@weng-lab/visualization 2.4.0-beta.0 → 2.4.0-beta.2

package/dist/visualization.es115.js.map

@@ -1 +1 @@
-{"version":3,"file":"visualization.es115.js","sources":["../src/components/PhyloTree/ZoomSurface.tsx"],"sourcesContent":["import { localPoint } from \"@visx/event\";\nimport { memo } from \"react\";\n\ntype ZoomSurfaceProps = {\n  dragStart: (event: React.TouchEvent | React.MouseEvent) => void;\n  dragMove: (event: React.TouchEvent | React.MouseEvent) => void;\n  dragEnd: () => void;\n  scale: (args: { scaleX: number; scaleY: number; point?: { x: number; y: number } }) => void;\n  isDragging: boolean;\n};\n\n\n/**\n * rect which catches and handles zoom events\n */\n\nexport const ZoomSurface = memo(\n  ({ dragStart, dragMove, dragEnd, scale, isDragging }: ZoomSurfaceProps) => {\n    return (\n      <rect\n        width=\"100%\"\n        height=\"100%\"\n        fill=\"transparent\"\n        onTouchStart={dragStart}\n        onTouchMove={dragMove}\n        onTouchEnd={dragEnd}\n        onMouseDown={dragStart}\n        onMouseMove={dragMove}\n        onMouseUp={dragEnd}\n        onMouseLeave={() => {\n          if (isDragging) dragEnd();\n        }}\n        onDoubleClick={(event) => {\n          const point = localPoint(event) || { x: 0, y: 0 };\n          scale({ scaleX: 1.5, scaleY: 1.5, point });\n        }}\n      />\n    );\n  }\n);"],"names":["ZoomSurface","memo","t0","$","_c","dragStart","dragMove","dragEnd","scale","isDragging","t1","t2","event","point","localPoint","x","y","scaleX","scaleY","t3","jsx"],"mappings":";;;;AAgBO,MAAMA,IAAcC,EACzBC,CAAAA,MAAA;AAAA,QAAAC,IAAAC,EAAA,EAAA,GAAC;AAAA,IAAAC,WAAAA;AAAAA,IAAAC,UAAAA;AAAAA,IAAAC,SAAAA;AAAAA,IAAAC,OAAAA;AAAAA,IAAAC,YAAAA;AAAAA,EAAAA,IAAAP;AAAqE,MAAAQ;AAAA,EAAAP,EAAA,CAAA,MAAAI,KAAAJ,SAAAM,KAYlDC,IAAAA,MAAA;AACZ,IAAID,KAAYF,EAAAA;AAAAA,EAAU,GAC3BJ,OAAAI,GAAAJ,OAAAM,GAAAN,OAAAO,KAAAA,IAAAP,EAAA,CAAA;AAAA,MAAAQ;AAAA,EAAAR,SAAAK,KACcG,IAAAC,CAAAA,MAAA;AACb,UAAAC,IAAcC,EAAWF,CAAuB,KAAlC;AAAA,MAAAG,GAA0B;AAAA,MAACC,GAAK;AAAA,IAAA;AAC9CR,IAAAA,EAAM;AAAA,MAAAS,QAAU;AAAA,MAAGC,QAAU;AAAA,MAAGL,OAAAA;AAAAA,IAAAA,CAAS;AAAA,EAAC,GAC3CV,OAAAK,GAAAL,OAAAQ,KAAAA,IAAAR,EAAA,CAAA;AAAA,MAAAgB;AAAA,SAAAhB,EAAA,CAAA,MAAAI,KAAAJ,EAAA,CAAA,MAAAG,KAAAH,EAAA,CAAA,MAAAE,KAAAF,EAAA,CAAA,MAAAO,KAAAP,SAAAQ,KAhBHQ,IAAA,gBAAAC,EAAA,UACQ,OAAA,QACC,QAAA,QACF,MAAA,eACSf,cAAAA,GACDC,aAAAA,GACDC,YAAAA,GACCF,aAAAA,GACAC,aAAAA,GACFC,WAAAA,GACG,cAAAG,GAGC,eAAAC,EAAAA,CAGd,GACDR,OAAAI,GAAAJ,OAAAG,GAAAH,OAAAE,GAAAF,OAAAO,GAAAP,OAAAQ,GAAAR,QAAAgB,KAAAA,IAAAhB,EAAA,EAAA,GAjBFgB;AAiBE,CAGR;"}
+{"version":3,"file":"visualization.es115.js","sources":["../src/components/PhyloTree/LeafLinkExtension.tsx"],"sourcesContent":["import { motion } from \"framer-motion\";\nimport { useBranchLengthTransition } from \"./PhyloTree\";\nimport { memo } from \"react\";\nimport { TreeNode } from \"./types\";\n\n\nexport type LeafLinkExtensionProps = {\n  baseLeafLinkExtension: TreeNode[\"baseLeafLinkExtension\"]\n  scaledLeafLinkExtension: TreeNode[\"scaledLeafLinkExtension\"]\n  color: TreeNode[\"color\"];\n  strokeWidth: TreeNode[\"linkStrokeWidth\"]\n  useBranchLengths: boolean\n};\n\nexport const LeafLinkExtension = memo(function LinkExtension({\n  useBranchLengths,\n  color,\n  baseLeafLinkExtension,\n  scaledLeafLinkExtension,\n  strokeWidth\n}: LeafLinkExtensionProps) {\n\n  return (\n    <motion.line\n      strokeWidth={strokeWidth}\n      initial={false}\n      animate={useBranchLengths ? scaledLeafLinkExtension : baseLeafLinkExtension}\n      stroke={color}\n      transition={useBranchLengthTransition}\n    />\n  );\n});\n"],"names":["LeafLinkExtension","memo","useBranchLengths","color","baseLeafLinkExtension","scaledLeafLinkExtension","strokeWidth","jsx","motion","useBranchLengthTransition"],"mappings":";;;;AAcO,MAAMA,IAAoBC,EAAK,SAAuB;AAAA,EAC3DC,kBAAAA;AAAAA,EACAC,OAAAA;AAAAA,EACAC,uBAAAA;AAAAA,EACAC,yBAAAA;AAAAA,EACAC,aAAAA;AACsB,GAAG;AAEzB,SACE,gBAAAC,EAACC,EAAO,MAAP,EACC,aAAAF,GACA,SAAS,IACT,SAASJ,IAAmBG,IAA0BD,GACtD,QAAQD,GACR,YAAYM,GAA0B;AAG5C,CAAC;"}

