boltz-api 0.35.2 → 0.36.0

package/src/resources/protein/library-screen.ts

@@ -443,13 +443,11 @@ export namespace LibraryScreenRetrieveResponse {
          * Post-translational modifications. Optional; defaults to an empty list when
          * omitted.
          */
-        modifications?: Array<
-          ProteinEntityResponse.CcdModificationResponse | ProteinEntityResponse.SmilesModificationResponse
-        >;
+        modifications?: Array<ProteinEntityResponse.Modification>;
       }
 
       export namespace ProteinEntityResponse {
-        export interface CcdModificationResponse {
+        export interface Modification {
           /**
            * 0-based index of the residue to modify
            */
@@ -463,20 +461,6 @@ export namespace LibraryScreenRetrieveResponse {
            */
           value: string;
         }
-
-        export interface SmilesModificationResponse {
-          /**
-           * 0-based index of the residue to modify
-           */
-          residue_index: number;
-
-          type: 'smiles';
-
-          /**
-           * SMILES string for the modification
-           */
-          value: string;
-        }
       }
 
       export interface RnaEntityResponse {
@@ -500,13 +484,11 @@ export namespace LibraryScreenRetrieveResponse {
         /**
          * Chemical modifications. Optional; defaults to an empty list when omitted.
          */
-        modifications?: Array<
-          RnaEntityResponse.CcdModificationResponse | RnaEntityResponse.SmilesModificationResponse
-        >;
+        modifications?: Array<RnaEntityResponse.Modification>;
       }
 
       export namespace RnaEntityResponse {
-        export interface CcdModificationResponse {
+        export interface Modification {
           /**
            * 0-based index of the residue to modify
            */
@@ -520,20 +502,6 @@ export namespace LibraryScreenRetrieveResponse {
            */
           value: string;
         }
-
-        export interface SmilesModificationResponse {
-          /**
-           * 0-based index of the residue to modify
-           */
-          residue_index: number;
-
-          type: 'smiles';
-
-          /**
-           * SMILES string for the modification
-           */
-          value: string;
-        }
       }
 
       export interface DnaEntityResponse {
@@ -557,13 +525,11 @@ export namespace LibraryScreenRetrieveResponse {
         /**
          * Chemical modifications. Optional; defaults to an empty list when omitted.
          */
-        modifications?: Array<
-          DnaEntityResponse.CcdModificationResponse | DnaEntityResponse.SmilesModificationResponse
-        >;
+        modifications?: Array<DnaEntityResponse.Modification>;
       }
 
       export namespace DnaEntityResponse {
-        export interface CcdModificationResponse {
+        export interface Modification {
           /**
            * 0-based index of the residue to modify
            */
@@ -577,20 +543,6 @@ export namespace LibraryScreenRetrieveResponse {
            */
           value: string;
         }
-
-        export interface SmilesModificationResponse {
-          /**
-           * 0-based index of the residue to modify
-           */
-          residue_index: number;
-
-          type: 'smiles';
-
-          /**
-           * SMILES string for the modification
-           */
-          value: string;
-        }
       }
 
       export interface LigandCcdEntityResponse {
@@ -1127,11 +1079,11 @@ export namespace LibraryScreenListResultsResponse {
      * Post-translational modifications. Optional; defaults to an empty list when
      * omitted.
      */
-    modifications?: Array<ProteinEntity.CcdModification | ProteinEntity.SmilesModification>;
+    modifications?: Array<ProteinEntity.Modification>;
   }
 
   export namespace ProteinEntity {
-    export interface CcdModification {
+    export interface Modification {
       /**
        * 0-based index of the residue to modify
        */
@@ -1145,20 +1097,6 @@ export namespace LibraryScreenListResultsResponse {
        */
       value: string;
     }
-
-    export interface SmilesModification {
-      /**
-       * 0-based index of the residue to modify
-       */
-      residue_index: number;
-
-      type: 'smiles';
-
-      /**
-       * SMILES string for the modification
-       */
-      value: string;
-    }
   }
 
