@weng-lab/visualization 2.4.0-beta.0 → 2.4.0-beta.2

package/dist/visualization.es20.js.map

@@ -1 +1 @@
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+{"version":3,"file":"visualization.es20.js","sources":["../src/components/ViolinPlot/helpers.ts"],"sourcesContent":["import { mean } from '@visx/vendor/d3-array';\n\n//measure the height of the longest tick\nexport const getTextHeight = (text: string, fontSize: number, fontFamily: string): number => {\n    const el = document.createElement(\"g\");\n    el.style.position = \"absolute\";\n    el.style.visibility = \"hidden\";\n    el.style.fontSize = `${fontSize}px`;\n    el.style.fontFamily = fontFamily;\n    el.style.whiteSpace = \"nowrap\";\n    el.textContent = text;\n    document.body.appendChild(el);\n    const width = el.getBoundingClientRect().width;\n    document.body.removeChild(el);\n    return width;\n};\n\n// Get the min, max, quartiles, median, and ouotiers for each data set\nexport const calculateBoxStats = (data: number[], outlierType: string) => {\n\n    data.sort((a, b) => a - b);\n\n    const median = (arr: number[]) => {\n        const mid = Math.floor(arr.length / 2);\n        return arr.length % 2 !== 0 ? arr[mid] : (arr[mid - 1] + arr[mid]) / 2;\n    };\n\n    const getQuartiles = (arr: number[]) => {\n        const mid = Math.floor(arr.length / 2);\n        const lower = arr.slice(0, mid);\n        const upper = arr.slice(arr.length % 2 === 0 ? mid : mid + 1);\n        return {\n            firstQuartile: median(lower),\n            thirdQuartile: median(upper),\n        };\n    };\n\n    // Calculate quartiles\n    const { firstQuartile, thirdQuartile } = getQuartiles(data);\n    const med = median(data);\n\n    // Calculate the IQR and whiskers\n    const iqr = thirdQuartile - firstQuartile;\n    const lowerWhisker = firstQuartile - 1.5 * iqr;\n    const upperWhisker = thirdQuartile + 1.5 * iqr;\n\n    // Calculate outliers (values outside of the whiskers)\n    const outliers = outlierType === \"none\"\n        ? []\n        : outlierType === \"top\"\n            ? data.filter(val => val > upperWhisker)\n            : outlierType === \"bottom\"\n                ? data.filter(val => val < lowerWhisker)\n                : data.filter(val => val < lowerWhisker || val > upperWhisker);\n\n    // Min and max\n    const min = data[0];\n    const max = data[data.length - 1];\n\n    return { min, max, firstQuartile, thirdQuartile, median: med, outliers };\n    \n};\n\nexport function kernelDensityEstimator(\n    kernel: (distance: number) => number,\n    X: number[]\n): (data: number[]) => { value: number, count: number }[] {\n    return (data: number[]) => {\n        return X.map((x) => ({\n            value: x,\n            count: mean(data, (v) => kernel(x - v)) || 0,\n        }));\n    };\n}\n\nexport function gaussian(bandwidth: number): (x: number) => number {\n    const normalizationFactor = 1 / (bandwidth * Math.sqrt(2 * Math.PI));\n    return (x) => normalizationFactor * Math.exp(-0.5 * Math.pow(x / bandwidth, 2));\n}\n\nexport function scottRule(data: number[]) {\n    const n = data.length;\n    if (n === 0) {\n      return 0;\n    }\n  \n    const mean = data.reduce((a, b) => a + b, 0) / n;\n    const variance = data.reduce((acc, val) => acc + Math.pow(val - mean, 2), 0) / data.length;\n    const stdDev = Math.sqrt(variance)\n    const binWidth = 3.5 * stdDev / Math.pow(n, 1/3);\n    return binWidth;\n  }\n\n  export function silvermanRule(data: number[]) {\n    const n = data.length;\n    if (n === 0) return 0;\n\n    const mean = data.reduce((a, b) => a + b, 0) / n;\n    const variance = data.reduce((acc, val) => acc + Math.pow(val - mean, 2), 0) / n;\n    const stdDev = Math.sqrt(variance);\n\n    //calc iqr\n    const sortedData = data.slice().sort((a, b) => a - b);\n    const q1 = sortedData[Math.floor((n - 1) * 0.25)];\n    const q3 = sortedData[Math.floor((n - 1) * 0.75)];\n    const iqr = q3 - q1;\n\n    const bandwidth = 0.9 * Math.min(stdDev, iqr / 1.34) * Math.pow(n, -1 / 5);\n    \n    //ensure a positive result even if quartiles coincide\n    return Math.max(bandwidth, 1e-10);\n}\n\n//randomly generate jitter based on seed to keep jitter consisten across page loads\nexport function seededRandom(seed: string): number {\n    let hash = 0;\n    for (let i = 0; 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package/dist/visualization.es200.js

