atlas-pipeline-mcp 1.0.17 → 1.0.18

package/README.md

@@ -9,12 +9,28 @@ Atlas is an MCP server that gives your IDE "Agentic Superpowers". Instead of jus
 
 ---
 
+## 🚀 What's New in v1.0.18
+
+**6 Powerful New Tools:**
+- 🔒 **atlas_security** - Scan code for vulnerabilities (SQL injection, XSS, secrets, etc.)
+- 🧪 **atlas_test** - Auto-generate comprehensive test cases
+- 📚 **atlas_docs** - Generate documentation (JSDoc, TSDoc, PyDoc)
+- 💡 **atlas_explain** - Explain code with complexity analysis & design patterns
+- 🐛 **atlas_debug** - Debug errors with root cause analysis & fix suggestions
+- 🧠 **atlas_think** - Advanced sequential reasoning with branching & verification
+
+---
+
 ## Key Features
 
 - **Zero Config**: No API keys required. It uses your IDE's built-in AI (Copilot/Cursor) for analysis.
 - **Agentic Workflow**: Breaks down specific tasks into a DAG (Directed Acyclic Graph) of subtasks.
 - **Optimization Loop**: Generates variants, critiques them, and produces a final optimized solution.
 - **Context Aware**: Deeply analyzes project structure, file dependencies, and git history.
+- **Security Scanner**: Detects vulnerabilities with CWE IDs and OWASP categories.
+- **Test Generator**: Creates unit/integration tests for Jest, Vitest, Pytest, Mocha.
+- **Smart Debugging**: Analyzes errors, parses stack traces, suggests fixes.
+- **Sequential Thinking**: Advanced reasoning with branching, revision, and hypothesis verification.
 
 ---
 
@@ -39,6 +55,28 @@ Restart your editor. You should see the Atlas server connected in your MCP setti
 
 ---
 
+## All Available Tools (15 Total)
+
+| Tool | Description |
+| :--- | :--- |
+| `atlas_pipeline` | Full agentic pipeline: Intent → Context → Decompose → Variants → Critique → Optimize |
+| `atlas_intent` | Analyze user intent from natural language |
+| `atlas_context` | Gather project context, dependencies, and structure |
+| `atlas_git` | Analyze Git history, branches, and file changes |
+| `atlas_decompose` | Break down complex tasks into subtasks (DAG) |
+| `atlas_variants` | Generate multiple solution approaches |
+| `atlas_critique` | Review code for quality, security, best practices |
+| `atlas_optimize` | Optimize code based on feedback |
+| `atlas_security` | Scan for security vulnerabilities (CWE, OWASP) |
+| `atlas_test` | Generate comprehensive test cases |
+| `atlas_docs` | Generate documentation (JSDoc/TSDoc/PyDoc) |
+| `atlas_explain` | Explain code with complexity & pattern analysis |
+| `atlas_debug` | Debug errors with root cause analysis |
+| `atlas_think` | Advanced sequential reasoning with branching |
+| `atlas_providers` | Check LLM provider status |
+
+---
+
 ## How to Use (Cheat Sheet)
 
 Once installed, simply chat with your AI Assistant (Copilot Chat or Cursor Chat). The server automatically activates based on your intent.
@@ -50,6 +88,12 @@ Once installed, simply chat with your AI Assistant (Copilot Chat or Cursor Chat)
 | **Explore ideas** | "Generate **3 variants** for this button component." | `atlas_variants` |
 | **Review Code** | "**Critique** this code for security issues." | `atlas_critique` |
 | **Polish Code** | "**Optimize** this function based on best practices." | `atlas_optimize` |
+| **Security Scan** | "**Scan this code for security vulnerabilities**." | `atlas_security` |
+| **Generate Tests** | "**Generate tests** for this authentication module." | `atlas_test` |
+| **Add Documentation** | "**Document** this API with examples." | `atlas_docs` |
+| **Understand Code** | "**Explain** how this algorithm works." | `atlas_explain` |
+| **Debug Error** | "**Debug** this TypeError, here's the stack trace..." | `atlas_debug` |
+| **Complex Reasoning** | "**Think through** how to design this system." | `atlas_think` |
 | **Project Context** | "Analyze the **project context** and dependencies." | `atlas_context` |
 
 ---
@@ -83,4 +127,4 @@ We welcome contributions to improve the Atlas pipeline.
 
