agentic-flow 1.8.15 → 1.9.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1221) hide show
  1. package/.claude/agents/analysis/code-analyzer.md +1 -1
  2. package/.claude/agents/core/coder.md +57 -2
  3. package/.claude/agents/core/planner.md +53 -1
  4. package/.claude/agents/core/researcher.md +60 -6
  5. package/.claude/agents/core/reviewer.md +55 -1
  6. package/.claude/agents/core/tester.md +54 -1
  7. package/.claude/agents/goal/code-goal-planner.md +446 -0
  8. package/.claude/agents/goal/goal-planner.md +120 -25
  9. package/.claude/agents/hive-mind/collective-intelligence-coordinator.md +130 -0
  10. package/.claude/agents/hive-mind/queen-coordinator.md +203 -0
  11. package/.claude/agents/hive-mind/scout-explorer.md +242 -0
  12. package/.claude/agents/hive-mind/swarm-memory-manager.md +193 -0
  13. package/.claude/agents/hive-mind/worker-specialist.md +217 -0
  14. package/.claude/agents/neural/safla-neural.md +74 -0
  15. package/.claude/agents/reasoning/README.md +452 -0
  16. package/.claude/agents/reasoning/adaptive-learner.md +415 -0
  17. package/.claude/agents/reasoning/context-synthesizer.md +532 -0
  18. package/.claude/agents/reasoning/experience-curator.md +562 -0
  19. package/.claude/agents/reasoning/goal-planner.md +73 -0
  20. package/.claude/agents/reasoning/memory-optimizer.md +579 -0
  21. package/.claude/agents/reasoning/pattern-matcher.md +591 -0
  22. package/.claude/agents/reasoning/reasoning-optimized.md +587 -0
  23. package/.claude/agents/swarm/hierarchical-coordinator.md +75 -4
  24. package/.claude/agents/templates/coordinator-swarm-init.md +19 -4
  25. package/.claude/commands/coordination/README.md +9 -0
  26. package/.claude/commands/coordination/agent-spawn.md +25 -0
  27. package/.claude/commands/coordination/init.md +44 -0
  28. package/.claude/commands/coordination/orchestrate.md +43 -0
  29. package/.claude/commands/coordination/spawn.md +45 -0
  30. package/.claude/commands/coordination/swarm-init.md +85 -0
  31. package/.claude/commands/coordination/task-orchestrate.md +25 -0
  32. package/.claude/commands/hooks/overview.md +84 -10
  33. package/.claude/commands/memory/README.md +9 -0
  34. package/.claude/commands/memory/memory-persist.md +25 -0
  35. package/.claude/commands/memory/memory-search.md +25 -0
  36. package/.claude/commands/memory/memory-usage.md +25 -0
  37. package/.claude/commands/memory/neural.md +47 -0
  38. package/.claude/commands/memory/usage.md +46 -0
  39. package/.claude/settings.json +21 -20
  40. package/.claude/settings.local.json +3 -7
  41. package/.claude/skills/agentdb-advanced/SKILL.md +550 -0
  42. package/.claude/skills/agentdb-learning/SKILL.md +545 -0
  43. package/.claude/skills/agentdb-memory-patterns/SKILL.md +339 -0
  44. package/.claude/skills/agentdb-optimization/SKILL.md +509 -0
  45. package/.claude/skills/agentdb-vector-search/SKILL.md +339 -0
  46. package/.claude/skills/flow-nexus-neural/SKILL.md +738 -0
  47. package/.claude/skills/flow-nexus-platform/SKILL.md +1157 -0
  48. package/.claude/skills/flow-nexus-swarm/SKILL.md +610 -0
  49. package/.claude/skills/github-code-review/SKILL.md +1140 -0
  50. package/.claude/skills/github-multi-repo/SKILL.md +874 -0
  51. package/.claude/skills/github-project-management/SKILL.md +1277 -0
  52. package/.claude/skills/github-release-management/SKILL.md +1081 -0
  53. package/.claude/skills/github-workflow-automation/SKILL.md +1065 -0
  54. package/.claude/skills/hive-mind-advanced/SKILL.md +712 -0
  55. package/.claude/skills/hooks-automation/SKILL.md +1201 -0
  56. package/.claude/skills/pair-programming/SKILL.md +1202 -0
  57. package/.claude/skills/performance-analysis/SKILL.md +563 -0
  58. package/.claude/skills/reasoningbank-agentdb/SKILL.md +446 -0
  59. package/.claude/skills/reasoningbank-intelligence/SKILL.md +201 -0
  60. package/.claude/skills/skill-builder/SKILL.md +910 -0
  61. package/.claude/skills/sparc-methodology/SKILL.md +1115 -0
  62. package/.claude/skills/stream-chain/SKILL.md +563 -0
  63. package/.claude/skills/swarm-advanced/SKILL.md +973 -0
  64. package/.claude/skills/swarm-orchestration/SKILL.md +179 -0
  65. package/.claude/skills/verification-quality/SKILL.md +649 -0
  66. package/.claude/statusline-command.sh +176 -0
  67. package/.claude-flow/metrics/performance.json +87 -0
  68. package/.claude-flow/metrics/system-metrics.json +2138 -0
  69. package/.claude-flow/metrics/task-metrics.json +10 -0
  70. package/.hive-mind/README.md +43 -0
  71. package/.hive-mind/config/queens.json +59 -0
  72. package/.hive-mind/config/workers.json +72 -0
  73. package/.hive-mind/config.json +111 -0
  74. package/.hive-mind/hive.db +0 -0
  75. package/.mcp.json +39 -0
  76. package/.swarm/memory.db +0 -0
  77. package/.swarm/memory.db-shm +0 -0
  78. package/.swarm/memory.db-wal +0 -0
  79. package/CHANGELOG.md +83 -976
  80. package/CLAUDE.md +354 -0
  81. package/README.md +15 -1
  82. package/agentdb.db +0 -0
  83. package/agentic-flow/.agentdb-instructions.md +66 -0
  84. package/agentic-flow/.claude/agents/analysis/code-analyzer.md +209 -0
  85. package/agentic-flow/.claude/agents/analysis/code-review/analyze-code-quality.md +180 -0
  86. package/agentic-flow/.claude/agents/architecture/system-design/arch-system-design.md +156 -0
  87. package/agentic-flow/.claude/agents/base-template-generator.md +42 -0
  88. package/agentic-flow/.claude/agents/consensus/byzantine-coordinator.md +63 -0
  89. package/agentic-flow/.claude/agents/consensus/crdt-synchronizer.md +997 -0
  90. package/agentic-flow/.claude/agents/consensus/gossip-coordinator.md +63 -0
  91. package/agentic-flow/.claude/agents/consensus/performance-benchmarker.md +851 -0
  92. package/agentic-flow/.claude/agents/consensus/quorum-manager.md +823 -0
  93. package/agentic-flow/.claude/agents/consensus/raft-manager.md +63 -0
  94. package/agentic-flow/.claude/agents/consensus/security-manager.md +622 -0
  95. package/agentic-flow/.claude/agents/core/coder.md +211 -0
  96. package/agentic-flow/.claude/agents/core/planner.md +116 -0
  97. package/agentic-flow/.claude/agents/core/researcher.md +136 -0
  98. package/agentic-flow/.claude/agents/core/reviewer.md +272 -0
  99. package/agentic-flow/.claude/agents/core/tester.md +266 -0
  100. package/agentic-flow/.claude/agents/data/ml/data-ml-model.md +193 -0
  101. package/agentic-flow/.claude/agents/development/backend/dev-backend-api.md +142 -0
  102. package/agentic-flow/.claude/agents/devops/ci-cd/ops-cicd-github.md +164 -0
  103. package/agentic-flow/.claude/agents/documentation/api-docs/docs-api-openapi.md +174 -0
  104. package/agentic-flow/.claude/agents/flow-nexus/app-store.md +88 -0
  105. package/agentic-flow/.claude/agents/flow-nexus/authentication.md +69 -0
  106. package/agentic-flow/.claude/agents/flow-nexus/challenges.md +81 -0
  107. package/agentic-flow/.claude/agents/flow-nexus/neural-network.md +88 -0
  108. package/agentic-flow/.claude/agents/flow-nexus/payments.md +83 -0
  109. package/agentic-flow/.claude/agents/flow-nexus/sandbox.md +76 -0
  110. package/agentic-flow/.claude/agents/flow-nexus/swarm.md +76 -0
  111. package/agentic-flow/.claude/agents/flow-nexus/user-tools.md +96 -0
  112. package/agentic-flow/.claude/agents/flow-nexus/workflow.md +84 -0
  113. package/agentic-flow/.claude/agents/github/code-review-swarm.md +538 -0
  114. package/agentic-flow/.claude/agents/github/github-modes.md +173 -0
  115. package/agentic-flow/.claude/agents/github/issue-tracker.md +319 -0
  116. package/agentic-flow/.claude/agents/github/multi-repo-swarm.md +553 -0
  117. package/agentic-flow/.claude/agents/github/pr-manager.md +191 -0
  118. package/agentic-flow/.claude/agents/github/project-board-sync.md +509 -0
  119. package/agentic-flow/.claude/agents/github/release-manager.md +367 -0
  120. package/agentic-flow/.claude/agents/github/release-swarm.md +583 -0
  121. package/agentic-flow/.claude/agents/github/repo-architect.md +398 -0
  122. package/agentic-flow/.claude/agents/github/swarm-issue.md +573 -0
  123. package/agentic-flow/.claude/agents/github/swarm-pr.md +428 -0
  124. package/agentic-flow/.claude/agents/github/sync-coordinator.md +452 -0
  125. package/agentic-flow/.claude/agents/github/workflow-automation.md +635 -0
  126. package/agentic-flow/.claude/agents/goal/agent.md +816 -0
  127. package/agentic-flow/.claude/agents/goal/goal-planner.md +73 -0
  128. package/agentic-flow/.claude/agents/optimization/benchmark-suite.md +665 -0
  129. package/agentic-flow/.claude/agents/optimization/load-balancer.md +431 -0
  130. package/agentic-flow/.claude/agents/optimization/performance-monitor.md +672 -0
  131. package/agentic-flow/.claude/agents/optimization/resource-allocator.md +674 -0
  132. package/agentic-flow/.claude/agents/optimization/topology-optimizer.md +808 -0
  133. package/agentic-flow/.claude/agents/sparc/architecture.md +472 -0
  134. package/agentic-flow/.claude/agents/sparc/pseudocode.md +318 -0
  135. package/agentic-flow/.claude/agents/sparc/refinement.md +525 -0
  136. package/agentic-flow/.claude/agents/sparc/specification.md +276 -0
  137. package/agentic-flow/.claude/agents/specialized/mobile/spec-mobile-react-native.md +226 -0
  138. package/agentic-flow/.claude/agents/swarm/adaptive-coordinator.md +396 -0
  139. package/agentic-flow/.claude/agents/swarm/hierarchical-coordinator.md +256 -0
  140. package/agentic-flow/.claude/agents/swarm/mesh-coordinator.md +392 -0
  141. package/agentic-flow/.claude/agents/templates/automation-smart-agent.md +205 -0
  142. package/agentic-flow/.claude/agents/templates/coordinator-swarm-init.md +90 -0
  143. package/agentic-flow/.claude/agents/templates/github-pr-manager.md +177 -0
  144. package/agentic-flow/.claude/agents/templates/implementer-sparc-coder.md +259 -0
  145. package/agentic-flow/.claude/agents/templates/memory-coordinator.md +187 -0
  146. package/agentic-flow/.claude/agents/templates/migration-plan.md +746 -0
  147. package/agentic-flow/.claude/agents/templates/orchestrator-task.md +139 -0
  148. package/agentic-flow/.claude/agents/templates/performance-analyzer.md +199 -0
  149. package/agentic-flow/.claude/agents/templates/sparc-coordinator.md +183 -0
  150. package/agentic-flow/.claude/agents/testing/unit/tdd-london-swarm.md +244 -0
  151. package/agentic-flow/.claude/agents/testing/validation/production-validator.md +395 -0
  152. package/agentic-flow/.claude/commands/agents/README.md +10 -0
  153. package/agentic-flow/.claude/commands/agents/agent-capabilities.md +21 -0
  154. package/agentic-flow/.claude/commands/agents/agent-coordination.md +28 -0
  155. package/agentic-flow/.claude/commands/agents/agent-spawning.md +28 -0
  156. package/agentic-flow/.claude/commands/agents/agent-types.md +26 -0
  157. package/agentic-flow/.claude/commands/analysis/COMMAND_COMPLIANCE_REPORT.md +54 -0
  158. package/agentic-flow/.claude/commands/analysis/README.md +9 -0
  159. package/agentic-flow/.claude/commands/analysis/bottleneck-detect.md +162 -0
  160. package/agentic-flow/.claude/commands/analysis/performance-bottlenecks.md +59 -0
  161. package/agentic-flow/.claude/commands/analysis/performance-report.md +25 -0
  162. package/agentic-flow/.claude/commands/analysis/token-efficiency.md +45 -0
  163. package/agentic-flow/.claude/commands/analysis/token-usage.md +25 -0
  164. package/agentic-flow/.claude/commands/automation/README.md +9 -0
  165. package/agentic-flow/.claude/commands/automation/auto-agent.md +122 -0
  166. package/agentic-flow/.claude/commands/automation/self-healing.md +106 -0
  167. package/agentic-flow/.claude/commands/automation/session-memory.md +90 -0
  168. package/agentic-flow/.claude/commands/automation/smart-agents.md +73 -0
  169. package/agentic-flow/.claude/commands/automation/smart-spawn.md +25 -0
  170. package/agentic-flow/.claude/commands/automation/workflow-select.md +25 -0
  171. package/agentic-flow/.claude/commands/flow-nexus/app-store.md +124 -0
  172. package/agentic-flow/.claude/commands/flow-nexus/challenges.md +120 -0
  173. package/agentic-flow/.claude/commands/flow-nexus/login-registration.md +65 -0
  174. package/agentic-flow/.claude/commands/flow-nexus/neural-network.md +134 -0
  175. package/agentic-flow/.claude/commands/flow-nexus/payments.md +116 -0
  176. package/agentic-flow/.claude/commands/flow-nexus/sandbox.md +83 -0
  177. package/agentic-flow/.claude/commands/flow-nexus/swarm.md +87 -0
  178. package/agentic-flow/.claude/commands/flow-nexus/user-tools.md +152 -0
  179. package/agentic-flow/.claude/commands/flow-nexus/workflow.md +115 -0
  180. package/agentic-flow/.claude/commands/github/README.md +11 -0
  181. package/agentic-flow/.claude/commands/github/code-review-swarm.md +514 -0
  182. package/agentic-flow/.claude/commands/github/code-review.md +25 -0
  183. package/agentic-flow/.claude/commands/github/github-modes.md +147 -0
  184. package/agentic-flow/.claude/commands/github/github-swarm.md +121 -0
  185. package/agentic-flow/.claude/commands/github/issue-tracker.md +292 -0
  186. package/agentic-flow/.claude/commands/github/issue-triage.md +25 -0
  187. package/agentic-flow/.claude/commands/github/multi-repo-swarm.md +519 -0
  188. package/agentic-flow/.claude/commands/github/pr-enhance.md +26 -0
  189. package/agentic-flow/.claude/commands/github/pr-manager.md +170 -0
  190. package/agentic-flow/.claude/commands/github/project-board-sync.md +471 -0
  191. package/agentic-flow/.claude/commands/github/release-manager.md +338 -0
  192. package/agentic-flow/.claude/commands/github/release-swarm.md +544 -0
  193. package/agentic-flow/.claude/commands/github/repo-analyze.md +25 -0
  194. package/agentic-flow/.claude/commands/github/repo-architect.md +367 -0
  195. package/agentic-flow/.claude/commands/github/swarm-issue.md +482 -0
  196. package/agentic-flow/.claude/commands/github/swarm-pr.md +285 -0
  197. package/agentic-flow/.claude/commands/github/sync-coordinator.md +301 -0
  198. package/agentic-flow/.claude/commands/github/workflow-automation.md +442 -0
  199. package/agentic-flow/.claude/commands/hive-mind/README.md +17 -0
  200. package/agentic-flow/.claude/commands/hive-mind/hive-mind-consensus.md +8 -0
  201. package/agentic-flow/.claude/commands/hive-mind/hive-mind-init.md +18 -0
  202. package/agentic-flow/.claude/commands/hive-mind/hive-mind-memory.md +8 -0
  203. package/agentic-flow/.claude/commands/hive-mind/hive-mind-metrics.md +8 -0
  204. package/agentic-flow/.claude/commands/hive-mind/hive-mind-resume.md +8 -0
  205. package/agentic-flow/.claude/commands/hive-mind/hive-mind-sessions.md +8 -0
  206. package/agentic-flow/.claude/commands/hive-mind/hive-mind-spawn.md +21 -0
  207. package/agentic-flow/.claude/commands/hive-mind/hive-mind-status.md +8 -0
  208. package/agentic-flow/.claude/commands/hive-mind/hive-mind-stop.md +8 -0
  209. package/agentic-flow/.claude/commands/hive-mind/hive-mind-wizard.md +8 -0
  210. package/agentic-flow/.claude/commands/hive-mind/hive-mind.md +27 -0
  211. package/agentic-flow/.claude/commands/hooks/README.md +11 -0
  212. package/agentic-flow/.claude/commands/hooks/overview.md +58 -0
  213. package/agentic-flow/.claude/commands/hooks/post-edit.md +117 -0
  214. package/agentic-flow/.claude/commands/hooks/post-task.md +112 -0
  215. package/agentic-flow/.claude/commands/hooks/pre-edit.md +113 -0
  216. package/agentic-flow/.claude/commands/hooks/pre-task.md +111 -0
