@weng-lab/visualization 2.4.0-beta.5 → 2.4.0-beta.7

package/dist/visualization.es119.js

@@ -1,35 +1,29 @@
-import { jsx as u } from "react/jsx-runtime";
-import { c as S } from "react/compiler-runtime";
-import { getAnimationProps as T } from "./visualization.es24.js";
-import { getTrianglePoints as A } from "./visualization.es17.js";
-import { motion as W } from "./visualization.es42.js";
-const G = (k) => {
-  const o = S(19), {
-    pointData: g,
-    animation: e,
-    animationGroupSize: a,
-    animationBuffer: i,
-    xScaleTransformed: n,
-    yScaleTransformed: s,
-    boundedWidth: c,
-    boundedHeight: l
-  } = k;
-  let t;
-  if (o[0] !== e || o[1] !== i || o[2] !== a || o[3] !== l || o[4] !== c || o[5] !== g || o[6] !== n || o[7] !== s) {
-    let f;
-    o[9] !== e || o[10] !== i || o[11] !== a || o[12] !== l || o[13] !== c || o[14] !== n || o[15] !== s ? (f = (r, y) => {
-      const x = W.g, b = Math.floor(y / (a ?? 1)), P = T(e, b, i ?? 0.03), p = n(r.x), d = s(r.y);
-      if (p < 0 || p > c || d < 0 || d > l)
-        return null;
-      const h = r.r ?? 3;
-      return /* @__PURE__ */ u(x, { ...P, children: r.shape === "triangle" ? /* @__PURE__ */ u("polygon", { points: A(p, d, h), fill: r.color ?? "black", stroke: r.stroke, opacity: r.opacity ?? 1 }) : /* @__PURE__ */ u("circle", { cx: p, cy: d, r: h, fill: r.color ?? "black", stroke: r.stroke, opacity: r.opacity ?? 1 }) }, `pt-${y}`);
-    }, o[9] = e, o[10] = i, o[11] = a, o[12] = l, o[13] = c, o[14] = n, o[15] = s, o[16] = f) : f = o[16], t = g.map(f), o[0] = e, o[1] = i, o[2] = a, o[3] = l, o[4] = c, o[5] = g, o[6] = n, o[7] = s, o[8] = t;
-  } else
-    t = o[8];
-  let m;
-  return o[17] !== t ? (m = /* @__PURE__ */ u("g", { children: t }), o[17] = t, o[18] = m) : m = o[18], m;
-};
+import { jsx as u, jsxs as k } from "react/jsx-runtime";
+import { c as g } from "react/compiler-runtime";
+import { memo as j } from "react";
+import O from "./visualization.es33.js";
+const F = j(function(L) {
+  const t = g(16), {
+    nodeX: N,
+    color: e,
+    baseNodeX: f,
+    baseNodeY: i,
+    label: a,
+    fontSize: n,
+    fontFamily: c,
+    strokeWidth: m
+  } = L, s = N * 180 / Math.PI - 90, d = s > 90 || s < -90, $ = d ? s + 180 : s, p = d ? "end" : "start", x = d ? -6 : 6, b = `rotate(${$}) translate(0, ${(n ?? 2.4) / 3})`, h = a === "Human" ? `${a} ★★★` : a;
+  let o;
+  t[0] !== e || t[1] !== c || t[2] !== n || t[3] !== m || t[4] !== b || t[5] !== h || t[6] !== p || t[7] !== x ? (o = /* @__PURE__ */ u("text", { fontSize: n, fontFamily: c, fill: e, stroke: e, strokeWidth: m, paintOrder: "stroke", transform: b, textAnchor: p, x, children: h }), t[0] = e, t[1] = c, t[2] = n, t[3] = m, t[4] = b, t[5] = h, t[6] = p, t[7] = x, t[8] = o) : o = t[8];
+  let r;
+  t[9] !== e ? (r = /* @__PURE__ */ u("circle", { r: 1.5, fill: e }), t[9] = e, t[10] = r) : r = t[10];
+  let l;
+  return t[11] !== f || t[12] !== i || t[13] !== o || t[14] !== r ? (l = /* @__PURE__ */ k(O, { top: i, left: f, children: [
+    o,
+    r
+  ] }), t[11] = f, t[12] = i, t[13] = o, t[14] = r, t[15] = l) : l = t[15], l;
+});
 export {
-  G as default
+  F as LeafNodeLabel
 };
 //# sourceMappingURL=visualization.es119.js.map