 ---
 
-*Built by Antigravity*
+*Built by Nishant Unavane*

package/dist/mcp.js

@@ -44,6 +44,12 @@ import { generateVariants } from './tools/variants.js';
 import { critiqueVariants } from './tools/critique.js';
 import { optimizeVariant } from './tools/optimize.js';
 import { executePipeline } from './pipeline.js';
+import { scanSecurity } from './tools/security.js';
+import { generateTests } from './tools/testgen.js';
+import { generateDocumentation } from './tools/docs.js';
+import { explainCode } from './tools/explain.js';
+import { analyzeError } from './tools/debug.js';
+import { processThought, startSession } from './tools/think.js';
 // ============================================================================
 // Tool Definitions
 // ============================================================================
@@ -179,6 +185,162 @@ const TOOLS = [
             required: ['message', 'projectPath'],
         },
     },
+    {
+        name: 'atlas_security',
+        description: 'Scan code for security vulnerabilities. Detects SQL injection, XSS, hardcoded secrets, weak crypto, and more. Returns findings with severity, CWE IDs, and remediation suggestions.',
+        inputSchema: {
+            type: 'object',
+            properties: {
+                code: { type: 'string', description: 'The code to scan for vulnerabilities' },
+                language: { type: 'string', description: 'Programming language (typescript, javascript, python, etc.)' },
+                context: { type: 'string', description: 'Additional context about the code (e.g., "authentication handler")' },
+            },
+            required: ['code'],
+        },
+    },
+    {
+        name: 'atlas_test',
+        description: 'Generate comprehensive test cases for code. Supports Jest, Vitest, Pytest, Mocha. Includes unit tests, integration tests, edge cases, and mocking suggestions.',
+        inputSchema: {
+            type: 'object',
+            properties: {
+                code: { type: 'string', description: 'The code to generate tests for' },
+                language: { type: 'string', description: 'Programming language' },
+                framework: {
+                    type: 'string',
+                    enum: ['jest', 'vitest', 'pytest', 'mocha', 'auto'],
+                    description: 'Test framework to use (default: auto-detect)'
+                },
+                testType: {
+                    type: 'string',
+                    enum: ['unit', 'integration', 'e2e', 'snapshot', 'property'],
+                    description: 'Type of test to generate (default: unit)'
+                },
+                functionName: { type: 'string', description: 'Specific function to test' },
+                context: { type: 'string', description: 'Additional context about the code' },
+            },
+            required: ['code'],
+        },
+    },
+    {
+        name: 'atlas_docs',
+        description: 'Generate documentation for code. Creates JSDoc/TSDoc/PyDoc comments, README files, API documentation, and usage examples.',
+        inputSchema: {
+            type: 'object',
+            properties: {
+                code: { type: 'string', description: 'The code to document' },
+                language: { type: 'string', description: 'Programming language' },
+                style: {
+                    type: 'string',
+                    enum: ['jsdoc', 'tsdoc', 'pydoc', 'godoc', 'rustdoc', 'auto'],
+                    description: 'Documentation style (default: auto-detect)'
+                },
+                format: {
+                    type: 'string',
+                    enum: ['markdown', 'html', 'json', 'plain'],
+                    description: 'Output format for documentation'
+                },
+                includeExamples: { type: 'boolean', description: 'Include usage examples' },
+                includeTypes: { type: 'boolean', description: 'Include type information' },
+                verbose: { type: 'boolean', description: 'Generate more detailed documentation' },
+            },
+            required: ['code'],
+        },
+    },
+    {
+        name: 'atlas_explain',
+        description: 'Explain code in plain language. Provides line-by-line explanations, algorithm analysis, complexity analysis, design pattern detection, and beginner-friendly glossary.',
+        inputSchema: {
+            type: 'object',
+            properties: {
+                code: { type: 'string', description: 'The code to explain' },
+                level: {
+                    type: 'string',
+                    enum: ['beginner', 'intermediate', 'expert'],
+                    description: 'Explanation detail level'
+                },
+                type: {
+                    type: 'string',
+                    enum: ['overview', 'detailed', 'line-by-line', 'algorithm'],
+                    description: 'Type of explanation'
+                },
+                language: { type: 'string', description: 'Programming language' },
+                focusArea: { type: 'string', description: 'Specific aspect to focus on' },
+                includeComplexity: { type: 'boolean', description: 'Include Big O complexity analysis' },
+                includePatterns: { type: 'boolean', description: 'Include design pattern detection' },
+            },
+            required: ['code'],
+        },
+    },
+    {
+        name: 'atlas_debug',
+        description: 'Analyze errors and provide debugging assistance. Parses stack traces, identifies root causes, suggests fixes with code examples, and explains common error patterns.',
+        inputSchema: {
+            type: 'object',
+            properties: {
+                error: { type: 'string', description: 'The error message' },
+                stackTrace: { type: 'string', description: 'Full stack trace' },
+                code: { type: 'string', description: 'Related code context' },
+                context: { type: 'string', description: 'Additional context about when the error occurs' },
+                language: { type: 'string', description: 'Programming language' },
+                framework: { type: 'string', description: 'Framework in use (React, Express, etc.)' },
+            },
+            required: [],
+        },
+    },
+    {
+        name: 'atlas_think',
+        description: `Advanced sequential thinking for complex problem-solving. Features dynamic branching, hypothesis testing, confidence tracking, and AI-enhanced reasoning.
+
+Use this tool for:
+- Breaking down complex problems step-by-step
+- Multi-path reasoning with branch and merge
+- Hypothesis generation and verification
+- Problems requiring backtracking and revision
+- Building confidence through iterative analysis
+
+Each thought can: question previous steps, branch into alternatives, mark dead ends, propose/verify hypotheses, and merge conclusions.`,
+        inputSchema: {
+            type: 'object',
+            properties: {
+                thought: { type: 'string', description: 'Your current thinking step' },
+                thoughtNumber: { type: 'number', description: 'Current thought number (1-indexed)' },
+                totalThoughts: { type: 'number', description: 'Estimated total thoughts needed (can adjust)' },