@@ -1,10 +1,23 @@
-const s = (t, n) => Math.abs(t - n);
-function e(t, n) {
-  const a = s(t.x, n.x), c = s(t.y, n.y);
-  return Math.sqrt(a ** 2 + c ** 2);
+import { isSVGElement as s, isSVGGraphicsElement as m, isSVGSVGElement as f } from "./visualization.es201.js";
+import p from "./visualization.es504.js";
+import c from "./visualization.es244.js";
+function G(t, i) {
+  if (!t || !i) return null;
+  const n = p(i), r = s(t) ? t.ownerSVGElement : t, o = m(r) ? r.getScreenCTM() : null;
+  if (f(r) && o) {
+    let e = r.createSVGPoint();
+    return e.x = n.x, e.y = n.y, e = e.matrixTransform(o.inverse()), new c({
+      x: e.x,
+      y: e.y
+    });
+  }
+  const l = t.getBoundingClientRect();
+  return new c({
+    x: n.x - l.left - t.clientLeft,
+    y: n.y - l.top - t.clientTop
+  });
 }
 export {
-  s as distance,
-  e as distance2D
+  G as default
 };
 //# sourceMappingURL=visualization.es200.js.map

package/dist/visualization.es200.js.map

@@ -1 +1 @@
-{"version":3,"file":"visualization.es200.js","sources":["../../../node_modules/.pnpm/framer-motion@12.38.0_@emotion+is-prop-valid@1.4.0_react-dom@19.2.4_react@19.2.4__react@19.2.4/node_modules/framer-motion/dist/es/utils/distance.mjs"],"sourcesContent":["const distance = (a, b) => Math.abs(a - b);\nfunction distance2D(a, b) {\n    // Multi-dimensional\n    const xDelta = distance(a.x, b.x);\n    const yDelta = distance(a.y, b.y);\n    return Math.sqrt(xDelta ** 2 + yDelta ** 2);\n}\n\nexport { distance, distance2D };\n//# sourceMappingURL=distance.mjs.map\n"],"names":["distance","a","b","distance2D","xDelta","yDelta"],"mappings":"AAAK,MAACA,IAAW,CAACC,GAAGC,MAAM,KAAK,IAAID,IAAIC,CAAC;AACzC,SAASC,EAAWF,GAAGC,GAAG;AAEtB,QAAME,IAASJ,EAASC,EAAE,GAAGC,EAAE,CAAC,GAC1BG,IAASL,EAASC,EAAE,GAAGC,EAAE,CAAC;AAChC,SAAO,KAAK,KAAKE,KAAU,IAAIC,KAAU,CAAC;AAC9C;","x_google_ignoreList":[0]}