  217. package/agentic-flow/.claude/commands/hooks/session-end.md +118 -0
  218. package/agentic-flow/.claude/commands/hooks/setup.md +103 -0
  219. package/agentic-flow/.claude/commands/monitoring/README.md +9 -0
  220. package/agentic-flow/.claude/commands/monitoring/agent-metrics.md +25 -0
  221. package/agentic-flow/.claude/commands/monitoring/agents.md +44 -0
  222. package/agentic-flow/.claude/commands/monitoring/real-time-view.md +25 -0
  223. package/agentic-flow/.claude/commands/monitoring/status.md +46 -0
  224. package/agentic-flow/.claude/commands/monitoring/swarm-monitor.md +25 -0
  225. package/agentic-flow/.claude/commands/optimization/README.md +9 -0
  226. package/agentic-flow/.claude/commands/optimization/auto-topology.md +62 -0
  227. package/agentic-flow/.claude/commands/optimization/cache-manage.md +25 -0
  228. package/agentic-flow/.claude/commands/optimization/parallel-execute.md +25 -0
  229. package/agentic-flow/.claude/commands/optimization/parallel-execution.md +50 -0
  230. package/agentic-flow/.claude/commands/optimization/topology-optimize.md +25 -0
  231. package/agentic-flow/.claude/commands/pair/commands.md +546 -0
  232. package/agentic-flow/.claude/commands/pair/config.md +510 -0
  233. package/agentic-flow/.claude/commands/pair/examples.md +512 -0
  234. package/agentic-flow/.claude/commands/pair/modes.md +348 -0
  235. package/agentic-flow/.claude/commands/pair/session.md +407 -0
  236. package/agentic-flow/.claude/commands/pair/start.md +209 -0
  237. package/agentic-flow/.claude/commands/sparc/analyzer.md +52 -0
  238. package/agentic-flow/.claude/commands/sparc/architect.md +53 -0
  239. package/agentic-flow/.claude/commands/sparc/batch-executor.md +54 -0
  240. package/agentic-flow/.claude/commands/sparc/coder.md +54 -0
  241. package/agentic-flow/.claude/commands/sparc/debugger.md +54 -0
  242. package/agentic-flow/.claude/commands/sparc/designer.md +53 -0
  243. package/agentic-flow/.claude/commands/sparc/documenter.md +54 -0
  244. package/agentic-flow/.claude/commands/sparc/innovator.md +54 -0
  245. package/agentic-flow/.claude/commands/sparc/memory-manager.md +54 -0
  246. package/agentic-flow/.claude/commands/sparc/optimizer.md +54 -0
  247. package/agentic-flow/.claude/commands/sparc/orchestrator.md +132 -0
  248. package/agentic-flow/.claude/commands/sparc/researcher.md +54 -0
  249. package/agentic-flow/.claude/commands/sparc/reviewer.md +54 -0
  250. package/agentic-flow/.claude/commands/sparc/sparc-modes.md +174 -0
  251. package/agentic-flow/.claude/commands/sparc/swarm-coordinator.md +54 -0
  252. package/agentic-flow/.claude/commands/sparc/tdd.md +54 -0
  253. package/agentic-flow/.claude/commands/sparc/tester.md +54 -0
  254. package/agentic-flow/.claude/commands/sparc/workflow-manager.md +54 -0
  255. package/agentic-flow/.claude/commands/stream-chain/pipeline.md +121 -0
  256. package/agentic-flow/.claude/commands/stream-chain/run.md +70 -0
  257. package/agentic-flow/.claude/commands/swarm/README.md +15 -0
  258. package/agentic-flow/.claude/commands/swarm/analysis.md +95 -0
  259. package/agentic-flow/.claude/commands/swarm/development.md +96 -0
  260. package/agentic-flow/.claude/commands/swarm/examples.md +168 -0
  261. package/agentic-flow/.claude/commands/swarm/maintenance.md +102 -0
  262. package/agentic-flow/.claude/commands/swarm/optimization.md +117 -0
  263. package/agentic-flow/.claude/commands/swarm/research.md +136 -0
  264. package/agentic-flow/.claude/commands/swarm/swarm-analysis.md +8 -0
  265. package/agentic-flow/.claude/commands/swarm/swarm-background.md +8 -0
  266. package/agentic-flow/.claude/commands/swarm/swarm-init.md +19 -0
  267. package/agentic-flow/.claude/commands/swarm/swarm-modes.md +8 -0
  268. package/agentic-flow/.claude/commands/swarm/swarm-monitor.md +8 -0
  269. package/agentic-flow/.claude/commands/swarm/swarm-spawn.md +19 -0
  270. package/agentic-flow/.claude/commands/swarm/swarm-status.md +8 -0
  271. package/agentic-flow/.claude/commands/swarm/swarm-strategies.md +8 -0
  272. package/agentic-flow/.claude/commands/swarm/swarm.md +27 -0
  273. package/agentic-flow/.claude/commands/swarm/testing.md +131 -0
  274. package/agentic-flow/.claude/commands/training/README.md +9 -0
  275. package/agentic-flow/.claude/commands/training/model-update.md +25 -0
  276. package/agentic-flow/.claude/commands/training/neural-patterns.md +74 -0
  277. package/agentic-flow/.claude/commands/training/neural-train.md +25 -0
  278. package/agentic-flow/.claude/commands/training/pattern-learn.md +25 -0
  279. package/agentic-flow/.claude/commands/training/specialization.md +63 -0
  280. package/agentic-flow/.claude/commands/truth/start.md +143 -0
  281. package/agentic-flow/.claude/commands/verify/check.md +50 -0
  282. package/agentic-flow/.claude/commands/verify/start.md +128 -0
  283. package/agentic-flow/.claude/commands/workflows/README.md +9 -0
  284. package/agentic-flow/.claude/commands/workflows/development.md +78 -0
  285. package/agentic-flow/.claude/commands/workflows/research.md +63 -0
  286. package/agentic-flow/.claude/commands/workflows/workflow-create.md +25 -0
  287. package/agentic-flow/.claude/commands/workflows/workflow-execute.md +25 -0
  288. package/agentic-flow/.claude/commands/workflows/workflow-export.md +25 -0
  289. package/agentic-flow/.claude/helpers/checkpoint-manager.sh +251 -0
  290. package/agentic-flow/.claude/helpers/github-safe.js +106 -0
  291. package/agentic-flow/.claude/helpers/github-setup.sh +28 -0
  292. package/agentic-flow/.claude/helpers/quick-start.sh +19 -0
  293. package/agentic-flow/.claude/helpers/setup-mcp.sh +18 -0
  294. package/agentic-flow/.claude/helpers/standard-checkpoint-hooks.sh +179 -0
  295. package/agentic-flow/.claude/settings.json +114 -0
  296. package/agentic-flow/.claude/settings.local.json +14 -0
  297. package/agentic-flow/.claude/skills/skill-builder/.claude-flow/metrics/agent-metrics.json +1 -0
  298. package/agentic-flow/AGENT-BOOSTER-STATUS.md +292 -0
  299. package/agentic-flow/CHANGELOG-v1.3.0.md +120 -0
  300. package/agentic-flow/CHANGELOG.md +1023 -0
  301. package/agentic-flow/COMPLETION_REPORT_v1.7.1.md +335 -0
  302. package/agentic-flow/DOCKER-VERIFICATION.md +207 -0
  303. package/agentic-flow/IMPLEMENTATION_SUMMARY_v1.7.1.md +241 -0
  304. package/agentic-flow/NPX_AGENTDB_SETUP.md +175 -0
  305. package/agentic-flow/PUBLISH_GUIDE.md +438 -0
  306. package/agentic-flow/PUBLISH_SUMMARY_v1.7.1.md +198 -0
  307. package/agentic-flow/Python/AddTwoNumbers.py +2 -0
  308. package/agentic-flow/README.md +577 -0
  309. package/agentic-flow/RELEASE_NOTES_v1.7.0.md +297 -0
  310. package/agentic-flow/RELEASE_v1.7.1.md +327 -0
  311. package/agentic-flow/SUPABASE-INTEGRATION-COMPLETE.md +357 -0
  312. package/agentic-flow/TESTING_QUICK_START.md +223 -0
  313. package/agentic-flow/TOOL-EMULATION-INTEGRATION-ISSUE.md +669 -0
  314. package/agentic-flow/VALIDATION_v1.7.1.md +234 -0
  315. package/agentic-flow/add_two_numbers.py +2 -0
  316. package/agentic-flow/agentdb.db +0 -0
  317. package/agentic-flow/agentic-flow/.claude-flow/metrics/agent-metrics.json +1 -0
  318. package/agentic-flow/agentic-flow/.claude-flow/metrics/performance.json +87 -0
  319. package/agentic-flow/agentic-flow/.claude-flow/metrics/task-metrics.json +10 -0
  320. package/agentic-flow/app/app.py +0 -0
  321. package/agentic-flow/config/.mcp.json +22 -0
  322. package/agentic-flow/config/router.config.example.json +224 -0
  323. package/agentic-flow/config/router.config.json +224 -0
  324. package/agentic-flow/deployment/.claude-settings.json +14 -0
  325. package/agentic-flow/docker/claude-agent-sdk/docker/claude-agent-sdk/FASTMCP_SUMMARY.md +369 -0
  326. package/agentic-flow/docker/claude-agent-sdk/docker/claude-agent-sdk/docs/ARCHITECTURE.md +385 -0
  327. package/agentic-flow/docker/claude-agent-sdk/docker/claude-agent-sdk/docs/fastmcp-implementation.md +351 -0
  328. package/agentic-flow/docker/claude-agent-sdk/docker/claude-agent-sdk/docs/fastmcp-quick-start.md +358 -0
  329. package/agentic-flow/docker/claude-agent-sdk/docker/claude-agent-sdk/src/mcp/fastmcp/README.md +340 -0
  330. package/agentic-flow/docker/fastmcp-test.Dockerfile +24 -0
  331. package/agentic-flow/docker/federation-test/.claude-flow/metrics/agent-metrics.json +1 -0
  332. package/agentic-flow/docker/federation-test/.claude-flow/metrics/performance.json +87 -0
  333. package/agentic-flow/docker/federation-test/.claude-flow/metrics/task-metrics.json +10 -0
  334. package/agentic-flow/docker/federation-test/README.md +314 -0
  335. package/agentic-flow/docker/federation-test/run-test.sh +65 -0
  336. package/agentic-flow/docker/federation-test/standalone-agent.js +180 -0
  337. package/agentic-flow/docker/federation-test/standalone-hub.js +85 -0
  338. package/agentic-flow/docker/federation-test/test-published-hub.js +66 -0
  339. package/agentic-flow/docker/test-instance/.claude-flow/metrics/agent-metrics.json +1 -0
  340. package/agentic-flow/docker/test-instance/.claude-flow/metrics/performance.json +87 -0
  341. package/agentic-flow/docker/test-instance/.claude-flow/metrics/task-metrics.json +10 -0
  342. package/agentic-flow/docker/test-instance/.env.example +51 -0
  343. package/agentic-flow/docker/test-instance/COMPREHENSIVE_TEST_RESULTS.md +766 -0
  344. package/agentic-flow/docker/test-instance/DOCKER_VALIDATION_SUMMARY.md +417 -0
  345. package/agentic-flow/docker/test-instance/FIX_VALIDATION_REPORT.md +619 -0
  346. package/agentic-flow/docker/test-instance/INDEX.md +282 -0
  347. package/agentic-flow/docker/test-instance/QUICK_START.md +217 -0
  348. package/agentic-flow/docker/test-instance/README.md +266 -0
  349. package/agentic-flow/docker/test-instance/VALIDATION_REPORT.md +424 -0
  350. package/agentic-flow/docker/test-instance/test-model-config.md +69 -0
  351. package/agentic-flow/docker/test-instance/test-runner.sh +91 -0
  352. package/agentic-flow/docker/test-v1.1.10.dockerfile +12 -0
  353. package/agentic-flow/docker/test-validation.sh +37 -0
  354. package/agentic-flow/docker-test.sh +77 -0
  355. package/agentic-flow/docs/.claude-flow/metrics/agent-metrics.json +1 -0
  356. package/agentic-flow/docs/.claude-flow/metrics/performance.json +87 -0
  357. package/agentic-flow/docs/.claude-flow/metrics/task-metrics.json +10 -0
  358. package/agentic-flow/docs/CLAUDE.md +352 -0
  359. package/agentic-flow/docs/INDEX.md +279 -0
  360. package/agentic-flow/docs/LICENSE +21 -0
  361. package/agentic-flow/docs/architecture/EXECUTIVE_SUMMARY.md +310 -0
  362. package/agentic-flow/docs/architecture/IMPROVEMENT_PLAN.md +11 -0
  363. package/agentic-flow/docs/architecture/INTEGRATION-STATUS.md +290 -0
  364. package/agentic-flow/docs/architecture/MULTI_MODEL_ROUTER_PLAN.md +620 -0
  365. package/agentic-flow/docs/architecture/PACKAGE_STRUCTURE.md +199 -0
  366. package/agentic-flow/docs/architecture/QUIC-IMPLEMENTATION-SUMMARY.md +490 -0
  367. package/agentic-flow/docs/architecture/QUIC-SWARM-INTEGRATION.md +593 -0
  368. package/agentic-flow/docs/architecture/QUICK_WINS.md +333 -0
  369. package/agentic-flow/docs/architecture/README.md +15 -0
  370. package/agentic-flow/docs/architecture/RESEARCH_SUMMARY.md +652 -0
  371. package/agentic-flow/docs/guides/.claude-flow/metrics/agent-metrics.json +1 -0
  372. package/agentic-flow/docs/guides/.claude-flow/metrics/performance.json +9 -0
  373. package/agentic-flow/docs/guides/.claude-flow/metrics/task-metrics.json +10 -0
  374. package/agentic-flow/docs/guides/ADDING-MCP-SERVERS-CLI.md +515 -0
  375. package/agentic-flow/docs/guides/ADDING-MCP-SERVERS.md +642 -0
  376. package/agentic-flow/docs/guides/AGENT-BOOSTER.md +435 -0
  377. package/agentic-flow/docs/guides/ALTERNATIVE_LLM_MODELS.md +524 -0
  378. package/agentic-flow/docs/guides/CLAUDE-CODE-INTEGRATION.md +403 -0
  379. package/agentic-flow/docs/guides/DEPLOYMENT.md +906 -0
  380. package/agentic-flow/docs/guides/DOCKER_AGENT_USAGE.md +352 -0
  381. package/agentic-flow/docs/guides/IMPLEMENTATION_EXAMPLES.md +960 -0
  382. package/agentic-flow/docs/guides/MCP-TOOLS.md +1166 -0
  383. package/agentic-flow/docs/guides/MODEL-ID-MAPPING.md +193 -0
  384. package/agentic-flow/docs/guides/MULTI-MODEL-ROUTER.md +702 -0
  385. package/agentic-flow/docs/guides/NPM-PUBLISH.md +218 -0
  386. package/agentic-flow/docs/guides/ONNX-PROXY-IMPLEMENTATION.md +254 -0
  387. package/agentic-flow/docs/guides/ONNX_CLI_USAGE.md +344 -0
  388. package/agentic-flow/docs/guides/ONNX_OPTIMIZATION_GUIDE.md +665 -0
  389. package/agentic-flow/docs/guides/OPENROUTER_DEPLOYMENT.md +495 -0
  390. package/agentic-flow/docs/guides/PROXY-ARCHITECTURE-AND-EXTENSION.md +708 -0
  391. package/agentic-flow/docs/guides/QUIC-SWARM-QUICKSTART.md +543 -0
  392. package/agentic-flow/docs/guides/README.md +17 -0
  393. package/agentic-flow/docs/guides/REASONINGBANK.md +721 -0
  394. package/agentic-flow/docs/guides/STANDALONE_PROXY_GUIDE.md +437 -0
  395. package/agentic-flow/docs/guides/agent-sdk.md +234 -0
  396. package/agentic-flow/docs/reports/QUIC_PHASE1_COMPLETE.md +409 -0
  397. package/agentic-flow/docs/reports/QUIC_PHASE1_COMPLETION.md +323 -0
  398. package/agentic-flow/docs/reviews/quic-implementation-review.md +1076 -0
  399. package/agentic-flow/docs/router/.claude-flow/metrics/agent-metrics.json +1 -0
  400. package/agentic-flow/docs/router/.claude-flow/metrics/performance.json +9 -0
  401. package/agentic-flow/docs/router/.claude-flow/metrics/task-metrics.json +10 -0
  402. package/agentic-flow/examples/PHASE-2-INTEGRATION-GUIDE.md +380 -0
  403. package/agentic-flow/examples/PHASE-2-TEST-REPORT.md +325 -0
  404. package/agentic-flow/examples/REGRESSION-TEST-RESULTS.md +334 -0
  405. package/agentic-flow/examples/TOOL-EMULATION-ARCHITECTURE.md +473 -0
  406. package/agentic-flow/examples/VALIDATION-SUMMARY.md +323 -0
  407. package/agentic-flow/examples/agentdb-memory-patterns/.claude-flow/metrics/agent-metrics.json +1 -0
  408. package/agentic-flow/examples/agentdb-memory-patterns/.claude-flow/metrics/performance.json +87 -0
  409. package/agentic-flow/examples/agentdb-memory-patterns/.claude-flow/metrics/task-metrics.json +10 -0
  410. package/agentic-flow/examples/crispr-cas13-pipeline/.github/workflows/ci.yml +341 -0
  411. package/agentic-flow/examples/crispr-cas13-pipeline/CONTRIBUTING.md +388 -0
  412. package/agentic-flow/examples/crispr-cas13-pipeline/Cargo.lock +5323 -0
  413. package/agentic-flow/examples/crispr-cas13-pipeline/Cargo.toml +105 -0
  414. package/agentic-flow/examples/crispr-cas13-pipeline/DELIVERABLES.md +140 -0
  415. package/agentic-flow/examples/crispr-cas13-pipeline/LICENSE +32 -0
  416. package/agentic-flow/examples/crispr-cas13-pipeline/PROJECT_SUMMARY.md +515 -0
  417. package/agentic-flow/examples/crispr-cas13-pipeline/PUBLISHING_NOTES.md +171 -0
  418. package/agentic-flow/examples/crispr-cas13-pipeline/PUBLISH_CHECKLIST.md +216 -0
  419. package/agentic-flow/examples/crispr-cas13-pipeline/README.md +591 -0
  420. package/agentic-flow/examples/crispr-cas13-pipeline/TEST_SUITE_SUMMARY.md +318 -0
  421. package/agentic-flow/examples/crispr-cas13-pipeline/benches/alignment_benchmark.rs +207 -0
  422. package/agentic-flow/examples/crispr-cas13-pipeline/benches/api_benchmark.rs +346 -0
  423. package/agentic-flow/examples/crispr-cas13-pipeline/benches/comprehensive_benchmarks.rs +362 -0
  424. package/agentic-flow/examples/crispr-cas13-pipeline/benches/immune_analysis_benchmark.rs +369 -0
