@weng-lab/genomebrowser-ui 0.4.0-beta.2 → 0.4.1

package/src/TrackSelect/Folders/biosamples/human.ts

@@ -1,5 +1,5 @@
 import { createBiosampleFolder } from "./shared/createFolder";
-import humanData from "./data/human_with_wgbs.json";
+import humanData from "./data/humans_fixed.json";
 import { BiosampleDataFile } from "./shared/types";
 
 /**

package/src/TrackSelect/Folders/biosamples/shared/columns.tsx

@@ -8,13 +8,13 @@ import { Stack, capitalize } from "@mui/material";
 import { AssayIcon, ontologyTypes, assayTypes, lifeStages } from "./constants";
 import { BiosampleRowInfo, CollectionType } from "./types";
 
-const collectionTypes: CollectionType[] = ["Core", "Ancillary", "Partial"];
+const collectionTypes: CollectionType[] = ["Core", "Ancillary", "Partial", "NA"];
 
 function CollectionCell(params: GridRenderCellParams<BiosampleRowInfo>) {
   const apiRef = useGridApiContext();
 
   if (params.rowNode.type !== "group") {
-    return null;
+    return params.value ?? null;
   }
 
   const groupNode = params.rowNode as GridGroupNode;

package/src/TrackSelect/Folders/biosamples/shared/types.ts

@@ -1,4 +1,4 @@
-export type CollectionType = "Core" | "Ancillary" | "Partial";
+export type CollectionType = "Core" | "Ancillary" | "Partial" | "NA";
 
 /**
  * One assay entry from the source data. WGBS rows carry strand-specific URLs.

package/src/TrackSelect/Folders/index.ts

@@ -5,6 +5,7 @@ import { humanGenesFolder } from "./genes/human";
 import { mouseGenesFolder } from "./genes/mouse";
 import { humanOtherTracksFolder } from "./other-tracks/human";
 import { humanMohdFolder } from "./mohd/human";
+import { humanPsychscreenFolder } from "./psychscreen/human";
 
 export { type Assembly, type FolderDefinition, type FolderView } from "./types";
 
@@ -14,6 +15,8 @@ export type { GeneRowInfo } from "./genes/shared/types";
 export type { GeneTrackContext } from "./genes/shared/toTrack";
 export type { MohdRowInfo } from "./mohd/shared/types";
 export type { MohdTrackContext } from "./mohd/shared/toTrack";
+export type { PsychscreenTrackInfo } from "./psychscreen/shared/types";
+export type { PsychscreenTrackContext } from "./psychscreen/shared/toTrack";
 export type { OtherTrackInfo } from "./other-tracks/shared/types";
 export type { OtherTracksTrackContext } from "./other-tracks/shared/toTrack";
 
@@ -23,6 +26,7 @@ export const foldersByAssembly: Record<Assembly, FolderDefinition[]> = {
     humanGenesFolder,
     humanBiosamplesFolder,
     humanMohdFolder,
+    humanPsychscreenFolder,
     humanOtherTracksFolder,
   ],
   mm10: [mouseGenesFolder, mouseBiosamplesFolder],