   export interface RnaEntity {
@@ -1182,11 +1120,11 @@ export namespace LibraryScreenListResultsResponse {
     /**
      * Chemical modifications. Optional; defaults to an empty list when omitted.
      */
-    modifications?: Array<RnaEntity.CcdModification | RnaEntity.SmilesModification>;
+    modifications?: Array<RnaEntity.Modification>;
   }
 
   export namespace RnaEntity {
-    export interface CcdModification {
+    export interface Modification {
       /**
        * 0-based index of the residue to modify
        */
@@ -1200,20 +1138,6 @@ export namespace LibraryScreenListResultsResponse {
        */
       value: string;
     }
-
-    export interface SmilesModification {
-      /**
-       * 0-based index of the residue to modify
-       */
-      residue_index: number;
-
-      type: 'smiles';
-
-      /**
-       * SMILES string for the modification
-       */
-      value: string;
-    }
   }
 
   export interface DnaEntity {
@@ -1237,11 +1161,11 @@ export namespace LibraryScreenListResultsResponse {
     /**
      * Chemical modifications. Optional; defaults to an empty list when omitted.
      */
-    modifications?: Array<DnaEntity.CcdModification | DnaEntity.SmilesModification>;
+    modifications?: Array<DnaEntity.Modification>;
   }
 
   export namespace DnaEntity {
-    export interface CcdModification {
+    export interface Modification {
       /**
        * 0-based index of the residue to modify
        */
@@ -1255,20 +1179,6 @@ export namespace LibraryScreenListResultsResponse {
        */
       value: string;
     }
-
-    export interface SmilesModification {
-      /**
-       * 0-based index of the residue to modify
-       */
-      residue_index: number;
-
-      type: 'smiles';
-
-      /**
-       * SMILES string for the modification
-       */
-      value: string;
-    }
   }
 
   export interface LigandCcdEntity {
@@ -1612,13 +1522,11 @@ export namespace LibraryScreenStartResponse {
          * Post-translational modifications. Optional; defaults to an empty list when
          * omitted.
          */
-        modifications?: Array<
-          ProteinEntityResponse.CcdModificationResponse | ProteinEntityResponse.SmilesModificationResponse
-        >;
+        modifications?: Array<ProteinEntityResponse.Modification>;
       }
 
       export namespace ProteinEntityResponse {
-        export interface CcdModificationResponse {
+        export interface Modification {
           /**
            * 0-based index of the residue to modify
            */
@@ -1632,20 +1540,6 @@ export namespace LibraryScreenStartResponse {
            */
           value: string;
         }
-
-        export interface SmilesModificationResponse {
-          /**
-           * 0-based index of the residue to modify
-           */
-          residue_index: number;
-
-          type: 'smiles';
-
-          /**
-           * SMILES string for the modification
-           */
-          value: string;
-        }
       }
 
       export interface RnaEntityResponse {
@@ -1669,13 +1563,11 @@ export namespace LibraryScreenStartResponse {
         /**
          * Chemical modifications. Optional; defaults to an empty list when omitted.
          */
-        modifications?: Array<
-          RnaEntityResponse.CcdModificationResponse | RnaEntityResponse.SmilesModificationResponse
-        >;
+        modifications?: Array<RnaEntityResponse.Modification>;
       }
 
       export namespace RnaEntityResponse {
-        export interface CcdModificationResponse {
+        export interface Modification {
           /**
            * 0-based index of the residue to modify
            */
@@ -1689,20 +1581,6 @@ export namespace LibraryScreenStartResponse {
            */
           value: string;
         }
-
-        export interface SmilesModificationResponse {
-          /**
-           * 0-based index of the residue to modify
-           */
-          residue_index: number;
-
-          type: 'smiles';
-
-          /**
-           * SMILES string for the modification
-           */
-          value: string;
-        }
       }
 
       export interface DnaEntityResponse {
@@ -1726,13 +1604,11 @@ export namespace LibraryScreenStartResponse {
         /**
          * Chemical modifications. Optional; defaults to an empty list when omitted.
          */
-        modifications?: Array<
-          DnaEntityResponse.CcdModificationResponse | DnaEntityResponse.SmilesModificationResponse
-        >;
+        modifications?: Array<DnaEntityResponse.Modification>;
       }
 