+{"version":3,"file":"visualization.es200.js","sources":["../../../node_modules/.pnpm/@visx+event@4.0.0_@types+react@19.2.14_react@19.2.4/node_modules/@visx/event/esm/localPointGeneric.js"],"sourcesContent":["import { Point } from '@visx/point';\nimport { isSVGElement, isSVGGraphicsElement, isSVGSVGElement } from \"./typeGuards.js\";\nimport getXAndYFromEvent from \"./getXAndYFromEvent.js\";\nexport default function localPoint(node, event) {\n  if (!node || !event) return null;\n  const coords = getXAndYFromEvent(event);\n\n  // find top-most SVG\n  const svg = isSVGElement(node) ? node.ownerSVGElement : node;\n  const screenCTM = isSVGGraphicsElement(svg) ? svg.getScreenCTM() : null;\n  if (isSVGSVGElement(svg) && screenCTM) {\n    let point = svg.createSVGPoint();\n    point.x = coords.x;\n    point.y = coords.y;\n    point = point.matrixTransform(screenCTM.inverse());\n    return new Point({\n      x: point.x,\n      y: point.y\n    });\n  }\n\n  // fall back to bounding box\n  const rect = node.getBoundingClientRect();\n  return new Point({\n    x: coords.x - rect.left - node.clientLeft,\n    y: coords.y - rect.top - node.clientTop\n  });\n}"],"names":["localPoint","node","event","coords","getXAndYFromEvent","svg","isSVGElement","screenCTM","isSVGGraphicsElement","isSVGSVGElement","point","Point","rect"],"mappings":";;;AAGe,SAASA,EAAWC,GAAMC,GAAO;AAC9C,MAAI,CAACD,KAAQ,CAACC,EAAO,QAAO;AAC5B,QAAMC,IAASC,EAAkBF,CAAK,GAGhCG,IAAMC,EAAaL,CAAI,IAAIA,EAAK,kBAAkBA,GAClDM,IAAYC,EAAqBH,CAAG,IAAIA,EAAI,aAAY,IAAK;AACnE,MAAII,EAAgBJ,CAAG,KAAKE,GAAW;AACrC,QAAIG,IAAQL,EAAI,eAAc;AAC9B,WAAAK,EAAM,IAAIP,EAAO,GACjBO,EAAM,IAAIP,EAAO,GACjBO,IAAQA,EAAM,gBAAgBH,EAAU,QAAO,CAAE,GAC1C,IAAII,EAAM;AAAA,MACf,GAAGD,EAAM;AAAA,MACT,GAAGA,EAAM;AAAA,IACf,CAAK;AAAA,EACH;AAGA,QAAME,IAAOX,EAAK,sBAAqB;AACvC,SAAO,IAAIU,EAAM;AAAA,IACf,GAAGR,EAAO,IAAIS,EAAK,OAAOX,EAAK;AAAA,IAC/B,GAAGE,EAAO,IAAIS,EAAK,MAAMX,EAAK;AAAA,EAClC,CAAG;AACH;","x_google_ignoreList":[0]}