+                nextThoughtNeeded: { type: 'boolean', description: 'Whether another thought step is needed' },
+                isRevision: { type: 'boolean', description: 'Whether this revises previous thinking' },
+                revisesThought: { type: 'number', description: 'Which thought number is being reconsidered' },
+                branchFromThought: { type: 'number', description: 'Thought number to branch from' },
+                branchId: { type: 'string', description: 'Identifier for this branch (e.g., "approach-a")' },
+                mergeBranches: {
+                    type: 'array',
+                    items: { type: 'string' },
+                    description: 'Branch IDs to merge conclusions from'
+                },
+                thoughtType: {
+                    type: 'string',
+                    enum: ['analysis', 'hypothesis', 'verification', 'revision', 'synthesis', 'conclusion', 'question', 'exploration', 'backtrack', 'insight'],
+                    description: 'Type of thinking step'
+                },
+                confidence: { type: 'number', description: 'Confidence in current reasoning (0-1)' },
+                hypothesis: { type: 'string', description: 'Hypothesis statement when thoughtType is "hypothesis"' },
+                verificationResult: {
+                    type: 'string',
+                    enum: ['confirmed', 'refuted', 'partial', 'inconclusive'],
+                    description: 'Result when verifying a hypothesis'
+                },
+                isDeadEnd: { type: 'boolean', description: 'Mark this path as a dead end' },
+                keyInsight: { type: 'string', description: 'A key realization to remember' },
+                needsMoreThoughts: { type: 'boolean', description: 'If more thoughts needed beyond estimate' },
+                problemContext: { type: 'string', description: 'Description of the problem being solved' },
+                constraints: {
+                    type: 'array',
+                    items: { type: 'string' },
+                    description: 'Constraints to consider'
+                },
+            },
+            required: ['thought', 'thoughtNumber', 'totalThoughts', 'nextThoughtNeeded'],
+        },
+    },
     {
         name: 'atlas_providers',
         description: 'Check available LLM providers and their status.',
@@ -343,6 +505,107 @@ async function handleTool(name, args) {
                 });
                 return result;
             }
+            case 'atlas_security': {
+                const code = z.string().parse(args['code']);
+                const language = args['language'];
+                const context = args['context'];
+                const result = await scanSecurity(code, language, context);
+                return result;
+            }
+            case 'atlas_test': {
+                const code = z.string().parse(args['code']);
+                const language = args['language'];
+                const framework = args['framework'] ?? 'auto';
+                const testType = args['testType'] ?? 'unit';
+                const result = await generateTests(code, {
+                    language,
+                    framework,
+                    testType,
+                });
+                return result;
+            }
+            case 'atlas_docs': {
+                const code = z.string().parse(args['code']);
+                const language = args['language'];
+                const style = args['style'] ?? 'auto';
+                const includeExamples = args['includeExamples'] ?? true;
+                const result = await generateDocumentation(code, {
+                    language,
+                    style,
+                    includeExamples,
+                });
+                return result;
+            }
+            case 'atlas_explain': {
+                const code = z.string().parse(args['code']);
+                const level = args['level'] ?? 'intermediate';
+                const type = args['type'] ?? 'overview';
+                const language = args['language'];
+                const focusArea = args['focusArea'];
+                const includeComplexity = args['includeComplexity'] ?? true;
+                const includePatterns = args['includePatterns'] ?? true;
+                const result = await explainCode(code, {
+                    level,
+                    type,
+                    language,
+                    focusArea,
+                    includeComplexity,
+                    includePatterns,
+                });
+                return result;
+            }
+            case 'atlas_debug': {
+                const error = args['error'];
+                const stackTrace = args['stackTrace'];
+                const code = args['code'];
+                const context = args['context'];
+                const language = args['language'];
+                const framework = args['framework'];
+                if (!error && !stackTrace) {
+                    throw new McpError(ErrorCode.InvalidParams, 'Either error or stackTrace is required');
+                }
+                const result = await analyzeError({
+                    error,
+                    stackTrace,
+                    code,
+                    context,
+                    language,
+                    framework,
+                });
+                return result;
+            }
+            case 'atlas_think': {
+                const thought = z.string().parse(args['thought']);
+                const thoughtNumber = z.number().parse(args['thoughtNumber']);
+                const totalThoughts = z.number().parse(args['totalThoughts']);
+                const nextThoughtNeeded = z.boolean().parse(args['nextThoughtNeeded']);
+                // Start session if problemContext is provided
+                const problemContext = args['problemContext'];
+                if (problemContext && thoughtNumber === 1) {
+                    startSession(problemContext);
+                }
+                const result = await processThought({
+                    thought,
+                    thoughtNumber,
+                    totalThoughts,
+                    nextThoughtNeeded,
+                    isRevision: args['isRevision'],
+                    revisesThought: args['revisesThought'],
+                    branchFromThought: args['branchFromThought'],
+                    branchId: args['branchId'],
+                    mergeBranches: args['mergeBranches'],
+                    thoughtType: args['thoughtType'],
+                    confidence: args['confidence'],
+                    hypothesis: args['hypothesis'],
+                    verificationResult: args['verificationResult'],
+                    isDeadEnd: args['isDeadEnd'],
+                    keyInsight: args['keyInsight'],
+                    needsMoreThoughts: args['needsMoreThoughts'],
+                    problemContext,
+                    constraints: args['constraints'],
+                });
+                return result;
+            }
             case 'atlas_providers': {
                 const status = await checkProviders();
                 const provider = await getActiveProvider();