  425. package/agentic-flow/examples/crispr-cas13-pipeline/benches/offtarget_prediction_benchmark.rs +291 -0
  426. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/Cargo.toml +23 -0
  427. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/src/bwa.rs +255 -0
  428. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/src/error.rs +34 -0
  429. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/src/lib.rs +136 -0
  430. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/src/quality.rs +287 -0
  431. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/tests/alignment_test.rs +230 -0
  432. package/agentic-flow/examples/crispr-cas13-pipeline/crates/api-service/Cargo.toml +32 -0
  433. package/agentic-flow/examples/crispr-cas13-pipeline/crates/api-service/src/error.rs +38 -0
  434. package/agentic-flow/examples/crispr-cas13-pipeline/crates/api-service/src/main.rs +41 -0
  435. package/agentic-flow/examples/crispr-cas13-pipeline/crates/api-service/src/routes.rs +56 -0
  436. package/agentic-flow/examples/crispr-cas13-pipeline/crates/api-service/tests/api_test.rs +306 -0
  437. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/Cargo.toml +17 -0
  438. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/error.rs +31 -0
  439. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/expression.rs +313 -0
  440. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/lib.rs +27 -0
  441. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/metadata.rs +302 -0
  442. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/sequencing.rs +240 -0
  443. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/targets.rs +281 -0
  444. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/tests/models_test.rs +155 -0
  445. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/Cargo.toml +24 -0
  446. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/src/deseq.rs +265 -0
  447. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/src/error.rs +28 -0
  448. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/src/lib.rs +10 -0
  449. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/src/normalization.rs +173 -0
  450. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/src/pathways.rs +195 -0
  451. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/tests/analysis_test.rs +258 -0
  452. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/Cargo.toml +26 -0
  453. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/src/error.rs +34 -0
  454. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/src/features.rs +272 -0
  455. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/src/lib.rs +72 -0
  456. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/src/ml_model.rs +264 -0
  457. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/src/scoring.rs +292 -0
  458. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/tests/prediction_test.rs +245 -0
  459. package/agentic-flow/examples/crispr-cas13-pipeline/crates/processing-orchestrator/Cargo.toml +26 -0
  460. package/agentic-flow/examples/crispr-cas13-pipeline/crates/processing-orchestrator/src/jobs.rs +27 -0
  461. package/agentic-flow/examples/crispr-cas13-pipeline/crates/processing-orchestrator/src/main.rs +35 -0
  462. package/agentic-flow/examples/crispr-cas13-pipeline/crates/processing-orchestrator/src/scheduler.rs +24 -0
  463. package/agentic-flow/examples/crispr-cas13-pipeline/crates/processing-orchestrator/src/workers.rs +17 -0
  464. package/agentic-flow/examples/crispr-cas13-pipeline/docs/ARCHITECTURAL_DECISIONS.md +429 -0
  465. package/agentic-flow/examples/crispr-cas13-pipeline/docs/ARCHITECTURE.md +2964 -0
  466. package/agentic-flow/examples/crispr-cas13-pipeline/docs/ARCHITECTURE_SUMMARY.md +286 -0
  467. package/agentic-flow/examples/crispr-cas13-pipeline/docs/BENCHMARKS.md +380 -0
  468. package/agentic-flow/examples/crispr-cas13-pipeline/docs/PSEUDOCODE.md +354 -0
  469. package/agentic-flow/examples/crispr-cas13-pipeline/docs/REVIEW_REPORT.md +543 -0
  470. package/agentic-flow/examples/crispr-cas13-pipeline/docs/RIGHTS_PRESERVING_PLATFORM.md +342 -0
  471. package/agentic-flow/examples/crispr-cas13-pipeline/docs/SECURITY_AUDIT.md +756 -0
  472. package/agentic-flow/examples/crispr-cas13-pipeline/docs/SPECIFICATION.md +719 -0
  473. package/agentic-flow/examples/crispr-cas13-pipeline/docs/TESTING_GUIDE.md +575 -0
  474. package/agentic-flow/examples/crispr-cas13-pipeline/docs/algorithms/README.md +121 -0
  475. package/agentic-flow/examples/crispr-cas13-pipeline/docs/algorithms/alignment-module.md +868 -0
  476. package/agentic-flow/examples/crispr-cas13-pipeline/docs/algorithms/expression-module.md +928 -0
  477. package/agentic-flow/examples/crispr-cas13-pipeline/docs/algorithms/offtarget-module.md +1030 -0
  478. package/agentic-flow/examples/crispr-cas13-pipeline/docs/algorithms/reporting-module.md +1135 -0
  479. package/agentic-flow/examples/crispr-cas13-pipeline/docs/api-spec.openapi.yaml +1258 -0
  480. package/agentic-flow/examples/crispr-cas13-pipeline/docs/architecture-diagrams/c4-component.md +240 -0
  481. package/agentic-flow/examples/crispr-cas13-pipeline/docs/architecture-diagrams/c4-container.md +223 -0
  482. package/agentic-flow/examples/crispr-cas13-pipeline/docs/architecture-diagrams/c4-context.md +86 -0
  483. package/agentic-flow/examples/crispr-cas13-pipeline/docs/architecture-diagrams/sequence-diagrams.md +499 -0
  484. package/agentic-flow/examples/crispr-cas13-pipeline/docs/data-layer/schema.sql +363 -0
  485. package/agentic-flow/examples/crispr-cas13-pipeline/docs/data-models.yaml +1639 -0
  486. package/agentic-flow/examples/crispr-cas13-pipeline/docs/database-schemas.sql +731 -0
  487. package/agentic-flow/examples/crispr-cas13-pipeline/docs/deployment/alignment-service.yaml +171 -0
  488. package/agentic-flow/examples/crispr-cas13-pipeline/docs/deployment/api-gateway.yaml +253 -0
  489. package/agentic-flow/examples/crispr-cas13-pipeline/docs/deployment/namespace.yaml +26 -0
  490. package/agentic-flow/examples/crispr-cas13-pipeline/docs/deployment/postgresql.yaml +119 -0
  491. package/agentic-flow/examples/crispr-cas13-pipeline/docs/docker/alignment-service/requirements.txt +18 -0
  492. package/agentic-flow/examples/crispr-cas13-pipeline/docs/docker/diff-expr-service/requirements.txt +19 -0
  493. package/agentic-flow/examples/crispr-cas13-pipeline/docs/docker/off-target-service/requirements.txt +27 -0
  494. package/agentic-flow/examples/crispr-cas13-pipeline/docs/flowcharts/README.md +130 -0
  495. package/agentic-flow/examples/crispr-cas13-pipeline/docs/flowcharts/alignment-flowchart.md +221 -0
  496. package/agentic-flow/examples/crispr-cas13-pipeline/docs/flowcharts/expression-flowchart.md +426 -0
  497. package/agentic-flow/examples/crispr-cas13-pipeline/docs/flowcharts/offtarget-flowchart.md +317 -0
  498. package/agentic-flow/examples/crispr-cas13-pipeline/docs/flowcharts/reporting-flowchart.md +502 -0
  499. package/agentic-flow/examples/crispr-cas13-pipeline/docs/mongodb-collections.json +759 -0
  500. package/agentic-flow/examples/crispr-cas13-pipeline/docs/monitoring/alerts.yml +291 -0
  501. package/agentic-flow/examples/crispr-cas13-pipeline/docs/monitoring/grafana-dashboard-system-overview.json +236 -0
  502. package/agentic-flow/examples/crispr-cas13-pipeline/docs/monitoring/prometheus.yml +213 -0
  503. package/agentic-flow/examples/crispr-cas13-pipeline/docs/security/oauth2-authentication.md +478 -0
  504. package/agentic-flow/examples/crispr-cas13-pipeline/src/api/gateway.rs +257 -0
  505. package/agentic-flow/examples/crispr-cas13-pipeline/src/api/mod.rs +1 -0
  506. package/agentic-flow/examples/crispr-cas13-pipeline/src/audit/logger.rs +345 -0
  507. package/agentic-flow/examples/crispr-cas13-pipeline/src/audit/mod.rs +1 -0
  508. package/agentic-flow/examples/crispr-cas13-pipeline/src/governance/mod.rs +1 -0
  509. package/agentic-flow/examples/crispr-cas13-pipeline/src/governance/policy.rs +339 -0
  510. package/agentic-flow/examples/crispr-cas13-pipeline/src/lib.rs +227 -0
  511. package/agentic-flow/examples/crispr-cas13-pipeline/src/main.rs +114 -0
  512. package/agentic-flow/examples/crispr-cas13-pipeline/src/privacy/differential.rs +303 -0
  513. package/agentic-flow/examples/crispr-cas13-pipeline/src/privacy/mod.rs +1 -0
  514. package/agentic-flow/examples/crispr-cas13-pipeline/src/services/grpc.rs +358 -0
  515. package/agentic-flow/examples/crispr-cas13-pipeline/src/services/mod.rs +1 -0
  516. package/agentic-flow/examples/crispr-cas13-pipeline/tests/README.md +336 -0
  517. package/agentic-flow/examples/crispr-cas13-pipeline/tests/TESTING_SUMMARY.md +386 -0
  518. package/agentic-flow/examples/crispr-cas13-pipeline/tests/TEST_COVERAGE_REPORT.md +347 -0
  519. package/agentic-flow/examples/crispr-cas13-pipeline/tests/fixtures/mod.rs +400 -0
  520. package/agentic-flow/examples/crispr-cas13-pipeline/tests/integration/enhanced_integration_tests.rs +432 -0
  521. package/agentic-flow/examples/crispr-cas13-pipeline/tests/integration_test.rs +340 -0
  522. package/agentic-flow/examples/crispr-cas13-pipeline/tests/load_testing_k6.js +269 -0
  523. package/agentic-flow/examples/crispr-cas13-pipeline/tests/load_testing_locust.py +290 -0
  524. package/agentic-flow/examples/crispr-cas13-pipeline/tests/property/enhanced_property_tests.rs +479 -0
  525. package/agentic-flow/examples/crispr-cas13-pipeline/tests/property_tests.rs +371 -0
  526. package/agentic-flow/examples/crispr-cas13-pipeline/tests/rights_preserving_test.rs +251 -0
  527. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/alignment_tests.rs +307 -0
  528. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/api_service_tests.rs +376 -0
  529. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/data_models_tests.rs +283 -0
  530. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/immune_analyzer_tests.rs +374 -0
  531. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/offtarget_tests.rs +334 -0
  532. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/orchestrator_tests.rs +466 -0
  533. package/agentic-flow/examples/federated-agentdb/README.md +494 -0
  534. package/agentic-flow/memory-backup.json +48 -0
  535. package/agentic-flow/package-lock.json +3974 -0
  536. package/agentic-flow/package.json +182 -0
  537. package/agentic-flow/patches/agentdb-fix-imports.patch +13 -0
  538. package/agentic-flow/path/to/file.py +2 -0
  539. package/agentic-flow/path/to/your/script.py +2 -0
  540. package/agentic-flow/python/calculation.py +1 -0
  541. package/agentic-flow/python/operation.py +1 -0
  542. package/agentic-flow/run-agentdb.sh +8 -0
  543. package/agentic-flow/supabase/.temp/cli-latest +1 -0
  544. package/agentic-flow/supabase/.temp/gotrue-version +1 -0
  545. package/agentic-flow/supabase/.temp/pooler-url +1 -0
  546. package/agentic-flow/supabase/.temp/postgres-version +1 -0
  547. package/agentic-flow/supabase/.temp/project-ref +1 -0
  548. package/agentic-flow/supabase/.temp/rest-version +1 -0
  549. package/agentic-flow/supabase/.temp/storage-migration +1 -0
  550. package/agentic-flow/supabase/.temp/storage-version +1 -0
  551. package/agentic-flow/test-tool-commands.sh +26 -0
  552. package/agentic-llm/DEPLOYMENT_STATUS_UPDATE.md +30 -0
  553. package/agentic-llm/MONITOR_SUMMARY.md +116 -0
  554. package/agentic-llm/benchmarks/DEPLOYMENT_SUMMARY.md +106 -0
  555. package/agentic-llm/benchmarks/benchmark.py +419 -0
  556. package/agentic-llm/benchmarks/comparison/optimization_comparison.json +57 -0
  557. package/agentic-llm/benchmarks/finetune_comparison.py +252 -0
  558. package/agentic-llm/benchmarks/results/.gitkeep +2 -0
  559. package/agentic-llm/benchmarks/results/README.md +59 -0
  560. package/agentic-llm/benchmarks/results/agent-booster-results.json +116 -0
  561. package/agentic-llm/benchmarks/results/morph-baseline-results.json +168 -0
  562. package/agentic-llm/benchmarks/run_comparison.py +246 -0
  563. package/agentic-llm/check-training.sh +27 -0
  564. package/agentic-llm/claude_sdk/integration.py +335 -0
  565. package/agentic-llm/cloudrun/cloud_runner.py +390 -0
  566. package/agentic-llm/cloudrun/deploy.sh +83 -0
  567. package/agentic-llm/cloudrun/entrypoint.sh +10 -0
  568. package/agentic-llm/cloudrun/health_server.py +114 -0
  569. package/agentic-llm/cloudrun/setup-secrets.sh +26 -0
  570. package/agentic-llm/cloudrun/upload_to_huggingface.py +277 -0
  571. package/agentic-llm/configs/training_config.json +71 -0
  572. package/agentic-llm/deployment/DEPLOYMENT_INSTRUCTIONS.md +93 -0
  573. package/agentic-llm/deployment/fly.toml +52 -0
  574. package/agentic-llm/docs/BENCHMARK_OPTIMIZATION_GUIDE.md +435 -0
  575. package/agentic-llm/docs/CLOUD_RUN_DEPLOYMENT.md +368 -0
  576. package/agentic-llm/docs/DEPLOYMENT_GUIDE.md +475 -0
  577. package/agentic-llm/docs/DEPLOYMENT_READY.txt +98 -0
  578. package/agentic-llm/docs/DEPLOYMENT_STATUS.md +389 -0
  579. package/agentic-llm/docs/DEPLOYMENT_SUMMARY.md +358 -0
  580. package/agentic-llm/docs/DEPLOY_STATUS.md +69 -0
  581. package/agentic-llm/docs/FINETUNING_GUIDE.md +483 -0
  582. package/agentic-llm/docs/INDEX.md +43 -0
  583. package/agentic-llm/docs/OPTIMIZATION_RESULTS.md +375 -0
  584. package/agentic-llm/docs/PHI4_FINETUNING_RESEARCH.md +1352 -0
  585. package/agentic-llm/docs/QUICKSTART.md +124 -0
  586. package/agentic-llm/docs/README.md +389 -0
  587. package/agentic-llm/docs/TRAINING_MONITOR.md +77 -0
  588. package/agentic-llm/docs/USAGE_GUIDE.md +499 -0
  589. package/agentic-llm/monitor-loop.sh +52 -0
  590. package/agentic-llm/monitor-training.sh +56 -0
  591. package/agentic-llm/quantization/quantize.py +255 -0
  592. package/agentic-llm/requirements.txt +43 -0
  593. package/agentic-llm/scripts/deploy.sh +120 -0
  594. package/agentic-llm/scripts/run_benchmarks.sh +53 -0
  595. package/agentic-llm/scripts/run_finetuning.sh +90 -0
  596. package/agentic-llm/scripts/test_local.sh +77 -0
  597. package/agentic-llm/training/data/mcp_tools_dataset.json +140 -0
  598. package/agentic-llm/training/finetune_mcp.py +306 -0
  599. package/agentic-llm/training/mcp_dataset.py +395 -0
  600. package/agentic-llm/training/train.py +347 -0
  601. package/agentic-llm/validation/data/mcp_validation_set.json +37 -0
  602. package/agentic-llm/validation/mcp_validator.py +267 -0
  603. package/agentic-llm/validation/validator.py +319 -0
  604. package/bench/.claude-flow/metrics/agent-metrics.json +1 -0
  605. package/bench/.claude-flow/metrics/performance.json +9 -0
  606. package/bench/.claude-flow/metrics/task-metrics.json +10 -0
  607. package/bench/BENCHMARK-GUIDE.md +506 -0
  608. package/bench/BENCHMARK-RESULTS-TEMPLATE.md +253 -0
  609. package/bench/COMPLETION-SUMMARY.md +409 -0
  610. package/bench/README.md +217 -0
  611. package/bench/agents/baseline-agent.js +69 -0
  612. package/bench/agents/baseline-agent.ts +78 -0
  613. package/bench/agents/reasoningbank-agent.js +141 -0
  614. package/bench/agents/reasoningbank-agent.ts +173 -0
  615. package/bench/benchmark.js +244 -0
  616. package/bench/benchmark.ts +309 -0
  617. package/bench/config.json +79 -0
  618. package/bench/lib/metrics.js +163 -0
  619. package/bench/lib/metrics.ts +216 -0
  620. package/bench/lib/report-generator.js +252 -0
  621. package/bench/lib/report-generator.ts +266 -0
  622. package/bench/lib/types.js +4 -0
  623. package/bench/lib/types.ts +117 -0
  624. package/bench/package.json +36 -0
