@wemush/wols 0.1.0 → 1.3.0

package/dist/cjs/utils/migration.js.map

@@ -0,0 +1 @@
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package/dist/cjs/validator.d.ts

@@ -0,0 +1,25 @@
+/**
+ * WOLS Specimen Validator
+ *
+ * This module provides validation functionality for WOLS specimen objects.
+ *
+ * @module validator
+ */
+import { type Specimen, type ValidationOptions, type ValidationResult } from './types.js';
+/**
+ * Validate a specimen object against the WOLS v1.3.0 schema.
+ *
+ * @param specimen - The specimen object to validate
+ * @param options - Validation options
+ * @returns ValidationResult with errors and warnings
+ *
+ * @example
+ * ```typescript
+ * const result = validateSpecimen(specimen);
+ * if (!result.valid) {
+ *   console.error('Validation errors:', result.errors);
+ * }
+ * ```
+ */
+export declare function validateSpecimen(specimen: Specimen | unknown, options?: ValidationOptions): ValidationResult;
+//# sourceMappingURL=validator.d.ts.map

package/dist/cjs/validator.d.ts.map

@@ -0,0 +1 @@
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package/dist/cjs/validator.js

@@ -15,17 +15,26 @@ const iso8601_js_1 = require("./utils/iso8601.js");
 // VALIDATION PATTERNS
 // =============================================================================
 /**
- * Pattern for valid specimen ID: wemush:[a-z0-9]+
+ * Pattern for the opt-in 'strict' ID mode (CUID-style): wemush:[a-z0-9]+
  */
-const SPECIMEN_ID_PATTERN = /^wemush:[a-z0-9]+$/;
+const SPECIMEN_ID_PATTERN_STRICT = /^wemush:[a-z0-9]+$/;
+/**
+ * Pattern for valid specimen ID with ULID suffix.
+ * ULID: 26 characters from Crockford's Base32 alphabet (excluding I, L, O, U).
+ */
+const SPECIMEN_ID_PATTERN_ULID = /^wemush:[0-9A-HJKMNP-TV-Z]{26}$/i;
+/**
+ * Pattern for valid specimen ID with UUID v4 suffix.
+ */
+const SPECIMEN_ID_PATTERN_UUID = /^wemush:[0-9a-f]{8}-[0-9a-f]{4}-[1-5][0-9a-f]{3}-[89ab][0-9a-f]{3}-[0-9a-f]{12}$/i;
 /**
  * Pattern for valid semver version: major.minor.patch
  */
 const SEMVER_PATTERN = /^\d+\.\d+\.\d+$/;
 /**
- * Pattern for valid strain generation: P, F1, F2, F3, etc.
+ * Pattern for valid strain generation: P, P1, F1, F2, G1, G2, or numeric (v1.2.0).
  */
-const GENERATION_PATTERN = /^(P|F\d+)$/;
+const GENERATION_PATTERN = /^(P|P\d+|F\d+|G\d+|\d+)$/;
 /**
  * Known WOLS specimen fields (for unknown field detection).
  */
@@ -44,6 +53,7 @@ const KNOWN_FIELDS = new Set([
     'creator',
     'custom',
     'signature',
+    '_meta', // v1.2.0: Implementation metadata namespace
 ]);
 // =============================================================================
 // HELPER FUNCTIONS
@@ -104,9 +114,17 @@ function validateType(value, errors, _options) {
     }
 }
 /**
- * Validate id field.
+ * Validate id field with flexible ID format support.
+ *
+ * WOLS requires implementations to accept any non-empty suffix after
+ * `wemush:`, so that is the default. Format checks are opt-in:
+ * - 'any': wemush:{non-empty-string} (default since v1.3.0)
+ * - 'strict': wemush:[a-z0-9]+ (CUID-style)
+ * - 'ulid': wemush:{ULID}
+ * - 'uuid': wemush:{UUID}
+ * - Custom validator function
  */
-function validateId(value, errors, _options) {
+function validateId(value, errors, options) {
     if (value === undefined || value === null) {
         errors.push(error('id', errors_js_1.WolsErrorCode.REQUIRED_FIELD, 'id is required'));
         return;
@@ -115,8 +133,43 @@ function validateId(value, errors, _options) {
         errors.push(error('id', errors_js_1.WolsErrorCode.INVALID_ID_FORMAT, 'id must be a string'));
         return;
     }
-    if (!SPECIMEN_ID_PATTERN.test(value)) {