package/dist/visualization.es116.js

@@ -1,21 +1,29 @@
-import { jsx as e } from "react/jsx-runtime";
-import { useBranchLengthTransition as m } from "./visualization.es7.js";
-import { memo as a } from "react";
-import { motion as s } from "./visualization.es50.js";
-const c = a(function({
-  scaledLinkPath: o,
-  baseLinkPath: n,
-  color: r,
-  strokeWidth: i,
-  useBranchLengths: t
-}) {
-  return /* @__PURE__ */ e(s.path, { stroke: r, strokeWidth: i, fill: "none", initial: !1, strokeLinecap: "round", strokeLinejoin: "round", animate: {
-    d: t ? o : n
-  }, transition: {
-    d: m
-  } });
+import { jsx as u, jsxs as k } from "react/jsx-runtime";
+import { c as g } from "react/compiler-runtime";
+import { memo as j } from "react";
+import O from "./visualization.es26.js";
+const F = j(function(L) {
+  const t = g(16), {
+    nodeX: N,
+    color: e,
+    baseNodeX: f,
+    baseNodeY: i,
+    label: a,
+    fontSize: n,
+    fontFamily: c,
+    strokeWidth: m
+  } = L, s = N * 180 / Math.PI - 90, d = s > 90 || s < -90, $ = d ? s + 180 : s, p = d ? "end" : "start", x = d ? -6 : 6, b = `rotate(${$}) translate(0, ${(n ?? 2.4) / 3})`, h = a === "Human" ? `${a} ★★★` : a;
+  let o;
+  t[0] !== e || t[1] !== c || t[2] !== n || t[3] !== m || t[4] !== b || t[5] !== h || t[6] !== p || t[7] !== x ? (o = /* @__PURE__ */ u("text", { fontSize: n, fontFamily: c, fill: e, stroke: e, strokeWidth: m, paintOrder: "stroke", transform: b, textAnchor: p, x, children: h }), t[0] = e, t[1] = c, t[2] = n, t[3] = m, t[4] = b, t[5] = h, t[6] = p, t[7] = x, t[8] = o) : o = t[8];
+  let r;
+  t[9] !== e ? (r = /* @__PURE__ */ u("circle", { r: 1.5, fill: e }), t[9] = e, t[10] = r) : r = t[10];
+  let l;
+  return t[11] !== f || t[12] !== i || t[13] !== o || t[14] !== r ? (l = /* @__PURE__ */ k(O, { top: i, left: f, children: [
+    o,
+    r
+  ] }), t[11] = f, t[12] = i, t[13] = o, t[14] = r, t[15] = l) : l = t[15], l;
 });
 export {
-  c as TreeLink
+  F as LeafNodeLabel
 };
 //# sourceMappingURL=visualization.es116.js.map