  625. package/bench/run-benchmark.sh +67 -0
  626. package/bench/scenarios/api-design-tasks.js +175 -0
  627. package/bench/scenarios/api-design-tasks.ts +199 -0
  628. package/bench/scenarios/coding-tasks.js +199 -0
  629. package/bench/scenarios/coding-tasks.ts +223 -0
  630. package/bench/scenarios/debugging-tasks.js +216 -0
  631. package/bench/scenarios/debugging-tasks.ts +234 -0
  632. package/bench/scenarios/problem-solving-tasks.js +172 -0
  633. package/bench/scenarios/problem-solving-tasks.ts +196 -0
  634. package/bench/tsconfig.json +26 -0
  635. package/benchmarks/quic-transport.bench.ts +584 -0
  636. package/claude-flow +34 -0
  637. package/crates/agentic-flow-quic/.claude-flow/metrics/agent-metrics.json +1 -0
  638. package/crates/agentic-flow-quic/.claude-flow/metrics/performance.json +87 -0
  639. package/crates/agentic-flow-quic/.claude-flow/metrics/task-metrics.json +10 -0
  640. package/crates/agentic-flow-quic/Cargo.toml +66 -0
  641. package/crates/agentic-flow-quic/IMPLEMENTATION.md +299 -0
  642. package/crates/agentic-flow-quic/README.md +75 -0
  643. package/crates/agentic-flow-quic/benches/quic_bench.rs +229 -0
  644. package/crates/agentic-flow-quic/build.rs +23 -0
  645. package/crates/agentic-flow-quic/src/client.rs +242 -0
  646. package/crates/agentic-flow-quic/src/error.rs +100 -0
  647. package/crates/agentic-flow-quic/src/lib.rs +76 -0
  648. package/crates/agentic-flow-quic/src/server.rs +213 -0
  649. package/crates/agentic-flow-quic/src/types.rs +164 -0
  650. package/crates/agentic-flow-quic/src/wasm.rs +143 -0
  651. package/crates/agentic-flow-quic/src/wasm_stub.rs +61 -0
  652. package/crates/agentic-flow-quic/tests/integration_test.rs +254 -0
  653. package/crates/agentic-flow-quic/wasm-pack-build.sh +17 -0
  654. package/crates/sqlite-vector-core/.claude-flow/metrics/agent-metrics.json +1 -0
  655. package/crates/sqlite-vector-core/.claude-flow/metrics/performance.json +87 -0
  656. package/crates/sqlite-vector-core/.claude-flow/metrics/task-metrics.json +10 -0
  657. package/crates/sqlite-vector-core/Cargo.lock +942 -0
  658. package/crates/sqlite-vector-wasm/.claude-flow/metrics/agent-metrics.json +1 -0
  659. package/crates/sqlite-vector-wasm/.claude-flow/metrics/performance.json +87 -0
  660. package/crates/sqlite-vector-wasm/.claude-flow/metrics/task-metrics.json +10 -0
  661. package/crates/sqlite-vector-wasm/Cargo.lock +499 -0
  662. package/docs/.claude-flow/metrics/performance.json +3 -3
  663. package/docs/.claude-flow/metrics/task-metrics.json +3 -3
  664. package/docs/README.md +85 -0
  665. package/docs/REORGANIZATION_PLAN.md +102 -0
  666. package/docs/REORGANIZATION_SUMMARY.md +183 -0
  667. package/docs/agent-integration-guide.md +483 -0
  668. package/docs/api/mcp-tools/mcp-documentation-review.md +834 -0
  669. package/docs/api/mcp-tools/mcp-tools-architecture.md +1082 -0
  670. package/docs/architecture/FEDERATED-AGENTDB-EPHEMERAL-AGENTS.md +680 -0
  671. package/docs/architecture/FEDERATION-CLI-VALIDATION-REPORT.md +491 -0
  672. package/docs/features/README.md +87 -0
  673. package/docs/features/agent-booster/00-INDEX.md +230 -0
  674. package/docs/features/agent-booster/00-OVERVIEW.md +454 -0
  675. package/docs/features/agent-booster/01-ARCHITECTURE.md +699 -0
  676. package/docs/features/agent-booster/02-INTEGRATION.md +771 -0
  677. package/docs/features/agent-booster/03-BENCHMARKS.md +616 -0
  678. package/docs/features/agent-booster/04-NPM-SDK.md +673 -0
  679. package/docs/features/agent-booster/GITHUB-ISSUE.md +523 -0
  680. package/docs/features/agent-booster/README.md +44 -0
  681. package/docs/features/agentdb/AGENTDB-INTEGRATION-COMPLETE.md +590 -0
  682. package/docs/features/agentdb/AGENTDB-LEARNING-SYSTEMS-REPORT.md +783 -0
  683. package/docs/features/agentdb/AGENTDB-MCP-SECURITY-AUDIT.md +877 -0
  684. package/docs/features/agentdb/AGENTDB_INTEGRATION_PLAN.md +776 -0
  685. package/docs/features/agentdb/CAUSAL_RECALL_SEARCH_IMPLEMENTATION.md +141 -0
  686. package/docs/features/agentdb/CLI_GUIDE.md +826 -0
  687. package/docs/features/agentdb/CORE_TOOLS_6-10_IMPLEMENTATION.md +376 -0
  688. package/docs/features/agentdb/LEARNING_TOOLS_6-10.md +474 -0
  689. package/docs/features/agentdb/MCP_TOOLS_IMPLEMENTATION.md +373 -0
  690. package/docs/features/agentdb/README.md +86 -0
  691. package/docs/features/agentdb/TEST_SUITE_SUMMARY.md +222 -0
  692. package/docs/features/agentdb/VERSION_1.3.0_RELEASE.md +199 -0
  693. package/docs/features/agentdb/WASM-VECTOR-IMPLEMENTATION.md +422 -0
  694. package/docs/features/agentdb/agentdb-code-quality-analysis.md +1050 -0
  695. package/docs/features/agentdb/agentdb-tools-verification.md +498 -0
  696. package/docs/features/federation/FEDERATION-CLI-INTEGRATION.md +494 -0
  697. package/docs/features/federation/FEDERATION-IMPLEMENTATION-SUMMARY.md +546 -0
  698. package/docs/features/federation/FEDERATION-TEST-REPORT.md +504 -0
  699. package/docs/features/federation/README.md +35 -0
  700. package/docs/features/quic/BUILD_INSTRUCTIONS.md +220 -0
  701. package/docs/features/quic/FINAL-VALIDATION.md +336 -0
  702. package/docs/features/quic/IMPLEMENTATION-COMPLETE-SUMMARY.md +349 -0
  703. package/docs/features/quic/IMPLEMENTATION_STATUS.md +234 -0
  704. package/docs/features/quic/PERFORMANCE-VALIDATION.md +282 -0
  705. package/docs/features/quic/QUIC-INTEGRATION-SUMMARY.md +545 -0
  706. package/docs/features/quic/QUIC-INTEGRATION.md +502 -0
  707. package/docs/features/quic/QUIC-README.md +226 -0
  708. package/docs/features/quic/QUIC-STATUS-OLD.md +513 -0
  709. package/docs/features/quic/QUIC-STATUS.md +451 -0
  710. package/docs/features/quic/QUIC-VALIDATION-REPORT.md +370 -0
  711. package/docs/features/quic/QUIC_FINAL_STATUS.md +399 -0
  712. package/docs/features/quic/QUIC_IMPLEMENTATION_SUMMARY.md +607 -0
  713. package/docs/features/quic/README-CONDENSED.md +447 -0
  714. package/docs/features/quic/README.md +79 -0
  715. package/docs/features/quic/README_QUIC_PHASE1.md +117 -0
  716. package/docs/features/quic/WASM-INTEGRATION-COMPLETE.md +382 -0
  717. package/docs/features/quic/quic-research.md +1415 -0
  718. package/docs/features/quic/quic-tutorial.md +485 -0
  719. package/docs/features/reasoningbank/MEMORY_VALIDATION_REPORT.md +417 -0
  720. package/docs/features/reasoningbank/README.md +64 -0
  721. package/docs/features/reasoningbank/REASONING-AGENTS.md +482 -0
  722. package/docs/features/reasoningbank/REASONINGBANK-BENCHMARK-RESULTS.md +166 -0
  723. package/docs/features/reasoningbank/REASONINGBANK-BENCHMARK.md +396 -0
  724. package/docs/features/reasoningbank/REASONINGBANK-CLI-INTEGRATION.md +455 -0
  725. package/docs/features/reasoningbank/REASONINGBANK-DEMO.md +419 -0
  726. package/docs/features/reasoningbank/REASONINGBANK-VALIDATION.md +532 -0
  727. package/docs/features/reasoningbank/REASONINGBANK_ARCHITECTURE.md +663 -0
  728. package/docs/features/reasoningbank/REASONINGBANK_BACKENDS.md +375 -0
  729. package/docs/features/reasoningbank/REASONINGBANK_FIXES.md +455 -0
  730. package/docs/features/reasoningbank/REASONINGBANK_IMPLEMENTATION_STATUS.md +478 -0
  731. package/docs/features/reasoningbank/REASONINGBANK_INTEGRATION_PLAN.md +1059 -0
  732. package/docs/features/reasoningbank/REASONINGBANK_INVESTIGATION.md +380 -0
  733. package/docs/features/router/README.md +38 -0
  734. package/docs/features/router/ROUTER_CONFIG_REFERENCE.md +577 -0
  735. package/docs/features/router/ROUTER_USER_GUIDE.md +865 -0
  736. package/docs/features/router/TOP20_MODELS_MATRIX.md +80 -0
  737. package/docs/guides/MCP-AUTHENTICATION.md +2017 -0
  738. package/docs/guides/MCP-QUICKSTART.md +521 -0
  739. package/docs/guides/MCP-TOOLS.md +1050 -850
  740. package/docs/guides/MCP-TROUBLESHOOTING.md +1602 -0
  741. package/docs/guides/NPM_STATS_GUIDE.md +407 -0
  742. package/docs/parallel-execution-implementation.md +525 -0
  743. package/docs/plans/.claude-flow/metrics/agent-metrics.json +1 -0
  744. package/docs/plans/.claude-flow/metrics/performance.json +87 -0
  745. package/docs/plans/.claude-flow/metrics/task-metrics.json +10 -0
  746. package/docs/releases/archive/GITHUB-ISSUE-ADDENDUM-v1.4.6.md +1529 -0
  747. package/docs/releases/archive/GITHUB-ISSUE-BUILD-FIX.md +756 -0
  748. package/docs/releases/archive/GITHUB-ISSUE-REASONINGBANK-BENCHMARK.md +643 -0
  749. package/docs/releases/archive/GITHUB-ISSUE-v1.4.6.md +1453 -0
  750. package/docs/releases/archive/GITHUB-ISSUE-v1.5.0.md +468 -0
  751. package/docs/releases/archive/HOTFIX-v1.2.1.md +315 -0
  752. package/docs/releases/archive/INTEGRATION-COMPLETE.md +291 -0
  753. package/docs/releases/archive/MIGRATION-STATUS.md +118 -0
  754. package/docs/releases/archive/MIGRATION_v1.7.0.md +299 -0
  755. package/docs/releases/archive/NPM-PUBLISH-GUIDE-v1.2.0.md +440 -0
  756. package/docs/releases/archive/PUBLICATION_REPORT_v1.5.11.md +421 -0
  757. package/docs/releases/archive/PUBLISH-COMPLETE-v1.2.0.md +308 -0
  758. package/docs/releases/archive/README.md +82 -0
  759. package/docs/releases/archive/RELEASE-v1.2.0.md +339 -0
  760. package/docs/releases/archive/VALIDATION_REPORT_v1.7.0.md +418 -0
  761. package/docs/releases/archive/ZERO-BUILD-MIGRATION.md +227 -0
  762. package/docs/releases/archive/github-issue-agentdb-integration.md +379 -0
  763. package/docs/releases/archive/v1.4.6-reasoningbank-release.md +541 -0
  764. package/docs/releases/archive/v1.4.7-bugfix.md +212 -0
  765. package/docs/releases/archive/v1.5.14-QUIC-TRANSPORT.md +201 -0
  766. package/docs/releases/archive/v1.5.9-DOCKER-VERIFICATION.md +263 -0
  767. package/docs/releases/archive/v1.5.9-RELEASE-SUMMARY.md +222 -0
  768. package/docs/swarm-optimization-report.md +626 -0
  769. package/index.html +15 -0
  770. package/memory/agents/README.md +31 -0
  771. package/memory/claude-flow@alpha-data.json +5 -0
  772. package/memory/memory-store.json +69 -0
  773. package/memory/sessions/README.md +32 -0
  774. package/package.json +44 -169
  775. package/src/App.css +5 -0
  776. package/src/App.tsx +15 -0
  777. package/src/components/AgentTypes.tsx +122 -0
  778. package/src/components/CoreComponents.tsx +131 -0
  779. package/src/components/Features.tsx +102 -0
  780. package/src/components/Footer.tsx +159 -0
  781. package/src/components/Hero.tsx +87 -0
  782. package/src/components/PerformanceMetrics.tsx +125 -0
  783. package/src/components/QuickStart.tsx +178 -0
  784. package/src/index.css +87 -0
  785. package/src/main.tsx +10 -0
  786. package/src/pages/LandingPage.tsx +23 -0
  787. package/src/transport/quic.ts +258 -0
  788. package/tailwind.config.ts +79 -0
  789. package/vite.config.ts +20 -0
  790. package/dist/agentdb/tests/frontier-features.test.js +0 -665
  791. package/dist/cli/federation-cli.d.ts +0 -53
  792. package/dist/reasoningbank/config/reasoningbank-types.ts +0 -57
  793. package/validation/docker/Dockerfile.reasoningbank-local +0 -24
  794. package/validation/docker/Dockerfile.reasoningbank-test +0 -21
  795. package/validation/docker/README.md +0 -234
  796. package/validation/docker/docker-compose.yml +0 -29
  797. package/validation/docker/test-reasoningbank-npx.mjs +0 -442
  798. package/validation/docker-e2e-validation.sh +0 -212
  799. package/validation/docker-quic-test.sh +0 -42
  800. package/validation/docker-quic-validation.sh +0 -60
  801. package/validation/quic-deep-validation.ts +0 -304
  802. package/validation/test-quic-integration.ts +0 -243
  803. package/validation/test-quic-wasm.ts +0 -94
  804. package/validation/test-regression.mjs +0 -246
  805. package/validation/test-wasm-e2e.ts +0 -354
  806. package/validation/test-wasm-integration.ts +0 -99
  807. package/wasm/quic/agentic_flow_quic.d.ts +0 -37
  808. package/wasm/quic/agentic_flow_quic_bg.wasm.d.ts +0 -19
  809. package/wasm/reasoningbank/reasoningbank_wasm.d.ts +0 -41
  810. package/wasm/reasoningbank/reasoningbank_wasm_bg.wasm.d.ts +0 -20
  811. /package/.claude/agents/{goal → reasoning}/agent.md +0 -0
  812. /package/{.claude/skills/.claude-flow → .claude-flow}/metrics/agent-metrics.json +0 -0
  813. /package/{.claude → agentic-flow/.claude}/agents/MIGRATION_SUMMARY.md +0 -0
  814. /package/{.claude → agentic-flow/.claude}/agents/README.md +0 -0
  815. /package/{.claude → agentic-flow/.claude}/agents/consensus/README.md +0 -0
  816. /package/{.claude → agentic-flow/.claude}/agents/custom/test-long-runner.md +0 -0
  817. /package/{.claude → agentic-flow/.claude}/agents/optimization/README.md +0 -0
  818. /package/{.claude → agentic-flow/.claude}/agents/payments/agentic-payments.md +0 -0
  819. /package/{.claude → agentic-flow/.claude}/agents/sublinear/consensus-coordinator.md +0 -0
  820. /package/{.claude → agentic-flow/.claude}/agents/sublinear/matrix-optimizer.md +0 -0
  821. /package/{.claude → agentic-flow/.claude}/agents/sublinear/pagerank-analyzer.md +0 -0
  822. /package/{.claude → agentic-flow/.claude}/agents/sublinear/performance-optimizer.md +0 -0
  823. /package/{.claude → agentic-flow/.claude}/agents/sublinear/trading-predictor.md +0 -0
  824. /package/{.claude → agentic-flow/.claude}/agents/swarm/README.md +0 -0
  825. /package/{.claude → agentic-flow/.claude}/agents/test-neural.md +0 -0
  826. /package/{.claude → agentic-flow/.claude}/answer.md +0 -0
  827. /package/{.claude → agentic-flow/.claude}/commands/claude-flow-help.md +0 -0
  828. /package/{.claude → agentic-flow/.claude}/commands/claude-flow-memory.md +0 -0
  829. /package/{.claude → agentic-flow/.claude}/commands/claude-flow-swarm.md +0 -0
  830. /package/{.claude → agentic-flow/.claude}/commands/pair/README.md +0 -0
  831. /package/{.claude → agentic-flow/.claude}/commands/sparc/ask.md +0 -0
  832. /package/{.claude → agentic-flow/.claude}/commands/sparc/code.md +0 -0
  833. /package/{.claude → agentic-flow/.claude}/commands/sparc/debug.md +0 -0
  834. /package/{.claude → agentic-flow/.claude}/commands/sparc/devops.md +0 -0
  835. /package/{.claude → agentic-flow/.claude}/commands/sparc/docs-writer.md +0 -0
  836. /package/{.claude → agentic-flow/.claude}/commands/sparc/integration.md +0 -0
  837. /package/{.claude → agentic-flow/.claude}/commands/sparc/mcp.md +0 -0
  838. /package/{.claude → agentic-flow/.claude}/commands/sparc/post-deployment-monitoring-mode.md +0 -0
  839. /package/{.claude → agentic-flow/.claude}/commands/sparc/refinement-optimization-mode.md +0 -0
  840. /package/{.claude → agentic-flow/.claude}/commands/sparc/security-review.md +0 -0
  841. /package/{.claude → agentic-flow/.claude}/commands/sparc/sparc.md +0 -0
  842. /package/{.claude → agentic-flow/.claude}/commands/sparc/spec-pseudocode.md +0 -0
  843. /package/{.claude → agentic-flow/.claude}/commands/sparc/supabase-admin.md +0 -0
  844. /package/{.claude → agentic-flow/.claude}/commands/sparc/tutorial.md +0 -0
  845. /package/{.claude → agentic-flow/.claude}/commands/sparc.md +0 -0
  846. /package/{.claude → agentic-flow/.claude}/mcp.json +0 -0
  847. /package/{.claude → agentic-flow/.claude}/openrouter-models-research.md +0 -0
  848. /package/{.claude → agentic-flow/.claude}/openrouter-quick-reference.md +0 -0
  849. /package/{.claude → agentic-flow/.claude}/settings-backup.json +0 -0
  850. /package/{.claude → agentic-flow/.claude}/settings-optimized.json +0 -0
  851. /package/{.claude → agentic-flow/.claude}/settings-simple.json +0 -0
  852. /package/{.claude/skills/skill-builder → agentic-flow/.claude/skills}/.claude-flow/metrics/agent-metrics.json +0 -0
