agileflow 3.4.2 → 4.0.0-alpha.1

package/src/core/commands/diagnose.md

@@ -1,404 +0,0 @@
----
-description: System health diagnostics
-phase: post-impl
-argument-hint: "(no arguments)"
-compact_context:
-  priority: high
-  preserve_rules:
-    - "No arguments required - runs full system diagnostics automatically"
-    - "Run 4 validation checks: JSON files, auto-archival, hooks system, file sizes"
-    - "JSON Validation CRITICAL - validate status.json, metadata, settings with jq empty"
-    - "Auto-Archival System - check script executable and hook configuration"
-    - "Hooks System - validate .claude/settings.json structure"
-    - "File Size Analysis - warn if status.json exceeds 100KB"
-    - "Report issues with indicators: ✅ (pass), ❌ (fail), ⚠️ (warn), ℹ️ (info)"
-    - "Exit code 0 (healthy) or 1 (issues found)"
-  state_fields:
-    - total_checks
-    - passed_checks
-    - warning_count
-    - failure_count
----
-
-# diagnose
-
-Run comprehensive AgileFlow system health checks to identify potential issues before they cause failures.
-
-## Prompt
-
-ROLE: System Diagnostician
-
-INPUTS
-(no arguments - runs full system diagnostics)
-
-ACTIONS
-1) Validate all JSON files (status.json, metadata, settings)
-2) Check file structure (docs/, .agileflow/, .claude/)
-3) Verify git state and hooks
-4) Check for common issues (stale stories, invalid references)
-5) Generate health report with recommendations
-
-OBJECTIVE: Validate AgileFlow system health, identify issues, and provide actionable recommendations.
-
-<!-- COMPACT_SUMMARY_START -->
-## Compact Summary
-
-The `diagnose` command runs comprehensive system health checks on your AgileFlow installation:
-
-**What it checks:**
-- JSON file validation (status.json, metadata, settings) using `jq empty`
-- File structure integrity (docs/, .agileflow/, .claude/)
-- Auto-archival system configuration
-- Hooks system setup
-- File size analysis with warnings
-
-**JSON Validation** (using jq):
-- Validates all critical JSON files: `jq empty <file>` check
-- Reports file sizes and warns if status.json exceeds 100KB
-- Distinguishes between critical and optional files
-- Shows detailed error messages for invalid JSON
-
-**Auto-Archival System**:
-- Checks if archive script exists and is executable (`[ -x <script> ]`)
-- Verifies hook configuration in settings.json (jq queries)
-- Reports archival threshold from metadata
-- Identifies missing or misconfigured components
-
-**Hooks System** (parsing required):
-- Validates .claude/settings.json structure (jq parsing)
-- Counts SessionStart, UserPromptSubmit, and Stop hooks
-- Reports configuration issues
-
-**File Size Analysis**:
-- Monitors status.json size with thresholds (50KB warning, 100KB critical)
-- Uses `stat` command to get file sizes
-- Uses `jq '.stories | length'` to count stories
-- Recommends archival when needed
-
-**Diagnostic Checks**:
-1. **JSON File Validation** → Check status.json, metadata, settings validity
-2. **Auto-Archival System** → Verify archive script + hook configuration
-3. **Hooks System** → Validate .claude/settings.json structure
-4. **File Size Analysis** → Check status.json size and story count
-
-**Output Format**:
-- Indicators: ✅ (pass), ❌ (fail), ⚠️ (warning), ℹ️ (info)
-- Shows file sizes in KB and story counts
-- Provides actionable next steps for each issue
-- Exit code 0 (healthy) or 1 (issues found)
-
-**Common Issues Detected**:
-1. Invalid JSON syntax (jq validation failure)
-2. Large status.json files needing archival (>100KB)
-3. Missing critical files (metadata, status.json)
-4. Auto-archival not configured or not executable
-5. Hooks system misconfiguration
-
-**Recommended Actions**:
-- Run after AgileFlow setup to verify installation
-- Run before major operations to catch issues early
-- Run periodically to maintain system health
-- Use exit code in CI/CD pipelines for validation
-
-**Usage**:
-```bash
-/agileflow:diagnose
-```
-
-**No arguments required** - runs full diagnostic suite automatically.