package/dist/visualization.es119.js.map

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+{"version":3,"file":"visualization.es119.js","sources":["../src/components/PhyloTree/LeafNodeLabel.tsx"],"sourcesContent":["import { PhyloTreeProps, TreeNode } from \"./types\";\nimport { Group } from \"@visx/group\";\nimport { memo } from \"react\";\n\n\nexport type LeafNodeLabelProps = {\n  // node.x is the angle the node is at in radial layout while base/scaled are true x/y position in svg\n  nodeX: number;\n  baseNodeX: TreeNode[\"baseNodeX\"];\n  baseNodeY: TreeNode[\"baseNodeY\"];\n  label: TreeNode[\"label\"];\n  color: TreeNode[\"color\"];\n  fontSize: PhyloTreeProps[\"leafFontSize\"];\n  fontFamily: PhyloTreeProps[\"leafFontFamily\"];\n  strokeWidth: TreeNode[\"labelStrokeWidth\"]\n};\n\nexport const LeafNodeLabel = memo(function LeafNodeLabel({\n  nodeX,\n  color,\n  baseNodeX,\n  baseNodeY,\n  label,\n  fontSize,\n  fontFamily,\n  strokeWidth\n}: LeafNodeLabelProps) {\n  const angleDeg = (nodeX * 180) / Math.PI - 90;\n  const flip = angleDeg > 90 || angleDeg < -90;\n  const rotation = flip ? angleDeg + 180 : angleDeg;\n  const textAnchor: \"start\" | \"end\" = flip ? \"end\" : \"start\";\n  const xOffset = flip ? -6 : 6;\n\n  return (\n    <Group\n      top={baseNodeY}\n      left={baseNodeX}\n    >\n      <text\n        fontSize={fontSize}\n        fontFamily={fontFamily}\n        fill={color}\n        stroke={color}\n        strokeWidth={strokeWidth}\n        paintOrder=\"stroke\"\n        transform={`rotate(${rotation}) translate(0, ${(fontSize ?? 