package/dist/mcp.js.map

@@ -1 +1 @@
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package/dist/tools/debug.d.ts

@@ -0,0 +1,101 @@
+/**
+ * Atlas Server - Debugging Assistance Tool
+ *
+ * Intelligent debugging capabilities:
+ * - Error analysis and root cause detection
+ * - Stack trace parsing and explanation
+ * - Fix suggestions with code examples
+ * - Memory leak detection hints
+ * - Performance bottleneck identification
+ * - Common anti-pattern detection
+ */
+export interface DebugRequest {
+    error?: string;
+    stackTrace?: string;
+    code?: string;
+    context?: string;
+    language?: string;
+    framework?: string;
+}
+export interface DebugAnalysis {
+    summary: string;
+    rootCause: RootCause;
+    stackAnalysis?: StackTraceAnalysis;
+    fixes: FixSuggestion[];
+    relatedIssues: RelatedIssue[];
+    preventionTips: string[];
+    resources: Resource[];
+    confidence: number;
+}
+export interface RootCause {
+    type: ErrorType;
+    description: string;
+    location?: CodeLocation;
+    explanation: string;
+    commonScenarios: string[];
+}
+export type ErrorType = 'syntax' | 'type' | 'reference' | 'runtime' | 'async' | 'network' | 'memory' | 'logic' | 'configuration' | 'dependency' | 'permission' | 'unknown';
+export interface CodeLocation {
+    file?: string;
+    line?: number;
+    column?: number;
+    function?: string;
+}
+export interface StackTraceAnalysis {
+    frames: StackFrame[];
+    originatingFrame: StackFrame;
+    callPath: string[];
+    isAsync: boolean;
+    involvedModules: string[];
+}
+export interface StackFrame {
+    function: string;
+    file: string;
+    line: number;
+    column?: number;
+    isUserCode: boolean;
+    isAsync: boolean;
+    context?: string;
+}
+export interface FixSuggestion {
+    title: string;
+    description: string;
+    code?: CodeFix;
+    steps: string[];
+    confidence: number;
+    tradeoffs?: string;
+}
+export interface CodeFix {
+    before: string;
+    after: string;
+    language: string;
+    explanation: string;
+}
+export interface RelatedIssue {
+    title: string;
+    description: string;
+    likelihood: 'high' | 'medium' | 'low';
+    symptoms: string[];
+}
+export interface Resource {
+    title: string;
+    url?: string;
+    type: 'documentation' | 'stackoverflow' | 'article' | 'github';
+    relevance: number;
+}
+export interface DebugResult {
+    analysis: DebugAnalysis;
+    metadata: {
+        language: string;
+        framework?: string;
+        errorType: ErrorType;
+        hasStackTrace: boolean;
+        hasCode: boolean;
+    };
+    generatedAt: string;
+}
+/**
+ * Analyze an error and provide debugging assistance
+ */
+export declare function analyzeError(request: DebugRequest): Promise<DebugResult>;
+//# sourceMappingURL=debug.d.ts.map

package/dist/tools/debug.d.ts.map

@@ -0,0 +1 @@
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