@weng-lab/visualization 2.6.0-beta.1 → 2.7.0-beta.0

package/dist/visualization.es23.js

@@ -1,116 +1,104 @@
-import { jsxs as S, jsx as p, Fragment as oe } from "react/jsx-runtime";
-import ce, { useMemo as z, useCallback as ne } from "react";
-import se from "./visualization.es93.js";
-import { calculateBoxStats as re, scottRule as me, silvermanRule as he, kernelDensityEstimator as pe, seededRandom as ue, gaussian as fe } from "./visualization.es22.js";
-import de from "./visualization.es94.js";
-import ie from "./visualization.es48.js";
-import ve from "./visualization.es83.js";
-import ye from "./visualization.es26.js";
-import ke from "./visualization.es95.js";
-import { line as ge } from "./visualization.es85.js";
-import xe from "./visualization.es50.js";
-import $e from "./visualization.es86.js";
-const Re = ({
-  distribution: t,
-  distIndex: $,
-  violinProps: l,
-  crossProps: D,
-  valueScale: m,
-  labelScale: C,
-  offset: Q,
-  labels: R,
-  disableCrossPlot: P,
-  disableViolinPlot: H,
-  horizontal: o,
-  pointTooltipBody: k,
-  onViolinClicked: b,
-  onPointClicked: A
-}) => {
-  const {
-    tooltipData: a,
-    tooltipLeft: X,
-    tooltipTop: N,
-    tooltipOpen: V,
-    showTooltip: Y,
-    hideTooltip: _
-  } = ie(), u = t.data.flatMap((e) => e.value), {
-    min: w,
-    max: T,
-    firstQuartile: F,
-    thirdQuartile: j,
-    median: E,
-    outliers: q
-  } = re(u, D?.outliers ?? "all"), ee = t.data.filter((e) => q.includes(e.value)).map((e) => ({
-    ...e,
-    outlier: !0
-  })), te = t.data.filter((e) => !q.includes(e.value)), G = z(() => {
-    const e = (T - w) / Math.max(100, u.length), s = ve(w, T, e), r = typeof l?.bandwidth == "number" ? l.bandwidth : typeof l?.bandwidth == "function" ? l.bandwidth(u) : l?.bandwidth === "scott" ? me(u) : he(u);
-    return [...pe(fe(r), s)(u)].sort((d, c) => d.value - c.value);
-  }, [u, T, w, l]), W = Math.min(C.bandwidth(), 50), ae = D?.medianWidth ?? W * 0.25, L = z(() => ({
-    label: t.label,
-    sampleSize: t.data.length,
-    median: E.toFixed(2),
-    firstQuartile: F.toFixed(2),
-    thirdQuartile: j.toFixed(2)
-  }), [t.label, t.data.length, E, F, j]), M = ne((e, s, r) => {
-    Y({
-      tooltipData: r && k ? {
-        point: r
-      } : s,
-      tooltipLeft: e.pageX,
-      tooltipTop: e.pageY
-    });
-  }, [k, Y]), J = () => {
-    !b || !a || a && b(t);
-  }, O = (e) => {
-    !A || !a || a && A(e);
-  }, n = o ? (C(R[$]) ?? 0) + W / 2 : (C(R[$]) ?? 0) + Q + C.bandwidth() / 2, K = ye().domain([0, ke(G, (e) => Math.abs(e.count)) || 1]).range([0, W / 2]), U = G.filter((e) => e && e.count != null && e.value != null);
-  let g = [...U.map((e) => ({
-    x: n + K(e.count),
-    y: m(e.value)
-  })), ...U.slice().reverse().map((e) => ({
-    x: n - K(e.count),
-    y: m(e.value)
-  }))];
-  if (g.length > 2) {
-    const e = g.slice(1);
-    e.push(g[0]), e.push(g[1]), g = e;
+const Y = (t, s, r) => {
+  const e = t.range().map((n) => t.invert((n - s) / r));
+  return t.copy().domain(e);
+}, d = (t, s, r) => {
+  const e = t.range().map((n) => t.invert((n - s) / r));
+  return t.copy().domain(e);
+}, w = (t, s, r, e) => t.invert((e - s) / r), L = (t, s) => {
+  let r = !1;
+  for (let e = 0, n = s.length - 1; e < s.length; n = e++) {
+    const o = s[e].x, c = s[e].y, f = s[n].x, h = s[n].y;
+    c > t.y != h > t.y && //does the ray intersect the line segment from the current to the previous vertex?