2.4) / 3})`}\n        textAnchor={textAnchor}\n        x={xOffset}\n      >\n        {label === \"Human\" ? `${label} \\u2605\\u2605\\u2605` : label}\n      </text>\n      <circle\n        r={1.5}\n        fill={color}\n      />\n    </Group>\n  );\n});\n"],"names":["LeafNodeLabel","memo","t0","$","_c","nodeX","color","baseNodeX","baseNodeY","label","fontSize","fontFamily","strokeWidth","angleDeg","Math","PI","flip","rotation","textAnchor","xOffset","t1","t2","t3","t4","jsx","t5","jsxs","Group"],"mappings":";;;;AAiBO,MAAMA,IAAgBC,EAAK,SAAAC,GAAA;AAAA,QAAAC,IAAAC,EAAA,EAAA,GAAuB;AAAA,IAAAC,OAAAA;AAAAA,IAAAC,OAAAA;AAAAA,IAAAC,WAAAA;AAAAA,IAAAC,WAAAA;AAAAA,IAAAC,OAAAA;AAAAA,IAAAC,UAAAA;AAAAA,IAAAC,YAAAA;AAAAA,IAAAC,aAAAA;AAAAA,EAAAA,IAAAV,GAUvDW,IAAkBR,IAAQ,MAAOS,KAAIC,KAAM,IAC3CC,IAAaH,IAAW,MAAMA,IAAW,KACzCI,IAAiBD,IAAOH,IAAW,MAAlBA,GACjBK,IAAoCF,IAAA,QAAA,SACpCG,IAAgBH,IAAA,KAAA,GAcCI,IAAA,UAAUH,CAAQ,mBAAmBP,KAAA,OAAmB,CAAC,KAInEW,IAAAZ,MAAU,UAAV,GAAuBA,CAAK,SAA5BA;AAAyD,MAAAa;AAAA,EAAAnB,EAAA,CAAA,MAAAG,KAAAH,EAAA,CAAA,MAAAQ,KAAAR,EAAA,CAAA,MAAAO,KAAAP,EAAA,CAAA,MAAAS,KAAAT,EAAA,CAAA,MAAAiB,KAAAjB,EAAA,CAAA,MAAAkB,KAAAlB,EAAA,CAAA,MAAAe,KAAAf,SAAAgB,KAX5DG,sBAAA,QAAA,EACYZ,UAAAA,GACEC,YAAAA,GACNL,MAAAA,GACEA,QAAAA,GACKM,aAAAA,GACF,YAAA,UACA,WAAAQ,GACCF,YAAAA,GACTC,GAEFE,UAAAA,GACH,GAAOlB,OAAAG,GAAAH,OAAAQ,GAAAR,OAAAO,GAAAP,OAAAS,GAAAT,OAAAiB,GAAAjB,OAAAkB,GAAAlB,OAAAe,GAAAf,OAAAgB,GAAAhB,OAAAmB,KAAAA,IAAAnB,EAAA,CAAA;AAAA,MAAAoB;AAAA,EAAApB,SAAAG,KACPiB,IAAA,gBAAAC,EAAA,UAAA,EACK,GAAA,KACGlB,MAAAA,GAAK,GACXH,OAAAG,GAAAH,QAAAoB,KAAAA,IAAApB,EAAA,EAAA;AAAA,MAAAsB;AAAA,SAAAtB,EAAA,EAAA,MAAAI,KAAAJ,EAAA,EAAA,MAAAK,KAAAL,EAAA,EAAA,MAAAmB,KAAAnB,UAAAoB,KApBJE,IAAA,gBAAAC,EAACC,GAAA,EACMnB,KAAAA,GACCD,SAENe,UAAAA;AAAAA,IAAAA;AAAAA,IAaAC;AAAAA,EAAAA,GAIF,GAAQpB,QAAAI,GAAAJ,QAAAK,GAAAL,QAAAmB,GAAAnB,QAAAoB,GAAApB,QAAAsB,KAAAA,IAAAtB,EAAA,EAAA,GArBRsB;AAqBQ,CAEX;"}

