCase or PascalCase identifiers
-    const identifierPattern = /\b([a-z][a-zA-Z0-9]+|[A-Z][a-zA-Z0-9]+)\b/g;
-    const prevIds = new Set();
-    let match;
-    while ((match = identifierPattern.exec(prevText)) !== null) {
-        const id = match[1];
-        if (id.length >= 4 && !isCommonWord(id)) {
-            prevIds.add(id.toLowerCase());
-        }
+    // Sort unique turn indices
+    const sortedTurns = [...chunkIndicesByTurn.keys()].sort((a, b) => a - b);
+    // Track emitted pairs for deduplication
+    const emittedPairs = new Set();
+    const results = [];
+    function emitEdge(srcIdx, tgtIdx, type, evidence) {
+        const pairKey = `${srcIdx}:${tgtIdx}`;
+        if (emittedPairs.has(pairKey))
+            return;
+        if (srcIdx === tgtIdx)
+            return;
+        emittedPairs.add(pairKey);
+        results.push({ sourceIndex: srcIdx, targetIndex: tgtIdx, type, confidence: 1.0, evidence });
     }
-    const shared = [];
-    const currPattern = new RegExp(identifierPattern.source, 'g');
-    while ((match = currPattern.exec(currText)) !== null) {
-        const id = match[1];
-        if (prevIds.has(id.toLowerCase()) && !shared.includes(id)) {
-            shared.push(id);
+    for (let ti = 0; ti < sortedTurns.length; ti++) {
+        const turn = sortedTurns[ti];
+        const chunkIndices = chunkIndicesByTurn.get(turn);
+        // Intra-turn sequential edges (C1→C2→C3)
+        for (let ci = 0; ci < chunkIndices.length - 1; ci++) {
+            emitEdge(chunkIndices[ci], chunkIndices[ci + 1], 'within-chain', `Intra-turn sequential: turn ${turn}, chunk ${ci} → ${ci + 1}`);
         }
-    }
-    return shared;
-}
-/**
- * Check if an identifier is a common programming word.
- */
-function isCommonWord(word) {
-    const common = new Set([
-        'function', 'const', 'let', 'var', 'return', 'import', 'export',
-        'async', 'await', 'class', 'interface', 'type', 'string', 'number',
-        'boolean', 'null', 'undefined', 'true', 'false', 'error', 'result',
-        'value', 'data', 'item', 'index', 'length', 'name', 'path', 'file',
-    ]);
-    return common.has(word.toLowerCase());
-}
-/**
- * Detect error message reference between texts.
- */
-function detectErrorReference(prevText, currText) {
-    // Look for error patterns in previous text
-    const errorPatterns = [
-        /Error:\s*(.+?)(?:\n|$)/gi,
-        /error\[.+?\]:\s*(.+?)(?:\n|$)/gi,
-        /TypeError:\s*(.+?)(?:\n|$)/gi,
-        /ReferenceError:\s*(.+?)(?:\n|$)/gi,
-        /SyntaxError:\s*(.+?)(?:\n|$)/gi,
-    ];
-    for (const pattern of errorPatterns) {
-        const prevMatches = [...prevText.matchAll(pattern)];
-        for (const match of prevMatches) {
-            const errorFragment = match[1].trim().slice(0, 30);
-            if (errorFragment.length > 5 && currText.includes(errorFragment)) {
-                return match[0].trim();
-            }
+        // Inter-turn edge: last chunk of this turn → first chunk of next turn
+        if (ti < sortedTurns.length - 1) {
+            const nextTurn = sortedTurns[ti + 1];
+            const nextChunkIndices = chunkIndicesByTurn.get(nextTurn);
+            // Topic shift gating
+            const lastChunkIdx = chunkIndices[chunkIndices.length - 1];
+            const firstNextChunkIdx = nextChunkIndices[0];
+            const lastChunk = chunks[lastChunkIdx];
+            const firstNextChunk = chunks[firstNextChunkIdx];
+            const timeGapMs = getTimeGapMs(lastChunk, firstNextChunk);
+            if (timeGapMs > timeGapThresholdMs)
+                continue;
+            const userText = extractUserText(firstNextChunk.text);
+            if (hasTopicShiftMarker(userText))
+                continue;
+            emitEdge(lastChunkIdx, firstNextChunkIdx, 'within-chain', `Inter-turn sequential: turn ${turn} → turn ${nextTurn}`);
         }
     }
-    return null;
-}
-/**
- * Check for explicit backreference phrases.
- */
-function hasExplicitBackreference(text) {
-    const patterns = [
-        /\b(the|that|this)\s+(error|issue|problem|bug|fix|solution|code|file|function)\b/i,
-        /\b(as|like)\s+(you|we)\s+(mentioned|discussed|said|showed)\b/i,
-        /\b(from|in)\s+(the|your)\s+(previous|last|earlier)\b/i,
-        /\b(still|again|same)\s+(error|issue|problem)\b/i,
-    ];
-    return patterns.some((p) => p.test(text));
+    return results;
 }
 /**
- * Detect tool output reference (referencing specific tool results).
+ * Legacy alias — detectTransitions now delegates to detectCausalTransitions.
  */
-function detectToolOutputReference(prevText, currText) {
-    // Look for tool result markers in previous text
-    const toolResultPattern = /\[Result:(\w+)\]/g;
-    const tools = new Set();
-    let match;
-    while ((match = toolResultPattern.exec(prevText)) !== null) {
-        tools.add(match[1]);
-    }
-    if (tools.size === 0)
-        return null;
-    // Check if current text references tool output
-    for (const tool of tools) {
-        const toolPatterns = [
-            new RegExp(`\\b(the|that|this)\\s+${tool}\\s*(output|result)`, 'i'),
-            new RegExp(`\\b(from|in)\\s+(the\\s+)?${tool}`, 'i'),
-        ];
-        if (toolPatterns.some((p) => p.test(currText))) {
-            return tool;
-        }
-    }
-    return null;
+export function detectTransitions(chunks, options = {}) {
+    return detectCausalTransitions(chunks, options);
 }
 /**
  * Extract user text from a chunk's rendered text.
@@ -224,7 +92,7 @@ function extractUserText(chunkText) {
     return match ? match[1] : '';
 }
 /**
- * Get time gap between two timestamps in milliseconds.
+ * Get time gap between two chunks in milliseconds.
  */
 export function getTimeGapMs(chunk1, chunk2) {
     const end1 = new Date(chunk1.metadata.endTime).getTime();