+    t.x < (f - o) * (t.y - c) / (h - c) + o && (r = !r);
   }
-  const Z = ge().x((e) => o ? e.y : e.x).y((e) => o ? e.x : e.y).curve($e)(g) ?? null;
-  return /* @__PURE__ */ S(ce.Fragment, {
-    //display plots if enough data provided
-    children: [
-      /* @__PURE__ */ S("g", { onMouseLeave: _, transform: o ? `translate(${Q}, 0)` : "translate(0, 0)", children: [
-        t.data.length >= (l?.pointDisplayThreshold ?? 3) && !H && Z && /* @__PURE__ */ p(oe, { children: /* @__PURE__ */ p("path", { d: Z, fill: t.violinColor ?? "none", fillOpacity: t.opacity ?? 0.3, stroke: t.violinColor ?? "black", strokeOpacity: t.opacity ?? 1, strokeWidth: a === L ? (l?.stroke ?? 1) + 1 : l?.stroke ?? 1, pointerEvents: "all", onMouseMove: (e) => M(e, L), onClick: J }) }),
-        t.data.length >= (l?.pointDisplayThreshold ?? 3) && !P && /* @__PURE__ */ p(se, { crossProps: D, left: o ? 0 : n, top: o ? n : 0, median: E, firstQuartile: F, thirdQuartile: j, valueScale: m, medianWidth: ae, tooltipData: a ?? {}, handleMouseMove: M, handleCrossClick: J, disableViolinPlot: H, tooltip: L, horizontal: o }),
-        ee.map((e, s) => {
-          const r = m(e.value), x = m(e.value), f = o ? x : n, d = o ? n : r, c = {
-            outlier: !0,
-            label: t.label,
-            value: e.value.toFixed(2)
-          }, h = k ? a?.point === e : a?.label === c.label && a?.value === c.value, i = e.radius ?? 4;
-          return /* @__PURE__ */ p("circle", { cx: f, cy: d, r: h ? i + 1 : i, stroke: h ? "#000000" : e.stroke ?? "none", fill: e.color ?? t.violinColor ?? "#000000", opacity: e.opacity ?? t.opacity ?? 1, pointerEvents: "all", onMouseMove: (v) => M(v, c, e), onClick: () => O(e) }, `outlier-${s}`);
-        }),
-        t.data.length >= (l?.pointDisplayThreshold ?? 3) && l?.showAllPoints && te.map((e, s) => {
-          const r = m(e.value), x = m(e.value), f = l?.jitter ?? 0, d = `${t.label}-${e}-${s}`, c = f > 0 ? (ue(d) - 0.5) * 2 * f : 0, h = o ? x : n + c, i = o ? n + c : r, v = {
-            label: t.label,
-            value: e.value.toFixed(2)
-          }, B = k ? a?.point === e : a?.label === v.label && a?.value === v.value, I = e.radius ?? 2, y = B ? I + 1 : I;
-          return /* @__PURE__ */ p("path", { d: `M ${h},${i} m -${y},0 a ${y},${y} 0 1,0 ${2 * y},0 a ${y},${y} 0 1,0 -${2 * y},0`, stroke: B ? "black" : e.stroke ?? "none", fill: e.color ?? t.violinColor ?? "black", opacity: e.opacity ?? t.opacity ?? 1, pointerEvents: "all", onMouseMove: (le) => M(le, v, e), onClick: () => O(e) }, `${$}-point-${s}`);
-        }),
-        t.data.length < (l?.pointDisplayThreshold ?? 3) && t.data.map((e, s) => {
-          const r = m(e.value), x = m(e.value), f = o ? x : n, d = o ? n : r, c = e.radius ?? 2, h = {
-            label: t.label,
-            value: e.value.toFixed(2)
-          }, i = k ? a?.point === e : a?.label === h.label && a?.value === h.value;
-          return /* @__PURE__ */ p("circle", { cx: f, cy: d, r: i ? c + 1 : c, stroke: i ? "black" : e.stroke ?? "none", fill: e.color ?? t.violinColor ?? "black", opacity: e.opacity ?? t.opacity ?? 1, pointerEvents: "all", onMouseMove: (v) => M(v, h, e), onClick: () => O(e) }, `thresh-${s}`);
-        })
-      ] }, `group-${$}`),
-      V && a && /* @__PURE__ */ p(xe, { children: /* @__PURE__ */ p(de, { left: X ?? 0, top: N ?? 0, data: a, open: V, pointTooltipBody: k }, `${X}-${N}`) })
-    ]
-  }, `frag-${$}`);
+  return r;
+}, V = (t, s = 5) => {
+  const [r, e] = t.domain();
+  if (s < 2) return [r, e];
+  const n = (e - r) / (s - 1);
+  return Array.from({
+    length: s
+  }, (o, c) => parseFloat((r + c * n).toPrecision(10)));
+}, l = Math.sqrt(Math.PI) / 2, y = Math.sqrt(4 * Math.PI / (3 * Math.sqrt(3))), i = Math.sqrt(9 * Math.PI / 20), a = i / 3, M = [[0, -y], [y * Math.sqrt(3) / 2, y / 2], [-(y * Math.sqrt(3)) / 2, y / 2]], m = [[-l, -l], [l, -l], [l, l], [-l, l]], E = [[-a, -i], [a, -i], [a, -a], [i, -a], [i, a], [a, a], [a, i], [-a, i], [-a, a], [-i, a], [-i, -a], [-a, -a]], u = (t, s) => {
+  const r = Math.cos(s), e = Math.sin(s);
+  return t.map(([n, o]) => [n * r - o * e, n * e + o * r]);
+}, A = (t) => t.map(([s, r]) => [s, -r]), D = {
+  triangle: M,
+  triangleDown: A(M),
+  square: m,
+  // A square stood on its corner - which is exactly the half-diagonal √(π/2) the area solves to.
