@weng-lab/ui-components 3.0.0-beta.0 → 3.0.1

package/dist/ui-components.es87.js

@@ -1,174 +1,212 @@
-import * as h from "react";
-import o from "./ui-components.es89.js";
-import { clsx as P } from "./ui-components.es94.js";
-import T from "./ui-components.es145.js";
-import j from "./ui-components.es146.js";
-import I from "./ui-components.es95.js";
-import b, { getInputAdornmentUtilityClass as A } from "./ui-components.es257.js";
-import { j as i } from "./ui-components.es15.js";
-import { useDefaultProps as C } from "./ui-components.es92.js";
-import N from "./ui-components.es25.js";
-import f from "./ui-components.es117.js";
-import R from "./ui-components.es98.js";
-import O from "./ui-components.es34.js";
-var y;
-const w = (t, e) => {
-  const {
-    ownerState: n
-  } = t;
-  return [e.root, e[`position${f(n.position)}`], n.disablePointerEvents === !0 && e.disablePointerEvents, e[n.variant]];
-}, L = (t) => {
-  const {
-    classes: e,
-    disablePointerEvents: n,
-    hiddenLabel: a,
-    position: r,
-    size: p,
-    variant: l
-  } = t, d = {
-    root: ["root", n && "disablePointerEvents", r && `position${f(r)}`, l, a && "hiddenLabel", p && `size${f(p)}`]
-  };
-  return R(d, A, e);
-}, S = O("div", {
-  name: "MuiInputAdornment",
-  slot: "Root",
-  overridesResolver: w
-})(I(({
-  theme: t
-}) => ({
-  display: "flex",
-  maxHeight: "2em",
-  alignItems: "center",
-  whiteSpace: "nowrap",
-  color: (t.vars || t).palette.action.active,
-  variants: [{
-    props: {
-      variant: "filled"
-    },
-    style: {
-      [`&.${b.positionStart}&:not(.${b.hiddenLabel})`]: {
-        marginTop: 16
-      }
-    }
-  }, {
-    props: {
-      position: "start"
-    },
-    style: {
-      marginRight: 8
-    }
-  }, {
-    props: {
-      position: "end"
-    },
-    style: {
-      marginLeft: 8
-    }
-  }, {
-    props: {
-      disablePointerEvents: !0
-    },
-    style: {
-      pointerEvents: "none"
-    }
+const l = {
+  adipose: [{
+    label: "All Biosamples",
+    filename: "adipose.noccl.cCREs.bed"
+  }],
+  adrenal_gland: [{
+    label: "All Biosamples",
+    filename: "adrenal_gland.noccl.cCREs.bed"
+  }],
+  blood: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "blood.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "blood.all.cCREs.bed"
+  }],
+  blood_vessel: [{
+    label: "All Biosamples",
+    filename: "blood_vessel.noccl.cCREs.bed"
+  }],
+  bone: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "bone.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "bone.all.cCREs.bed"
+  }],
+  bone_marrow: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "bone_marrow.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "bone_marrow.all.cCREs.bed"
+  }],
+  brain: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "brain.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "brain.all.cCREs.bed"
+  }],
+  breast: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "breast.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "breast.all.cCREs.bed"
+  }],
+  connective_tissue: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "connective_tissue.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "connective_tissue.all.cCREs.bed"
+  }],
+  embryo: [{
+    label: "All Biosamples",
+    filename: "embryo.noccl.cCREs.bed"
+  }],
+  epithelium: [{
+    label: "All Biosamples",
+    filename: "epithelium.noccl.cCREs.bed"
+  }],
+  esophagus: [{
+    label: "All Biosamples",
+    filename: "esophagus.noccl.cCREs.bed"
+  }],
+  eye: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "eye.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "eye.all.cCREs.bed"
+  }],
+  heart: [{
+    label: "All Biosamples",
+    filename: "heart.noccl.cCREs.bed"
+  }],
+  kidney: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "kidney.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "kidney.all.cCREs.bed"
+  }],
+  large_intestine: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "large_intestine.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "large_intestine.all.cCREs.bed"
+  }],
+  limb: [{
+    label: "All Biosamples",
+    filename: "limb.noccl.cCREs.bed"
+  }],
+  liver: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "liver.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "liver.all.cCREs.bed"
+  }],
+  lung: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "lung.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "lung.all.cCREs.bed"
+  }],
+  lymphoid_tissue: [{
+    label: "All Biosamples",
+    filename: "lymphoid_tissue.noccl.cCREs.bed"
+  }],
+  mouth: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "mouth.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "mouth.all.cCREs.bed"
+  }],
+  muscle: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "muscle.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "muscle.all.cCREs.bed"
+  }],
+  nerve: [{
+    label: "All Biosamples",
+    filename: "nerve.noccl.cCREs.bed"
+  }],
