bonecode 1.0.0 → 1.2.0

package/dist/bone/output/rag/src/extensions.d.ts

@@ -0,0 +1,83 @@
+/**
+ * Extension point: embed_text
+ * STABLE: implementation required.
+ */
+export declare function embed_text(text: string, model: string): Promise<number[]>;
+/**
+ * Extension point: embed_batch
+ * STABLE: implementation required.
+ */
+export declare function embed_batch(texts: string[], model: string): Promise<number[][]>;
+/**
+ * Extension point: chunk_file
+ * STABLE: implementation required.
+ */
+export declare function chunk_file(file_path: string, content: string, strategy: string, chunk_size: number, overlap: number): Array<{
+    content: string;
+    start_line: number;
+    end_line: number;
+    chunk_index: number;
+    language?: string;
+    symbol_name?: string;
+    symbol_type?: string;
+}>;
+/**
+ * Extension point: hybrid_search
+ * STABLE: implementation required.
+ */
+export declare function hybrid_search(knowledge_base_id: string, query_embedding: number[], query_text: string, filters: {
+    language?: string;
+    symbol_type?: string;
+    file_path_pattern?: string;
+}, limit: number): Promise<Array<{
+    chunk_id: string;
+    file_path: string;
+    content: string;
+    start_line: number;
+    end_line: number;
+    language?: string;
+    symbol_name?: string;
+    symbol_type?: string;
+    score: number;
+}>>;
+/**
+ * Extension point: scan_directory
+ * STABLE: implementation required.
+ */
+export declare function scan_directory(root_path: string, ignore_patterns: string[]): string[];
+/**
+ * Extension point: detect_language
+ * Optional.
+ */
+export declare function detect_language(file_path: string): string;
+/**
+ * Extension point: bulk_insert_chunks
+ * STABLE: implementation required.
+ * Inserts all chunks for a file in a single parameterized query.
+ * Returns the number of chunks inserted.
+ */
+export declare function bulk_insert_chunks(chunks: Array<{
+    id: string;
+    code_file_id: string;
+    knowledge_base_id: string;
+    project_id: string;
+    content: string;
+    start_line: number;
+    end_line: number;
+    chunk_index: number;
+    language: string;
+    symbol_name?: string;
+    symbol_type?: string;
+    embedding?: number[];
+}>): Promise<number>;
+/**
+ * Extension point: read_file_async
+ * STABLE: implementation required.
+ * Reads a file and returns its content, hash, size, and mtime.
+ */
+export declare function read_file_async(file_path: string): Promise<{
+    content: string;
+    hash: string;
+    size: number;
+    mtime: string;
+} | null>;