package/dist/visualization.es12.js

@@ -1,8 +1,8 @@
 import { jsx as m } from "react/jsx-runtime";
 import { c as S } from "react/compiler-runtime";
 import { memo as T, useState as P, useImperativeHandle as b } from "react";
-import g from "./visualization.es21.js";
-import x from "./visualization.es22.js";
+import g from "./visualization.es81.js";
+import x from "./visualization.es83.js";
 const c = 10;
 function y(l) {
   const t = S(10), {

package/dist/visualization.es120.js

@@ -1,48 +1,67 @@
-import { jsxs as E, jsx as b } from "react/jsx-runtime";
-import { c as $ } from "react/compiler-runtime";
-import v from "./visualization.es29.js";
-const H = (u) => {
-  const t = $(15), {
-    pointData: x,
-    xScaleTransformed: a,
-    yScaleTransformed: f,
-    boundedWidth: n,
-    boundedHeight: l,
-    margin: o
-  } = u;
-  if (!x.some(z))
-    return null;
-  const T = o.top, j = o.left;
-  let s;
-  if (t[0] !== l || t[1] !== n || t[2] !== x || t[3] !== a || t[4] !== f) {
-    let m;
-    t[6] !== l || t[7] !== n || t[8] !== a || t[9] !== f ? (m = (r, k) => {
-      if (!r.label)
-        return null;
-      const c = a(r.x), i = f(r.y);
-      if (c < 0 || c > n || i < 0 || i > l)
-        return null;
-      const p = r.label.length * 7, y = r.r ?? 3, g = Math.atan2(i - l / 2, c - n / 2);
-      let e = Math.cos(g), d = Math.sin(g);
-      const W = c + e * 15, A = e >= 0 ? W + 4 + p : W - 4 - p;
-      (A > n || A < 0) && (e = -e);
-      const M = i + d * 15;
-      (M < 0 || M > l) && (d = -d);
-      const R = c + e * 15, S = i + d * 15, w = e >= 0 ? "start" : "end";
-      return /* @__PURE__ */ E("g", { pointerEvents: "none", children: [
-        /* @__PURE__ */ b("line", { x1: c + e * y, y1: i + d * y, x2: R, y2: S, stroke: "#555", strokeWidth: 1 }),
-        /* @__PURE__ */ b("text", { x: R + (e >= 0 ? 4 : -4), y: S, textAnchor: w, dominantBaseline: "middle", fontSize: 11, fontWeight: "bold", fill: "#1c1917", children: r.label })
-      ] }, `lbl-${k}`);
-    }, t[6] = l, t[7] = n, t[8] = a, t[9] = f, t[10] = m) : m = t[10], s = x.map(m), t[0] = l, t[1] = n, t[2] = x, t[3] = a, t[4] = f, t[5] = s;
-  } else
-    s = t[5];
-  let h;
-  return t[11] !== o.left || t[12] !== o.top || t[13] !== s ? (h = /* @__PURE__ */ b(v, { top: T, left: j, children: s }), t[11] = o.left, t[12] = o.top, t[13] = s, t[14] = h) : h = t[14], h;
-};
-function z(u) {
-  return u.label;
+import G from "./visualization.es128.js";
+import { jsx as o, Fragment as O } from "react/jsx-runtime";
+import P from "./visualization.es33.js";
+function k(s) {
+  let {
+    className: h,
+    top: m,
+    left: n,
+    data: u = [],
+    binWidth: f = 6,
+    binHeight: x = 6,
+    x0: d = 0,
+    gap: a = 1,
+    xScale: y,
+    yScale: g,
+    colorScale: S = () => {
+    },
+    opacityScale: w = () => 1,
+    bins: N = (e) => e?.bins,
+    // eslint-disable-line @typescript-eslint/no-explicit-any
+    count: v = (e) => e?.count,
+    // eslint-disable-line @typescript-eslint/no-explicit-any
+    children: r,
+    ...H
+  } = s;
+  const $ = f - a, j = x - a, l = u.map((e, t) => {
+    const F = y(t);
+    return N(e).map((i, p) => {
+      const c = v(i);
+      return {
+        bin: i,
+        row: p,
+        column: t,
+        datum: e,
+        width: $,
+        height: j,
+        gap: a,
+        count: c,
+        x: F + d,
+        y: g(p) + a,
+        color: S(c),
+        opacity: w(c)
+      };
+    });
+  });
+  return r ? /* @__PURE__ */ o(O, {
+    children: r(l)
+  }) : /* @__PURE__ */ o(P, {
+    className: "visx-heatmap-rects",
+    top: m,
+    left: n,
+    children: l.map((e) => e.map((t) => /* @__PURE__ */ o("rect", {
+      className: G("visx-heatmap-rect", h),
+      width: t.width,
+      height: t.height,
+      x: t.x,
+      y: t.y,
+      fill: t.color,
+      fillOpacity: t.opacity,
+      ...H
+    }, `heatmap-tile-rect-${t.row}-${t.column}`)))
+  });
 }
 export {
-  H as default
+  k as default
 };
 //# sourceMappingURL=visualization.es120.js.map

package/dist/visualization.es120.js.map

@@ -1 +1 @@
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package/dist/visualization.es121.js