+  diamond: u(m, Math.PI / 4),
+  cross: E,
+  x: u(E, Math.PI / 4)
+}, k = (t, s, r, e) => {
+  if (!t || t === "circle") return null;
+  const n = D[t];
+  return n ? n.map(([o, c]) => [s + o * e, r + c * e]) : null;
+}, q = (t, s, r, e) => {
+  const n = k(t, s, r, e);
+  return n ? n.map(([o, c]) => `${o},${c}`).join(" ") : null;
+}, T = (t) => {
+  if (t.length === 0)
+    return {
+      x: [0, 1],
+      y: [0, 1]
+    };
+  let s = t[0].x, r = t[0].x, e = t[0].y, n = t[0].y;
+  for (const o of t)
+    o.x < s && (s = o.x), o.x > r && (r = o.x), o.y < e && (e = o.y), o.y > n && (n = o.y);
+  return {
+    x: [s, r],
+    y: [e, n]
+  };
+}, C = 0.05, _ = ([t, s]) => {
+  const r = s - t, e = (r > 0 ? r : Math.abs(s) || 1) * C;
+  return [t - e, s + e];
+}, R = (t) => ({
+  xDomain: _(t.x),
+  yDomain: _(t.y)
+}), x = (...t) => {
+  const s = t.filter((e) => e.length > 0);
+  if (s.length === 0) return R(T([]));
+  const r = s.map((e) => T(e)).reduce((e, n) => ({
+    x: [Math.min(e.x[0], n.x[0]), Math.max(e.x[1], n.x[1])],
+    y: [Math.min(e.y[0], n.y[0]), Math.max(e.y[1], n.y[1])]
+  }));
+  return R(r);
+}, F = (t, s) => t.scaleX === s.scaleX && t.scaleY === s.scaleY && t.translateX === s.translateX && t.translateY === s.translateY && t.skewX === s.skewX && t.skewY === s.skewY, H = (t, s, r) => {
+  t.setTransform(2, 0, 0, 2, 0, 0), t.clearRect(0, 0, s, r);
+}, N = (t, s, r, e) => t >= 0 && t <= r && s >= 0 && s <= e, P = (t) => `${t.x},${t.y}`, U = (t, s) => ({
+  nonHovered: t.filter((r) => !s.has(P(r))),
+  hovered: t.filter((r) => s.has(P(r)))
+}), X = {
+  growth: 2,
+  stroke: "black"
+}, O = {
+  color: "#BDBDBD",
+  opacity: 0.4
+}, v = (t, s, r, e, n, o = X, c) => {
+  const f = c ? c.opacity : s.opacity ?? 1, h = (s.r || 3) + o.growth * n;
+  t.beginPath();
+  const S = k(s.shape, r, e, h);
+  S ? (S.forEach(([g, I], p) => p === 0 ? t.moveTo(g, I) : t.lineTo(g, I)), t.closePath()) : t.arc(r, e, h, 0, Math.PI * 2), t.fillStyle = c ? c.color : s.color ? s.color : "black", t.globalAlpha = f, t.fill(), (n > 0 || s.stroke) && (t.lineWidth = 1, n > 0 ? (t.strokeStyle = o.stroke, t.globalAlpha = f * n) : t.strokeStyle = s.stroke, t.stroke());
 };
 export {
-  Re as default
+  O as DEFAULT_DIM_STYLE,
+  X as DEFAULT_HOVER_STYLE,
+  v as drawCanvasPoint,
+  R as getDomains,
+  T as getPointExtents,
+  q as getShapePoints,
+  k as getShapeVertices,
+  x as getSharedDomains,
+  V as getTicks,
+  w as invertRescaled,
+  L as isPointInLasso,
+  N as isPointVisible,
+  F as isSameTransform,
+  U as partitionPointsByHover,
+  P as pointKey,
+  H as prepareCanvas,
+  Y as rescaleX,
+  d as rescaleY
 };
 //# sourceMappingURL=visualization.es23.js.map

package/dist/visualization.es23.js.map

@@ -1 +1 @@
-{"version":3,"file":"visualization.es23.js","sources":["../src/components/ViolinPlot/singleViolin.tsx"],"sourcesContent":["import { scaleLinear } from '@visx/scale';\nimport { max as d3max } from '@visx/vendor/d3-array';\nimport { curveBasis } from '@visx/curve';\nimport { line } from '@visx/shape';\nimport { range } from '@visx/vendor/d3-array';\nimport React, { useCallback, useMemo } from \"react\";\nimport CrossPlot from \"./crossPlot\";\nimport { calculateBoxStats, scottRule, silvermanRule, kernelDensityEstimator, gaussian, seededRandom } from \"./helpers\";\nimport { ViolinPoint, SingleViolinProps, TooltipData } from \"./types\";\nimport ViolinTooltip from \"./violinTooltip\";\nimport { Portal, useTooltip } from \"@visx/tooltip\";\n\nconst SingleViolin = <T,>({\n    distribution,\n    distIndex,\n    violinProps,\n    crossProps,\n    valueScale,\n    labelScale,\n    offset,\n    labels,\n    disableCrossPlot,\n    disableViolinPlot,\n    horizontal,\n    pointTooltipBody,\n    onViolinClicked,\n    onPointClicked\n}: SingleViolinProps<T>) => {\n\n    const {\n        tooltipData,\n        tooltipLeft,\n        tooltipTop,\n        tooltipOpen,\n        showTooltip,\n        hideTooltip,\n    } = useTooltip<TooltipData<T>>();\n\n    const data = distribution.data.flatMap(d => d.value)\n\n    //get all the stats for the box plot\n    const { min, max, firstQuartile, thirdQuartile, median, outliers } = calculateBoxStats(data, crossProps?.outliers ?? \"all\");\n\n    const outlierPoints: ViolinPoint<T>[] = distribution.data\n        .filter(d => outliers.includes(d.value))\n        .map(d => ({\n            ...d,\n            outlier: true\n        }));\n    const pointsNoOutliers: ViolinPoint<T>[] = distribution.data.filter(d => !outliers.includes(d.value))\n\n    const violinData = useMemo(() => {\n        const step = (max - min) / Math.max(100, data.length);\n        const ticks = range(min, max, step);\n\n        //bandwidth / binwidth for smoothing, based on user input\n        const bandwidth = typeof violinProps?.bandwidth === \"number\"\n            ? violinProps.bandwidth\n            : typeof violinProps?.bandwidth === \"function\"\n                ? violinProps.bandwidth(data)\n                : violinProps?.bandwidth === \"scott\"\n                    ? scottRule(data)\n                    : silvermanRule(data);\n\n        const kde = kernelDensityEstimator(gaussian(bandwidth), ticks);\n\n        const densityData = kde(data);\n\n        return [...densityData].sort((a, b) => a.value - b.value)\n    }, [data, max, min, violinProps])\n\n    const violinWidth = Math.min(labelScale.bandwidth(), 50);\n    const boxWidth = crossProps?.medianWidth ?? violinWidth * .25;\n\n    const violinTooltip: TooltipData<T> = useMemo(() => ({\n        label: distribution.label,\n        sampleSize: distribution.data.length,\n        median: median.toFixed(2),\n        firstQuartile: firstQuartile.toFixed(2),\n        thirdQuartile: thirdQuartile.toFixed(2)\n    }), [distribution.label, distribution.data.length, median, firstQuartile, thirdQuartile]);\n\n    const handleMouseMove = useCallback((event: React.MouseEvent<SVGPathElement>, data: TooltipData<T>, point?: ViolinPoint<T>) => {\n        showTooltip({\n            tooltipData: point && pointTooltipBody ? { point: point } : data,\n            tooltipLeft: event.pageX,\n            tooltipTop: event.pageY,\n        });\n    }, [pointTooltipBody, showTooltip]);\n\n    const handleViolinClick = () => {\n        if (!onViolinClicked || !tooltipData) return;\n\n        if (tooltipData) {\n            onViolinClicked(distribution);\n        }\n    };\n\n    const handlePointClick = (point: ViolinPoint<T>) => {\n        if (!onPointClicked || !tooltipData) return;\n\n        if (tooltipData) {\n            onPointClicked(point);\n        }\n    };\n\n    //center of each Violin\n    const violinCenter = horizontal ? (labelScale(labels[distIndex]) ?? 0) + violinWidth / 2 : (labelScale(labels[distIndex]) ?? 0) + offset + labelScale.bandwidth() / 2;\n    const widthScale = scaleLinear()\n        .domain([0, d3max(violinData, d => Math.abs(d.count)) || 1])\n        .range([0, violinWidth / 2]);\n\n    //filter out nan values if any\n    const filteredData = violinData.filter(d => d && d.count != null && d.value != null);\n\n    //mirror the data so that both sides are drawn\n    let points = [\n        ...filteredData.map(d => ({\n            x: violinCenter + (widthScale(d.count) as number),\n            y: valueScale(d.value),\n        })),\n        ...filteredData.slice().reverse().map(d => ({\n            x: violinCenter - (widthScale(d.count) as number),\n            y: valueScale(d.value),\n        }))\n    ];\n\n    // close the path at the second point instead of the first since points 0,1 are closer together\n    if (points.length > 2) {\n        const modifiedPoints = points.slice(1);\n        modifiedPoints.push(points[0]);\n        modifiedPoints.push(points[1]);\n        points = modifiedPoints;\n    }\n\n    const violinPath = line<{ x: number; y: number }>()\n        .x(d => horizontal ? d.y : d.x)\n        .y(d => horizontal ? d.x : d.y)\n        .curve(curveBasis)(points) ?? null;\n\n    return (\n        <React.Fragment key={`frag-${distIndex}`}>\n            {\n                //display plots if enough data provided\n                <g\n                    key={`group-${distIndex}`}\n                    onMouseLeave={hideTooltip}\n                    transform={horizontal ? `translate(${offset}, 0)` : `translate(0, 0)`}\n                >\n                    {distribution.data.length >= (violinProps?.pointDisplayThreshold ?? 3) && !disableViolinPlot && violinPath && (\n                        <>\n                            <path\n                                d={violinPath}\n                                fill={distribution.violinColor ?? 'none'}\n                                fillOpacity={distribution.opacity ?? 0.3}\n                                stroke={distribution.violinColor ?? 'black'}\n                                strokeOpacity={distribution.opacity ?? 1}\n                                strokeWidth={\n                                    tooltipData === violinTooltip\n                                        ? (violinProps?.stroke ?? 1) + 1\n                                        : violinProps?.stroke ?? 1\n                                }\n                                pointerEvents=\"all\"\n                                onMouseMove={(e) => handleMouseMove(e, violinTooltip)}\n                                onClick={handleViolinClick}\n                            />\n                        </>\n                    )\n                    }\n                    {distribution.data.length >= (violinProps?.pointDisplayThreshold ?? 3) && !disableCrossPlot &&\n                        <CrossPlot\n                            crossProps={crossProps}\n                            left={horizontal ? 0 : violinCenter}\n                            top={horizontal ? violinCenter : 0}\n                            median={median}\n                            firstQuartile={firstQuartile}\n                            thirdQuartile={thirdQuartile}\n                            valueScale={valueScale}\n                            medianWidth={boxWidth}\n                            tooltipData={tooltipData ?? {}}\n                            handleMouseMove={handleMouseMove}\n                            handleCrossClick={handleViolinClick}\n                            disableViolinPlot={disableViolinPlot}\n                            tooltip={violinTooltip}\n                            horizontal={horizontal}\n                        />\n                    }\n                    {/* Outliers */}\n                    {outlierPoints.map((outlier, index) => {\n                        const vertcy = valueScale(outlier.value);\n                        const horizoncx = valueScale(outlier.value)\n                        const cx = horizontal ? horizoncx : violinCenter\n                        const cy = horizontal ? violinCenter : vertcy\n\n                        const pointTooltip = {\n                            outlier: true,\n                            label: distribution.label,\n                            value: outlier.value.toFixed(2),\n                        };\n\n                        const isHighlighted = pointTooltipBody\n                            ? tooltipData?.point === outlier :\n                            tooltipData?.label === pointTooltip.label &&\n                            tooltipData?.value === pointTooltip.value;\n\n                        const radius = outlier.radius ?? 