package/dist/visualization.es116.js.map

@@ -1 +1 @@
-{"version":3,"file":"visualization.es116.js","sources":["../src/components/PhyloTree/TreeLink.tsx"],"sourcesContent":["import { TreeNode } from \"./types\";\nimport { motion } from \"framer-motion\";\nimport { useBranchLengthTransition } from \"./PhyloTree\";\nimport { memo } from \"react\";\n\nexport type TreeLinkProps = {\n  scaledLinkPath: TreeNode[\"scaledLinkPath\"]\n  baseLinkPath: TreeNode[\"baseLinkPath\"]\n  color: TreeNode[\"color\"]\n  strokeWidth: TreeNode[\"linkStrokeWidth\"]\n  useBranchLengths: boolean;\n};\n\n/**\n * Link from node to its parent\n */\nexport const TreeLink = memo(function TreeLink({\n  scaledLinkPath,\n  baseLinkPath,\n  color,\n  strokeWidth,\n  useBranchLengths,\n}: TreeLinkProps) {\n  return (\n    <motion.path\n      stroke={color}\n      strokeWidth={strokeWidth}\n      fill=\"none\"\n      initial={false}\n      strokeLinecap={\"round\"}\n      strokeLinejoin={\"round\"}\n      animate={{\n        d: useBranchLengths ? scaledLinkPath : baseLinkPath,\n      }}\n      transition={{\n        d: useBranchLengthTransition,\n      }}\n    />\n  );\n})\n"],"names":["TreeLink","memo","scaledLinkPath","baseLinkPath","color","strokeWidth","useBranchLengths","jsx","motion","d","useBranchLengthTransition"],"mappings":";;;;AAgBO,MAAMA,IAAWC,EAAK,SAAkB;AAAA,EAC7CC,gBAAAA;AAAAA,EACAC,cAAAA;AAAAA,EACAC,OAAAA;AAAAA,EACAC,aAAAA;AAAAA,EACAC,kBAAAA;AACa,GAAG;AAChB,SACE,gBAAAC,EAACC,EAAO,MAAP,EACC,QAAQJ,GACR,aAAAC,GACA,MAAK,QACL,SAAS,IACT,eAAe,SACf,gBAAgB,SAChB,SAAS;AAAA,IACPI,GAAGH,IAAmBJ,IAAiBC;AAAAA,EAAAA,GAEzC,YAAY;AAAA,IACVM,GAAGC;AAAAA,EAAAA,GACH;AAGR,CAAC;"}
+{"version":3,"file":"visualization.es116.js","sources":["../src/components/PhyloTree/LeafNodeLabel.tsx"],"sourcesContent":["import { PhyloTreeProps, TreeNode } from \"./types\";\nimport { Group } from \"@visx/group\";\nimport { memo } from \"react\";\n\n\nexport type LeafNodeLabelProps = {\n  // node.x is the angle the node is at in radial layout while base/scaled are true x/y position in svg\n  nodeX: number;\n  baseNodeX: TreeNode[\"baseNodeX\"];\n  baseNodeY: TreeNode[\"baseNodeY\"];\n  label: TreeNode[\"label\"];\n  color: TreeNode[\"color\"];\n  fontSize: PhyloTreeProps[\"leafFontSize\"];\n  fontFamily: PhyloTreeProps[\"leafFontFamily\"];\n  strokeWidth: TreeNode[\"labelStrokeWidth\"]\n};\n\nexport const LeafNodeLabel = memo(function LeafNodeLabel({\n  nodeX,\n  color,\n  baseNodeX,\n  baseNodeY,\n  label,\n  fontSize,\n  fontFamily,\n  strokeWidth\n}: LeafNodeLabelProps) {\n  const angleDeg = (nodeX * 180) / Math.PI - 90;\n  const flip = angleDeg > 90 || angleDeg < -90;\n  const rotation = flip ? angleDeg + 180 : angleDeg;\n  const textAnchor: \"start\" | \"end\" = flip ? \"end\" : \"start\";\n  const xOffset = flip ? -6 : 6;\n\n  return (\n    <Group\n      top={baseNodeY}\n      left={baseNodeX}\n    >\n      <text\n        fontSize={fontSize}\n        fontFamily={fontFamily}\n        fill={color}\n        stroke={color}\n        strokeWidth={strokeWidth}\n        paintOrder=\"stroke\"\n        transform={`rotate(${rotation}) translate(0, ${(fontSize ?? 2.4) / 3})`}\n        textAnchor={textAnchor}\n        x={xOffset}\n      >\n        {label === \"Human\" ? `${label} \\u2605\\u2605\\u2605` : label}\n      </text>\n      <circle\n        r={1.5}\n        fill={color}\n      />\n    </Group>\n  );\n});\n"],"names":["LeafNodeLabel","memo","t0","$","_c","nodeX","color","baseNodeX","baseNodeY","label","fontSize","fontFamily","strokeWidth","angleDeg","Math","PI","flip","rotation","textAnchor","xOffset","t1","t2","t3","t4","jsx","t5","jsxs","Group"],"mappings":";;;;AAiBO,MAAMA,IAAgBC,EAAK,SAAAC,GAAA;AAAA,QAAAC,IAAAC,EAAA,EAAA,GAAuB;AAAA,IAAAC,OAAAA;AAAAA,IAAAC,OAAAA;AAAAA,IAAAC,WAAAA;AAAAA,IAAAC,WAAAA;AAAAA,IAAAC,OAAAA;AAAAA,IAAAC,UAAAA;AAAAA,IAAAC,YAAAA;AAAAA,IAAAC,aAAAA;AAAAA,EAAAA,IAAAV,GAUvDW,IAAkBR,IAAQ,MAAOS,KAAIC,KAAM,IAC3CC,IAAaH,IAAW,MAAMA,IAAW,KACzCI,IAAiBD,IAAOH,IAAW,MAAlBA,GACjBK,IAAoCF,IAAA,QAAA,SACpCG,IAAgBH,IAAA,KAAA,GAcCI,IAAA,UAAUH,CAAQ,mBAAmBP,KAAA,OAAmB,CAAC,KAInEW,IAAAZ,MAAU,UAAV,GAAuBA,CAAK,SAA5BA;AAAyD,MAAAa;AAAA,EAAAnB,EAAA,CAAA,MAAAG,KAAAH,EAAA,CAAA,MAAAQ,KAAAR,EAAA,CAAA,MAAAO,KAAAP,EAAA,CAAA,MAAAS,KAAAT,EAAA,CAAA,MAAAiB,KAAAjB,EAAA,CAAA,MAAAkB,KAAAlB,EAAA,CAAA,MAAAe,KAAAf,SAAAgB,KAX5DG,sBAAA,QAAA,EACYZ,UAAAA,GACEC,YAAAA,GACNL,MAAAA,GACEA,QAAAA,GACKM,aAAAA,GACF,YAAA,UACA,WAAAQ,GACCF,YAAAA,GACTC,GAEFE,UAAAA,GACH,GAAOlB,OAAAG,GAAAH,OAAAQ,GAAAR,OAAAO,GAAAP,OAAAS,GAAAT,OAAAiB,GAAAjB,OAAAkB,GAAAlB,OAAAe,GAAAf,OAAAgB,GAAAhB,OAAAmB,KAAAA,IAAAnB,EAAA,CAAA;AAAA,MAAAoB;AAAA,EAAApB,SAAAG,KACPiB,IAAA,gBAAAC,EAAA,UAAA,EACK,GAAA,KACGlB,MAAAA,GAAK,GACXH,OAAAG,GAAAH,QAAAoB,KAAAA,IAAApB,EAAA,EAAA;AAAA,MAAAsB;AAAA,SAAAtB,EAAA,EAAA,MAAAI,KAAAJ,EAAA,EAAA,MAAAK,KAAAL,EAAA,EAAA,MAAAmB,KAAAnB,UAAAoB,KApBJE,IAAA,gBAAAC,EAACC,GAAA,EACMnB,KAAAA,GACCD,SAENe,UAAAA;AAAAA,IAAAA;AAAAA,IAaAC;AAAAA,EAAAA,GAIF,GAAQpB,QAAAI,GAAAJ,QAAAK,GAAAL,QAAAmB,GAAAnB,QAAAoB,GAAApB,QAAAsB,KAAAA,IAAAtB,EAAA,EAAA,GArBRsB;AAqBQ,CAEX;"}