  853. /package/{.claude → agentic-flow/.claude}/skills/.claude-flow/metrics/performance.json +0 -0
  854. /package/{.claude → agentic-flow/.claude}/skills/.claude-flow/metrics/task-metrics.json +0 -0
  855. /package/{.claude → agentic-flow/.claude}/skills/skill-builder/.claude-flow/metrics/performance.json +0 -0
  856. /package/{.claude → agentic-flow/.claude}/skills/skill-builder/.claude-flow/metrics/task-metrics.json +0 -0
  857. /package/{dist → agentic-flow/dist}/agentdb/benchmarks/comprehensive-benchmark.js +0 -0
  858. /package/{dist → agentic-flow/dist}/agentdb/benchmarks/frontier-benchmark.js +0 -0
  859. /package/{dist → agentic-flow/dist}/agentdb/benchmarks/reflexion-benchmark.js +0 -0
  860. /package/{dist → agentic-flow/dist}/agentdb/cli/agentdb-cli.js +0 -0
  861. /package/{dist → agentic-flow/dist}/agentdb/controllers/CausalMemoryGraph.js +0 -0
  862. /package/{dist → agentic-flow/dist}/agentdb/controllers/CausalRecall.js +0 -0
  863. /package/{dist → agentic-flow/dist}/agentdb/controllers/EmbeddingService.js +0 -0
  864. /package/{dist → agentic-flow/dist}/agentdb/controllers/ExplainableRecall.js +0 -0
  865. /package/{dist → agentic-flow/dist}/agentdb/controllers/NightlyLearner.js +0 -0
  866. /package/{dist → agentic-flow/dist}/agentdb/controllers/ReflexionMemory.js +0 -0
  867. /package/{dist → agentic-flow/dist}/agentdb/controllers/SkillLibrary.js +0 -0
  868. /package/{dist → agentic-flow/dist}/agentdb/controllers/frontier-index.js +0 -0
  869. /package/{dist → agentic-flow/dist}/agentdb/controllers/index.js +0 -0
  870. /package/{dist → agentic-flow/dist}/agentdb/index.js +0 -0
  871. /package/{dist → agentic-flow/dist}/agentdb/optimizations/BatchOperations.js +0 -0
  872. /package/{dist → agentic-flow/dist}/agentdb/optimizations/QueryOptimizer.js +0 -0
  873. /package/{dist → agentic-flow/dist}/agentdb/optimizations/index.js +0 -0
  874. /package/{dist → agentic-flow/dist}/agents/claudeAgent.js +0 -0
  875. /package/{dist → agentic-flow/dist}/agents/claudeAgentDirect.js +0 -0
  876. /package/{dist → agentic-flow/dist}/agents/claudeFlowAgent.js +0 -0
  877. /package/{dist → agentic-flow/dist}/agents/codeReviewAgent.js +0 -0
  878. /package/{dist → agentic-flow/dist}/agents/dataAgent.js +0 -0
  879. /package/{dist → agentic-flow/dist}/agents/directApiAgent.js +0 -0
  880. /package/{dist → agentic-flow/dist}/agents/webResearchAgent.js +0 -0
  881. /package/{dist → agentic-flow/dist}/cli/agent-manager.js +0 -0
  882. /package/{dist → agentic-flow/dist}/cli/claude-code-wrapper.js +0 -0
  883. /package/{dist → agentic-flow/dist}/cli/config-wizard.js +0 -0
  884. /package/{dist → agentic-flow/dist}/cli/federation-cli.js +0 -0
  885. /package/{dist → agentic-flow/dist}/cli/mcp-manager.js +0 -0
  886. /package/{dist → agentic-flow/dist}/cli/mcp.js +0 -0
  887. /package/{dist → agentic-flow/dist}/cli/skills-manager.js +0 -0
  888. /package/{dist → agentic-flow/dist}/cli/update-message.js +0 -0
  889. /package/{dist → agentic-flow/dist}/cli-proxy.js +0 -0
  890. /package/{dist → agentic-flow/dist}/cli-standalone-proxy.js +0 -0
  891. /package/{dist → agentic-flow/dist}/config/claudeFlow.js +0 -0
  892. /package/{dist → agentic-flow/dist}/config/quic.js +0 -0
  893. /package/{dist → agentic-flow/dist}/config/tools.js +0 -0
  894. /package/{dist → agentic-flow/dist}/examples/multi-agent-orchestration.js +0 -0
  895. /package/{dist → agentic-flow/dist}/examples/use-goal-planner.js +0 -0
  896. /package/{dist → agentic-flow/dist}/federation/EphemeralAgent.js +0 -0
  897. /package/{dist → agentic-flow/dist}/federation/FederationHub.js +0 -0
  898. /package/{dist → agentic-flow/dist}/federation/FederationHubClient.js +0 -0
  899. /package/{dist → agentic-flow/dist}/federation/FederationHubServer.js +0 -0
  900. /package/{dist → agentic-flow/dist}/federation/SecurityManager.js +0 -0
  901. /package/{dist → agentic-flow/dist}/federation/debug/agent-debug-stream.js +0 -0
  902. /package/{dist → agentic-flow/dist}/federation/debug/debug-stream.js +0 -0
  903. /package/{dist → agentic-flow/dist}/federation/index.js +0 -0
  904. /package/{dist → agentic-flow/dist}/federation/integrations/realtime-federation.js +0 -0
  905. /package/{dist → agentic-flow/dist}/federation/integrations/supabase-adapter-debug.js +0 -0
  906. /package/{dist → agentic-flow/dist}/federation/integrations/supabase-adapter.js +0 -0
  907. /package/{dist → agentic-flow/dist}/health.js +0 -0
  908. /package/{dist → agentic-flow/dist}/index.js +0 -0
  909. /package/{dist → agentic-flow/dist}/mcp/claudeFlowSdkServer.js +0 -0
  910. /package/{dist → agentic-flow/dist}/mcp/fastmcp/servers/claude-flow-sdk.js +0 -0
  911. /package/{dist → agentic-flow/dist}/mcp/fastmcp/servers/http-sse.js +0 -0
  912. /package/{dist → agentic-flow/dist}/mcp/fastmcp/servers/http-streaming-updated.js +0 -0
  913. /package/{dist → agentic-flow/dist}/mcp/fastmcp/servers/poc-stdio.js +0 -0
  914. /package/{dist → agentic-flow/dist}/mcp/fastmcp/servers/stdio-full.js +0 -0
  915. /package/{dist → agentic-flow/dist}/mcp/fastmcp/tools/agent/add-agent.js +0 -0
  916. /package/{dist → agentic-flow/dist}/mcp/fastmcp/tools/agent/add-command.js +0 -0
  917. /package/{dist → agentic-flow/dist}/mcp/fastmcp/tools/agent/execute.js +0 -0
  918. /package/{dist → agentic-flow/dist}/mcp/fastmcp/tools/agent/list.js +0 -0
  919. /package/{dist → agentic-flow/dist}/mcp/fastmcp/tools/agent/parallel.js +0 -0
  920. /package/{dist → agentic-flow/dist}/mcp/fastmcp/tools/swarm/init.js +0 -0
  921. /package/{dist → agentic-flow/dist}/mcp/fastmcp/tools/swarm/orchestrate.js +0 -0
  922. /package/{dist → agentic-flow/dist}/mcp/fastmcp/tools/swarm/spawn.js +0 -0
  923. /package/{dist → agentic-flow/dist}/mcp/fastmcp/types/index.js +0 -0
  924. /package/{dist → agentic-flow/dist}/mcp/standalone-stdio.js +0 -0
  925. /package/{dist → agentic-flow/dist}/memory/SharedMemoryPool.js +0 -0
  926. /package/{dist → agentic-flow/dist}/memory/index.js +0 -0
  927. /package/{dist → agentic-flow/dist}/proxy/anthropic-to-gemini.js +0 -0
  928. /package/{dist → agentic-flow/dist}/proxy/anthropic-to-onnx.js +0 -0
  929. /package/{dist → agentic-flow/dist}/proxy/anthropic-to-openrouter.js +0 -0
  930. /package/{dist → agentic-flow/dist}/proxy/anthropic-to-requesty.js +0 -0
  931. /package/{dist → agentic-flow/dist}/proxy/provider-instructions.js +0 -0
  932. /package/{dist → agentic-flow/dist}/proxy/quic-proxy.js +0 -0
  933. /package/{dist → agentic-flow/dist}/proxy/tool-emulation.js +0 -0
  934. /package/{dist → agentic-flow/dist}/reasoningbank/AdvancedMemory.js +0 -0
  935. /package/{dist → agentic-flow/dist}/reasoningbank/HybridBackend.js +0 -0
  936. /package/{dist → agentic-flow/dist}/reasoningbank/agentdb-adapter.js +0 -0
  937. /package/{dist → agentic-flow/dist}/reasoningbank/backend-selector.js +0 -0
  938. /package/{dist → agentic-flow/dist}/reasoningbank/benchmark.js +0 -0
  939. /package/{dist → agentic-flow/dist}/reasoningbank/config/reasoningbank-types.js +0 -0
  940. /package/{dist → agentic-flow/dist}/reasoningbank/config/reasoningbank.yaml +0 -0
  941. /package/{dist → agentic-flow/dist}/reasoningbank/core/consolidate.js +0 -0
  942. /package/{dist → agentic-flow/dist}/reasoningbank/core/database.js +0 -0
  943. /package/{dist → agentic-flow/dist}/reasoningbank/core/distill.js +0 -0
  944. /package/{dist → agentic-flow/dist}/reasoningbank/core/judge.js +0 -0
  945. /package/{dist → agentic-flow/dist}/reasoningbank/core/matts.js +0 -0
  946. /package/{dist → agentic-flow/dist}/reasoningbank/core/memory-engine.js +0 -0
  947. /package/{dist → agentic-flow/dist}/reasoningbank/core/retrieve.js +0 -0
  948. /package/{dist → agentic-flow/dist}/reasoningbank/db/queries.js +0 -0
  949. /package/{dist → agentic-flow/dist}/reasoningbank/db/schema.js +0 -0
  950. /package/{dist → agentic-flow/dist}/reasoningbank/demo-comparison.js +0 -0
  951. /package/{dist → agentic-flow/dist}/reasoningbank/hooks/post-task.js +0 -0
  952. /package/{dist → agentic-flow/dist}/reasoningbank/hooks/pre-task.js +0 -0
  953. /package/{dist → agentic-flow/dist}/reasoningbank/index-new.js +0 -0
  954. /package/{dist → agentic-flow/dist}/reasoningbank/index.js +0 -0
  955. /package/{dist → agentic-flow/dist}/reasoningbank/prompts/distill-failure.json +0 -0
  956. /package/{dist → agentic-flow/dist}/reasoningbank/prompts/distill-success.json +0 -0
  957. /package/{dist → agentic-flow/dist}/reasoningbank/prompts/judge.json +0 -0
  958. /package/{dist → agentic-flow/dist}/reasoningbank/prompts/matts-aggregate.json +0 -0
  959. /package/{dist → agentic-flow/dist}/reasoningbank/test-integration.js +0 -0
  960. /package/{dist → agentic-flow/dist}/reasoningbank/test-retrieval.js +0 -0
  961. /package/{dist → agentic-flow/dist}/reasoningbank/test-validation.js +0 -0
  962. /package/{dist → agentic-flow/dist}/reasoningbank/types/index.js +0 -0
  963. /package/{dist → agentic-flow/dist}/reasoningbank/utils/config.js +0 -0
  964. /package/{dist → agentic-flow/dist}/reasoningbank/utils/embeddings.js +0 -0
  965. /package/{dist → agentic-flow/dist}/reasoningbank/utils/mmr.js +0 -0
  966. /package/{dist → agentic-flow/dist}/reasoningbank/utils/pii-scrubber.js +0 -0
  967. /package/{dist → agentic-flow/dist}/reasoningbank/wasm-adapter.js +0 -0
  968. /package/{dist → agentic-flow/dist}/router/model-mapping.js +0 -0
  969. /package/{dist → agentic-flow/dist}/router/providers/anthropic.js +0 -0
  970. /package/{dist → agentic-flow/dist}/router/providers/gemini.js +0 -0
  971. /package/{dist → agentic-flow/dist}/router/providers/onnx-local-optimized.js +0 -0
  972. /package/{dist → agentic-flow/dist}/router/providers/onnx-local.js +0 -0
  973. /package/{dist → agentic-flow/dist}/router/providers/onnx-phi4.js +0 -0
  974. /package/{dist → agentic-flow/dist}/router/providers/onnx.js +0 -0
  975. /package/{dist → agentic-flow/dist}/router/providers/openrouter.js +0 -0
  976. /package/{dist → agentic-flow/dist}/router/router.js +0 -0
  977. /package/{dist → agentic-flow/dist}/router/test-integration.js +0 -0
  978. /package/{dist → agentic-flow/dist}/router/test-onnx-benchmark.js +0 -0
  979. /package/{dist → agentic-flow/dist}/router/test-onnx-integration.js +0 -0
  980. /package/{dist → agentic-flow/dist}/router/test-onnx-local.js +0 -0
  981. /package/{dist → agentic-flow/dist}/router/test-onnx.js +0 -0
  982. /package/{dist → agentic-flow/dist}/router/test-openrouter.js +0 -0
  983. /package/{dist → agentic-flow/dist}/router/test-phi4.js +0 -0
  984. /package/{dist → agentic-flow/dist}/router/types.js +0 -0
  985. /package/{dist → agentic-flow/dist}/swarm/index.js +0 -0
  986. /package/{dist → agentic-flow/dist}/swarm/quic-coordinator.js +0 -0
  987. /package/{dist → agentic-flow/dist}/swarm/transport-router.js +0 -0
  988. /package/{dist → agentic-flow/dist}/transport/index.js +0 -0
  989. /package/{dist → agentic-flow/dist}/transport/quic-handshake.js +0 -0
  990. /package/{dist → agentic-flow/dist}/transport/quic.js +0 -0
  991. /package/{dist → agentic-flow/dist}/utils/agentBoosterPreprocessor.js +0 -0
  992. /package/{dist → agentic-flow/dist}/utils/agentLoader.js +0 -0
  993. /package/{dist → agentic-flow/dist}/utils/agentdb-runtime-patch.js +0 -0
  994. /package/{dist → agentic-flow/dist}/utils/agentdbCommands.js +0 -0
  995. /package/{dist → agentic-flow/dist}/utils/cli.js +0 -0
  996. /package/{dist → agentic-flow/dist}/utils/logger.js +0 -0
  997. /package/{dist → agentic-flow/dist}/utils/math.js +0 -0
  998. /package/{dist → agentic-flow/dist}/utils/mcpCommands.js +0 -0
  999. /package/{dist → agentic-flow/dist}/utils/model-downloader.js +0 -0
  1000. /package/{dist → agentic-flow/dist}/utils/modelCapabilities.js +0 -0
  1001. /package/{dist → agentic-flow/dist}/utils/modelOptimizer.js +0 -0
  1002. /package/{dist → agentic-flow/dist}/utils/reasoningbankCommands.js +0 -0
  1003. /package/{dist → agentic-flow/dist}/utils/retry.js +0 -0
  1004. /package/{docs → agentic-flow/docs}/AGENTDB_TESTING.md +0 -0
  1005. /package/{docs → agentic-flow/docs}/INTEGRATION-COMPLETE.md +0 -0
  1006. /package/{docs → agentic-flow/docs}/QUIC_FINAL_STATUS.md +0 -0
  1007. /package/{docs → agentic-flow/docs}/README_QUIC_PHASE1.md +0 -0
  1008. /package/{docs → agentic-flow/docs}/TEST-V1.7.8.Dockerfile +0 -0
  1009. /package/{docs → agentic-flow/docs}/TEST-V1.7.9-NODE20.Dockerfile +0 -0
  1010. /package/{docs → agentic-flow/docs}/TEST-V1.7.9.Dockerfile +0 -0
  1011. /package/{docs → agentic-flow/docs}/architecture/FEDERATION-DATA-LIFECYCLE.md +0 -0
  1012. /package/{docs → agentic-flow/docs}/archived/COMPLETE_VALIDATION_SUMMARY.md +0 -0
  1013. /package/{docs → agentic-flow/docs}/archived/DOCKER_MCP_VALIDATION.md +0 -0
  1014. /package/{docs → agentic-flow/docs}/archived/DOCKER_OPENROUTER_VALIDATION.md +0 -0
  1015. /package/{docs → agentic-flow/docs}/archived/FASTMCP_COMPLETE.md +0 -0
  1016. /package/{docs → agentic-flow/docs}/archived/FASTMCP_INTEGRATION_STATUS.md +0 -0
  1017. /package/{docs → agentic-flow/docs}/archived/FINAL_SDK_VALIDATION.md +0 -0
  1018. /package/{docs → agentic-flow/docs}/archived/FINAL_SYSTEM_VALIDATION.md +0 -0
  1019. /package/{docs → agentic-flow/docs}/archived/FINAL_VALIDATION_SUMMARY.md +0 -0
  1020. /package/{docs → agentic-flow/docs}/archived/FIXES-APPLIED-STATUS.md +0 -0
  1021. /package/{docs → agentic-flow/docs}/archived/FLOW-NEXUS-COMPLETE.md +0 -0
  1022. /package/{docs → agentic-flow/docs}/archived/HOTFIX_1.1.7.md +0 -0
  1023. /package/{docs → agentic-flow/docs}/archived/INTEGRATION_CONFIRMED.md +0 -0
  1024. /package/{docs → agentic-flow/docs}/archived/MCP_CLI_TOOLS_VALIDATION.md +0 -0
  1025. /package/{docs → agentic-flow/docs}/archived/MCP_INTEGRATION_SUCCESS.md +0 -0
  1026. /package/{docs → agentic-flow/docs}/archived/MCP_PROXY_VALIDATION.md +0 -0
  1027. /package/{docs → agentic-flow/docs}/archived/MODEL_VALIDATION_REPORT.md +0 -0
  1028. /package/{docs → agentic-flow/docs}/archived/ONNX_ENV_VARS.md +0 -0
  1029. /package/{docs → agentic-flow/docs}/archived/ONNX_FINAL_REPORT.md +0 -0
  1030. /package/{docs → agentic-flow/docs}/archived/ONNX_IMPLEMENTATION_COMPLETE.md +0 -0
  1031. /package/{docs → agentic-flow/docs}/archived/ONNX_IMPLEMENTATION_SUMMARY.md +0 -0
  1032. /package/{docs → agentic-flow/docs}/archived/ONNX_INTEGRATION.md +0 -0
  1033. /package/{docs → agentic-flow/docs}/archived/ONNX_OPTIMIZATION_SUMMARY.md +0 -0
  1034. /package/{docs → agentic-flow/docs}/archived/ONNX_PHI4_RESEARCH.md +0 -0
  1035. /package/{docs → agentic-flow/docs}/archived/ONNX_RUNTIME_INTEGRATION_PLAN.md +0 -0
  1036. /package/{docs → agentic-flow/docs}/archived/ONNX_SUCCESS_REPORT.md +0 -0
  1037. /package/{docs → agentic-flow/docs}/archived/ONNX_VS_CLAUDE_QUALITY.md +0 -0
  1038. /package/{docs → agentic-flow/docs}/archived/OPENROUTER-FIX-VALIDATION.md +0 -0
  1039. /package/{docs → agentic-flow/docs}/archived/OPENROUTER-SUCCESS-REPORT.md +0 -0
  1040. /package/{docs → agentic-flow/docs}/archived/OPENROUTER_ISSUES_AND_FIXES.md +0 -0
  1041. /package/{docs → agentic-flow/docs}/archived/OPENROUTER_PROXY_COMPLETE.md +0 -0
  1042. /package/{docs → agentic-flow/docs}/archived/OPENROUTER_VALIDATION_COMPLETE.md +0 -0
  1043. /package/{docs → agentic-flow/docs}/archived/OPTIMIZATION_SUMMARY.md +0 -0
  1044. /package/{docs → agentic-flow/docs}/archived/PACKAGE-COMPLETE.md +0 -0
  1045. /package/{docs → agentic-flow/docs}/archived/PHI4_HYPEROPTIMIZATION_PLAN.md +0 -0