package/dist/visualization.es201.js

@@ -1,13 +1,31 @@
-function i(u) {
-  var e = 0, n = u.children, t = n && n.length;
-  if (!t) e = 1;
-  else for (; --t >= 0; ) e += n[t].value;
-  u.value = e;
+function t(n) {
+  return !!n && n instanceof Element;
 }
-function l() {
-  return this.eachAfter(i);
+function i(n) {
+  return !!n && (n instanceof SVGElement || "ownerSVGElement" in n);
+}
+function e(n) {
+  return !!n && "createSVGPoint" in n;
+}
+function r(n) {
+  return !!n && "getScreenCTM" in n;
+}
+function c(n) {
+  return !!n && "changedTouches" in n;
+}
+function o(n) {
+  return !!n && "clientX" in n;
+}
+function u(n) {
+  return !!n && (n instanceof Event || "nativeEvent" in n && n.nativeEvent instanceof Event);
 }
 export {
-  l as default
+  t as isElement,
+  u as isEvent,
+  o as isMouseEvent,
+  i as isSVGElement,
+  r as isSVGGraphicsElement,
+  e as isSVGSVGElement,
+  c as isTouchEvent
 };
 //# sourceMappingURL=visualization.es201.js.map

package/dist/visualization.es201.js.map

@@ -1 +1 @@
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+{"version":3,"file":"visualization.es201.js","sources":["../../../node_modules/.pnpm/@visx+event@4.0.0_@types+react@19.2.14_react@19.2.4/node_modules/@visx/event/esm/typeGuards.js"],"sourcesContent":["export function isElement(elem) {\n  return !!elem && elem instanceof Element;\n}\n\n// functional definition of isSVGElement. Note that SVGSVGElements are HTMLElements\nexport function isSVGElement(elem) {\n  return !!elem && (elem instanceof SVGElement || 'ownerSVGElement' in elem);\n}\n\n// functional definition of SVGGElement\nexport function isSVGSVGElement(elem) {\n  return !!elem && 'createSVGPoint' in elem;\n}\nexport function isSVGGraphicsElement(elem) {\n  return !!elem && 'getScreenCTM' in elem;\n}\n\n// functional definition of TouchEvent\nexport function isTouchEvent(event) {\n  return !!event && 'changedTouches' in event;\n}\n\n// functional definition of MouseEvent\nexport function isMouseEvent(event) {\n  return !!event && 'clientX' in event;\n}\n\n// functional definition of event\nexport function isEvent(event) {\n  return !!event && (event instanceof Event || 'nativeEvent' in event && event.nativeEvent instanceof Event);\n}"],"names":["isElement","elem","isSVGElement","isSVGSVGElement","isSVGGraphicsElement","isTouchEvent","event","isMouseEvent","isEvent"],"mappings":"AAAO,SAASA,EAAUC,GAAM;AAC9B,SAAO,CAAC,CAACA,KAAQA,aAAgB;AACnC;AAGO,SAASC,EAAaD,GAAM;AACjC,SAAO,CAAC,CAACA,MAASA,aAAgB,cAAc,qBAAqBA;AACvE;AAGO,SAASE,EAAgBF,GAAM;AACpC,SAAO,CAAC,CAACA,KAAQ,oBAAoBA;AACvC;AACO,SAASG,EAAqBH,GAAM;AACzC,SAAO,CAAC,CAACA,KAAQ,kBAAkBA;AACrC;AAGO,SAASI,EAAaC,GAAO;AAClC,SAAO,CAAC,CAACA,KAAS,oBAAoBA;AACxC;AAGO,SAASC,EAAaD,GAAO;AAClC,SAAO,CAAC,CAACA,KAAS,aAAaA;AACjC;AAGO,SAASE,EAAQF,GAAO;AAC7B,SAAO,CAAC,CAACA,MAAUA,aAAiB,SAAS,iBAAiBA,KAASA,EAAM,uBAAuB;AACtG;","x_google_ignoreList":[0]}

package/dist/visualization.es202.js

@@ -1,10 +1,36 @@
-function i(t, e) {
-  let n = -1;
-  for (const o of this)
-    t.call(e, o, ++n, this);
-  return this;
+import s from "react";
+import { parseMergedHandlers as a, Controller as f } from "./visualization.es518.js";
+import { r as u, e as d, f as l, s as p, w as m, m as g, h } from "./visualization.es519.js";
+import { C as H, E as R } from "./visualization.es519.js";
+function A(n, r = {}, t, o) {
+  const e = s.useMemo(() => new f(n), []);
+  if (e.applyHandlers(n, o), e.applyConfig(r, t), s.useEffect(e.effect.bind(e)), s.useEffect(() => e.clean.bind(e), []), r.target === void 0)
+    return e.bind.bind(e);
+}
+function E(n) {
+  return n.forEach(u), function(t, o) {
+    const {
+      handlers: e,
+      nativeHandlers: i,
+      config: c
+    } = a(t, o || {});
+    return A(e, c, void 0, i);
+  };
+}
+function M(n, r) {
+  return E([d, l, p, m, g, h])(n, r || {});
 }
 export {
-  i as default
+  H as ConfigResolverMap,
+  R as EngineMap,
+  E as createUseGesture,
+  d as dragAction,
+  h as hoverAction,
+  g as moveAction,
+  l as pinchAction,
+  u as registerAction,
+  p as scrollAction,
+  M as useGesture,
+  m as wheelAction
 };
 //# sourceMappingURL=visualization.es202.js.map

package/dist/visualization.es202.js.map

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package/dist/visualization.es203.js