+  ovary: [{
+    label: "All Biosamples",
+    filename: "ovary.noccl.cCREs.bed"
+  }],
+  pancreas: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "pancreas.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "pancreas.all.cCREs.bed"
+  }],
+  penis: [{
+    label: "All Biosamples",
+    filename: "penis.noccl.cCREs.bed"
+  }],
+  placenta: [{
+    label: "All Biosamples",
+    filename: "placenta.noccl.cCREs.bed"
+  }],
+  prostate: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "prostate.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "prostate.all.cCREs.bed"
+  }],
+  skin: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "skin.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "skin.all.cCREs.bed"
+  }],
+  small_intestine: [{
+    label: "All Biosamples",
+    filename: "small_intestine.noccl.cCREs.bed"
+  }],
+  spinal_cord: [{
+    label: "All Biosamples",
+    filename: "spinal_cord.noccl.cCREs.bed"
+  }],
+  spleen: [{
+    label: "All Biosamples",
+    filename: "spleen.noccl.cCREs.bed"
+  }],
+  stomach: [{
+    label: "All Biosamples",
+    filename: "stomach.noccl.cCREs.bed"
+  }],
+  testis: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "testis.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "testis.all.cCREs.bed"
+  }],
+  thymus: [{
+    label: "All Biosamples",
+    filename: "thymus.noccl.cCREs.bed"
+  }],
+  thyroid: [{
+    label: "All Biosamples",
+    filename: "thyroid.noccl.cCREs.bed"
+  }],
+  uterus: [{
+    label: "Excluding Cancer Cell Lines",
+    filename: "uterus.noccl.cCREs.bed"
+  }, {
+    label: "All Biosamples",
+    filename: "uterus.all.cCREs.bed"
+  }],
+  vagina: [{
+    label: "All Biosamples",
+    filename: "vagina.noccl.cCREs.bed"
   }]
-}))), z = /* @__PURE__ */ h.forwardRef(function(e, n) {
-  const a = C({
-    props: e,
-    name: "MuiInputAdornment"
-  }), {
-    children: r,
-    className: p,
-    component: l = "div",
-    disablePointerEvents: d = !1,
-    disableTypography: x = !1,
-    position: u,
-    variant: m,
-    ...g
-  } = a, s = j() || {};
-  let c = m;
-  m && s.variant && process.env.NODE_ENV !== "production" && m === s.variant && console.error("MUI: The `InputAdornment` variant infers the variant prop you do not have to provide one."), s && !c && (c = s.variant);
-  const v = {
-    ...a,
-    hiddenLabel: s.hiddenLabel,
-    size: s.size,
-    disablePointerEvents: d,
-    position: u,
-    variant: c
-  }, E = L(v);
-  return /* @__PURE__ */ i.jsx(T.Provider, {
-    value: null,
-    children: /* @__PURE__ */ i.jsx(S, {
-      as: l,
-      ownerState: v,
-      className: P(E.root, p),
-      ref: n,
-      ...g,
-      children: typeof r == "string" && !x ? /* @__PURE__ */ i.jsx(N, {
-        color: "textSecondary",
-        children: r
-      }) : /* @__PURE__ */ i.jsxs(h.Fragment, {
-        children: [u === "start" ? (
-          /* notranslate needed while Google Translate will not fix zero-width space issue */
-          y || (y = /* @__PURE__ */ i.jsx("span", {
-            className: "notranslate",
-            "aria-hidden": !0,
-            children: "​"
-          }))
-        ) : null, r]
-      })
-    })
-  });
-});
-process.env.NODE_ENV !== "production" && (z.propTypes = {
-  // ┌────────────────────────────── Warning ──────────────────────────────┐
-  // │ These PropTypes are generated from the TypeScript type definitions. │
-  // │    To update them, edit the d.ts file and run `pnpm proptypes`.     │
-  // └─────────────────────────────────────────────────────────────────────┘
-  /**
-   * The content of the component, normally an `IconButton` or string.
-   */
-  children: o.node,
-  /**
-   * Override or extend the styles applied to the component.
-   */
-  classes: o.object,
-  /**
-   * @ignore
-   */
-  className: o.string,
-  /**
-   * The component used for the root node.
-   * Either a string to use a HTML element or a component.
-   */
-  component: o.elementType,
-  /**
-   * Disable pointer events on the root.
-   * This allows for the content of the adornment to focus the `input` on click.
-   * @default false
-   */
-  disablePointerEvents: o.bool,
-  /**
-   * If children is a string then disable wrapping in a Typography component.
-   * @default false
-   */
-  disableTypography: o.bool,
-  /**
-   * The position this adornment should appear relative to the `Input`.
-   */
-  position: o.oneOf(["end", "start"]).isRequired,
-  /**
-   * The system prop that allows defining system overrides as well as additional CSS styles.
-   */
-  sx: o.oneOfType([o.arrayOf(o.oneOfType([o.func, o.object, o.bool])), o.func, o.object]),
-  /**
-   * The variant to use.
-   * Note: If you are using the `TextField` component or the `FormControl` component
-   * you do not have to set this manually.
-   */
-  variant: o.oneOf(["filled", "outlined", "standard"])
-});
+};
 export {
-  z as default
+  l as ontologyDownloadMap
 };
 //# sourceMappingURL=ui-components.es87.js.map