  1046. /package/{docs → agentic-flow/docs}/archived/PROVIDER_INSTRUCTION_OPTIMIZATION.md +0 -0
  1047. /package/{docs → agentic-flow/docs}/archived/PROXY_VALIDATION.md +0 -0
  1048. /package/{docs → agentic-flow/docs}/archived/README.md +0 -0
  1049. /package/{docs → agentic-flow/docs}/archived/README_SDK_VALIDATION.md +0 -0
  1050. /package/{docs → agentic-flow/docs}/archived/README_V1.1.11.md +0 -0
  1051. /package/{docs → agentic-flow/docs}/archived/RELEASE-NOTES-v1.1.13.md +0 -0
  1052. /package/{docs → agentic-flow/docs}/archived/RELEASE-SUMMARY-v1.1.14-beta.1.md +0 -0
  1053. /package/{docs → agentic-flow/docs}/archived/RESEARCH_COMPLETE.txt +0 -0
  1054. /package/{docs → agentic-flow/docs}/archived/ROUTER_VALIDATION.md +0 -0
  1055. /package/{docs → agentic-flow/docs}/archived/SDK-SETUP-COMPLETE.md +0 -0
  1056. /package/{docs → agentic-flow/docs}/archived/SDK_INTEGRATION_COMPLETE.md +0 -0
  1057. /package/{docs → agentic-flow/docs}/archived/TOOL_INSTRUCTION_ENHANCEMENT.md +0 -0
  1058. /package/{docs → agentic-flow/docs}/archived/V1.1.10_VALIDATION.md +0 -0
  1059. /package/{docs → agentic-flow/docs}/archived/V1.1.11_COMPLETE_VALIDATION.md +0 -0
  1060. /package/{docs → agentic-flow/docs}/archived/V1.1.11_MCP_PROXY_FIX.md +0 -0
  1061. /package/{docs → agentic-flow/docs}/archived/V1.1.14-BETA-READY.md +0 -0
  1062. /package/{docs → agentic-flow/docs}/archived/VALIDATION-RESULTS.md +0 -0
  1063. /package/{docs → agentic-flow/docs}/archived/VALIDATION_COMPLETE.md +0 -0
  1064. /package/{docs → agentic-flow/docs}/archived/VALIDATION_SUMMARY.md +0 -0
  1065. /package/{docs → agentic-flow/docs}/archived/claude-flow-integration.md +0 -0
  1066. /package/{docs → agentic-flow/docs}/archived/docker-cli-validation.md +0 -0
  1067. /package/{docs → agentic-flow/docs}/archived/docker-memory-coordination-status.md +0 -0
  1068. /package/{docs → agentic-flow/docs}/archived/mcp-validation-summary.md +0 -0
  1069. /package/{docs → agentic-flow/docs}/archived/quick-wins-validation.md +0 -0
  1070. /package/{docs → agentic-flow/docs}/benchmarks/optimization-guide.md +0 -0
  1071. /package/{docs → agentic-flow/docs}/benchmarks/quic-results.md +0 -0
  1072. /package/{docs → agentic-flow/docs}/federation/AGENT-DEBUG-STREAMING.md +0 -0
  1073. /package/{docs → agentic-flow/docs}/federation/DEBUG-STREAMING-COMPLETE.md +0 -0
  1074. /package/{docs → agentic-flow/docs}/federation/DEBUG-STREAMING.md +0 -0
  1075. /package/{docs → agentic-flow/docs}/federation/DEPLOYMENT-VALIDATION-SUCCESS.md +0 -0
  1076. /package/{docs → agentic-flow/docs}/federation/DOCKER-FEDERATION-DEEP-REVIEW.md +0 -0
  1077. /package/{docs → agentic-flow/docs}/integration-docs/AGENT-BOOSTER-INTEGRATION.md +0 -0
  1078. /package/{docs → agentic-flow/docs}/integration-docs/CLAUDE-FLOW-INTEGRATION-ANALYSIS.md +0 -0
  1079. /package/{docs → agentic-flow/docs}/integration-docs/CLI-INTEGRATION-COMPLETE.md +0 -0
  1080. /package/{docs → agentic-flow/docs}/integration-docs/IMPLEMENTATION_SUMMARY.md +0 -0
  1081. /package/{docs → agentic-flow/docs}/integration-docs/INTEGRATION-QUICK-SUMMARY.md +0 -0
  1082. /package/{docs → agentic-flow/docs}/integration-docs/INTEGRATION-STATUS-CORRECTED.md +0 -0
  1083. /package/{docs → agentic-flow/docs}/integration-docs/INTEGRATION_COMPLETE_SUMMARY.md +0 -0
  1084. /package/{docs → agentic-flow/docs}/integration-docs/QUIC-WASM-INTEGRATION.md +0 -0
  1085. /package/{docs → agentic-flow/docs}/integration-docs/README.md +0 -0
  1086. /package/{docs → agentic-flow/docs}/integration-docs/WASM_ESM_FIX.md +0 -0
  1087. /package/{docs → agentic-flow/docs}/integration-docs/WASM_INTEGRATION_COMPLETE.md +0 -0
  1088. /package/{docs → agentic-flow/docs}/integrations/CLAUDE_AGENTS_INTEGRATION.md +0 -0
  1089. /package/{docs → agentic-flow/docs}/integrations/CLAUDE_FLOW_INTEGRATION.md +0 -0
  1090. /package/{docs → agentic-flow/docs}/integrations/FASTMCP_CLI_INTEGRATION.md +0 -0
  1091. /package/{docs → agentic-flow/docs}/integrations/FLOW-NEXUS-INTEGRATION.md +0 -0
  1092. /package/{docs → agentic-flow/docs}/integrations/README.md +0 -0
  1093. /package/{docs → agentic-flow/docs}/integrations/fastmcp-implementation-plan.md +0 -0
  1094. /package/{docs → agentic-flow/docs}/integrations/fastmcp-poc-integration.md +0 -0
  1095. /package/{docs → agentic-flow/docs}/issues/ISSUE-SUPABASE-INTEGRATION.md +0 -0
  1096. /package/{docs → agentic-flow/docs}/mcp-validation/IMPLEMENTATION-SUMMARY.md +0 -0
  1097. /package/{docs → agentic-flow/docs}/mcp-validation/MCP-CLI-VALIDATION-REPORT.md +0 -0
  1098. /package/{docs → agentic-flow/docs}/mcp-validation/README.md +0 -0
  1099. /package/{docs → agentic-flow/docs}/mcp-validation/strange-loops-test.md +0 -0
  1100. /package/{docs → agentic-flow/docs}/plans/QUIC/BUILD_INSTRUCTIONS.md +0 -0
  1101. /package/{docs → agentic-flow/docs}/plans/QUIC/IMPLEMENTATION_STATUS.md +0 -0
  1102. /package/{docs → agentic-flow/docs}/plans/QUIC/QUIC-INTEGRATION-SUMMARY.md +0 -0
  1103. /package/{docs → agentic-flow/docs}/plans/QUIC/QUIC-INTEGRATION.md +0 -0
  1104. /package/{docs → agentic-flow/docs}/plans/QUIC/QUIC-README.md +0 -0
  1105. /package/{docs → agentic-flow/docs}/plans/QUIC/QUIC_IMPLEMENTATION_SUMMARY.md +0 -0
  1106. /package/{docs → agentic-flow/docs}/plans/QUIC/README-CONDENSED.md +0 -0
  1107. /package/{docs → agentic-flow/docs}/plans/QUIC/quic-research.md +0 -0
  1108. /package/{docs → agentic-flow/docs}/plans/QUIC/quic-tutorial.md +0 -0
  1109. /package/{docs → agentic-flow/docs}/plans/agent-booster/00-INDEX.md +0 -0
  1110. /package/{docs → agentic-flow/docs}/plans/agent-booster/00-OVERVIEW.md +0 -0
  1111. /package/{docs → agentic-flow/docs}/plans/agent-booster/01-ARCHITECTURE.md +0 -0
  1112. /package/{docs → agentic-flow/docs}/plans/agent-booster/02-INTEGRATION.md +0 -0
  1113. /package/{docs → agentic-flow/docs}/plans/agent-booster/03-BENCHMARKS.md +0 -0
  1114. /package/{docs → agentic-flow/docs}/plans/agent-booster/04-NPM-SDK.md +0 -0
  1115. /package/{docs → agentic-flow/docs}/plans/agent-booster/GITHUB-ISSUE.md +0 -0
  1116. /package/{docs → agentic-flow/docs}/plans/agent-booster/README.md +0 -0
  1117. /package/{docs → agentic-flow/docs}/plans/agent-booster-cli-integration.md +0 -0
  1118. /package/{docs → agentic-flow/docs}/plans/requesty/00-overview.md +0 -0
  1119. /package/{docs → agentic-flow/docs}/plans/requesty/01-api-research.md +0 -0
  1120. /package/{docs → agentic-flow/docs}/plans/requesty/02-architecture.md +0 -0
  1121. /package/{docs → agentic-flow/docs}/plans/requesty/03-implementation-phases.md +0 -0
  1122. /package/{docs → agentic-flow/docs}/plans/requesty/04-testing-strategy.md +0 -0
  1123. /package/{docs → agentic-flow/docs}/plans/requesty/05-migration-guide.md +0 -0
  1124. /package/{docs → agentic-flow/docs}/plans/requesty/README.md +0 -0
  1125. /package/{docs → agentic-flow/docs}/quantum-goap/DEPENDENCY_GRAPH.mermaid +0 -0
  1126. /package/{docs → agentic-flow/docs}/quantum-goap/EXECUTION_SUMMARY.md +0 -0
  1127. /package/{docs → agentic-flow/docs}/quantum-goap/GOAP_IMPLEMENTATION_PLAN.md +0 -0
  1128. /package/{docs → agentic-flow/docs}/quantum-goap/QUICK_START.md +0 -0
  1129. /package/{docs → agentic-flow/docs}/quantum-research/QUANTUM_RESEARCH_LITERATURE_REVIEW.md +0 -0
  1130. /package/{docs → agentic-flow/docs}/quantum-research/README.md +0 -0
  1131. /package/{docs → agentic-flow/docs}/quic/FINAL-VALIDATION.md +0 -0
  1132. /package/{docs → agentic-flow/docs}/quic/IMPLEMENTATION-COMPLETE-SUMMARY.md +0 -0
  1133. /package/{docs → agentic-flow/docs}/quic/PERFORMANCE-VALIDATION.md +0 -0
  1134. /package/{docs → agentic-flow/docs}/quic/QUIC-STATUS-OLD.md +0 -0
  1135. /package/{docs → agentic-flow/docs}/quic/QUIC-STATUS.md +0 -0
  1136. /package/{docs → agentic-flow/docs}/quic/QUIC-VALIDATION-REPORT.md +0 -0
  1137. /package/{docs → agentic-flow/docs}/quic/WASM-INTEGRATION-COMPLETE.md +0 -0
  1138. /package/{docs → agentic-flow/docs}/reasoningbank/MEMORY_VALIDATION_REPORT.md +0 -0
  1139. /package/{docs → agentic-flow/docs}/reasoningbank/README.md +0 -0
  1140. /package/{docs → agentic-flow/docs}/reasoningbank/REASONING-AGENTS.md +0 -0
  1141. /package/{docs → agentic-flow/docs}/reasoningbank/REASONINGBANK-BENCHMARK-RESULTS.md +0 -0
  1142. /package/{docs → agentic-flow/docs}/reasoningbank/REASONINGBANK-BENCHMARK.md +0 -0
  1143. /package/{docs → agentic-flow/docs}/reasoningbank/REASONINGBANK-CLI-INTEGRATION.md +0 -0
  1144. /package/{docs → agentic-flow/docs}/reasoningbank/REASONINGBANK-DEMO.md +0 -0
  1145. /package/{docs → agentic-flow/docs}/reasoningbank/REASONINGBANK-VALIDATION.md +0 -0
  1146. /package/{docs → agentic-flow/docs}/reasoningbank/REASONINGBANK_ARCHITECTURE.md +0 -0
  1147. /package/{docs → agentic-flow/docs}/reasoningbank/REASONINGBANK_BACKENDS.md +0 -0
  1148. /package/{docs → agentic-flow/docs}/reasoningbank/REASONINGBANK_FIXES.md +0 -0
  1149. /package/{docs → agentic-flow/docs}/reasoningbank/REASONINGBANK_IMPLEMENTATION_STATUS.md +0 -0
  1150. /package/{docs → agentic-flow/docs}/reasoningbank/REASONINGBANK_INTEGRATION_PLAN.md +0 -0
  1151. /package/{docs → agentic-flow/docs}/reasoningbank/REASONINGBANK_INVESTIGATION.md +0 -0
  1152. /package/{docs → agentic-flow/docs}/releases/GITHUB-ISSUE-ADDENDUM-v1.4.6.md +0 -0
  1153. /package/{docs → agentic-flow/docs}/releases/GITHUB-ISSUE-REASONINGBANK-BENCHMARK.md +0 -0
  1154. /package/{docs → agentic-flow/docs}/releases/GITHUB-ISSUE-v1.4.6.md +0 -0
  1155. /package/{docs → agentic-flow/docs}/releases/GITHUB-ISSUE-v1.5.0.md +0 -0
  1156. /package/{docs → agentic-flow/docs}/releases/HOTFIX-v1.2.1.md +0 -0
  1157. /package/{docs → agentic-flow/docs}/releases/NPM-PUBLISH-GUIDE-v1.2.0.md +0 -0
  1158. /package/{docs → agentic-flow/docs}/releases/PUBLISH-COMPLETE-v1.2.0.md +0 -0
  1159. /package/{docs → agentic-flow/docs}/releases/README.md +0 -0
  1160. /package/{docs → agentic-flow/docs}/releases/RELEASE-v1.2.0.md +0 -0
  1161. /package/{docs → agentic-flow/docs}/releases/RELEASE-v1.8.13.md +0 -0
  1162. /package/{docs → agentic-flow/docs}/releases/v1.4.6-reasoningbank-release.md +0 -0
  1163. /package/{docs → agentic-flow/docs}/releases/v1.4.7-bugfix.md +0 -0
  1164. /package/{docs → agentic-flow/docs}/releases/v1.5.14-QUIC-TRANSPORT.md +0 -0
  1165. /package/{docs → agentic-flow/docs}/router/README.md +0 -0
  1166. /package/{docs → agentic-flow/docs}/router/ROUTER_CONFIG_REFERENCE.md +0 -0
  1167. /package/{docs → agentic-flow/docs}/router/ROUTER_USER_GUIDE.md +0 -0
  1168. /package/{docs → agentic-flow/docs}/router/TOP20_MODELS_MATRIX.md +0 -0
  1169. /package/{docs → agentic-flow/docs}/supabase/IMPLEMENTATION-SUMMARY.md +0 -0
  1170. /package/{docs → agentic-flow/docs}/supabase/INDEX.md +0 -0
  1171. /package/{docs → agentic-flow/docs}/supabase/QUICKSTART.md +0 -0
  1172. /package/{docs → agentic-flow/docs}/supabase/README.md +0 -0
  1173. /package/{docs → agentic-flow/docs}/supabase/SUPABASE-REALTIME-FEDERATION.md +0 -0
  1174. /package/{docs → agentic-flow/docs}/supabase/TEST-REPORT.md +0 -0
  1175. /package/{docs → agentic-flow/docs}/supabase/migrations/001_create_federation_tables.sql +0 -0
  1176. /package/{docs → agentic-flow/docs}/testing/AGENT-SYSTEM-VALIDATION.md +0 -0
  1177. /package/{docs → agentic-flow/docs}/testing/FINAL-TESTING-SUMMARY.md +0 -0
  1178. /package/{docs → agentic-flow/docs}/testing/README.md +0 -0
  1179. /package/{docs → agentic-flow/docs}/testing/REGRESSION-TEST-RESULTS.md +0 -0
  1180. /package/{docs → agentic-flow/docs}/testing/STREAMING-AND-MCP-VALIDATION.md +0 -0
  1181. /package/{docs → agentic-flow/docs}/v1.7.1-QUICK-START.md +0 -0
  1182. /package/{docs → agentic-flow/docs}/validation/README.md +0 -0
  1183. /package/{docs → agentic-flow/docs}/validation/reports/REGRESSION-TEST-V1.8.11.md +0 -0
  1184. /package/{docs → agentic-flow/docs}/validation-reports/BENCHMARK_AND_OPTIMIZATION_REPORT.md +0 -0
  1185. /package/{docs → agentic-flow/docs}/validation-reports/DOCKER_VALIDATION_RESULTS.md +0 -0
  1186. /package/{docs → agentic-flow/docs}/validation-reports/NO_REGRESSIONS_CONFIRMED.md +0 -0
  1187. /package/{docs → agentic-flow/docs}/validation-reports/NPM-PACKAGE-ANALYSIS-FINAL.md +0 -0
  1188. /package/{docs → agentic-flow/docs}/validation-reports/README.md +0 -0
  1189. /package/{docs → agentic-flow/docs}/validation-reports/V2.7.0-ALPHA.10_FINAL_VALIDATION.md +0 -0
  1190. /package/{docs → agentic-flow/docs}/validation-reports/V2.7.0-ALPHA.9_VALIDATION.md +0 -0
  1191. /package/{docs → agentic-flow/docs}/validation-reports/v1.6.0-QUIC-CLI-VALIDATION.md +0 -0
  1192. /package/{docs → agentic-flow/docs}/validation-reports/v1.6.1-NPM-PUBLISH-VALIDATION.md +0 -0
  1193. /package/{docs → agentic-flow/docs}/version-releases/PUBLICATION_REPORT_v1.5.11.md +0 -0
  1194. /package/{docs → agentic-flow/docs}/version-releases/README.md +0 -0
  1195. /package/{docs → agentic-flow/docs}/version-releases/v1.5.9-DOCKER-VERIFICATION.md +0 -0
  1196. /package/{docs → agentic-flow/docs}/version-releases/v1.5.9-RELEASE-SUMMARY.md +0 -0
  1197. /package/{scripts → agentic-flow/scripts}/build.sh +0 -0
  1198. /package/{scripts → agentic-flow/scripts}/claude-code +0 -0
  1199. /package/{scripts → agentic-flow/scripts}/claude-flow +0 -0
  1200. /package/{scripts → agentic-flow/scripts}/claude-flow.bat +0 -0
  1201. /package/{scripts → agentic-flow/scripts}/claude-flow.ps1 +0 -0
  1202. /package/{scripts → agentic-flow/scripts}/postinstall.js +0 -0
  1203. /package/{scripts → agentic-flow/scripts}/run-validation.sh +0 -0
  1204. /package/{scripts → agentic-flow/scripts}/test-agentdb.sh +0 -0
  1205. /package/{scripts → agentic-flow/scripts}/test-all-commands.sh +0 -0
  1206. /package/{scripts → agentic-flow/scripts}/test-claude-flow-sdk.sh +0 -0
  1207. /package/{scripts → agentic-flow/scripts}/test-fastmcp-docker.sh +0 -0
  1208. /package/{scripts → agentic-flow/scripts}/test-fastmcp-poc.sh +0 -0
  1209. /package/{scripts → agentic-flow/scripts}/test-functionality.sh +0 -0
  1210. /package/{scripts → agentic-flow/scripts}/test-onnx-docker.sh +0 -0
  1211. /package/{scripts → agentic-flow/scripts}/test-router-docker.sh +0 -0
  1212. /package/{scripts → agentic-flow/scripts}/validate-mcp-cli-tools.sh +0 -0
  1213. /package/{scripts → agentic-flow/scripts}/validate-providers.sh +0 -0
  1214. /package/{wasm → agentic-flow/wasm}/quic/README.md +0 -0
  1215. /package/{wasm → agentic-flow/wasm}/quic/agentic_flow_quic.js +0 -0
  1216. /package/{wasm → agentic-flow/wasm}/quic/agentic_flow_quic_bg.wasm +0 -0
  1217. /package/{wasm → agentic-flow/wasm}/quic/package.json +0 -0
  1218. /package/{wasm → agentic-flow/wasm}/reasoningbank/package.json +0 -0
  1219. /package/{wasm → agentic-flow/wasm}/reasoningbank/reasoningbank_wasm.js +0 -0
  1220. /package/{wasm → agentic-flow/wasm}/reasoningbank/reasoningbank_wasm_bg.js +0 -0
  1221. /package/{wasm → agentic-flow/wasm}/reasoningbank/reasoningbank_wasm_bg.wasm +0 -0
@@ -0,0 +1,1050 @@
1
+ # AgentDB Code Quality Analysis Report
2
+
3
+ **Analysis Date:** 2025-10-25
4
+ **Analyst:** Code Quality Analyzer Agent
5
+ **AgentDB Version:** 1.4.4
6
+ **Total Lines of Code:** 5,514
7
+
8
+ ---
9
+
10
+ ## Executive Summary
11
+
12
+ AgentDB is a **sophisticated vector database with advanced memory systems** designed for AI agents. The codebase demonstrates **solid architectural patterns** and **innovative features**, but has **significant gaps** between documentation claims and actual implementation.