package/dist/visualization.es117.js

@@ -1,17 +1,35 @@
-import { jsx as e } from "react/jsx-runtime";
-import { useBranchLengthTransition as m } from "./visualization.es7.js";
-import { memo as s } from "react";
-import { motion as a } from "./visualization.es50.js";
-const k = s(function({
-  useBranchLengths: n,
-  color: i,
-  baseLeafLinkExtension: o,
-  scaledLeafLinkExtension: t,
-  strokeWidth: r
-}) {
-  return /* @__PURE__ */ e(a.line, { strokeWidth: r, initial: !1, animate: n ? t : o, stroke: i, transition: m });
-});
+import { jsx as u } from "react/jsx-runtime";
+import { c as S } from "react/compiler-runtime";
+import { getAnimationProps as T } from "./visualization.es22.js";
+import { getTrianglePoints as A } from "./visualization.es17.js";
+import { motion as W } from "./visualization.es27.js";
+const G = (k) => {
+  const o = S(19), {
+    pointData: g,
+    animation: e,
+    animationGroupSize: a,
+    animationBuffer: i,
+    xScaleTransformed: n,
+    yScaleTransformed: s,
+    boundedWidth: c,
+    boundedHeight: l
+  } = k;
+  let t;
+  if (o[0] !== e || o[1] !== i || o[2] !== a || o[3] !== l || o[4] !== c || o[5] !== g || o[6] !== n || o[7] !== s) {
+    let f;
+    o[9] !== e || o[10] !== i || o[11] !== a || o[12] !== l || o[13] !== c || o[14] !== n || o[15] !== s ? (f = (r, y) => {
+      const x = W.g, b = Math.floor(y / (a ?? 1)), P = T(e, b, i ?? 0.03), p = n(r.x), d = s(r.y);
+      if (p < 0 || p > c || d < 0 || d > l)
+        return null;
+      const h = r.r ?? 3;
+      return /* @__PURE__ */ u(x, { ...P, children: r.shape === "triangle" ? /* @__PURE__ */ u("polygon", { points: A(p, d, h), fill: r.color ?? "black", stroke: r.stroke, opacity: r.opacity ?? 1 }) : /* @__PURE__ */ u("circle", { cx: p, cy: d, r: h, fill: r.color ?? "black", stroke: r.stroke, opacity: r.opacity ?? 1 }) }, `pt-${y}`);
+    }, o[9] = e, o[10] = i, o[11] = a, o[12] = l, o[13] = c, o[14] = n, o[15] = s, o[16] = f) : f = o[16], t = g.map(f), o[0] = e, o[1] = i, o[2] = a, o[3] = l, o[4] = c, o[5] = g, o[6] = n, o[7] = s, o[8] = t;
+  } else
+    t = o[8];
+  let m;
+  return o[17] !== t ? (m = /* @__PURE__ */ u("g", { children: t }), o[17] = t, o[18] = m) : m = o[18], m;
+};
 export {
-  k as LeafLinkExtension
+  G as default
 };
 //# sourceMappingURL=visualization.es117.js.map