-<!-- COMPACT_SUMMARY_END -->
-
-**Run these diagnostic checks**:
-
-```bash
-#!/bin/bash
-
-echo "🔍 AgileFlow System Diagnostics"
-echo "================================"
-echo ""
-
-# Check 1: Validate all JSON files
-echo "📋 JSON File Validation"
-echo "----------------------"
-
-JSON_FILES=(
-  "docs/00-meta/agileflow-metadata.json"
-  "docs/09-agents/status.json"
-  "docs/09-agents/status-archive.json"
-  ".claude/settings.json"
-)
-
-JSON_ERRORS=0
-
-for FILE in "${JSON_FILES[@]}"; do
-  if [ -f "$FILE" ]; then
-    if jq empty "$FILE" 2>/dev/null; then
-      SIZE=$(stat -f%z "$FILE" 2>/dev/null || stat -c%s "$FILE" 2>/dev/null)
-      SIZE_KB=$((SIZE / 1024))
-      echo "  ✅ $FILE (${SIZE_KB}KB)"
-
-      # Warn if status.json is getting large (>100KB)
-      if [[ "$FILE" == "docs/09-agents/status.json" ]] && [ $SIZE -gt 102400 ]; then
-        echo "     ⚠️  WARNING: status.json is large (${SIZE_KB}KB). Consider running archival."
-        JSON_ERRORS=$((JSON_ERRORS + 1))
-      fi
-    else
-      echo "  ❌ $FILE - INVALID JSON"
-      echo "     Error details:"
-      jq . "$FILE" 2>&1 | head -3 | sed 's/^/     /'
-      JSON_ERRORS=$((JSON_ERRORS + 1))
-    fi
-  else
-    # Only warn for critical files
-    if [[ "$FILE" == "docs/00-meta/agileflow-metadata.json" ]] || [[ "$FILE" == "docs/09-agents/status.json" ]]; then
-      echo "  ❌ $FILE - NOT FOUND (CRITICAL)"
-      JSON_ERRORS=$((JSON_ERRORS + 1))
-    else
-      echo "  ℹ️  $FILE - not found (optional)"
-    fi
-  fi
-done
-
-echo ""
-
-# Check 2: Auto-Archival System
-echo "📦 Auto-Archival System"
-echo "----------------------"
-
-if [ -f scripts/archive-completed-stories.sh ]; then
-  if [ -x scripts/archive-completed-stories.sh ]; then
-    echo "  ✅ Archive script exists and is executable"
-
-    # Check if hooked up
-    if [ -f .claude/settings.json ] && grep -q "archive-completed-stories.sh" .claude/settings.json 2>/dev/null; then
-      echo "  ✅ Auto-archival hook configured"
-
-      # Check threshold
-      if [ -f docs/00-meta/agileflow-metadata.json ]; then
-        THRESHOLD=$(jq -r '.archival.threshold_days // "not set"' docs/00-meta/agileflow-metadata.json 2>/dev/null)
-        echo "  ✅ Archival threshold: $THRESHOLD days"
-      else
-        echo "  ⚠️  Archival threshold not configured in metadata"
-      fi
-    else
-      echo "  ❌ Auto-archival hook NOT configured in .claude/settings.json"
-      JSON_ERRORS=$((JSON_ERRORS + 1))
-    fi
-  else
-    echo "  ⚠️  Archive script exists but is NOT executable"
-    echo "     Fix: chmod +x scripts/archive-completed-stories.sh"