package/dist/ui-components.es87.js.map

@@ -1 +1 @@
-{"version":3,"file":"ui-components.es87.js","sources":["../../../node_modules/.pnpm/@mui+material@7.3.9_@emotion+react@11.14.0_@types+react@19.2.14_react@19.2.4__@emotion+_5efc65b7a21bb615fd4ee8d4bf58b896/node_modules/@mui/material/esm/InputAdornment/InputAdornment.js"],"sourcesContent":["'use client';\n\nvar _span;\nimport * as React from 'react';\nimport PropTypes from 'prop-types';\nimport clsx from 'clsx';\nimport composeClasses from '@mui/utils/composeClasses';\nimport capitalize from \"../utils/capitalize.js\";\nimport Typography from \"../Typography/index.js\";\nimport FormControlContext from \"../FormControl/FormControlContext.js\";\nimport useFormControl from \"../FormControl/useFormControl.js\";\nimport { styled } from \"../zero-styled/index.js\";\nimport memoTheme from \"../utils/memoTheme.js\";\nimport { useDefaultProps } from \"../DefaultPropsProvider/index.js\";\nimport inputAdornmentClasses, { getInputAdornmentUtilityClass } from \"./inputAdornmentClasses.js\";\nimport { jsx as _jsx, jsxs as _jsxs } from \"react/jsx-runtime\";\nconst overridesResolver = (props, styles) => {\n  const {\n    ownerState\n  } = props;\n  return [styles.root, styles[`position${capitalize(ownerState.position)}`], ownerState.disablePointerEvents === true && styles.disablePointerEvents, styles[ownerState.variant]];\n};\nconst useUtilityClasses = ownerState => {\n  const {\n    classes,\n    disablePointerEvents,\n    hiddenLabel,\n    position,\n    size,\n    variant\n  } = ownerState;\n  const slots = {\n    root: ['root', disablePointerEvents && 'disablePointerEvents', position && `position${capitalize(position)}`, variant, hiddenLabel && 'hiddenLabel', size && `size${capitalize(size)}`]\n  };\n  return composeClasses(slots, getInputAdornmentUtilityClass, classes);\n};\nconst InputAdornmentRoot = styled('div', {\n  name: 'MuiInputAdornment',\n  slot: 'Root',\n  overridesResolver\n})(memoTheme(({\n  theme\n}) => ({\n  display: 'flex',\n  maxHeight: '2em',\n  alignItems: 'center',\n  whiteSpace: 'nowrap',\n  color: (theme.vars || theme).palette.action.active,\n  variants: [{\n    props: {\n      variant: 'filled'\n    },\n    style: {\n      [`&.${inputAdornmentClasses.positionStart}&:not(.${inputAdornmentClasses.hiddenLabel})`]: {\n        marginTop: 16\n      }\n    }\n  }, {\n    props: {\n      position: 'start'\n    },\n    style: {\n      marginRight: 8\n    }\n  }, {\n    props: {\n      position: 'end'\n    },\n    style: {\n      marginLeft: 8\n    }\n  }, {\n    props: {\n      disablePointerEvents: true\n    },\n    style: {\n      pointerEvents: 'none'\n    }\n  }]\n})));\nconst InputAdornment = /*#__PURE__*/React.forwardRef(function InputAdornment(inProps, ref) {\n  const props = useDefaultProps({\n    props: inProps,\n    name: 'MuiInputAdornment'\n  });\n  const {\n    children,\n    className,\n    component = 'div',\n    disablePointerEvents = false,\n    disableTypography = false,\n    position,\n    variant: variantProp,\n    ...other\n  } = props;\n  const muiFormControl = useFormControl() || {};\n  let variant = variantProp;\n  if (variantProp && muiFormControl.variant) {\n    if (process.env.NODE_ENV !== 'production') {\n      if (variantProp === muiFormControl.variant) {\n        console.error('MUI: The `InputAdornment` variant infers the variant prop ' + 'you do not have to provide one.');\n      }\n    }\n  }\n  if (muiFormControl && !variant) {\n    variant = muiFormControl.variant;\n  }\n  const ownerState = {\n    ...props,\n    hiddenLabel: muiFormControl.hiddenLabel,\n    size: muiFormControl.size,\n    disablePointerEvents,\n    position,\n    variant\n  };\n  const classes = useUtilityClasses(ownerState);\n  return /*#__PURE__*/_jsx(FormControlContext.Provider, {\n    value: null,\n    children: /*#__PURE__*/_jsx(InputAdornmentRoot, {\n      as: component,\n      ownerState: ownerState,\n      className: clsx(classes.root, className),\n      ref: ref,\n      ...other,\n      children: typeof children === 'string' && !disableTypography ? /*#__PURE__*/_jsx(Typography, {\n        color: \"textSecondary\",\n        children: children\n      }) : /*#__PURE__*/_jsxs(React.Fragment, {\n        children: [position === 'start' ? (/* notranslate needed while Google Translate will not fix zero-width space issue */_span || (_span = /*#__PURE__*/_jsx(\"span\", {\n          className: \"notranslate\",\n          \"aria-hidden\": true,\n          children: \"\\u200B\"\n        }))) : null, children]\n      })\n    })\n  });\n});\nprocess.env.NODE_ENV !== \"production\" ? 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package/dist/ui-components.es88.js