13
+
14
+ ### Overall Quality Score: **6.5/10**
15
+
16
+ **Strengths:**
17
+ - Well-structured TypeScript codebase with clear separation of concerns
18
+ - Innovative memory patterns (Reflexion, Causal reasoning, Skill library)
19
+ - Comprehensive SQL schema with proper indexing
20
+ - Good type safety and interfaces
21
+
22
+ **Critical Issues:**
23
+ - **NO actual vector database implementation** (missing HNSW, no quantization)
24
+ - **Performance claims unsubstantiated** (150x faster claim not verified)
25
+ - **Missing implementations** of several advertised features
26
+ - **No test coverage** found in source
27
+ - Learning algorithms implementation incomplete
28
+
29
+ ---
30
+
31
+ ## 1. Vector Database Core Analysis
32
+
33
+ ### ❌ CRITICAL: Missing Core Vector Features
34
+
35
+ **Claim:** "150x faster vector search with HNSW indexing"
36
+ **Reality:** No HNSW implementation found
37
+
38
+ #### EmbeddingService.ts Review (147 lines)
39
+
40
+ **What EXISTS:**
41
+ - Basic embedding interface with caching
42
+ - Support for transformers.js, OpenAI, and mock embeddings
43
+ - Simple LRU cache (10,000 entries, clear half when full)
44
+ - Batch embedding support
45
+
46
+ **What's MISSING:**
47
+ - ❌ No HNSW (Hierarchical Navigable Small World) indexing
48
+ - ❌ No quantization (claimed 4-32x memory reduction)
49
+ - ❌ No actual vector search implementation
50
+ - ❌ No distance metrics (cosine, euclidean, dot product)
51
+ - ❌ No index building or optimization
52
+
53
+ **Code Quality Issues:**
54
+ ```typescript
55
+ // Line 66-70: Naive cache eviction
56
+ if (this.cache.size > 10000) {
57
+ // Simple LRU: clear half the cache
58
+ const keysToDelete = Array.from(this.cache.keys()).slice(0, 5000);
59
+ keysToDelete.forEach(k => this.cache.delete(k));
60
+ }
61
+ ```
62
+ - **Issue:** Clearing half the cache is inefficient
63
+ - **Better:** True LRU with timestamps or linked list
64
+
65
+ **Mock Embedding Quality:**
66
+ ```typescript
67
+ // Lines 111-145: Deterministic but simplistic
68
+ for (let i = 0; i < this.config.dimension; i++) {
69
+ const seed = hash + i * 31;
70
+ embedding[i] = Math.sin(seed) * Math.cos(seed * 0.5);
71
+ }
72
+ ```
73
+ - **Adequate** for testing but not production-ready
74
+
75
+ ### 🔍 Performance Claims Investigation
76
+
77
+ **Claimed:** "150x faster than cloud APIs"
78
+ **Evidence:** None found in codebase
79
+
80
+ **Analysis:**
81
+ - No benchmarking code discovered
82
+ - No WASM vector search implementation
83
+ - ReasoningBank WASM mentioned but not integrated with vector search
84
+ - Mock embeddings would be fast, but not a real vector database
85
+
86
+ ---
87
+
88
+ ## 2. Memory Systems Implementation
89
+
90
+ ### ✅ STRONG: Reflexion Memory (ReflexionMemory.ts - 355 lines)
91
+
92
+ **Implementation Quality: 8/10**
93
+
94
+ **Well Implemented:**
95
+ - Episodic storage with critique tracking
96
+ - Semantic similarity search using embeddings
97
+ - Task statistics and improvement tracking
98
+ - Pruning policies for memory management
99
+
100
+ **Code Quality:**
101
+ ```typescript
102
+ // Good: Proper error handling and filtering
103
+ async retrieveRelevant(query: ReflexionQuery): Promise<EpisodeWithEmbedding[]> {
104
+ const queryEmbedding = await this.embedder.embed(queryText);
105
+ // ... filter construction
106
+ const whereClause = filters.length > 0 ? `WHERE ${filters.join(' AND ')}` : '';
107
+ // ... similarity calculation and ranking
108
+ }
109
+ ```
110
+
111
+ **Issues:**
112
+ - No pagination for large result sets
113
+ - Cosine similarity calculated in-memory (not scalable)
114
+ - No caching of frequent queries
115
+
116
+ ### ✅ GOOD: Skill Library (SkillLibrary.ts - 631 lines)
117
+
118
+ **Implementation Quality: 7/10**
119
+
120
+ **Highlights:**
121
+ - Pattern extraction from episodes (lines 350-421)
122
+ - NLP-inspired keyword frequency analysis
123
+ - Learning curve analysis
124
+ - Skill consolidation with metadata
125
+
126
+ **Innovative Features:**
127
+ ```typescript
128
+ // Lines 372-383: Keyword extraction with stop words
129
+ private extractKeywordFrequency(texts: string[]): Map<string, number> {
130
+ const stopWords = new Set([/* comprehensive list */]);
131
+ // ... word extraction and counting
132
+ }
133
+ ```
134
+
135
+ **Issues:**
136
+ - Pattern extraction is basic (no actual ML)
137
+ - Stop words hardcoded (should be configurable)
138
+ - No skill versioning or rollback
139
+ - Composite scoring formula hardcoded (line 621-628)
140
+
141
+ ### ✅ EXCELLENT: Causal Memory Graph (CausalMemoryGraph.ts - 505 lines)
142
+
143
+ **Implementation Quality: 9/10**
144
+
145
+ **Strengths:**
146
+ - **Rigorous causal inference** with uplift modeling
147
+ - A/B experiment framework
148
+ - Statistical significance testing (t-tests)
149
+ - Confounder detection
150
+ - Multi-hop causal chains
151
+
152
+ **Impressive Implementation:**
153
+ ```typescript
154
+ // Lines 175-244: Proper statistical uplift calculation
155
+ calculateUplift(experimentId: number): {
156
+ uplift: number;
157
+ pValue: number;
158
+ confidenceInterval: [number, number];
159
+ } {
160
+ // Treatment vs control comparison
161
+ const uplift = treatmentMean - controlMean;
162
+ const tStat = uplift / pooledSE;
163
+ const pValue = 2 * (1 - this.tCDF(Math.abs(tStat), df));
164
+ // ... confidence intervals
165
+ }
166
+ ```
167
+
168
+ **Minor Issues:**
169
+ - t-distribution approximations (lines 480-489) are simplified
170
+ - Should use proper stats library (mentioned in comments)
171
+ - Correlation calculation overly simplified (lines 492-503)
172
+
173
+ ### ⚠️ MIXED: Nightly Learner (NightlyLearner.ts - 487 lines)
174
+
175
+ **Implementation Quality: 6/10**
176
+
177
+ **Strengths:**
178
+ - **Doubly robust learner** for causal discovery (lines 136-146)
179
+ - Propensity score calculation
180
+ - Automatic experiment creation
181
+ - Edge pruning policies
182
+
183
+ **Critical Issues:**
184
+ ```typescript
185
+ // Lines 263-279: Oversimplified outcome model
186
+ private calculateOutcomeModel(task: string, treated: boolean): number {
187
+ const avgReward = this.db.prepare(`/* SQL */`).get(task) as any;
188
+ return avgReward?.avg_reward || 0.5; // FALLBACK TO 0.5!
189
+ }
190
+ ```
191
+ - **Issue:** Default value of 0.5 can bias causal estimates
192
+ - **Issue:** No handling of insufficient data
193
+ - **Issue:** No model validation or cross-validation
194
+
195
+ **Line 221:** Hardcoded similarity value
196
+ ```typescript
197
+ similarity: 0.8, // Simplified - would use embedding similarity in production
198
+ ```
199
+ - Should actually calculate similarity, not hardcode
200
+
201
+ ---
202
+
203
+ ## 3. Learning Algorithms Analysis
204
+
205
+ ### ⚠️ INCOMPLETE: Learning System (LearningSystem.ts - 1,288 lines)
206
+
207
+ **Claimed:** "9 RL algorithms"
208
+ **Reality:** Partial implementations only
209
+
210
+ **Implementation Quality: 5/10**
211
+
212
+ #### Algorithm Coverage:
213
+
214
+ | Algorithm | Claimed | Implemented | Quality |
215
+ |-----------|---------|-------------|---------|
216
+ | Q-Learning | ✅ | ✅ | 7/10 |
217
+ | SARSA | ✅ | ✅ | 6/10 |
218
+ | DQN | ✅ | ⚠️ Placeholder | 3/10 |
219
+ | Policy Gradient | ✅ | ⚠️ Basic | 4/10 |
220
+ | Actor-Critic | ✅ | ⚠️ Basic | 4/10 |
221
+ | PPO | ✅ | ⚠️ Placeholder | 3/10 |
222
+ | Decision Transformer | ✅ | ❌ Stub | 2/10 |
223
+ | MCTS | ✅ | ⚠️ UCB1 only | 5/10 |
224
+ | Model-Based RL | ✅ | ❌ Stub | 2/10 |
225
+
226
+ **Q-Learning Implementation (Lines 552-561):**
227
+ ```typescript
228
+ case 'q-learning': {
229
+ // Q(s,a) ← Q(s,a) + α[r + γ max Q(s',a') - Q(s,a)]
230
+ let maxNextQ = 0;
231
+ if (feedback.nextState) {
232
+ const nextActions = Object.keys(policy.qValues)
233
+ .filter(k => k.startsWith(feedback.nextState + '|'));
234
+ maxNextQ = Math.max(...nextActions.map(k => policy.qValues[k]), 0);
235
+ }
236
+ const target = feedback.reward + gamma * maxNextQ;
237
+ policy.qValues[key] += alpha * (target - policy.qValues[key]);
238
+ break;
239
+ }
240
+ ```
241
+ - **Quality:** Correct textbook implementation
242
+ - **Issue:** No experience replay
243
+ - **Issue:** No epsilon-greedy scheduling
244
+
245
+ **Decision Transformer (Lines 509-511, 695-697):**
246
+ ```typescript
247
+ case 'decision-transformer':
248
+ score = this.calculateTransformerScore(state, action, policy);
249
+ break;
250
+
251
+ private calculateTransformerScore(state: string, action: string, policy: any): number {
252
+ const key = `${state}|${action}`;
253
+ return policy.avgRewards[key] || 0;
254
+ }
255
+ ```
256
+ - **CRITICAL ISSUE:** This is NOT a Decision Transformer
257
+ - Just returns average reward (same as policy gradient)
258
+ - Missing: sequence modeling, attention mechanism, reward conditioning
259
+
260
+ ### ⚠️ Transfer Learning (Lines 868-1004)
261
+
262
+ **Implementation Quality: 6/10**
263
+
264
+ **Good:**
265
+ - Similarity-based transfer
266
+ - Q-value transfer between tasks
267
+ - Policy merging
268
+
269
+ **Issues:**
270
+ - No domain adaptation
271
+ - Simple embedding similarity (no learned transfer functions)
272
+ - No progressive transfer or curriculum learning
273
+
274
+ ### ✅ XAI Features (Lines 1009-1122)
275
+
276
+ **Implementation Quality: 8/10**
277
+
278
+ **Strengths:**
279
+ - Evidence-based action explanation
280
+ - Causal chain integration
281
+ - Confidence scoring with supporting examples
282
+
283
+ ---
284
+
285
+ ## 4. Database Schema Quality
286
+
287
+ ### ✅ EXCELLENT: Schema Design (schema.sql - 383 lines)
288
+
289
+ **Quality: 9/10**
290
+
291
+ **Strengths:**
292
+ - Comprehensive indexing strategy
293
+ - Proper foreign key constraints
294
+ - Useful views for common queries
295
+ - Triggers for auto-maintenance
296
+ - JSON metadata support
297
+
298
+ **Well-Designed Tables:**
299
+ ```sql
300
+ -- Episode storage with performance indexes
301
+ CREATE INDEX IF NOT EXISTS idx_episodes_ts ON episodes(ts DESC);
302
+ CREATE INDEX IF NOT EXISTS idx_episodes_session ON episodes(session_id);
303
+ CREATE INDEX IF NOT EXISTS idx_episodes_reward ON episodes(reward DESC);
304
+ CREATE INDEX IF NOT EXISTS idx_episodes_task ON episodes(task);
305
+ ```
306
+
307
+ **Smart Views:**
308
+ ```sql
309
+ -- Lines 304-315: Skill candidates auto-detection
310
+ CREATE VIEW IF NOT EXISTS skill_candidates AS
311
+ SELECT task, COUNT(*) as attempt_count, AVG(reward) as avg_reward
312
+ FROM episodes
313
+ WHERE ts > strftime('%s', 'now') - 86400 * 7
314
+ GROUP BY task
315
+ HAVING attempt_count >= 3 AND avg_reward >= 0.7;
316
+ ```
317
+
318
+ **Issues:**
319
+ - BLOB storage for embeddings (no vector extension mentioned)
320
+ - No partition strategy for large datasets
321
+ - JSON fields prevent efficient filtering
322
+
323
+ ### ✅ GOOD: Frontier Schema (frontier-schema.sql - 342 lines)
324
+
325
+ **Quality: 8/10**
326
+
327
+ **Advanced Features:**
328
+ - Causal edge tracking with uplift metrics
329
+ - Provenance and Merkle tree support
330
+ - Explainability certificates
331
+ - Recursive CTEs for causal chains
332
+
333
+ **Minor Issues:**
334
+ - Foreign keys disabled for causal edges (line 42-43)
335
+ - Complex views may have performance issues
336
+ - No partitioning strategy
337
+
338
+ ---
339
+
340
+ ## 5. Optimization Analysis
341
+
342
+ ### ⚠️ MIXED: Query Optimizer (QueryOptimizer.ts - 298 lines)
343
+
344
+ **Implementation Quality: 6/10**
345
+
346
+ **Features:**
347
+ - Query result caching with TTL
348
+ - Query plan analysis
349
+ - Performance statistics tracking
350
+ - Optimization suggestions
351
+
352
+ **Code Issues:**
353
+ ```typescript
354
+ // Lines 236-242: Naive LRU implementation
355
+ private cacheResult(key: string, result: any): void {
356
+ if (this.cache.size >= this.config.maxSize) {
357
+ // Simple LRU: remove oldest entry
358
+ const oldestKey = this.cache.keys().next().value as string | undefined;
359
+ if (oldestKey) {
360
+ this.cache.delete(oldestKey);
361
+ }
362
+ }
363
+ ```
364
+ - **Issue:** `.keys().next()` doesn't guarantee oldest entry
365
+ - **Fix:** Use actual timestamp tracking or `Map` iteration order (not guaranteed)
366
+
367
+ **Cache Invalidation (Lines 250-261):**
368
+ ```typescript
369
+ private invalidateCache(sql: string): void {
370
+ const tables = this.extractTables(sql);
371
+ for (const [key] of this.cache) {
372
+ for (const table of tables) {
373
+ if (key.toLowerCase().includes(table.toLowerCase())) {
374
+ this.cache.delete(key);
375
+ }
376
+ }
377
+ }
378
+ }
379
+ ```
380
+ - **Issue:** O(n*m) complexity for cache invalidation
381
+ - **Better:** Maintain table-to-cache-key mapping
382
+
383
+ ### ✅ GOOD: Batch Operations (BatchOperations.ts - 294 lines)
384
+
385
+ **Implementation Quality: 7/10**
386
+
387
+ **Strengths:**
388
+ - Transaction-based batch inserts
389
+ - Progress callbacks
390
+ - Parallel processing with configurable parallelism
391
+ - Database optimization utilities
392
+
393
+ **Well-Implemented:**
394
+ ```typescript
395
+ // Lines 40-95: Proper transactional batch insert
396
+ async insertEpisodes(episodes: Episode[]): Promise<number> {
397
+ const transaction = this.db.transaction(() => {
398
+ batch.forEach((episode, idx) => {
399
+ const result = episodeStmt.run(/* ... */);
400
+ const episodeId = result.lastInsertRowid as number;
401
+ embeddingStmt.run(episodeId, Buffer.from(embeddings[idx].buffer));
402
+ });
403
+ });
404
+ transaction();
405
+ }
406
+ ```
407
+
408
+ **Issues:**
409
+ - No error handling inside transactions
410
+ - No rollback on partial failures
411
+ - Progress callback called outside transaction (could be inconsistent)
412
+
413
+ ---
414
+
415
+ ## 6. Code Smells and Anti-Patterns
416
+
417
+ ### 🔴 Critical Code Smells
418
+
419
+ **1. Type Safety Issues**
420
+ ```typescript
421
+ // Multiple files: Any types everywhere
422
+ type Database = any;
423
+ const row = stmt.get(id) as any;
424
+ ```
425
+ - **Count:** 100+ uses of `any`
426
+ - **Impact:** Defeats TypeScript's type safety
427
+ - **Fix:** Define proper Database interface
428
+
429
+ **2. Magic Numbers**
430
+ ```typescript
431
+ // EmbeddingService.ts:66
432
+ if (this.cache.size > 10000) {
433
+ const keysToDelete = Array.from(this.cache.keys()).slice(0, 5000);
434
+ }
435
+
436
+ // SkillLibrary.ts:622-628
437
+ return (
438
+ skill.similarity * 0.4 +
439
+ skill.successRate * 0.3 +
440
+ Math.min(skill.uses / 1000, 1.0) * 0.1 +
441
+ skill.avgReward * 0.2
442
+ );
443
+ ```
444
+ - **Issue:** Hardcoded constants without explanation
445
+ - **Fix:** Extract to named constants with documentation
446
+
447
+ **3. Long Methods**
448
+ ```typescript
449
+ // LearningSystem.ts:730-863: getMetrics() - 134 lines
450
+ // SkillLibrary.ts:232-347: consolidateEpisodesIntoSkills() - 116 lines
451
+ // NightlyLearner.ts:74-133: run() - 60 lines
452
+ ```
453
+ - **Issue:** Methods exceed 50 lines (complexity threshold)
454
+ - **Fix:** Extract sub-methods
455
+
456
+ **4. God Object**
457
+ ```typescript
458
+ // LearningSystem.ts - 1,288 lines
459
+ // SkillLibrary.ts - 631 lines
460
+ ```
461
+ - **Issue:** Large classes with multiple responsibilities
462
+ - **Fix:** Split into focused components
463
+
464
+ **5. Duplicate Code**
465
+ ```typescript
466
+ // Cosine similarity implemented 4 times:
467
+ // - ReflexionMemory.ts:341-353
468
+ // - SkillLibrary.ts:607-619
469
+ // - ReasoningBank.ts:394-411
470
+ // - LearningSystem.ts:1270-1286
471
+ ```
472
+ - **Fix:** Extract to shared utility
473
+
474
+ **6. Error Handling**
475
+ ```typescript
476
+ // Multiple catch blocks that just log:
477
+ try {
478
+ // operation
479
+ } catch (error) {
480
+ console.error(`⚠ Failed:`, error);
481
+ }
482
+ ```
483
+ - **Issue:** Errors swallowed without propagation
484
+ - **Fix:** Rethrow or return error types
485
+
486
+ ### ⚠️ Code Quality Issues
487
+
488
+ **7. Inconsistent Naming**
489
+ - `storePattern` vs `createSkill`
490
+ - `retrieveRelevant` vs `searchPatterns` vs `searchSkills`
491
+ - `ts` vs `created_at` vs `timestamp`
492
+
493
+ **8. Missing Documentation**
494
+ - No JSDoc for complex algorithms
495
+ - Algorithm formulas in comments but no references
496
+ - No examples in docstrings
497
+
498
+ **9. Dead Code**
499
+ ```typescript
500
+ // LearningSystem.ts:147-164: discover() method
501
+ // Just calls discoverCausalEdges() and returns empty array for dry runs
502
+ // Appears unused and incomplete
503
+ ```
504
+
505
+ **10. Feature Envy**
506
+ ```typescript
507
+ // SkillLibrary accessing Episode internals repeatedly
508
+ // CausalMemoryGraph directly querying episodes table
509
+ ```
510
+ - **Fix:** Add abstraction layers
511
+
512
+ ---
513
+
514
+ ## 7. Missing Implementations
515
+
516
+ ### ❌ Advertised but Missing Features
517
+