4\n\n                        return (\n                            <circle\n                                key={`outlier-${index}`}\n                                cx={cx}\n                                cy={cy}\n                                r={isHighlighted ? radius + 1 : radius}\n                                stroke={isHighlighted ? \"#000000\" : (outlier.stroke ?? \"none\")}\n                                fill={outlier.color ?? distribution.violinColor ?? \"#000000\"}\n                                opacity={outlier.opacity ?? distribution.opacity ?? 1}\n                                pointerEvents=\"all\"\n                                onMouseMove={(e) => handleMouseMove(e, pointTooltip, outlier)}\n                                onClick={() => handlePointClick(outlier)}\n                            />\n                        )\n                    })}\n                    {/* show all poionts for each distribution */}\n                    {distribution.data.length >= (violinProps?.pointDisplayThreshold ?? 3) && violinProps?.showAllPoints &&\n                        pointsNoOutliers.map((point: ViolinPoint<T>, index: number) => {\n\n                            const vertcy = valueScale(point.value);\n                            const horizoncx = valueScale(point.value)\n\n                            const jitterAmount = violinProps?.jitter ?? 0;\n                            const seed = `${distribution.label}-${point}-${index}`;\n                            const jitterX = jitterAmount > 0\n                                ? (seededRandom(seed) - 0.5) * 2 * jitterAmount\n                                : 0;\n\n                            const cx = horizontal ? horizoncx : violinCenter + jitterX;\n                            const cy = horizontal ? violinCenter + jitterX : vertcy\n\n                            const pointTooltip = {\n                                label: distribution.label,\n                                value: point.value.toFixed(2),\n                            };\n\n                            const isHighlighted = pointTooltipBody\n                                ? tooltipData?.point === point :\n                                tooltipData?.label === pointTooltip.label &&\n                                tooltipData?.value === pointTooltip.value;\n\n                            const r = point.radius ?? 2\n                            const radius = isHighlighted ? r + 1 : r;\n\n                            return (\n                                <path\n                                    key={`${distIndex}-point-${index}`}\n                                    d={`M ${cx},${cy} m -${radius},0 a ${radius},${radius} 0 1,0 ${2 * radius},0 a ${radius},${radius} 0 1,0 -${2 * radius},0`}\n                                    stroke={isHighlighted ? \"black\" : (point.stroke ?? \"none\")}\n                                    fill={point.color ?? distribution.violinColor ?? \"black\"}\n                                    opacity={point.opacity ?? distribution.opacity ?? 1}\n                                    pointerEvents=\"all\"\n                                    onMouseMove={(e) => handleMouseMove(e, pointTooltip, point)}\n                                    onClick={() => handlePointClick(point)}\n                                />\n                            );\n                        })\n                    }\n                    {/* display points if data points are less than threshold (3) */}\n                    {distribution.data.length < (violinProps?.pointDisplayThreshold ?? 3) &&\n                        distribution.data.map((point: ViolinPoint<T>, index: number) => {\n                            const vertcy = valueScale(point.value);\n                            const horizoncx = valueScale(point.value)\n                            const cx = horizontal ? horizoncx : violinCenter\n                            const cy = horizontal ? violinCenter : vertcy\n                            const radius = point.radius ?? 2;\n\n                            const pointTooltip = {\n                                label: distribution.label,\n                                value: point.value.toFixed(2),\n                            };\n\n                            const isHighlighted = pointTooltipBody\n                                ? tooltipData?.point === point :\n                                tooltipData?.label === pointTooltip.label &&\n                                tooltipData?.value === pointTooltip.value;\n\n      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+{"version":3,"file":"visualization.es23.js","sources":["../src/components/ScatterPlot/helpers.ts"],"sourcesContent":["import { ScaleLinear } from \"@visx/vendor/d3-scale\";\nimport { DimStyle, Line, Point, PointShape, TransformMatrix } from \"./types\";\n\n//rescale x and y scales when zooming\n//converts to pixel values before applying transformations\nexport const rescaleX = (scale: ScaleLinear<number, number, never>, translateX: number, scaleX: number) => {\n    const newXDomain = scale\n        .range()\n        .map((r) =>\n            scale.invert(\n                (r - translateX) / scaleX\n            )\n        );\n    return scale.copy().domain(newXDomain);\n};\n\nexport const rescaleY = (scale: ScaleLinear<number, number, never>, translateY: number, scaleY: number) => {\n    const newXDomain = scale\n        .range()\n        .map((r) =>\n            scale.invert(\n                (r - translateY) / scaleY\n            )\n        );\n    return scale.copy().domain(newXDomain);\n};\n\n//Invert a zoom-transformed scale at a pixel position without building a rescaled copy.