package/dist/bone/output/rag/src/extensions.js

@@ -0,0 +1,329 @@
+"use strict";
+// Generated by BoneScript compiler.
+// Extension points: implement the functions below.
+// Code between sentinel comments is preserved on recompile.
+// DO NOT remove the sentinel comments.
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || function (mod) {
+    if (mod && mod.__esModule) return mod;
+    var result = {};
+    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    __setModuleDefault(result, mod);
+    return result;
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.read_file_async = exports.bulk_insert_chunks = exports.detect_language = exports.scan_directory = exports.hybrid_search = exports.chunk_file = exports.embed_batch = exports.embed_text = void 0;
+const fs = __importStar(require("fs"));
+const path = __importStar(require("path"));
+const db_1 = require("./db");
+const metrics_1 = require("./metrics");
+// ─── Shared fetch helper (uses env-configured embedding endpoint) ─────────────
+async function embeddingFetch(body) {
+    const baseUrl = process.env.EMBEDDING_BASE_URL || process.env.OPENAI_BASE_URL || "https://api.openai.com/v1";
+    const apiKey = process.env.EMBEDDING_API_KEY || process.env.OPENAI_API_KEY || "not-needed";
+    return fetch(`${baseUrl}/embeddings`, {
+        method: "POST",
+        headers: { "Content-Type": "application/json", Authorization: `Bearer ${apiKey}` },
+        body: JSON.stringify(body),
+    });
+}
+/**
+ * Extension point: embed_text
+ * STABLE: implementation required.
+ */
+async function embed_text(text, model) {
+    // <bonescript:ext:embed_text:begin>
+    const effectiveModel = model || process.env.EMBEDDING_MODEL || "text-embedding-nomic-embed-text-v1.5";
+    const r = await embeddingFetch({ model: effectiveModel, input: text });
+    if (!r.ok)
+        throw new Error(`Embedding API error ${r.status}: ${await r.text()}`);
+    const data = await r.json();
+    (0, metrics_1.counter)("rag.embed.single", { model: effectiveModel });
+    return data.data[0].embedding;
+    // <bonescript:ext:embed_text:end>
+}
+exports.embed_text = embed_text;
+/**
+ * Extension point: embed_batch
+ * STABLE: implementation required.
+ */
+async function embed_batch(texts, model) {
+    // <bonescript:ext:embed_batch:begin>
+    if (texts.length === 0)
+        return [];
+    const effectiveModel = model || process.env.EMBEDDING_MODEL || "text-embedding-nomic-embed-text-v1.5";
+    const BATCH = 100;
+    const results = [];
+    for (let i = 0; i < texts.length; i += BATCH) {
+        const batch = texts.slice(i, i + BATCH);
+        const r = await embeddingFetch({ model: effectiveModel, input: batch });
+        if (!r.ok)
+            throw new Error(`Embedding batch API error ${r.status}: ${await r.text()}`);
+        const data = await r.json();
+        const sorted = data.data.sort((a, b) => a.index - b.index);
+        results.push(...sorted.map((d) => d.embedding));
+        (0, metrics_1.counter)("rag.embed.batch", { model: effectiveModel, count: String(batch.length) });
+    }
+    return results;
+    // <bonescript:ext:embed_batch:end>
+}
+exports.embed_batch = embed_batch;
+/**
+ * Extension point: chunk_file
+ * STABLE: implementation required.
+ */
+function chunk_file(file_path, content, strategy, chunk_size, overlap) {
+    // <bonescript:ext:chunk_file:begin>
+    const language = detect_language(file_path);
+    const lines = content.split("\n");
+    const linesPerChunk = Math.max(10, Math.floor(chunk_size / 80));
+    const overlapLines = Math.max(0, Math.floor(overlap / 80));
+    const chunks = [];
+    let chunkIndex = 0;
+    // AST-aware: detect symbol boundaries for TS/JS/Python/Go
+    const symbolPatterns = {
+        typescript: [/^(export\s+)?(async\s+)?function\s+(\w+)/, /^(export\s+)?(abstract\s+)?class\s+(\w+)/, /^(export\s+)?interface\s+(\w+)/, /^(export\s+)?const\s+(\w+)\s*=/],
+        javascript: [/^(export\s+)?(async\s+)?function\s+(\w+)/, /^(export\s+)?class\s+(\w+)/, /^(export\s+)?const\s+(\w+)\s*=/],
+        python: [/^(async\s+)?def\s+(\w+)/, /^class\s+(\w+)/],
+        go: [/^func\s+(\w+)/, /^type\s+(\w+)\s+struct/],
+    };
+    const patterns = strategy === "ast" ? (symbolPatterns[language] || []) : [];
+    let currentStart = 0;
+    let currentLines = [];
+    let currentSymbol = null;
+    const flush = () => {
+        const text = currentLines.join("\n").trim();
+        if (text.length > 0) {
+            chunks.push({
+                content: currentLines.join("\n"),
+                start_line: currentStart + 1,
+                end_line: currentStart + currentLines.length,
+                chunk_index: chunkIndex++,
+                language,
+                symbol_name: currentSymbol?.name,