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-  let e;
-  function t(...c) {
-    const n = () => {
-      o.apply(this, c);
-    };
-    clearTimeout(e), e = setTimeout(n, u);
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-  return t.clear = () => {
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+  i as clsx,
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package/dist/ui-components.es89.js

@@ -1,5 +1,5 @@
-import { getDefaultExportFromCjs as r } from "./ui-components.es191.js";
-import { __require as o } from "./ui-components.es215.js";
+import { getDefaultExportFromCjs as r } from "./ui-components.es99.js";
+import { __require as o } from "./ui-components.es101.js";
 var p = /* @__PURE__ */ o();
 const s = /* @__PURE__ */ r(p);
 export {

package/dist/ui-components.es9.js

@@ -3,8 +3,8 @@ import { c as B } from "./ui-components.es16.js";
 import { useState as C } from "react";
 import { Box as E, Tooltip as T, IconButton as k } from "@mui/material";
 import { Download as L } from "@mui/icons-material";
-import { formatFileSize as M, fetchFileSize as R } from "./ui-components.es52.js";
-import { useDownloadContext as H } from "./ui-components.es51.js";
+import { formatFileSize as M, fetchFileSize as R } from "./ui-components.es56.js";
+import { useDownloadContext as H } from "./ui-components.es55.js";
 const P = (g) => {
   const e = B.c(36), {
     message: p,

package/dist/ui-components.es90.js

@@ -1,12 +1,6 @@
-import * as o from "react";
-import r from "./ui-components.es197.js";
-import t from "./ui-components.es103.js";
-import m from "./ui-components.es198.js";
-function i() {
-  const e = m(r);
-  return process.env.NODE_ENV !== "production" && o.useDebugValue(e), e[t] || e;
-}
+import e from "./ui-components.es120.js";
+const o = e;
 export {
-  i as default
+  o as default
 };
 //# sourceMappingURL=ui-components.es90.js.map

package/dist/ui-components.es90.js.map

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+{"version":3,"file":"ui-components.es90.js","sources":["../../../node_modules/.pnpm/@mui+material@7.3.9_@emotion+react@11.14.0_@types+react@19.2.14_react@19.2.4__@emotion+_5efc65b7a21bb615fd4ee8d4bf58b896/node_modules/@mui/material/esm/utils/memoTheme.js"],"sourcesContent":["import { unstable_memoTheme } from '@mui/system';\nconst memoTheme = unstable_memoTheme;\nexport default memoTheme;"],"names":["memoTheme","unstable_memoTheme"],"mappings":";AACK,MAACA,IAAYC;","x_google_ignoreList":[0]}