\n//Equivalent to rescaleX(scale, translate, scaleFactor).invert(pixel) for linear scales, but\n//allocation-free - this runs on every mouse move.\nexport const invertRescaled = (\n    scale: ScaleLinear<number, number, never>,\n    translate: number,\n    scaleFactor: number,\n    pixel: number\n) => scale.invert((pixel - translate) / scaleFactor);\n\n//find all points within the drawn lasso for selection purposes\nexport const isPointInLasso = (point: { x: number; y: number }, lasso: Line): boolean => {\n    let inside = false;\n    //itterate through lasso, j starting at last point (closing the polygon) and taking the value of the previous point on subsequent calls\n    for (let i = 0, j = lasso.length - 1; i < lasso.length; j = i++) {\n        const xi = lasso[i].x, yi = lasso[i].y; //current vertex\n        const xj = lasso[j].x, yj = lasso[j].y; //previous vertex\n\n        //ray tracing using imaginary horizontal ray coming from the point extending to the right\n        const intersect = ((yi > point.y) !== (yj > point.y)) && //does the ray intersect the line segment from the current to the previous vertex?\n            (point.x < (xj - xi) * (point.y - yi) / (yj - yi) + xi); //is the point to the left of the segment?\n        if (intersect) inside = !inside; //toggles everytime the ray intersects the lasso, if twice it will go back to false since it crossed the lasso twice\n        //if the ray crosses the lasso an even amount of times -> outside, odd -> inside\n    }\n    return inside;\n};\n\nexport const getTicks = (\n    scale: ScaleLinear<number, number, never>,\n    total = 5 // total ticks including endpoints\n) => {\n    const [min, max] = scale.domain();\n    if (total < 2) return [min, max];\n\n    const step = (max - min) / (total - 1);\n    return Array.from({ length: total }, (_, i) => parseFloat((min + i * step).toPrecision(10)));\n};\n\n/**\n * Each shape is sized to cover the same area as a circle of the same `r`, rather than to the same\n * width. Without that, a shape encoding doubles as an unintended size encoding - an equilateral\n * triangle drawn to a circle's radius carries about 40% of its ink, so one category reads as\n * consistently fainter than another for no reason present in the data.\n *\n * Each constant below solves `area(shape) = πr²` for that shape's defining dimension:\n *\n *   square    half-side h,       4h² = πr²           ->  h = √π / 2        ≈ 0.886\n *   triangle  circumradius R,    (3√3/4)R² = πr²     ->  R = √(4π/3√3)    ≈ 1.555\n *   cross     half-span a, arms a/3 wide, (20/9)a² = πr²  ->  a = √(9π/20) ≈ 1.189\n *\n * The diamond, the inverted triangle and the X need no constants of their own: each is a\n * rotation or a reflection of one of the above, and neither operation changes area.\n */\nconst SQUARE_HALF_SIDE = Math.sqrt(Math.PI) / 2;\nconst TRIANGLE_CIRCUMRADIUS = Math.sqrt((4 * Math.PI) / (3 * Math.sqrt(3)));\nconst CROSS_HALF_SPAN = Math.sqrt((9 * Math.PI) / 20);\nconst CROSS_HALF_WIDTH = CROSS_HALF_SPAN / 3;\n\ntype UnitVertices = readonly (readonly [number, number])[];\n\n/** Apex up, the three vertices sitting on the circumscribed circle. */\nconst TRIANGLE_VERTICES: UnitVertices = [\n    [0, -TRIANGLE_CIRCUMRADIUS],\n    [(TRIANGLE_CIRCUMRADIUS * Math.sqrt(3)) / 2, TRIANGLE_CIRCUMRADIUS / 2],\n    [-(TRIANGLE_CIRCUMRADIUS * Math.sqrt(3)) / 2, TRIANGLE_CIRCUMRADIUS / 2],\n];\n\nconst SQUARE_VERTICES: UnitVertices = [\n    [-SQUARE_HALF_SIDE, -SQUARE_HALF_SIDE],\n    [SQUARE_HALF_SIDE, -SQUARE_HALF_SIDE],\n    [SQUARE_HALF_SIDE, SQUARE_HALF_SIDE],\n    [-SQUARE_HALF_SIDE, SQUARE_HALF_SIDE],\n];\n\n/** A plus sign, traced clockwise from the top-left corner of the upper arm. */\nconst CROSS_VERTICES: UnitVertices = [\n    [-CROSS_HALF_WIDTH, -CROSS_HALF_SPAN],\n    [CROSS_HALF_WIDTH, -CROSS_HALF_SPAN],\n    [CROSS_HALF_WIDTH, -CROSS_HALF_WIDTH],\n    [CROSS_HALF_SPAN, -CROSS_HALF_WIDTH],\n    [CROSS_HALF_SPAN, CROSS_HALF_WIDTH],\n    [CROSS_HALF_WIDTH, CROSS_HALF_WIDTH],\n    [CROSS_HALF_WIDTH, CROSS_HALF_SPAN],\n    [-CROSS_HALF_WIDTH, CROSS_HALF_SPAN],\n    [-CROSS_HALF_WIDTH, CROSS_HALF_WIDTH],\n    [-CROSS_HALF_SPAN, CROSS_HALF_WIDTH],\n    [-CROSS_HALF_SPAN, -CROSS_HALF_WIDTH],\n    [-CROSS_HALF_WIDTH, -CROSS_HALF_WIDTH],\n];\n\n/** Turns a vertex list about the origin. Area is unchanged, so the normalisation carries over. */\nconst rotate = (vertices: UnitVertices, radians: number): UnitVertices => {\n    const cos = Math.cos(radians);\n    const sin = Math.sin(radians);\n    return vertices.map(([x, y]) => [x * cos - y * sin, x * sin + y * cos]);\n};\n\n/** Mirrors a vertex list about the x axis, which likewise leaves area alone. */\nconst flipVertically = (vertices: UnitVertices): UnitVertices => vertices.map(([x, y]) => [x, -y]);\n\n/**\n * Vertices of each shape at r = 1, centred on the origin, in the y-down coordinates both canvas\n * and SVG use - so one set of vertices drives both renderers and they cannot drift apart.\n */\nconst UNIT_VERTICES: Record<Exclude<PointShape, \"circle\">, UnitVertices> = {\n    triangle: TRIANGLE_VERTICES,\n    triangleDown: flipVertically(TRIANGLE_VERTICES),\n    square: SQUARE_VERTICES,\n    // A square stood on its corner - which is exactly the half-diagonal √(π/2) the area solves to.\n    diamond: rotate(SQUARE_VERTICES, Math.PI / 4),\n    cross: CROSS_VERTICES,\n    x: rotate(CROSS_VERTICES, Math.PI / 4),\n};\n\n/**\n * The polygon a shape is drawn as, centred on (cx, cy) at radius r, or null for a circle - which\n * has no vertices and is drawn as an arc by whichever renderer asked.