+                symbol_type: currentSymbol?.type,
+            });
+        }
+    };
+    for (let i = 0; i < lines.length; i++) {
+        const line = lines[i];
+        let isSymbolBoundary = false;
+        let symbolName = "";
+        let symbolType = "block";
+        for (const pat of patterns) {
+            const m = line.match(pat);
+            if (m) {
+                isSymbolBoundary = true;
+                symbolName = m[m.length - 1] || "";
+                symbolType = /function|def|func/.test(line) ? "function" : /class/.test(line) ? "class" : /interface/.test(line) ? "interface" : "variable";
+                break;
+            }
+        }
+        if (isSymbolBoundary && currentLines.length > 0) {
+            flush();
+            const overlapStart = Math.max(0, i - overlapLines);
+            currentStart = overlapStart;
+            currentLines = lines.slice(overlapStart, i);
+            currentSymbol = { name: symbolName, type: symbolType };
+        }
+        currentLines.push(line);
+        // Also split on size overflow
+        if (currentLines.join("\n").length > chunk_size && currentLines.length > 10) {
+            flush();
+            const overlapStart = Math.max(0, currentStart + currentLines.length - overlapLines);
+            currentStart = overlapStart;
+            currentLines = lines.slice(overlapStart, i + 1);
+            currentSymbol = null;
+        }
+    }
+    flush();
+    // Fallback: if no chunks produced, use line-based sliding window
+    if (chunks.length === 0) {
+        for (let i = 0; i < lines.length; i += linesPerChunk - overlapLines) {
+            const end = Math.min(i + linesPerChunk, lines.length);
+            const text = lines.slice(i, end).join("\n").trim();
+            if (text.length > 0) {
+                chunks.push({ content: lines.slice(i, end).join("\n"), start_line: i + 1, end_line: end, chunk_index: chunkIndex++, language });
+            }
+            if (end >= lines.length)
+                break;
+        }
+    }
+    return chunks;
+    // <bonescript:ext:chunk_file:end>
+}
+exports.chunk_file = chunk_file;
+/**
+ * Extension point: hybrid_search
+ * STABLE: implementation required.
+ */
+async function hybrid_search(knowledge_base_id, query_embedding, query_text, filters, limit) {
+    // <bonescript:ext:hybrid_search:begin>
+    const embStr = "[" + query_embedding.join(",") + "]";
+    const result = await db_1.pool.query("SELECT * FROM bonecode_hybrid_search($1, $2::vector, $3, $4, $5, $6)", [knowledge_base_id, embStr, query_text, filters?.language || null, filters?.symbol_type || null, limit]);
+    (0, metrics_1.counter)("rag.search.hybrid", { knowledge_base_id, results: String(result.rows.length) });
+    return result.rows.map((row) => ({
+        chunk_id: row.chunk_id,
+        file_path: row.file_path,
+        content: row.content,
+        start_line: Number(row.start_line),
+        end_line: Number(row.end_line),
+        language: row.language,
+        symbol_name: row.symbol_name,
+        symbol_type: row.symbol_type,
+        score: row.rrf_score,
+        vector_score: row.vector_score,
+        text_score: row.text_score,
+    }));
+    // <bonescript:ext:hybrid_search:end>
+}
+exports.hybrid_search = hybrid_search;
+/**
+ * Extension point: scan_directory
+ * STABLE: implementation required.
+ */
+function scan_directory(root_path, ignore_patterns) {
+    // <bonescript:ext:scan_directory:begin>
+    const DEFAULT_IGNORE = [
+        "node_modules", ".git", "dist", "build", ".next", "__pycache__",
+        ".venv", "venv", "target", "vendor", ".cache", "coverage",
+        ...(ignore_patterns || []),
+    ];
+    const SUPPORTED_EXTS = new Set([
+        ".ts", ".tsx", ".js", ".jsx", ".mjs", ".cjs",
+        ".py", ".go", ".rs", ".java", ".kt", ".cs", ".cpp", ".c", ".h",
+        ".rb", ".php", ".swift", ".scala", ".r", ".sql",
+        ".md", ".mdx", ".json", ".yaml", ".yml", ".toml",
+        ".graphql", ".gql", ".proto",
+    ]);
+    const MAX_FILE_SIZE = 500 * 1024; // 500KB
+    const results = [];
+    function walk(dir) {
+        let entries;
+        try {
+            entries = fs.readdirSync(dir, { withFileTypes: true });
+        }
+        catch {
+            return;
+        }
+        for (const entry of entries) {
+            if (DEFAULT_IGNORE.some(ig => entry.name === ig || entry.name.startsWith(".")))
+                continue;
+            const fullPath = path.join(dir, entry.name);
+            if (entry.isDirectory()) {
+                walk(fullPath);
+            }
+            else if (entry.isFile()) {
+                const ext = path.extname(entry.name).toLowerCase();
+                if (!SUPPORTED_EXTS.has(ext))
+                    continue;
+                try {