-    JSON_ERRORS=$((JSON_ERRORS + 1))
-  fi
-else
-  echo "  ❌ Archive script NOT found (scripts/archive-completed-stories.sh)"
-  JSON_ERRORS=$((JSON_ERRORS + 1))
-fi
-
-echo ""
-
-# Check 3: Hooks System
-echo "🪝 Hooks System"
-echo "---------------"
-
-if [ -d .claude ] && [ -f .claude/settings.json ]; then
-  if jq empty .claude/settings.json 2>/dev/null; then
-    echo "  ✅ .claude/settings.json is valid JSON"
-
-    # Count hooks
-    SESSION_START_HOOKS=$(jq '.hooks.SessionStart | length' .claude/settings.json 2>/dev/null)
-    USER_PROMPT_HOOKS=$(jq '.hooks.UserPromptSubmit | length' .claude/settings.json 2>/dev/null)
-    STOP_HOOKS=$(jq '.hooks.Stop | length' .claude/settings.json 2>/dev/null)
-
-    echo "  ℹ️  SessionStart hooks: $SESSION_START_HOOKS"
-    echo "  ℹ️  UserPromptSubmit hooks: $USER_PROMPT_HOOKS"
-    echo "  ℹ️  Stop hooks: $STOP_HOOKS"
-  else
-    echo "  ❌ .claude/settings.json is INVALID JSON"
-    JSON_ERRORS=$((JSON_ERRORS + 1))
-  fi
-else
-  echo "  ⚠️  Hooks system not configured"
-fi
-
-echo ""
-
-# Check 4: File Sizes
-echo "📏 File Size Analysis"
-echo "---------------------"
-
-if [ -f docs/09-agents/status.json ]; then
-  STATUS_SIZE=$(stat -f%z docs/09-agents/status.json 2>/dev/null || stat -c%s docs/09-agents/status.json 2>/dev/null)
-  STATUS_KB=$((STATUS_SIZE / 1024))
-  STORY_COUNT=$(jq '.stories | length' docs/09-agents/status.json 2>/dev/null)
-
-  echo "  status.json: ${STATUS_KB}KB ($STORY_COUNT stories)"
-
-  if [ $STATUS_SIZE -gt 102400 ]; then
-    echo "  ⚠️  WARNING: status.json exceeds 100KB"
-    echo "     Recommendation: Run archival to reduce file size"
-    echo "     Command: bash .agileflow/scripts/archive-completed-stories.sh 7"
-  elif [ $STATUS_SIZE -gt 51200 ]; then
-    echo "  ℹ️  status.json is getting large (>50KB)"
-    echo "     Consider running archival soon"
-  else
-    echo "  ✅ status.json size is healthy"
-  fi
-fi
-
-if [ -f docs/09-agents/status-archive.json ]; then
-  ARCHIVE_SIZE=$(stat -f%z docs/09-agents/status-archive.json 2>/dev/null || stat -c%s docs/09-agents/status-archive.json 2>/dev/null)
-  ARCHIVE_KB=$((ARCHIVE_SIZE / 1024))
-  ARCHIVE_COUNT=$(jq '.stories | length' docs/09-agents/status-archive.json 2>/dev/null)
-
-  echo "  status-archive.json: ${ARCHIVE_KB}KB ($ARCHIVE_COUNT stories)"
-fi
-
-echo ""
-
-# Final Summary
-echo "📊 Diagnostic Summary"
-echo "====================="
-
-if [ $JSON_ERRORS -eq 0 ]; then
-  echo "✅ All checks passed! System is healthy."
-  exit 0
-else
-  echo "⚠️  Found $JSON_ERRORS issue(s) that need attention."