package/dist/visualization.es117.js.map

@@ -1 +1 @@
-{"version":3,"file":"visualization.es117.js","sources":["../src/components/PhyloTree/LeafLinkExtension.tsx"],"sourcesContent":["import { motion } from \"framer-motion\";\nimport { useBranchLengthTransition } from \"./PhyloTree\";\nimport { memo } from \"react\";\nimport { TreeNode } from \"./types\";\n\n\nexport type LeafLinkExtensionProps = {\n  baseLeafLinkExtension: TreeNode[\"baseLeafLinkExtension\"]\n  scaledLeafLinkExtension: TreeNode[\"scaledLeafLinkExtension\"]\n  color: TreeNode[\"color\"];\n  strokeWidth: TreeNode[\"linkStrokeWidth\"]\n  useBranchLengths: boolean\n};\n\nexport const LeafLinkExtension = memo(function LinkExtension({\n  useBranchLengths,\n  color,\n  baseLeafLinkExtension,\n  scaledLeafLinkExtension,\n  strokeWidth\n}: LeafLinkExtensionProps) {\n\n  return (\n    <motion.line\n      strokeWidth={strokeWidth}\n      initial={false}\n      animate={useBranchLengths ? scaledLeafLinkExtension : baseLeafLinkExtension}\n      stroke={color}\n      transition={useBranchLengthTransition}\n    />\n  );\n});\n"],"names":["LeafLinkExtension","memo","useBranchLengths","color","baseLeafLinkExtension","scaledLeafLinkExtension","strokeWidth","jsx","motion","useBranchLengthTransition"],"mappings":";;;;AAcO,MAAMA,IAAoBC,EAAK,SAAuB;AAAA,EAC3DC,kBAAAA;AAAAA,EACAC,OAAAA;AAAAA,EACAC,uBAAAA;AAAAA,EACAC,yBAAAA;AAAAA,EACAC,aAAAA;AACsB,GAAG;AAEzB,SACE,gBAAAC,EAACC,EAAO,MAAP,EACC,aAAAF,GACA,SAAS,IACT,SAASJ,IAAmBG,IAA0BD,GACtD,QAAQD,GACR,YAAYM,GAA0B;AAG5C,CAAC;"}
+{"version":3,"file":"visualization.es117.js","sources":["../src/components/ScatterPlot/AnimatedPoints.tsx"],"sourcesContent":["import React from \"react\";\nimport { motion } from \"framer-motion\";\nimport { ScaleLinear } from \"@visx/vendor/d3-scale\";\nimport { AnimationType, getAnimationProps } from \"../../utility\";\nimport { Point } from \"./types\";\nimport { getTrianglePoints } from \"./helpers\";\n\ntype AnimatedPointsProps<T extends object> = {\n    pointData: Point<T>[];\n    animation: AnimationType;\n    animationGroupSize?: number;\n    animationBuffer?: number;\n    xScaleTransformed: ScaleLinear<number, number, never>;\n    yScaleTransformed: ScaleLinear<number, number, never>;\n    boundedWidth: number;\n    boundedHeight: number;\n};\n\nconst AnimatedPoints = <T extends object>({\n    pointData,\n    animation,\n    animationGroupSize,\n    animationBuffer,\n    xScaleTransformed,\n    yScaleTransformed,\n    boundedWidth,\n    boundedHeight,\n}: AnimatedPointsProps<T>) => (\n    <g>\n        {pointData.map((point, index) => {\n            const Wrapper = motion.g;\n            const groupIndex = Math.floor(index / (animationGroupSize ?? 1));\n            const animationProps = getAnimationProps(animation, groupIndex, animationBuffer ?? 0.03);\n            const cx = xScaleTransformed(point.x);\n            const cy = yScaleTransformed(point.y);\n            if (cx < 0 || cx > boundedWidth || cy < 0 || cy > boundedHeight) return null;\n            const radius = point.r ?? 3;\n            return (\n                <Wrapper key={`pt-${index}`} {...animationProps}>\n                    {point.shape === \"triangle\" ? (\n                        <polygon\n                            points={getTrianglePoints(cx, cy, radius)}\n                            fill={point.color ?? \"black\"}\n                            stroke={point.stroke}\n                            opacity={point.opacity ?? 1}\n                        />\n                    ) : (\n                        <circle\n                            cx={cx}\n                            cy={cy}\n                            r={radius}\n                            fill={point.color ?? \"black\"}\n                            stroke={point.stroke}\n                            opacity={point.opacity ?? 1}\n                        />\n                    )}\n                </Wrapper>\n            );\n        })}\n    </g>\n);\n\nexport default AnimatedPoints;\n"],"names":["AnimatedPoints","t0","$","_c","pointData","animation","animationGroupSize","animationBuffer","xScaleTransformed","yScaleTransformed","boundedWidth","boundedHeight","t1","t2","point","index","Wrapper","motion","g","groupIndex","Math","floor","animationProps","getAnimationProps","cx","x","cy","y","radius","r","jsx","shape","getTrianglePoints","color","stroke","opacity","map"],"mappings":";;;;;AAkBA,MAAMA,IAAiBC,CAAAA,MAAA;AAAA,QAAAC,IAAAC,EAAA,EAAA,GAAmB;AAAA,IAAAC,WAAAA;AAAAA,IAAAC,WAAAA;AAAAA,IAAAC,oBAAAA;AAAAA,IAAAC,iBAAAA;AAAAA,IAAAC,mBAAAA;AAAAA,IAAAC,mBAAAA;AAAAA,IAAAC,cAAAA;AAAAA,IAAAC,eAAAA;AAAAA,EAAAA,IAAAV;AASjB,MAAAW;AAAA,MAAAV,EAAA,CAAA,MAAAG,KAAAH,EAAA,CAAA,MAAAK,KAAAL,EAAA,CAAA,MAAAI,KAAAJ,EAAA,CAAA,MAAAS,KAAAT,EAAA,CAAA,MAAAQ,KAAAR,EAAA,CAAA,MAAAE,KAAAF,EAAA,CAAA,MAAAM,KAAAN,SAAAO,GAAA;AAAA,QAAAI;AAAA,IAAAX,EAAA,CAAA,MAAAG,KAAAH,EAAA,EAAA,MAAAK,KAAAL,EAAA,EAAA,MAAAI,KAAAJ,UAAAS,KAAAT,EAAA,EAAA,MAAAQ,KAAAR,EAAA,EAAA,MAAAM,KAAAN,EAAA,EAAA,MAAAO,KAEFI,IAAAA,CAAAC,GAAAC,MAAA;AACX,YAAAC,IAAgBC,EAAMC,GACtBC,IAAmBC,KAAIC,MAAON,KAAST,KAAA,EAAwB,GAC/DgB,IAAuBC,EAAkBlB,GAAWc,GAAYZ,KAAA,IAAuB,GACvFiB,IAAWhB,EAAkBM,EAAKW,CAAE,GACpCC,IAAWjB,EAAkBK,EAAKa,CAAE;AACpC,UAAIH,IAAK,KAAKA,IAAKd,KAAgBgB,IAAK,KAAKA,IAAKf;AAAa,eAAS;AACxE,YAAAiB,IAAed,EAAKe,KAAL;AAAa,aAExB,gBAAAC,EAACd,KAA0B,GAAMM,GAC5BR,YAAKiB,UAAW,4CAED,QAAAC,EAAkBR,GAAIE,GAAIE,CAAM,GAClC,MAAAd,EAAKmB,SAAL,SACE,QAAAnB,EAAKoB,QACJ,SAAApB,EAAKqB,WAAL,EAAA,CAAkB,IAG/B,gBAAAL,cACQN,IAAAA,GACAE,IAAAA,GACDE,MACG,MAAAd,EAAKmB,SAAL,SACE,QAAAnB,EAAKoB,QACJ,SAAApB,EAAKqB,WAAL,EAAA,CAAkB,EAAA,SAfnBpB,CAAK,EAkBzB;AAAA,IAAU,GAEjBb,OAAAG,GAAAH,QAAAK,GAAAL,QAAAI,GAAAJ,QAAAS,GAAAT,QAAAQ,GAAAR,QAAAM,GAAAN,QAAAO,GAAAP,QAAAW,KAAAA,IAAAX,EAAA,EAAA,GA7BAU,IAAAR,EAASgC,IAAKvB,CA6Bd,GAACX,OAAAG,GAAAH,OAAAK,GAAAL,OAAAI,GAAAJ,OAAAS,GAAAT,OAAAQ,GAAAR,OAAAE,GAAAF,OAAAM,GAAAN,OAAAO,GAAAP,OAAAU;AAAAA,EAAA;AAAAA,IAAAA,IAAAV,EAAA,CAAA;AAAA,MAAAW;AAAA,SAAAX,UAAAU,KA9BNC,6BACKD,UAAAA,EAAAA,CA8BL,GAAIV,QAAAU,GAAAV,QAAAW,KAAAA,IAAAX,EAAA,EAAA,GA/BJW;AA+BI;"}