       export namespace DnaEntityResponse {
-        export interface CcdModificationResponse {
+        export interface Modification {
           /**
            * 0-based index of the residue to modify
            */
@@ -1746,20 +1622,6 @@ export namespace LibraryScreenStartResponse {
            */
           value: string;
         }
-
-        export interface SmilesModificationResponse {
-          /**
-           * 0-based index of the residue to modify
-           */
-          residue_index: number;
-
-          type: 'smiles';
-
-          /**
-           * SMILES string for the modification
-           */
-          value: string;
-        }
       }
 
       export interface LigandCcdEntityResponse {
@@ -2298,13 +2160,11 @@ export namespace LibraryScreenStopResponse {
          * Post-translational modifications. Optional; defaults to an empty list when
          * omitted.
          */
-        modifications?: Array<
-          ProteinEntityResponse.CcdModificationResponse | ProteinEntityResponse.SmilesModificationResponse
-        >;
+        modifications?: Array<ProteinEntityResponse.Modification>;
       }
 
       export namespace ProteinEntityResponse {
-        export interface CcdModificationResponse {
+        export interface Modification {
           /**
            * 0-based index of the residue to modify
            */
@@ -2318,20 +2178,6 @@ export namespace LibraryScreenStopResponse {
            */
           value: string;
         }
-
-        export interface SmilesModificationResponse {
-          /**
-           * 0-based index of the residue to modify
-           */
-          residue_index: number;
-
-          type: 'smiles';
-
-          /**
-           * SMILES string for the modification
-           */
-          value: string;
-        }
       }
 
       export interface RnaEntityResponse {
@@ -2355,13 +2201,11 @@ export namespace LibraryScreenStopResponse {
         /**
          * Chemical modifications. Optional; defaults to an empty list when omitted.
          */
-        modifications?: Array<
-          RnaEntityResponse.CcdModificationResponse | RnaEntityResponse.SmilesModificationResponse
-        >;
+        modifications?: Array<RnaEntityResponse.Modification>;
       }
 
       export namespace RnaEntityResponse {
-        export interface CcdModificationResponse {
+        export interface Modification {
           /**
            * 0-based index of the residue to modify
            */
@@ -2375,20 +2219,6 @@ export namespace LibraryScreenStopResponse {
            */
           value: string;
         }
-
-        export interface SmilesModificationResponse {
-          /**
-           * 0-based index of the residue to modify
-           */
-          residue_index: number;
-
-          type: 'smiles';
-
-          /**
-           * SMILES string for the modification
-           */
-          value: string;
-        }
       }
 
       export interface DnaEntityResponse {
@@ -2412,13 +2242,11 @@ export namespace LibraryScreenStopResponse {
         /**
          * Chemical modifications. Optional; defaults to an empty list when omitted.
          */
-        modifications?: Array<
-          DnaEntityResponse.CcdModificationResponse | DnaEntityResponse.SmilesModificationResponse
-        >;
+        modifications?: Array<DnaEntityResponse.Modification>;
       }
 
       export namespace DnaEntityResponse {
-        export interface CcdModificationResponse {
+        export interface Modification {
           /**
            * 0-based index of the residue to modify
            */
@@ -2432,20 +2260,6 @@ export namespace LibraryScreenStopResponse {
            */
           value: string;
         }
-
-        export interface SmilesModificationResponse {
-          /**
-           * 0-based index of the residue to modify
-           */
-          residue_index: number;
-
-          type: 'smiles';
-
-          /**
-           * SMILES string for the modification
-           */
-          value: string;
-        }
       }
 
       export interface LigandCcdEntityResponse {
@@ -2815,11 +2629,11 @@ export namespace LibraryScreenEstimateCostParams {
        * Post-translational modifications. Optional; defaults to an empty list when
        * omitted.
        */
-      modifications?: Array<ProteinEntity.CcdModification | ProteinEntity.SmilesModification>;
+      modifications?: Array<ProteinEntity.Modification>;
     }
 
     export namespace ProteinEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -2833,20 +2647,6 @@ export namespace LibraryScreenEstimateCostParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface RnaEntity {
@@ -2870,11 +2670,11 @@ export namespace LibraryScreenEstimateCostParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<RnaEntity.CcdModification | RnaEntity.SmilesModification>;
+      modifications?: Array<RnaEntity.Modification>;
     }
 