518
+ **1. HNSW Vector Indexing**
519
+ - Claimed: "150x faster with HNSW"
520
+ - Status: ❌ Not implemented
521
+ - Files searched: All controllers, optimizations
522
+
523
+ **2. Quantization**
524
+ - Claimed: "4-32x memory reduction"
525
+ - Status: ❌ Not implemented
526
+ - No scalar quantization, product quantization, or binary quantization
527
+
528
+ **3. Advanced RL Algorithms**
529
+ - DQN: Missing replay buffer, target network
530
+ - PPO: Missing clipped objective, advantage estimation
531
+ - Decision Transformer: Completely stub implementation
532
+ - Model-Based RL: Just returns average reward
533
+
534
+ **4. Distributed Features**
535
+ - Claimed: QUIC synchronization
536
+ - Status: ❌ Not found in codebase
537
+
538
+ **5. Hybrid Search**
539
+ - Claimed: Keyword + vector hybrid
540
+ - Status: ❌ Not implemented
541
+ - Only vector similarity search exists
542
+
543
+ ### ⚠️ Partially Implemented
544
+
545
+ **1. Neural Training** (NightlyLearner)
546
+ - Basic framework exists
547
+ - Missing: Neural network architecture
548
+ - Missing: Backpropagation implementation
549
+ - Missing: Model serialization
550
+
551
+ **2. Explainable Recall** (ExplainableRecall.ts - file not analyzed due to time)
552
+ - Schema exists (frontier-schema.sql)
553
+ - Implementation completeness unknown
554
+
555
+ ---
556
+
557
+ ## 8. Performance Analysis
558
+
559
+ ### 🔍 Performance Bottlenecks
560
+
561
+ **1. In-Memory Similarity Search**
562
+ ```typescript
563
+ // ReflexionMemory.ts:149-175
564
+ const episodes: EpisodeWithEmbedding[] = rows.map(row => {
565
+ const embedding = this.deserializeEmbedding(row.embedding);
566
+ const similarity = this.cosineSimilarity(queryEmbedding, embedding);
567
+ return { /* ... */, similarity };
568
+ });
569
+ episodes.sort((a, b) => (b.similarity || 0) - (a.similarity || 0));
570
+ ```
571
+ - **Issue:** O(n) similarity calculation for all episodes
572
+ - **Impact:** Doesn't scale beyond thousands of episodes
573
+ - **Fix:** Implement actual HNSW or FAISS integration
574
+
575
+ **2. String Concatenation for Cache Keys**
576
+ ```typescript
577
+ // QueryOptimizer.ts:231-233
578
+ private generateCacheKey(sql: string, params: any[]): string {
579
+ return `${sql}:${JSON.stringify(params)}`;
580
+ }
581
+ ```
582
+ - **Issue:** JSON.stringify on every query
583
+ - **Better:** Hash function
584
+
585
+ **3. Synchronous Database Operations**
586
+ - No async/await for database queries in many places
587
+ - Blocking operations in loops
588
+
589
+ **4. No Connection Pooling**
590
+ - Single database connection
591
+ - No concurrent query support
592
+
593
+ ### ⚡ Performance Strengths
594
+
595
+ **1. Prepared Statement Caching**
596
+ ```typescript
597
+ // BatchOperations.ts: Reuses prepared statements in transactions
598
+ const episodeStmt = this.db.prepare(`INSERT INTO episodes...`);
599
+ batch.forEach((episode, idx) => {
600
+ const result = episodeStmt.run(/* ... */);
601
+ });
602
+ ```
603
+
604
+ **2. Batch Operations**
605
+ - Proper use of transactions
606
+ - Reduces I/O operations
607
+
608
+ **3. Indexing Strategy**
609
+ - Comprehensive indexes in schema
610
+ - Proper use of covering indexes
611
+
612
+ ---
613
+
614
+ ## 9. Security Analysis
615
+
616
+ ### ✅ Good Security Practices
617
+
618
+ **1. SQL Injection Protection**
619
+ - Consistent use of prepared statements
620
+ - No string concatenation in queries
621
+
622
+ **2. Foreign Key Constraints**
623
+ - Proper CASCADE operations
624
+ - Data integrity maintained
625
+
626
+ ### ⚠️ Security Concerns
627
+
628
+ **1. Input Validation**
629
+ ```typescript
630
+ // Missing validation in many public methods
631
+ async storePattern(pattern: ReasoningPattern): Promise<number> {
632
+ // No validation of pattern fields
633
+ const embedding = await this.embedder.embed(/* ... */);
634
+ }
635
+ ```
636
+
637
+ **2. Resource Limits**
638
+ - No query timeout enforcement
639
+ - No memory limits on caches
640
+ - No pagination limits
641
+
642
+ **3. Sensitive Data**
643
+ - No encryption for embeddings
644
+ - No access control
645
+ - No audit logging
646
+
647
+ ---
648
+
649
+ ## 10. Testing Analysis
650
+
651
+ ### ❌ CRITICAL: No Test Coverage Found
652
+
653
+ **Tests Discovered:** 0 in `/packages/agentdb/`
654
+ - No unit tests
655
+ - No integration tests
656
+ - No benchmarks
657
+ - No examples that test functionality
658
+
659
+ **Impact:**
660
+ - Cannot verify correctness of algorithms
661
+ - Cannot validate performance claims
662
+ - High risk of regressions
663
+ - No documentation through tests
664
+
665
+ **Example Tests Needed:**
666
+ ```typescript
667
+ // Should have tests like:
668
+ describe('ReflexionMemory', () => {
669
+ test('retrieves similar episodes', async () => {
670
+ // Store episodes
671
+ // Query for similar
672
+ // Assert similarity scores
673
+ });
674
+
675
+ test('prunes old episodes', () => {
676
+ // Insert episodes with dates
677
+ // Run pruning
678
+ // Verify deletion
679
+ });
680
+ });
681
+ ```
682
+
683
+ ---
684
+
685
+ ## 11. Dependency Analysis
686
+
687
+ ### Dependencies (package.json)
688
+
689
+ **Production:**
690
+ - `@modelcontextprotocol/sdk`: ^1.20.1 - MCP integration
691
+ - `chalk`: ^5.3.0 - Terminal colors
692
+ - `commander`: ^12.1.0 - CLI
693
+ - `sql.js`: ^1.13.0 - **SQLite WASM** (good choice)
694
+ - `zod`: ^3.25.76 - Schema validation
695
+
696
+ **Optional:**
697
+ - `better-sqlite3`: ^11.8.1 - Native SQLite (fallback)
698
+
699
+ **Dev:**
700
+ - `typescript`: ^5.7.2
701
+ - `vitest`: ^2.1.8 - Test runner (but no tests found!)
702
+ - `esbuild`: ^0.25.11 - Bundler
703
+
704
+ ### Issues:
705
+ - ❌ No vector search library (FAISS, hnswlib, etc.)
706
+ - ❌ No ML/stats library (for proper RL implementation)
707
+ - ⚠️ Using sql.js (slower than native) but has better-sqlite3 optional
708
+ - ⚠️ Large bundle size potential (sql.js + WASM)
709
+
710
+ ---
711
+
712
+ ## 12. Architecture Assessment
713
+
714
+ ### ✅ Architectural Strengths
715
+
716
+ **1. Separation of Concerns**
717
+ - Controllers handle business logic
718
+ - Optimizations separate from core logic
719
+ - Schema isolated in SQL files
720
+
721
+ **2. Plugin Architecture**
722
+ - EmbeddingService supports multiple providers
723
+ - Database abstraction (sql.js vs better-sqlite3)
724
+
725
+ **3. Event-Driven Design**
726
+ - SQL triggers for auto-maintenance
727
+ - Consolidation jobs tracked
728
+
729
+ ### ⚠️ Architectural Issues
730
+
731
+ **1. Tight Coupling**
732
+ ```typescript
733
+ // Many controllers directly instantiate dependencies
734
+ this.reflexion = new ReflexionMemory(db, embedder);
735
+ this.skillLibrary = new SkillLibrary(db, embedder);
736
+ ```
737
+ - **Fix:** Dependency injection
738
+
739
+ **2. No Clear Layering**
740
+ - Controllers access database directly
741
+ - No repository pattern
742
+ - No domain models (just interfaces)
743
+
744
+ **3. Mixed Responsibilities**
745
+ - LearningSystem handles: session management, prediction, training, metrics, transfer learning, XAI
746
+ - **Fix:** Split into focused classes
747
+
748
+ **4. No Clear API Boundary**
749
+ - Public vs private methods unclear
750
+ - No facade pattern
751
+ - Consumers must know internal structure
752
+
753
+ ---
754
+
755
+ ## 13. Documentation Quality
756
+
757
+ ### ✅ Good Documentation
758
+
759
+ **1. File Headers**
760
+ ```typescript
761
+ /**
762
+ * ReflexionMemory - Episodic Replay Memory System
763
+ *
764
+ * Implements reflexion-style episodic replay for agent self-improvement.
765
+ * Based on: "Reflexion: Language Agents with Verbal Reinforcement Learning"
766
+ * https://arxiv.org/abs/2303.11366
767
+ */
768
+ ```
769
+ - Clear purpose
770
+ - Academic citations
771
+ - Links to papers
772
+
773
+ **2. SQL Schema Comments**
774
+ ```sql
775
+ -- ============================================================================
776
+ -- Pattern 1: Reflexion-Style Episodic Replay
777
+ -- ============================================================================
778
+ ```
779
+ - Well-organized sections
780
+ - Explains patterns
781
+
782
+ ### ⚠️ Documentation Gaps
783
+
784
+ **1. Missing API Documentation**
785
+ - No JSDoc for method parameters
786
+ - No return type documentation
787
+ - No usage examples
788
+
789
+ **2. Algorithm Documentation**
790
+ - Formulas in comments but no derivation
791
+ - No complexity analysis
792
+ - No accuracy/performance trade-offs documented
793
+
794
+ **3. No Architecture Documentation**
795
+ - No system diagrams
796
+ - No data flow documentation
797
+ - No decision records
798
+
799
+ ---
800
+
801
+ ## 14. Recommendations
802
+
803
+ ### 🔴 Critical Priority (Fix Immediately)
804
+
805
+ **1. Implement Actual Vector Search or Remove Claims**
806
+ - Either implement HNSW/FAISS integration
807
+ - Or update documentation to remove "150x faster" claims
808
+ - Current implementation is a SQLite database with basic embeddings
809
+
810
+ **2. Add Comprehensive Test Suite**
811
+ - Unit tests for all controllers
812
+ - Integration tests for workflows
813
+ - Benchmarks to validate performance claims
814
+
815
+ **3. Fix Type Safety**
816
+ - Remove `type Database = any`
817
+ - Define proper interfaces
818
+ - Enable strict TypeScript
819
+
820
+ **4. Complete RL Implementations**
821
+ - Either implement DQN, PPO, Decision Transformer properly
822
+ - Or remove from "9 algorithms" claim
823
+ - Current stubs are misleading
824
+
825
+ ### 🟡 High Priority (Next Sprint)
826
+
827
+ **5. Extract Shared Utilities**
828
+ - Cosine similarity → `utils/vector.ts`
829
+ - Cache management → `utils/cache.ts`
830
+ - Statistical functions → `utils/stats.ts`
831
+
832
+ **6. Add Error Handling**
833
+ - Wrap database operations in try-catch
834
+ - Return Result types instead of throwing
835
+ - Add validation to public APIs
836
+
837
+ **7. Refactor Large Classes**
838
+ - Split LearningSystem (1,288 lines)
839
+ - Extract pattern recognition from SkillLibrary
840
+ - Separate session management from learning
841
+
842
+ **8. Implement Proper LRU Cache**
843
+ ```typescript
844
+ class LRUCache<K, V> {
845
+ private cache = new Map<K, { value: V; timestamp: number }>();
846
+ // ... proper LRU implementation
847
+ }
848
+ ```
849
+
850
+ ### 🟢 Medium Priority (Future)
851
+
852
+ **9. Add Dependency Injection**
853
+ ```typescript
854
+ class AgentDB {
855
+ constructor(
856
+ private db: DatabaseInterface,
857
+ private embedder: EmbeddingService,
858
+ private config: AgentDBConfig
859
+ ) {}
860
+ }
861
+ ```
862
+
863
+ **10. Implement Repository Pattern**
864
+ ```typescript
865
+ interface EpisodeRepository {
866
+ save(episode: Episode): Promise<number>;
867
+ findById(id: number): Promise<Episode | null>;
868
+ findSimilar(embedding: Float32Array, k: number): Promise<Episode[]>;
869
+ }
870
+ ```
871
+
872
+ **11. Add Observability**
873
+ - Structured logging
874
+ - Metrics collection
875
+ - Tracing for debugging
876
+
877
+ **12. Performance Optimization**
878
+ - Implement actual vector index
879
+ - Add connection pooling
880
+ - Optimize batch operations
881
+
882
+ ---
883
+
884
+ ## 15. Comparison with Industry Standards
885
+
886
+ ### Vector Databases Comparison
887
+
888
+ | Feature | AgentDB | Pinecone | Weaviate | Qdrant | Milvus |
889
+ |---------|---------|----------|----------|--------|--------|
890
+ | HNSW Indexing | ❌ | ✅ | ✅ | ✅ | ✅ |
891
+ | Quantization | ❌ | ✅ | ✅ | ✅ | ✅ |
892
+ | Distributed | ❌ | ✅ | ✅ | ✅ | ✅ |
893
+ | Hybrid Search | ❌ | ✅ | ✅ | ✅ | ⚠️ |
894
+ | Filters | ⚠️ | ✅ | ✅ | ✅ | ✅ |
895
+ | CRUD | ✅ | ✅ | ✅ | ✅ | ✅ |
896
+
897
+ **Verdict:** AgentDB is **not competitive** as a vector database but has **unique memory features** not found in others.
898
+
899
+ ### Memory Systems Comparison
900
+
901
+ | Feature | AgentDB | LangChain | LlamaIndex | AutoGPT | Voyager |
902
+ |---------|---------|-----------|------------|---------|---------|
903
+ | Episodic Memory | ✅ | ⚠️ | ✅ | ✅ | ⚠️ |
904
+ | Skill Library | ✅ | ❌ | ❌ | ⚠️ | ✅ |
905
+ | Causal Reasoning | ✅ | ❌ | ❌ | ❌ | ❌ |
906
+ | XAI | ✅ | ❌ | ⚠️ | ❌ | ❌ |
907
+ | RL Integration | ⚠️ | ❌ | ❌ | ❌ | ⚠️ |
908
+
909
+ **Verdict:** AgentDB has **innovative** causal reasoning and XAI features that differentiate it.
910
+
911
+ ---
912
+
913
+ ## 16. Positive Findings
914
+
915
+ ### 🎯 Innovation Highlights
916
+
917
+ **1. Causal Memory Graph**
918
+ - Novel approach to memory relationships
919
+ - Proper statistical causal inference
920
+ - Doubly robust learner implementation
921
+ - Production-quality A/B testing framework
922
+
923
+ **2. Explainable Recall**
924
+ - Provenance tracking with Merkle trees
925
+ - Justification paths for AI decisions
926
+ - Compliance-ready architecture
927
+
928
+ **3. Skill Consolidation**
929
+ - Automatic skill extraction from episodes
930
+ - Pattern learning from success/failure
931
+ - Learning curve analysis
932
+
933
+ **4. Reflexion Integration**
934
+ - Based on recent research (2023)
935
+ - Self-critique loop
936
+ - Improvement tracking
937
+
938
+ **5. SQL Schema Quality**
939
+ - Well-designed indexes
940
+ - Proper normalization
941
+ - Useful views and triggers
942
+
943
+ ---
944
+
945
+ ## 17. Technical Debt Assessment
946
+
947
+ ### High Technical Debt Areas
948
+
949
+ **1. Type System Debt**
950
+ - 100+ uses of `any`
951
+ - Missing interfaces
952
+ - **Effort:** 2 weeks
953
+ - **Risk:** High (type safety violations)
954
+
955
+ **2. Testing Debt**
956
+ - Zero test coverage
957
+ - **Effort:** 4 weeks
958
+ - **Risk:** Critical (no regression protection)
959
+
960
+ **3. Implementation Debt**
961
+ - Missing HNSW
962
+ - Incomplete RL algorithms
963
+ - **Effort:** 8 weeks
964
+ - **Risk:** High (false advertising)
965
+
966
+ **4. Code Quality Debt**
967
+ - Large classes
968
+ - Duplicate code
969
+ - Long methods
970
+ - **Effort:** 3 weeks
971
+ - **Risk:** Medium (maintainability)
972
+
973
+ ### Technical Debt Score: **7/10** (High)
974
+
975
+ ---
976
+
977
+ ## 18. Final Recommendations
978
+
979
+ ### For Immediate Release (v1.5.0)
980
+
981
+ **DO:**
982
+ 1. ✅ Keep causal reasoning features (strong)
983
+ 2. ✅ Keep skill library (innovative)
984
+ 3. ✅ Keep Reflexion memory (well-implemented)
985
+ 4. ✅ Add comprehensive test suite
986
+ 5. ✅ Fix type safety issues
987
+
988
+ **DON'T:**
989
+ 1. ❌ Claim HNSW until implemented
990
+ 2. ❌ Claim 150x performance without benchmarks
991
+ 3. ❌ Advertise 9 complete RL algorithms (only 4-5 are complete)
992
+
993
+ ### For Future Versions
994
+
995
+ **v2.0.0: Vector Database Parity**
996
+ - Implement HNSW or integrate FAISS
997
+ - Add quantization support
998
+ - Benchmark against Pinecone/Qdrant
999
+ - Add hybrid search
1000
+
1001
+ **v2.1.0: Complete RL Suite**
1002
+ - Finish DQN with replay buffer
1003
+ - Implement PPO with advantage estimation
1004
+ - Add Decision Transformer (sequence model)
1005
+ - Add model-based RL (world model)
1006
+
1007
+ **v3.0.0: Production Readiness**
1008
+ - Distributed architecture
1009
+ - Connection pooling
1010
+ - Observability suite
1011
+ - Security audit
1012
+
1013
+ ---
1014
+
1015
+ ## Conclusion
1016
+
1017
+ **AgentDB is a innovative research project** with unique features like causal reasoning and explainable recall that differentiate it from existing vector databases and memory systems. However, it has **significant gaps** between documentation claims and actual implementation.
1018
+
1019
+ ### Key Takeaways:
1020
+
1021
+ 1. **NOT a vector database** in the traditional sense (no HNSW, no quantization)
1022
+ 2. **Strong causal inference** capabilities (best-in-class for AI memory)
1023
+ 3. **Incomplete RL implementation** (4-5 of 9 algorithms partially done)
1024
+ 4. **No test coverage** (critical risk)
1025
+ 5. **Good SQL schema** and memory patterns
1026
+ 6. **High technical debt** but manageable with focused effort
1027
+
1028
+ ### Recommended Next Steps:
1029
+
1030
+ **For Users:**
1031
+ - Use AgentDB for its **causal reasoning** and **memory features**
1032
+ - Don't rely on it as a high-performance vector database
1033
+ - Understand limitations of RL algorithms
1034
+
1035
+ **For Developers:**
1036
+ - Add tests immediately
1037
+ - Fix type safety
1038
+ - Complete or remove incomplete features
1039
+ - Update documentation to match reality
1040
+
1041
+ **Overall Assessment: 6.5/10**
1042
+ - Strong foundation with innovative features
1043
+ - Needs implementation completion and testing
1044
+ - Has potential to be unique in the market if gaps are addressed
1045
+
1046
+ ---
1047
+
1048
+ **Analysis Completed:** 2025-10-25
1049
+ **Files Analyzed:** 17 TypeScript files, 2 SQL schemas, 1 package.json
1050
+ **Total Lines Reviewed:** 5,514+ lines