package/dist/visualization.es118.js

@@ -1,29 +1,48 @@
-import { jsx as u, jsxs as k } from "react/jsx-runtime";
-import { c as g } from "react/compiler-runtime";
-import { memo as j } from "react";
-import O from "./visualization.es55.js";
-const F = j(function(L) {
-  const t = g(16), {
-    nodeX: N,
-    color: e,
-    baseNodeX: f,
-    baseNodeY: i,
-    label: a,
-    fontSize: n,
-    fontFamily: c,
-    strokeWidth: m
-  } = L, s = N * 180 / Math.PI - 90, d = s > 90 || s < -90, $ = d ? s + 180 : s, p = d ? "end" : "start", x = d ? -6 : 6, b = `rotate(${$}) translate(0, ${(n ?? 2.4) / 3})`, h = a === "Human" ? `${a} ★★★` : a;
-  let o;
-  t[0] !== e || t[1] !== c || t[2] !== n || t[3] !== m || t[4] !== b || t[5] !== h || t[6] !== p || t[7] !== x ? (o = /* @__PURE__ */ u("text", { fontSize: n, fontFamily: c, fill: e, stroke: e, strokeWidth: m, paintOrder: "stroke", transform: b, textAnchor: p, x, children: h }), t[0] = e, t[1] = c, t[2] = n, t[3] = m, t[4] = b, t[5] = h, t[6] = p, t[7] = x, t[8] = o) : o = t[8];
-  let r;
-  t[9] !== e ? (r = /* @__PURE__ */ u("circle", { r: 1.5, fill: e }), t[9] = e, t[10] = r) : r = t[10];
-  let l;
-  return t[11] !== f || t[12] !== i || t[13] !== o || t[14] !== r ? (l = /* @__PURE__ */ k(O, { top: i, left: f, children: [
-    o,
-    r
-  ] }), t[11] = f, t[12] = i, t[13] = o, t[14] = r, t[15] = l) : l = t[15], l;
-});
+import { jsxs as E, jsx as b } from "react/jsx-runtime";
+import { c as $ } from "react/compiler-runtime";
+import v from "./visualization.es26.js";
+const H = (u) => {
+  const t = $(15), {
+    pointData: x,
+    xScaleTransformed: a,
+    yScaleTransformed: f,
+    boundedWidth: n,
+    boundedHeight: l,
+    margin: o
+  } = u;
+  if (!x.some(z))
+    return null;
+  const T = o.top, j = o.left;
+  let s;
+  if (t[0] !== l || t[1] !== n || t[2] !== x || t[3] !== a || t[4] !== f) {
+    let m;
+    t[6] !== l || t[7] !== n || t[8] !== a || t[9] !== f ? (m = (r, k) => {
+      if (!r.label)
+        return null;
+      const c = a(r.x), i = f(r.y);
+      if (c < 0 || c > n || i < 0 || i > l)
+        return null;
+      const p = r.label.length * 7, y = r.r ?? 3, g = Math.atan2(i - l / 2, c - n / 2);
+      let e = Math.cos(g), d = Math.sin(g);
+      const W = c + e * 15, A = e >= 0 ? W + 4 + p : W - 4 - p;
+      (A > n || A < 0) && (e = -e);
+      const M = i + d * 15;
+      (M < 0 || M > l) && (d = -d);
+      const R = c + e * 15, S = i + d * 15, w = e >= 0 ? "start" : "end";
+      return /* @__PURE__ */ E("g", { pointerEvents: "none", children: [
+        /* @__PURE__ */ b("line", { x1: c + e * y, y1: i + d * y, x2: R, y2: S, stroke: "#555", strokeWidth: 1 }),
+        /* @__PURE__ */ b("text", { x: R + (e >= 0 ? 4 : -4), y: S, textAnchor: w, dominantBaseline: "middle", fontSize: 11, fontWeight: "bold", fill: "#1c1917", children: r.label })
+      ] }, `lbl-${k}`);
+    }, t[6] = l, t[7] = n, t[8] = a, t[9] = f, t[10] = m) : m = t[10], s = x.map(m), t[0] = l, t[1] = n, t[2] = x, t[3] = a, t[4] = f, t[5] = s;
+  } else
+    s = t[5];
+  let h;
+  return t[11] !== o.left || t[12] !== o.top || t[13] !== s ? (h = /* @__PURE__ */ b(v, { top: T, left: j, children: s }), t[11] = o.left, t[12] = o.top, t[13] = s, t[14] = h) : h = t[14], h;
+};
+function z(u) {
+  return u.label;
+}
 export {
-  F as LeafNodeLabel
+  H as default
 };
 //# sourceMappingURL=visualization.es118.js.map