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-import { c as D } from "react/compiler-runtime";
-import { useId as E } from "react";
-import J from "./visualization.es41.js";
-import K from "./visualization.es29.js";
-const U = (M) => {
-  const e = D(49), {
-    backgroundGradient: y,
-    boundedHeight: t,
-    barLeft: W,
-    marginTop: _
-  } = M, w = E();
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+import C from "./visualization.es128.js";
+import { jsx as o, Fragment as F } from "react/jsx-runtime";
+import G from "./visualization.es33.js";
+function R(m) {
+  let {
+    className: n,
+    top: u,
+    left: f,
+    data: d = [],
+    gap: t = 1,
+    radius: e = 6,
+    xScale: x,
+    yScale: y,
+    colorScale: h = () => {
+    },
+    opacityScale: S = () => 1,
+    bins: N = (a) => a?.bins,
+    // eslint-disable-line @typescript-eslint/no-explicit-any
+    count: g = (a) => a?.count,
+    // eslint-disable-line @typescript-eslint/no-explicit-any
+    children: l,
+    ...v
+  } = m;
+  const $ = e - t, p = d.map((a, c) => {
+    const j = x(c);
+    return N(a).map((i, s) => {
+      const r = g(i);
+      return {
+        bin: i,
+        row: s,
+        column: c,
+        datum: a,
+        radius: e,
+        gap: t,
+        count: r,
+        cx: e + j,
+        cy: y(s) + t + e,
+        r: $,
+        opacity: S(r),
+        color: h(r)
+      };
+    });
+  });
+  return l ? /* @__PURE__ */ o(F, {
+    children: l(p)
+  }) : /* @__PURE__ */ o(G, {
+    className: "visx-heatmap-circles",
+    top: u,
+    left: f,
+    children: p.map((a) => a.map((c) => /* @__PURE__ */ o("circle", {
+      className: C("visx-heatmap-circle", n),
+      r: c.r,
+      cx: c.cx,
+      cy: c.cy,
+      fill: c.color,
+      fillOpacity: c.opacity,
+      ...v
+    }, `heatmap-tile-circle-${c.row}-${c.column}`)))
+  });
+}
 export {
-  U as default
+  R as default
 };
 //# sourceMappingURL=visualization.es121.js.map

package/dist/visualization.es121.js.map

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package/dist/visualization.es122.js

@@ -1,28 +1,35 @@
-import { jsx as l, jsxs as R, Fragment as y } from "react/jsx-runtime";
-import { c as f } from "react/compiler-runtime";
-const c = "#666", d = 1, S = [2, 2], H = (h) => {
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-    position: x,
-    boundedWidth: e,
-    boundedHeight: o
-  } = h, {
-    x: s,
-    y: n
-  } = x;
-  let r;
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-  let i;
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-  let a;
-  return t[8] !== r || t[9] !== i ? (a = /* @__PURE__ */ R(y, { children: [
-    r,
-    i
-  ] }), t[8] = r, t[9] = i, t[10] = a) : a = t[10], a;
+import { jsx as u } from "react/jsx-runtime";
+import { c as S } from "react/compiler-runtime";
+import { getAnimationProps as T } from "./visualization.es29.js";
+import { getTrianglePoints as A } from "./visualization.es17.js";
+import { motion as W } from "./visualization.es34.js";
+const G = (k) => {
+  const o = S(19), {
+    pointData: g,
+    animation: e,
+    animationGroupSize: a,
+    animationBuffer: i,
+    xScaleTransformed: n,
+    yScaleTransformed: s,
+    boundedWidth: c,
+    boundedHeight: l
+  } = k;
+  let t;
+  if (o[0] !== e || o[1] !== i || o[2] !== a || o[3] !== l || o[4] !== c || o[5] !== g || o[6] !== n || o[7] !== s) {
+    let f;
+    o[9] !== e || o[10] !== i || o[11] !== a || o[12] !== l || o[13] !== c || o[14] !== n || o[15] !== s ? (f = (r, y) => {
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+      if (p < 0 || p > c || d < 0 || d > l)
+        return null;
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+      return /* @__PURE__ */ u(x, { ...P, children: r.shape === "triangle" ? /* @__PURE__ */ u("polygon", { points: A(p, d, h), fill: r.color ?? "black", stroke: r.stroke, opacity: r.opacity ?? 1 }) : /* @__PURE__ */ u("circle", { cx: p, cy: d, r: h, fill: r.color ?? "black", stroke: r.stroke, opacity: r.opacity ?? 1 }) }, `pt-${y}`);
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+  } else
+    t = o[8];
+  let m;
+  return o[17] !== t ? (m = /* @__PURE__ */ u("g", { children: t }), o[17] = t, o[18] = m) : m = o[18], m;
 };
 export {
-  S as CROSSHAIR_DASH,
-  c as CROSSHAIR_STROKE,
-  d as CROSSHAIR_STROKE_WIDTH,
-  H as default
+  G as default
 };
 //# sourceMappingURL=visualization.es122.js.map

package/dist/visualization.es122.js.map

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