package/dist/ui-components.es91.js

@@ -1,115 +1,10 @@
-import * as m from "react";
-import e from "./ui-components.es89.js";
-import { clsx as U } from "./ui-components.es94.js";
-import { generateGridColumnsStyles as q, generateGridColumnSpacingStyles as B, generateGridRowSpacingStyles as F, generateGridSizeStyles as H, generateGridDirectionStyles as I, generateGridStyles as J, generateGridOffsetStyles as K, generateDirectionClasses as Q, generateSizeClassNames as W, generateSpacingClassNames as X } from "./ui-components.es282.js";
-import Y from "./ui-components.es283.js";
-import { j as Z } from "./ui-components.es15.js";
-import V from "./ui-components.es198.js";
-import ee from "./ui-components.es221.js";
-import re from "./ui-components.es249.js";
-import ne from "./ui-components.es284.js";
-import oe from "./ui-components.es285.js";
-import te from "./ui-components.es98.js";
-import se from "./ui-components.es99.js";
-import ie from "./ui-components.es269.js";
-const ae = ie(), ce = ne("div", {
-  name: "MuiGrid",
-  slot: "Root"
-});
-function me(p) {
-  return oe({
-    props: p,
-    name: "MuiGrid",
-    defaultTheme: ae
-  });
-}
-function je(p = {}) {
-  const {
-    // This will allow adding custom styled fn (for example for custom sx style function)
-    createStyledComponent: S = ce,
-    useThemeProps: T = me,
-    useTheme: w = V,
-    componentName: G = "MuiGrid"
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-      direction: o,
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-      columns: g = 12,
-      container: b = !1,
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-      rowSpacing: E = y,
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-      ...R
-    } = r, k = d(P, o.breakpoints, (i) => i !== !1), D = d(x, o.breakpoints), M = n.columns ?? (c ? void 0 : g), _ = n.spacing ?? (c ? void 0 : y), A = n.rowSpacing ?? n.spacing ?? (c ? void 0 : E), $ = n.columnSpacing ?? n.spacing ?? (c ? void 0 : z), O = {
-      ...r,
-      level: c,
-      columns: M,
-      container: b,
-      direction: h,
-      wrap: N,
-      spacing: _,
-      rowSpacing: A,
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-    return /* @__PURE__ */ Z.jsx(v, {
-      ref: a,
-      as: C,
-      ownerState: O,
-      className: U(L.root, l),
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-      children: m.Children.map(u, (i) => /* @__PURE__ */ m.isValidElement(i) && re(i, ["Grid"]) && b && i.props.container ? /* @__PURE__ */ m.cloneElement(i, {
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-      }) : i)
-    });
-  });
-  return process.env.NODE_ENV !== "production" && (f.propTypes = {
-    children: e.node,
-    className: e.string,
-    columns: e.oneOfType([e.arrayOf(e.number), e.number, e.object]),
-    columnSpacing: e.oneOfType([e.arrayOf(e.oneOfType([e.number, e.string])), e.number, e.object, e.string]),
-    component: e.elementType,
-    container: e.bool,
-    direction: e.oneOfType([e.oneOf(["column-reverse", "column", "row-reverse", "row"]), e.arrayOf(e.oneOf(["column-reverse", "column", "row-reverse", "row"])), e.object]),
-    offset: e.oneOfType([e.string, e.number, e.arrayOf(e.oneOfType([e.string, e.number])), e.object]),
-    rowSpacing: e.oneOfType([e.arrayOf(e.oneOfType([e.number, e.string])), e.number, e.object, e.string]),
-    size: e.oneOfType([e.string, e.bool, e.number, e.arrayOf(e.oneOfType([e.string, e.bool, e.number])), e.object]),
-    spacing: e.oneOfType([e.arrayOf(e.oneOfType([e.number, e.string])), e.number, e.object, e.string]),
-    sx: e.oneOfType([e.arrayOf(e.oneOfType([e.func, e.object, e.bool])), e.func, e.object]),
-    wrap: e.oneOf(["nowrap", "wrap-reverse", "wrap"])
-  }), f.muiName = "Grid", f;
+import e from "./ui-components.es95.js";
+import i from "./ui-components.es96.js";
+function l(t) {
+  return e("MuiSkeleton", t);
 }
+i("MuiSkeleton", ["root", "text", "rectangular", "rounded", "circular", "pulse", "wave", "withChildren", "fitContent", "heightAuto"]);
 export {
-  je as default
+  l as getSkeletonUtilityClass
 };
 //# sourceMappingURL=ui-components.es91.js.map