+                    const stat = fs.statSync(fullPath);
+                    if (stat.size > MAX_FILE_SIZE)
+                        continue;
+                    results.push(fullPath);
+                }
+                catch {
+                    continue;
+                }
+            }
+        }
+    }
+    walk(root_path);
+    return results;
+    // <bonescript:ext:scan_directory:end>
+}
+exports.scan_directory = scan_directory;
+/**
+ * Extension point: detect_language
+ * Optional.
+ */
+function detect_language(file_path) {
+    // <bonescript:ext:detect_language:begin>
+    const ext = path.extname(file_path).toLowerCase();
+    const base = path.basename(file_path).toLowerCase();
+    if (base === "dockerfile")
+        return "dockerfile";
+    if (base === "makefile")
+        return "makefile";
+    const map = {
+        ".ts": "typescript", ".tsx": "typescript",
+        ".js": "javascript", ".jsx": "javascript", ".mjs": "javascript", ".cjs": "javascript",
+        ".py": "python", ".go": "go", ".rs": "rust", ".java": "java",
+        ".kt": "kotlin", ".cs": "csharp", ".cpp": "cpp", ".c": "c", ".h": "cpp",
+        ".rb": "ruby", ".php": "php", ".swift": "swift", ".scala": "scala",
+        ".sql": "sql", ".sh": "bash", ".bash": "bash",
+        ".md": "markdown", ".mdx": "markdown",
+        ".json": "json", ".yaml": "yaml", ".yml": "yaml", ".toml": "toml",
+        ".graphql": "graphql", ".gql": "graphql", ".proto": "protobuf",
+    };
+    return map[ext] || "text";
+    // <bonescript:ext:detect_language:end>
+}
+exports.detect_language = detect_language;
+/**
+ * Extension point: bulk_insert_chunks
+ * STABLE: implementation required.
+ * Inserts all chunks for a file in a single parameterized query.
+ * Returns the number of chunks inserted.
+ */
+async function bulk_insert_chunks(chunks) {
+    // <bonescript:ext:bulk_insert_chunks:begin>
+    if (chunks.length === 0)
+        return 0;
+    // Build a single multi-row INSERT for all chunks
+    const values = [];
+    const placeholders = chunks.map((c, i) => {
+        const base = i * 12;
+        const embStr = c.embedding ? "[" + c.embedding.join(",") + "]" : null;
+        values.push(c.id, c.code_file_id, c.knowledge_base_id, c.project_id, c.content, c.start_line, c.end_line, c.chunk_index, c.language, c.symbol_name || null, c.symbol_type || null, embStr);
+        return `($${base + 1},$${base + 2},$${base + 3},$${base + 4},$${base + 5},$${base + 6},$${base + 7},$${base + 8},$${base + 9},$${base + 10},$${base + 11},$${base + 12}::vector)`;
+    });
+    await db_1.pool.query(`INSERT INTO code_chunks
+       (id, code_file_id, knowledge_base_id, project_id, content, start_line, end_line,
+        chunk_index, language, symbol_name, symbol_type, embedding)
+     VALUES ${placeholders.join(",")}
+     ON CONFLICT DO NOTHING`, values);
+    (0, metrics_1.counter)("rag.chunks.inserted", { count: String(chunks.length) });
+    return chunks.length;
+    // <bonescript:ext:bulk_insert_chunks:end>
+}
+exports.bulk_insert_chunks = bulk_insert_chunks;
+/**
+ * Extension point: read_file_async
+ * STABLE: implementation required.
+ * Reads a file and returns its content, hash, size, and mtime.
+ */
+async function read_file_async(file_path) {
+    // <bonescript:ext:read_file_async:begin>
+    const fsPromises = require("fs/promises");
+    try {
+        const [content, stat] = await Promise.all([
+            fsPromises.readFile(file_path, "utf-8"),
+            fsPromises.stat(file_path),
+        ]);
+        const hash = require("crypto").createHash("sha256").update(content).digest("hex");
+        return { content, hash, size: stat.size, mtime: new Date(stat.mtimeMs).toISOString() };
+    }
+    catch {
+        return null; // File unreadable — skip
+    }
+    // <bonescript:ext:read_file_async:end>
+}
+exports.read_file_async = read_file_async;
+//# sourceMappingURL=extensions.js.map

package/dist/bone/output/rag/src/extensions.js.map

@@ -0,0 +1 @@
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package/dist/bone/output/rag/src/flows.d.ts

@@ -0,0 +1,24 @@
+export interface FlowStep {
+    name: string;
+    action: (ctx: any) => Promise<void>;
+    compensation: ((ctx: any) => Promise<void>) | null;
+}
+export interface FlowResult {
+    ok: boolean;
+    failed_step?: string;
+    compensated: string[];
+    error?: string;
+}
+export declare function executeFlow(name: string, steps: FlowStep[], ctx: any): Promise<FlowResult>;
+export declare function execute_ingest_codebase_pipeline(ctx: {
+    req: any;
+    res: any;
+    auth: any;
+    client?: any;
+}): Promise<FlowResult>;
+export declare function execute_reindex_file_pipeline(ctx: {
+    req: any;
+    res: any;
+    auth: any;
+    client?: any;
+}): Promise<FlowResult>;