package/dist/ingest/edge-detector.js.map

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package/dist/ingest/index.d.ts

@@ -5,10 +5,10 @@ export { ingestSession, chunkToInput } from './ingest-session.js';
 export type { IngestOptions, IngestResult } from './ingest-session.js';
 export { batchIngest, batchIngestDirectory, discoverSessions, filterAlreadyIngested, } from './batch-ingest.js';
 export type { BatchIngestOptions, BatchIngestResult } from './batch-ingest.js';
-export { detectTransitions, getTimeGapMs } from './edge-detector.js';
+export { detectCausalTransitions, detectTransitions, getTimeGapMs } from './edge-detector.js';
 export type { TransitionResult, DetectionOptions } from './edge-detector.js';
-export { createEdgesFromTransitions, createEdgePair, createCrossSessionEdges, TYPE_WEIGHTS, } from './edge-creator.js';
+export { createEdgesFromTransitions, createForwardEdge, createCrossSessionEdges, createBriefEdge, createDebriefEdge, } from './edge-creator.js';
 export type { EdgeCreationResult } from './edge-creator.js';
-export { linkCrossSession, linkAllSessions, isContinuedSession, } from './cross-session-linker.js';
+export { linkCrossSession, linkAllSessions, isContinuedSession } from './cross-session-linker.js';
 export type { CrossSessionLinkResult } from './cross-session-linker.js';
 //# sourceMappingURL=index.d.ts.map

package/dist/ingest/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/ingest/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AAGH,OAAO,EAAE,aAAa,EAAE,YAAY,EAAE,MAAM,qBAAqB,CAAC;AAClE,YAAY,EAAE,aAAa,EAAE,YAAY,EAAE,MAAM,qBAAqB,CAAC;AAGvE,OAAO,EACL,WAAW,EACX,oBAAoB,EACpB,gBAAgB,EAChB,qBAAqB,GACtB,MAAM,mBAAmB,CAAC;AAC3B,YAAY,EAAE,kBAAkB,EAAE,iBAAiB,EAAE,MAAM,mBAAmB,CAAC;AAG/E,OAAO,EAAE,uBAAuB,EAAE,iBAAiB,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAC9F,YAAY,EAAE,gBAAgB,EAAE,gBAAgB,EAAE,MAAM,oBAAoB,CAAC;AAG7E,OAAO,EACL,0BAA0B,EAC1B,iBAAiB,EACjB,uBAAuB,EACvB,eAAe,EACf,iBAAiB,GAClB,MAAM,mBAAmB,CAAC;AAC3B,YAAY,EAAE,kBAAkB,EAAE,MAAM,mBAAmB,CAAC;AAG5D,OAAO,EAAE,gBAAgB,EAAE,eAAe,EAAE,kBAAkB,EAAE,MAAM,2BAA2B,CAAC;AAClG,YAAY,EAAE,sBAAsB,EAAE,MAAM,2BAA2B,CAAC"}