\n */\nexport const getShapeVertices = (\n    shape: PointShape | undefined,\n    cx: number,\n    cy: number,\n    r: number\n): [number, number][] | null => {\n    if (!shape || shape === \"circle\") return null;\n    // Guards an unknown shape from a JS caller, which would otherwise throw rather than degrade.\n    const unit = UNIT_VERTICES[shape];\n    if (!unit) return null;\n    return unit.map(([x, y]) => [cx + x * r, cy + y * r]);\n};\n\n/** The same polygon as an SVG `points` string, or null for a circle. */\nexport const getShapePoints = (shape: PointShape | undefined, cx: number, cy: number, r: number) => {\n    const vertices = getShapeVertices(shape, cx, cy, r);\n    return vertices ? vertices.map(([x, y]) => `${x},${y}`).join(\" \") : null;\n};\n\nexport const getPointExtents = <T extends object>(pointData: Point<T>[]) => {\n    if (pointData.length === 0) {\n        return {\n            x: [0, 1] as [number, number],\n            y: [0, 1] as [number, number],\n        };\n    }\n\n    let minX = pointData[0].x;\n    let maxX = pointData[0].x;\n    let minY = pointData[0].y;\n    let maxY = pointData[0].y;\n\n    for (const point of pointData) {\n        if (point.x < minX) minX = point.x;\n        if (point.x > maxX) maxX = point.x;\n        if (point.y < minY) minY = point.y;\n        if (point.y > maxY) maxY = point.y;\n    }\n\n    return {\n        x: [minX, maxX] as [number, number],\n        y: [minY, maxY] as [number, number],\n    };\n};\n\n/**\n * Fraction of an axis' data range padded onto each side, so points never sit exactly on the\n * axis line. A fraction rather than a fixed amount because these plots carry everything from\n * genomic coordinates in the millions to PCA components around 1e-2, and any one constant\n * either vanishes against the former or swamps the latter.\n */\nconst DOMAIN_PADDING_FRACTION = 0.05;\n\n/**\n * Pads one axis' extent. A zero range - every point sharing a coordinate, or a single point -\n * leaves no range to take a fraction of, so the pad falls back to the magnitude of the value\n * itself, and to 1 at the origin where there is no magnitude either.\n */\nconst padExtent = ([min, max]: [number, number]): [number, number] => {\n    const spread = max - min;\n    const pad = (spread > 0 ? spread : Math.abs(max) || 1) * DOMAIN_PADDING_FRACTION;\n    return [min - pad, max + pad];\n};\n\nexport const getDomains = (extents: { x: [number, number]; y: [number, number] }) => ({\n    xDomain: padExtent(extents.x),\n    yDomain: padExtent(extents.y),\n});\n\n/**\n * Domains covering every given set of points, for plots that share a coordinate space and so\n * need to share a coordinate frame - pass the result to each plot's xDomain/yDomain so a given\n * coordinate lands on the same pixel in all of them.\n *\n * Memoize the result: passing a fresh array on every render rebuilds each plot's scales.\n */\nexport const getSharedDomains = (...pointDataSets: readonly { x: number; y: number }[][]) => {\n    const populated = pointDataSets.filter((points) => points.length > 0);\n    if (populated.length === 0) return getDomains(getPointExtents([]));\n\n    const merged = populated\n        .map((points) => getPointExtents(points))\n        .reduce((combined, extents) => ({\n            x: [Math.min(combined.x[0], extents.x[0]), Math.max(combined.x[1], extents.x[1])] as [number, number],\n            y: [Math.min(combined.y[0], extents.y[0]), Math.max(combined.y[1], extents.y[1])] as [number, number],\n        }));\n\n    return getDomains(merged);\n};\n\n/**\n * Value comparison for transform matrices. Reference comparison is not enough once a matrix can\n * come from outside the component (a shared zoom, a restored view) rather than only from visx.\n */\nexport const isSameTransform = (a: TransformMatrix, b: TransformMatrix) => (\n    a.scaleX === b.scaleX &&\n    a.scaleY === b.scaleY &&\n    a.translateX === b.translateX &&\n    a.translateY === b.translateY &&\n    a.skewX === b.skewX &&\n    a.skewY === b.skewY\n);\n\nexport const prepareCanvas = (\n    context: CanvasRenderingContext2D,\n    width: number,\n    height: number\n) => {\n    context.setTransform(2, 0, 0, 2, 0, 0);\n    context.clearRect(0, 0, width, height);\n};\n\nexport const isPointVisible = (\n    x: number,\n    y: number,\n    width: number,\n    height: number\n) => (\n    x >= 0 &&\n    x <= width &&\n    y >= 0 &&\n    y <= height\n);\n\n/** Identifies a point by its position, which is what hover tracks it by. */\nexport const pointKey = (point: { x: number; y: number }) => `${point.x},${point.y}`;\n\nexport const partitionPointsByHover = <T extends object>(\n    pointData: Point<T>[],\n    hoveredPointKeys: Set<string>\n) => ({\n    nonHovered: pointData.filter((point) => !hoveredPointKeys.has(pointKey(point))),\n    hovered: pointData.filter((point) => hoveredPointKeys.has(pointKey(point))),\n});\n\n/** How a hovered point is set apart from the rest. */\nexport type HoverStyle = {\n    /** Radius added at full hover, in pixels. */\n    growth: number;\n    /** Color of the ring drawn around a hovered point. */\n    stroke: string;\n};\n\nexport const DEFAULT_HOVER_STYLE: HoverStyle = { growth: 2, stroke: \"black\" };\n\n/** Pale enough to read as background, and translucent so dense patches still show their shape. */\nexport const DEFAULT_DIM_STYLE: DimStyle = { color: \"#BDBDBD\", opacity: 0.4 };\n\nexport const drawCanvasPoint = <T extends object>(\n    context: CanvasRenderingContext2D,\n    point: Point<T>,\n    x: number,\n    y: number,\n    /** How far into its hover growth this point is: 0 at rest, 1 fully hovered. */\n    hoverAmount: number,\n    hoverStyle: HoverStyle = DEFAULT_HOVER_STYLE,\n    /** Draws the point dimmed, in this color and opacity rather than its own. */\n    dim?: DimStyle\n) => {\n    const opacity = dim ? dim.opacity : point.opacity ?? 