package/dist/visualization.es118.js.map

@@ -1 +1 @@
-{"version":3,"file":"visualization.es118.js","sources":["../src/components/PhyloTree/LeafNodeLabel.tsx"],"sourcesContent":["import { PhyloTreeProps, TreeNode } from \"./types\";\nimport { Group } from \"@visx/group\";\nimport { memo } from \"react\";\n\n\nexport type LeafNodeLabelProps = {\n  // node.x is the angle the node is at in radial layout while base/scaled are true x/y position in svg\n  nodeX: number;\n  baseNodeX: TreeNode[\"baseNodeX\"];\n  baseNodeY: TreeNode[\"baseNodeY\"];\n  label: TreeNode[\"label\"];\n  color: TreeNode[\"color\"];\n  fontSize: PhyloTreeProps[\"leafFontSize\"];\n  fontFamily: PhyloTreeProps[\"leafFontFamily\"];\n  strokeWidth: TreeNode[\"labelStrokeWidth\"]\n};\n\nexport const LeafNodeLabel = memo(function LeafNodeLabel({\n  nodeX,\n  color,\n  baseNodeX,\n  baseNodeY,\n  label,\n  fontSize,\n  fontFamily,\n  strokeWidth\n}: LeafNodeLabelProps) {\n  const angleDeg = (nodeX * 180) / Math.PI - 90;\n  const flip = angleDeg > 90 || angleDeg < -90;\n  const rotation = flip ? angleDeg + 180 : angleDeg;\n  const textAnchor: \"start\" | \"end\" = flip ? \"end\" : \"start\";\n  const xOffset = flip ? -6 : 6;\n\n  return (\n    <Group\n      top={baseNodeY}\n      left={baseNodeX}\n    >\n      <text\n        fontSize={fontSize}\n        fontFamily={fontFamily}\n        fill={color}\n        stroke={color}\n        strokeWidth={strokeWidth}\n        paintOrder=\"stroke\"\n        transform={`rotate(${rotation}) translate(0, ${(fontSize ?? 2.4) / 3})`}\n        textAnchor={textAnchor}\n        x={xOffset}\n      >\n        {label === \"Human\" ? `${label} \\u2605\\u2605\\u2605` : label}\n      </text>\n      <circle\n        r={1.5}\n        fill={color}\n      />\n    </Group>\n  );\n});\n"],"names":["LeafNodeLabel","memo","t0","$","_c","nodeX","color","baseNodeX","baseNodeY","label","fontSize","fontFamily","strokeWidth","angleDeg","Math","PI","flip","rotation","textAnchor","xOffset","t1","t2","t3","t4","jsx","t5","jsxs","Group"],"mappings":";;;;AAiBO,MAAMA,IAAgBC,EAAK,SAAAC,GAAA;AAAA,QAAAC,IAAAC,EAAA,EAAA,GAAuB;AAAA,IAAAC,OAAAA;AAAAA,IAAAC,OAAAA;AAAAA,IAAAC,WAAAA;AAAAA,IAAAC,WAAAA;AAAAA,IAAAC,OAAAA;AAAAA,IAAAC,UAAAA;AAAAA,IAAAC,YAAAA;AAAAA,IAAAC,aAAAA;AAAAA,EAAAA,IAAAV,GAUvDW,IAAkBR,IAAQ,MAAOS,KAAIC,KAAM,IAC3CC,IAAaH,IAAW,MAAMA,IAAW,KACzCI,IAAiBD,IAAOH,IAAW,MAAlBA,GACjBK,IAAoCF,IAAA,QAAA,SACpCG,IAAgBH,IAAA,KAAA,GAcCI,IAAA,UAAUH,CAAQ,mBAAmBP,KAAA,OAAmB,CAAC,KAInEW,IAAAZ,MAAU,UAAV,GAAuBA,CAAK,SAA5BA;AAAyD,MAAAa;AAAA,EAAAnB,EAAA,CAAA,MAAAG,KAAAH,EAAA,CAAA,MAAAQ,KAAAR,EAAA,CAAA,MAAAO,KAAAP,EAAA,CAAA,MAAAS,KAAAT,EAAA,CAAA,MAAAiB,KAAAjB,EAAA,CAAA,MAAAkB,KAAAlB,EAAA,CAAA,MAAAe,KAAAf,SAAAgB,KAX5DG,sBAAA,QAAA,EACYZ,UAAAA,GACEC,YAAAA,GACNL,MAAAA,GACEA,QAAAA,GACKM,aAAAA,GACF,YAAA,UACA,WAAAQ,GACCF,YAAAA,GACTC,GAEFE,UAAAA,GACH,GAAOlB,OAAAG,GAAAH,OAAAQ,GAAAR,OAAAO,GAAAP,OAAAS,GAAAT,OAAAiB,GAAAjB,OAAAkB,GAAAlB,OAAAe,GAAAf,OAAAgB,GAAAhB,OAAAmB,KAAAA,IAAAnB,EAAA,CAAA;AAAA,MAAAoB;AAAA,EAAApB,SAAAG,KACPiB,IAAA,gBAAAC,EAAA,UAAA,EACK,GAAA,KACGlB,MAAAA,GAAK,GACXH,OAAAG,GAAAH,QAAAoB,KAAAA,IAAApB,EAAA,EAAA;AAAA,MAAAsB;AAAA,SAAAtB,EAAA,EAAA,MAAAI,KAAAJ,EAAA,EAAA,MAAAK,KAAAL,EAAA,EAAA,MAAAmB,KAAAnB,UAAAoB,KApBJE,IAAA,gBAAAC,EAACC,GAAA,EACMnB,KAAAA,GACCD,SAENe,UAAAA;AAAAA,IAAAA;AAAAA,IAaAC;AAAAA,EAAAA,GAIF,GAAQpB,QAAAI,GAAAJ,QAAAK,GAAAL,QAAAmB,GAAAnB,QAAAoB,GAAApB,QAAAsB,KAAAA,IAAAtB,EAAA,EAAA,GArBRsB;AAqBQ,CAEX;"}
+{"version":3,"file":"visualization.es118.js","sources":["../src/components/ScatterPlot/PointLabels.tsx"],"sourcesContent":["import React from \"react\";\nimport { Group } from \"@visx/group\";\nimport { ScaleLinear } from \"@visx/vendor/d3-scale\";\nimport { Point } from \"./types\";\n\ntype PointLabelsProps<T extends object> = {\n    pointData: Point<T>[];\n    xScaleTransformed: ScaleLinear<number, number, never>;\n    yScaleTransformed: ScaleLinear<number, number, never>;\n    boundedWidth: number;\n    boundedHeight: number;\n    margin: { top: number; left: number };\n};\n\nconst PointLabels = <T extends object>({\n    pointData,\n    xScaleTransformed,\n    yScaleTransformed,\n    boundedWidth,\n    boundedHeight,\n    margin,\n}: PointLabelsProps<T>) => {\n    if (!pointData.some(p => p.label)) return null;\n\n    return (\n        <Group top={margin.top} left={margin.left}>\n            {pointData.map((point, i) => {\n                if (!point.label) return null;\n                const cx = xScaleTransformed(point.x);\n                const cy = yScaleTransformed(point.y);\n                if (cx < 0 || cx > boundedWidth || cy < 0 || cy > boundedHeight) return null;\n\n                const lineLen = 15;\n                const estTextWidth = point.label.length * 7;\n                const circleR = (point.r ?? 3);\n                const angle = Math.atan2(cy - boundedHeight / 2, cx - boundedWidth / 2);\n                let cosA = Math.cos(angle);\n                let sinA = Math.sin(angle);\n\n                // Flip horizontal if text would overflow left/right\n                const lxRaw = cx + cosA * lineLen;\n                const textEndX = cosA >= 0 ? lxRaw + 4 + estTextWidth : lxRaw - 4 - estTextWidth;\n                if (textEndX > boundedWidth || textEndX < 0) cosA = -cosA;\n\n                // Flip vertical if line endpoint would overflow top/bottom\n                const lyRaw = cy + sinA * lineLen;\n                if (lyRaw < 0 || lyRaw > boundedHeight) sinA = -sinA;\n\n                const lx = cx + cosA * lineLen;\n                const ly = cy + sinA * lineLen;\n                const anchor = cosA >= 0 ? \"start\" : \"end\";\n\n                return (\n                    <g key={`lbl-${i}`} pointerEvents=\"none\">\n                        <line x1={cx + cosA * circleR} y1={cy + sinA * circleR} x2={lx} y2={ly} stroke=\"#555\" strokeWidth={1} />\n                        <text x={lx + (cosA >= 0 ? 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package/dist/visualization.es119.js