package/dist/ingest/index.js

@@ -6,9 +6,9 @@ export { ingestSession, chunkToInput } from './ingest-session.js';
 // Batch ingestion
 export { batchIngest, batchIngestDirectory, discoverSessions, filterAlreadyIngested, } from './batch-ingest.js';
 // Edge detection
-export { detectTransitions, getTimeGapMs } from './edge-detector.js';
+export { detectCausalTransitions, detectTransitions, getTimeGapMs } from './edge-detector.js';
 // Edge creation
-export { createEdgesFromTransitions, createEdgePair, createCrossSessionEdges, TYPE_WEIGHTS, } from './edge-creator.js';
+export { createEdgesFromTransitions, createForwardEdge, createCrossSessionEdges, createBriefEdge, createDebriefEdge, } from './edge-creator.js';
 // Cross-session linking
-export { linkCrossSession, linkAllSessions, isContinuedSession, } from './cross-session-linker.js';
+export { linkCrossSession, linkAllSessions, isContinuedSession } from './cross-session-linker.js';
 //# sourceMappingURL=index.js.map

package/dist/ingest/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/ingest/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,iBAAiB;AACjB,OAAO,EAAE,aAAa,EAAE,YAAY,EAAE,MAAM,qBAAqB,CAAC;AAGlE,kBAAkB;AAClB,OAAO,EACL,WAAW,EACX,oBAAoB,EACpB,gBAAgB,EAChB,qBAAqB,GACtB,MAAM,mBAAmB,CAAC;AAG3B,iBAAiB;AACjB,OAAO,EAAE,uBAAuB,EAAE,iBAAiB,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAG9F,gBAAgB;AAChB,OAAO,EACL,0BAA0B,EAC1B,iBAAiB,EACjB,uBAAuB,EACvB,eAAe,EACf,iBAAiB,GAClB,MAAM,mBAAmB,CAAC;AAG3B,wBAAwB;AACxB,OAAO,EAAE,gBAAgB,EAAE,eAAe,EAAE,kBAAkB,EAAE,MAAM,2BAA2B,CAAC"}

package/dist/ingest/ingest-session.d.ts

@@ -1,14 +1,13 @@
 /**
  * Session ingestion orchestrator.
  * Parses, chunks, embeds, and stores a single session.
- * Supports sub-agent discovery, vector clock tracking, and performance optimizations:
+ * Supports sub-agent discovery and performance optimizations:
  * - True batch embedding for faster inference
  * - Content-hash caching to skip unchanged content
  * - Incremental ingestion via checkpoints
  * - File mtime checks to skip unchanged files
  * - Streaming for large files
  */
-import { type ChunkWithClock } from '../parser/chunker.js';
 import { Embedder } from '../models/embedder.js';
 import type { ChunkInput } from '../storage/types.js';
 import type { Chunk } from '../parser/types.js';
@@ -30,8 +29,6 @@ export interface IngestOptions {
     embedder?: Embedder;
     /** Process sub-agents. Default: true. */
     processSubAgents?: boolean;
-    /** Use vector clocks. Default: true. */
-    useVectorClocks?: boolean;
     /** Use incremental ingestion (resume from checkpoints). Default: true. */
     useIncrementalIngestion?: boolean;
     /** Use embedding cache. Default: true. */
@@ -76,8 +73,4 @@ export declare function ingestSession(sessionPath: string, options?: IngestOptio
  * Convert parser Chunk to storage ChunkInput.
  */
 export declare function chunkToInput(chunk: Chunk): ChunkInput;
-/**
- * Convert parser ChunkWithClock to storage ChunkInput.
- */
-export declare function chunkWithClockToInput(chunk: ChunkWithClock): ChunkInput;
 //# sourceMappingURL=ingest-session.d.ts.map

package/dist/ingest/ingest-session.d.ts.map

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