1;\n    const size = (point.r || 3) + hoverStyle.growth * hoverAmount;\n    context.beginPath();\n\n    const vertices = getShapeVertices(point.shape, x, y, size);\n    if (vertices) {\n        vertices.forEach(([vx, vy], index) => (index === 0 ? context.moveTo(vx, vy) : context.lineTo(vx, vy)));\n        context.closePath();\n    } else {\n        context.arc(x, y, size, 0, Math.PI * 2);\n    }\n\n    context.fillStyle = dim ? dim.color : point.color ? point.color : \"black\";\n    context.globalAlpha = opacity;\n    context.fill();\n\n    if (hoverAmount > 0 || point.stroke) {\n        context.lineWidth = 1;\n        if (hoverAmount > 0) {\n            // Fade the hover ring in alongside the growth. 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package/dist/visualization.es230.js

@@ -1,7 +1,26 @@
-function s(r, e) {
-  r(e);
+import { jsx as s } from "react/jsx-runtime";
+function f(e) {
+  let {
+    flex: l = "1",
+    label: t,
+    margin: n = "5px 0",
+    align: a = "left",
+    children: i,
+    ...r
+  } = e;
+  return /* @__PURE__ */ s("div", {
+    className: "visx-legend-label",
+    style: {
+      justifyContent: a,
+      display: "flex",
+      flex: l,
+      margin: n
+    },
+    ...r,
+    children: i || t
+  });
 }
 export {
-  s as default
+  f as default
 };
 //# sourceMappingURL=visualization.es230.js.map

package/dist/visualization.es230.js.map

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package/dist/visualization.es231.js

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-import L from "./visualization.es74.js";
-import { required as R } from "./visualization.es530.js";
-import g, { constantZero as p } from "./visualization.es531.js";
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-  }
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-  }, t.tile = function(n) {
-    return arguments.length ? (f = R(n), t) : f;
-  }, t.padding = function(n) {
-    return arguments.length ? t.paddingInner(n).paddingOuter(n) : t.paddingInner();
-  }, t.paddingInner = function(n) {
-    return arguments.length ? (h = typeof n == "function" ? n : g(+n), t) : h;
-  }, t.paddingOuter = function(n) {
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-  }, t.paddingTop = function(n) {
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-  }, t.paddingLeft = function(n) {
-    return arguments.length ? (B = typeof n == "function" ? n : g(+n), t) : B;
-  }, t;
+import n from "./visualization.es234.js";
+import o from "./visualization.es235.js";
+import { jsx as f } from "react/jsx-runtime";
+function S(h) {
+  let {
+    shape: l = n,
+    width: t,
+    height: a,
+    margin: r,
+    label: i,
+    item: p,
+    itemIndex: s,
+    fill: d,
+    size: e,
+    shapeStyle: m
+  } = h;
+  return /* @__PURE__ */ f("div", {
+    className: "visx-legend-shape",
+    style: {
+      display: "flex",
+      width: e ? e({
+        ...i
+      }) : t,
+      height: e ? e({
+        ...i
+      }) : a,
+      margin: r
+    },
+    children: o({
+      shape: l,
+      item: p,
+      itemIndex: s,
+      label: i,
+      width: t,
+      height: a,
+      fill: d,
+      shapeStyle: m
+    })
+  });
 }
 export {
   S as default

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package/dist/visualization.es232.js

@@ -1,23 +1,11 @@
-import { isSVGElement as s, isSVGGraphicsElement as m, isSVGSVGElement as f } from "./visualization.es233.js";
-import p from "./visualization.es517.js";
-import c from "./visualization.es256.js";
-function G(t, i) {
-  if (!t || !i) return null;
-  const n = p(i), r = s(t) ? t.ownerSVGElement : t, o = m(r) ? r.getScreenCTM() : null;
-  if (f(r) && o) {
-    let e = r.createSVGPoint();
-    return e.x = n.x, e.y = n.y, e = e.matrixTransform(o.inverse()), new c({
-      x: e.x,
-      y: e.y
-    });
-  }
-  const l = t.getBoundingClientRect();
-  return new c({
-    x: n.x - l.left - t.clientLeft,
-    y: n.y - l.top - t.clientTop
-  });
+function t(e) {
+  return e && typeof e == "object" && "value" in e && typeof e.value < "u" ? e.value : e;
+}
+function n(e) {
+  return String(t(e));
 }
 export {
-  G as default
+  t as default,
+  n as valueOrIdentityString
 };
 //# sourceMappingURL=visualization.es232.js.map

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package/dist/visualization.es233.js

@@ -1,31 +1,16 @@
-function t(n) {
-  return !!n && n instanceof Element;
-}
-function i(n) {
-  return !!n && (n instanceof SVGElement || "ownerSVGElement" in n);
-}
-function e(n) {
-  return !!n && "createSVGPoint" in n;
-}
-function r(n) {
-  return !!n && "getScreenCTM" in n;
-}
-function c(n) {
-  return !!n && "changedTouches" in n;
-}
-function o(n) {
-  return !!n && "clientX" in n;
-}
-function u(n) {
-  return !!n && (n instanceof Event || "nativeEvent" in n && n.nativeEvent instanceof Event);
+function n(t) {
+  let {
+    scale: l,
+    labelFormat: r
+  } = t;
+  return (a, e) => ({
+    datum: a,
+    index: e,
+    text: `${r(a, e)}`,
+    value: l(a)
+  });
 }
 export {
-  t as isElement,
-  u as isEvent,
-  o as isMouseEvent,
-  i as isSVGElement,
-  r as isSVGGraphicsElement,
-  e as isSVGSVGElement,
-  c as isTouchEvent
+  n as default
 };
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