@@ -1,16 +1,79 @@
-function u(n, i) {
-  let l = 0, t = 0;
-  if (i === void 0)
-    for (let e of n)
-      e != null && (e = +e) >= e && (++l, t += e);
-  else {
-    let e = -1;
-    for (let f of n)
-      (f = i(f, ++e, n)) != null && (f = +f) >= f && (++l, t += f);
-  }
-  if (l) return t / l;
-}
+import { jsx as l, jsxs as F, Fragment as B } from "react/jsx-runtime";
+import { c as D } from "react/compiler-runtime";
+import { useId as E } from "react";
+import J from "./visualization.es25.js";
+import K from "./visualization.es26.js";
+const U = (M) => {
+  const e = D(49), {
+    backgroundGradient: y,
+    boundedHeight: t,
+    barLeft: W,
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package/dist/visualization.es12.js

@@ -1,8 +1,8 @@
 import { jsx as m } from "react/jsx-runtime";
 import { c as S } from "react/compiler-runtime";
 import { memo as T, useState as P, useImperativeHandle as b } from "react";
-import g from "./visualization.es39.js";
-import x from "./visualization.es89.js";
+import g from "./visualization.es48.js";
+import x from "./visualization.es49.js";
 const c = 10;
 function y(l) {
   const t = S(10), {

package/dist/visualization.es120.js

@@ -1,77 +1,28 @@
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-import { c as H } from "react/compiler-runtime";
-import B from "./visualization.es143.js";
-import I from "./visualization.es55.js";
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-    left: G,
-    top: L,
-    median: l,
-    firstQuartile: n,
-    thirdQuartile: c,
-    valueScale: t,
-    medianWidth: s,
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+import { jsx as l, jsxs as R, Fragment as y } from "react/jsx-runtime";
+import { c as f } from "react/compiler-runtime";
+const c = "#666", d = 1, S = [2, 2], H = (h) => {
+  const t = f(11), {
+    position: x,
+    boundedWidth: e,
+    boundedHeight: o
+  } = h, {
+    x: s,
+    y: n
+  } = x;
+  let r;
+  t[0] !== o || t[1] !== e || t[2] !== n ? (r = n >= 0 && n <= o && /* @__PURE__ */ l("line", { x1: 0, x2: e, y1: n, y2: n, stroke: c, strokeWidth: d, strokeDasharray: S.join(","), pointerEvents: "none" }), t[0] = o, t[1] = e, t[2] = n, t[3] = r) : r = t[3];
+  let i;
+  t[4] !== o || t[5] !== e || t[6] !== s ? (i = s >= 0 && s <= e && /* @__PURE__ */ l("line", { x1: s, x2: s, y1: 0, y2: o, stroke: c, strokeWidth: d, strokeDasharray: S.join(","), pointerEvents: "none" }), t[4] = o, t[5] = e, t[6] = s, t[7] = i) : i = t[7];
+  let a;
+  return t[8] !== r || t[9] !== i ? (a = /* @__PURE__ */ R(y, { children: [
+    r,
+    i
+  ] }), t[8] = r, t[9] = i, t[10] = a) : a = t[10], a;
 };
 export {
-  R as default
+  S as CROSSHAIR_DASH,
+  c as CROSSHAIR_STROKE,
+  d as CROSSHAIR_STROKE_WIDTH,
+  H as default
 };
 //# sourceMappingURL=visualization.es120.js.map

package/dist/visualization.es120.js.map

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