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-    if (o.call(r, e, ++t, this), n = e.children)
-      for (i = n.length - 1; i >= 0; --i)
-        h.push(n[i]);
-  return this;
+function k() {
+  return {
+    scaleX: 1,
+    scaleY: 1,
+    translateX: 0,
+    translateY: 0,
+    skewX: 0,
+    skewY: 0
+  };
+}
+function u(e) {
+  let {
+    scaleX: s = 1,
+    scaleY: n = 1,
+    translateX: t = 0,
+    translateY: c = 0,
+    skewX: a = 0,
+    skewY: l = 0
+  } = e;
+  return {
+    scaleX: s,
+    scaleY: n,
+    translateX: t,
+    translateY: c,
+    skewX: a,
+    skewY: l
+  };
+}
+function X(e) {
+  let {
+    scaleX: s,
+    scaleY: n,
+    translateX: t,
+    translateY: c,
+    skewX: a,
+    skewY: l
+  } = e;
+  const r = s * n - l * a;
+  return {
+    scaleX: n / r,
+    scaleY: s / r,
+    translateX: (n * t - a * c) / -r,
+    translateY: (l * t - s * c) / r,
+    skewX: a / -r,
+    skewY: l / -r
+  };
+}
+function o(e, s) {
+  let {
+    x: n,
+    y: t
+  } = s;
+  return {
+    x: e.scaleX * n + e.skewX * t + e.translateX,
+    y: e.skewY * n + e.scaleY * t + e.translateY
+  };
+}
+function f(e, s) {
+  let {
+    x: n,
+    y: t
+  } = s;
+  return o(X(e), {
+    x: n,
+    y: t
+  });
+}
+function M(e) {
+  const n = (arguments.length > 1 && arguments[1] !== void 0 ? arguments[1] : void 0) || e;
+  return u({
+    scaleX: e,
+    scaleY: n
+  });
+}
+function g(e, s) {
+  return u({
+    translateX: e,
+    translateY: s
+  });
+}
+function Y(e, s) {
+  return {
+    scaleX: e.scaleX * s.scaleX + e.skewX * s.skewY,
+    scaleY: e.skewY * s.skewX + e.scaleY * s.scaleY,
+    translateX: e.scaleX * s.translateX + e.skewX * s.translateY + e.translateX,
+    translateY: e.skewY * s.translateX + e.scaleY * s.translateY + e.translateY,
+    skewX: e.scaleX * s.skewX + e.skewX * s.scaleY,
+    skewY: e.skewY * s.scaleX + e.scaleY * s.skewY
+  };
+}
+function w() {
+  for (var e = arguments.length, s = new Array(e), n = 0; n < e; n++)
+    s[n] = arguments[n];
+  switch (s.length) {
+    case 0:
+      throw new Error("composeMatrices() requires arguments: was called with no args");
+    case 1:
+      return s[0];
+    case 2:
+      return Y(s[0], s[1]);
+    default: {
+      const [t, c, ...a] = s, l = Y(t, c);
+      return w(l, ...a);
+    }
+  }
 }
 export {
-  d as default
+  f as applyInverseMatrixToPoint,
+  o as applyMatrixToPoint,
+  w as composeMatrices,
+  u as createMatrix,
+  k as identityMatrix,
+  X as inverseMatrix,
+  Y as multiplyMatrices,
+  M as scaleMatrix,
+  g as translateMatrix
 };
 //# sourceMappingURL=visualization.es203.js.map

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package/dist/visualization.es204.js

@@ -1,13 +1,13 @@
-function p(o, r) {
-  for (var e = this, i = [e], t = [], h, n, l, d = -1; e = i.pop(); )
-    if (t.push(e), h = e.children)
-      for (n = 0, l = h.length; n < l; ++n)
-        i.push(h[n]);
-  for (; e = t.pop(); )
-    o.call(r, e, ++d, this);
-  return this;
+function i(u) {
+  var e = 0, n = u.children, t = n && n.length;
+  if (!t) e = 1;
+  else for (; --t >= 0; ) e += n[t].value;
+  u.value = e;
+}
+function l() {
+  return this.eachAfter(i);
 }
 export {
-  p as default
+  l as default
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package/dist/visualization.es205.js

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+function i(t, e) {
+  let n = -1;
+  for (const o of this)
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+  return this;
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package/dist/visualization.es206.js

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-  });
+function d(o, r) {
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+    if (o.call(r, e, ++t, this), n = e.children)
+      for (i = n.length - 1; i >= 0; --i)
+        h.push(n[i]);
+  return this;
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package/dist/visualization.es207.js

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-  return this.eachBefore(function(e) {
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-  });
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+  for (var e = this, i = [e], t = [], h, n, l, d = -1; e = i.pop(); )
+    if (t.push(e), h = e.children)
+      for (n = 0, l = h.length; n < l; ++n)
+        i.push(h[n]);
+  for (; e = t.pop(); )
+    o.call(r, e, ++d, this);
+  return this;
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package/dist/visualization.es208.js

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-  for (t = r.pop(), e = o.pop(); t === e; )
-    s = t, t = r.pop(), e = o.pop();
-  return s;
+function f(t, e) {
+  let o = -1;
+  for (const n of this)
+    if (t.call(e, n, ++o, this))
+      return n;
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+  f as default
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package/dist/visualization.es209.js

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-  for (var e = this, n = [e]; e = e.parent; )
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-  return n;
+function l(i) {
+  return this.eachAfter(function(e) {
+    for (var a = +i(e.data) || 0, t = e.children, u = t && t.length; --u >= 0; ) a += t[u].value;
+    e.value = a;
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