     export namespace RnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -2888,20 +2688,6 @@ export namespace LibraryScreenEstimateCostParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface DnaEntity {
@@ -2925,11 +2711,11 @@ export namespace LibraryScreenEstimateCostParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<DnaEntity.CcdModification | DnaEntity.SmilesModification>;
+      modifications?: Array<DnaEntity.Modification>;
     }
 
     export namespace DnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -2943,20 +2729,6 @@ export namespace LibraryScreenEstimateCostParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface LigandCcdEntity {
@@ -3150,11 +2922,11 @@ export namespace LibraryScreenEstimateCostParams {
        * Post-translational modifications. Optional; defaults to an empty list when
        * omitted.
        */
-      modifications?: Array<ProteinEntity.CcdModification | ProteinEntity.SmilesModification>;
+      modifications?: Array<ProteinEntity.Modification>;
     }
 
     export namespace ProteinEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -3168,20 +2940,6 @@ export namespace LibraryScreenEstimateCostParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface RnaEntity {
@@ -3205,11 +2963,11 @@ export namespace LibraryScreenEstimateCostParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<RnaEntity.CcdModification | RnaEntity.SmilesModification>;
+      modifications?: Array<RnaEntity.Modification>;
     }
 
     export namespace RnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -3223,20 +2981,6 @@ export namespace LibraryScreenEstimateCostParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface DnaEntity {
@@ -3260,11 +3004,11 @@ export namespace LibraryScreenEstimateCostParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<DnaEntity.CcdModification | DnaEntity.SmilesModification>;
+      modifications?: Array<DnaEntity.Modification>;
     }
 
     export namespace DnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -3278,20 +3022,6 @@ export namespace LibraryScreenEstimateCostParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface LigandCcdEntity {
@@ -3623,11 +3353,11 @@ export namespace LibraryScreenStartParams {
        * Post-translational modifications. Optional; defaults to an empty list when
        * omitted.
        */
-      modifications?: Array<ProteinEntity.CcdModification | ProteinEntity.SmilesModification>;
+      modifications?: Array<ProteinEntity.Modification>;
     }
 
     export namespace ProteinEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -3641,20 +3371,6 @@ export namespace LibraryScreenStartParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface RnaEntity {
@@ -3678,11 +3394,11 @@ export namespace LibraryScreenStartParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<RnaEntity.CcdModification | RnaEntity.SmilesModification>;
+      modifications?: Array<RnaEntity.Modification>;
     }
 
     export namespace RnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -3696,20 +3412,6 @@ export namespace LibraryScreenStartParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface DnaEntity {
@@ -3733,11 +3435,11 @@ export namespace LibraryScreenStartParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<DnaEntity.CcdModification | DnaEntity.SmilesModification>;
+      modifications?: Array<DnaEntity.Modification>;
     }
 
     export namespace DnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -3751,20 +3453,6 @@ export namespace LibraryScreenStartParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface LigandCcdEntity {
@@ -3958,11 +3646,11 @@ export namespace LibraryScreenStartParams {
        * Post-translational modifications. Optional; defaults to an empty list when
        * omitted.
        */
-      modifications?: Array<ProteinEntity.CcdModification | ProteinEntity.SmilesModification>;
+      modifications?: Array<ProteinEntity.Modification>;
     }
 
     export namespace ProteinEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -3976,20 +3664,6 @@ export namespace LibraryScreenStartParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface RnaEntity {
@@ -4013,11 +3687,11 @@ export namespace LibraryScreenStartParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<RnaEntity.CcdModification | RnaEntity.SmilesModification>;
+      modifications?: Array<RnaEntity.Modification>;
     }
 
     export namespace RnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -4031,20 +3705,6 @@ export namespace LibraryScreenStartParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface DnaEntity {
@@ -4068,11 +3728,11 @@ export namespace LibraryScreenStartParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<DnaEntity.CcdModification | DnaEntity.SmilesModification>;
+      modifications?: Array<DnaEntity.Modification>;
     }
 
     export namespace DnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -4086,20 +3746,6 @@ export namespace LibraryScreenStartParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface LigandCcdEntity {