-  echo ""
-  echo "Next steps:"
-  echo "1. Fix JSON validation errors using: jq empty <file> to check, then repair manually"
-  echo "2. Add missing files to .gitignore if needed"
-  echo "3. Run archival if status.json is too large: bash .agileflow/scripts/archive-completed-stories.sh"
-  echo "4. Re-run diagnostics after fixes: /agileflow:diagnose"
-  exit 1
-fi
-```
-
-**Output Format**:
-- Show all check results with ✅/❌/⚠️/ℹ️ indicators
-- Display file sizes and story counts
-- Provide actionable recommendations for issues
-- Exit with code 0 if healthy, code 1 if issues found
-
----
-
-## Expected Output
-
-### Healthy System
-
-```
-🔍 AgileFlow System Diagnostics
-================================
-
-📋 JSON File Validation
-----------------------
-  ✅ docs/00-meta/agileflow-metadata.json (2KB)
-  ✅ docs/09-agents/status.json (45KB)
-  ℹ️  docs/09-agents/status-archive.json - not found (optional)
-  ✅ .claude/settings.json (8KB)
-
-📦 Auto-Archival System
-----------------------
-  ✅ Archive script exists and is executable
-  ✅ Auto-archival hook configured
-  ✅ Archival threshold: 7 days
-
-🪝 Hooks System
----------------
-  ✅ .claude/settings.json is valid JSON
-  ℹ️  SessionStart hooks: 3
-  ℹ️  UserPromptSubmit hooks: 1
-  ℹ️  Stop hooks: 0
-
-📏 File Size Analysis
----------------------
-  status.json: 45KB (127 stories)
-  ✅ status.json size is healthy
-
-📊 Diagnostic Summary
-=====================
-✅ All checks passed! System is healthy.
-```
-
-### System with Issues
-
-```
-🔍 AgileFlow System Diagnostics
-================================
-
-📋 JSON File Validation
-----------------------
-  ✅ docs/00-meta/agileflow-metadata.json (2KB)
-  ✅ docs/09-agents/status.json (156KB)
-     ⚠️  WARNING: status.json is large (156KB). Consider running archival.
-  ℹ️  docs/09-agents/status-archive.json - not found (optional)
-  ❌ .claude/settings.json - INVALID JSON
-     Error details:
-     parse error: Invalid numeric literal at line 42, column 15
-
-📦 Auto-Archival System
-----------------------
-  ⚠️  Archive script exists but is NOT executable
-     Fix: chmod +x scripts/archive-completed-stories.sh
-
-🪝 Hooks System
----------------
-  ❌ .claude/settings.json is INVALID JSON
-
-📏 File Size Analysis
----------------------
-  status.json: 156KB (423 stories)
-  ⚠️  WARNING: status.json exceeds 100KB
-     Recommendation: Run archival to reduce file size
-     Command: bash .agileflow/scripts/archive-completed-stories.sh 7
-
-📊 Diagnostic Summary
-=====================
-⚠️  Found 4 issue(s) that need attention.
-
-Next steps:
-1. Fix JSON validation errors using: jq empty <file> to check, then repair manually
-2. Make archive script executable: chmod +x scripts/archive-completed-stories.sh
-3. Run archival: bash .agileflow/scripts/archive-completed-stories.sh
-4. Re-run diagnostics: /agileflow:diagnose
-```
-
-### Missing Critical Files
-
-```
-🔍 AgileFlow System Diagnostics
-================================
-
-📋 JSON File Validation
-----------------------
-  ❌ docs/00-meta/agileflow-metadata.json - NOT FOUND (CRITICAL)
-  ❌ docs/09-agents/status.json - NOT FOUND (CRITICAL)
-  ℹ️  docs/09-agents/status-archive.json - not found (optional)
-  ℹ️  .claude/settings.json - not found (optional)
-
-📦 Auto-Archival System
-----------------------
-  ❌ Archive script NOT found (scripts/archive-completed-stories.sh)
-
-🪝 Hooks System
----------------
-  ⚠️  Hooks system not configured
-
-📊 Diagnostic Summary
-=====================
-⚠️  Found 4 issue(s) that need attention.
-
-Next steps:
-1. Run AgileFlow setup: npx agileflow setup
-2. Verify installation completed successfully
-3. Re-run diagnostics: /agileflow:diagnose
-```
-
----
-
-## Related Commands
-
-- `/agileflow:configure` - Manage AgileFlow features
-- `/agileflow:verify` - Run tests and verify
-- `/agileflow:validate-expertise` - Validate expertise files
-- `/agileflow:help` - Display AgileFlow overview