-        errors.push(error('id', errors_js_1.WolsErrorCode.INVALID_ID_FORMAT, `id must match pattern 'wemush:[a-z0-9]+', got '${value}'`));
+    // Custom validator takes precedence
+    if (options.customIdValidator) {
+        if (!options.customIdValidator(value)) {
+            errors.push(error('id', errors_js_1.WolsErrorCode.INVALID_ID_FORMAT, `id failed custom validation: '${value}'`));
+        }
+        return;
+    }
+    // Check wemush: prefix requirement (all modes require this)
+    if (!value.startsWith('wemush:')) {
+        errors.push(error('id', errors_js_1.WolsErrorCode.INVALID_ID_FORMAT, `id must start with 'wemush:', got '${value}'`));
+        return;
+    }
+    // Get ID mode (default: 'any', as required by WOLS)
+    const mode = options.idMode ?? 'any';
+    switch (mode) {
+        case 'strict':
+            if (!SPECIMEN_ID_PATTERN_STRICT.test(value)) {
+                errors.push(error('id', errors_js_1.WolsErrorCode.INVALID_ID_FORMAT, `id must match pattern 'wemush:[a-z0-9]+', got '${value}'`));
+            }
+            break;
+        case 'ulid':
+            if (!SPECIMEN_ID_PATTERN_ULID.test(value)) {
+                errors.push(error('id', errors_js_1.WolsErrorCode.INVALID_ID_FORMAT, `id must be a valid ULID after 'wemush:' prefix, got '${value}'`));
+            }
+            break;
+        case 'uuid':
+            if (!SPECIMEN_ID_PATTERN_UUID.test(value)) {
+                errors.push(error('id', errors_js_1.WolsErrorCode.INVALID_ID_FORMAT, `id must be a valid UUID after 'wemush:' prefix, got '${value}'`));
+            }
+            break;
+        case 'any':
+            // Just check for non-empty suffix after wemush:
+            if (value.length <= 7) {
+                // 'wemush:'.length = 7
+                errors.push(error('id', errors_js_1.WolsErrorCode.INVALID_ID_FORMAT, `id suffix cannot be empty after 'wemush:'`));
+            }
+            break;
     }
 }
 /**
@@ -167,11 +220,12 @@ function validateStage(value, errors, warnings, options) {
         return; // Optional field
     }
     if (!(0, types_js_1.isGrowthStage)(value)) {
+        const stages = types_js_1.GROWTH_STAGES.join(', ');
         if (options.level === 'lenient') {
-            warnings.push(warning('stage', 'UNKNOWN_GROWTH_STAGE', `Unknown growth stage '${value}'`, 'Use one of: INOCULATION, COLONIZATION, FRUITING, HARVEST'));
+            warnings.push(warning('stage', 'UNKNOWN_GROWTH_STAGE', `Unknown growth stage '${String(value)}'`, `Use one of: ${stages}`));
         }
         else {
-            errors.push(error('stage', 'INVALID_GROWTH_STAGE', `stage must be one of INOCULATION, COLONIZATION, FRUITING, HARVEST, got '${value}'`));
+            errors.push(error('stage', 'INVALID_GROWTH_STAGE', `stage must be one of ${stages}, got '${String(value)}'`));
         }
     }
 }
@@ -198,7 +252,10 @@ function validateCreated(value, errors, warnings, options) {
 /**
  * Validate strain object.
  */
-function validateStrain(value, errors, _options) {
+function isNonNegativeInteger(value) {
+    return typeof value === 'number' && Number.isInteger(value) && value >= 0;
+}
+function validateStrain(value, errors, warnings, _options) {
     if (value === undefined || value === null) {
         return; // Optional field
     }
@@ -214,15 +271,21 @@ function validateStrain(value, errors, _options) {
     // Validate generation format if present
     if (strain.generation !== undefined) {
         if (typeof strain.generation !== 'string' || !GENERATION_PATTERN.test(strain.generation)) {
-            errors.push(error('strain.generation', errors_js_1.WolsErrorCode.INVALID_GENERATION, `strain.generation must match pattern 'P' or 'F<number>', got '${strain.generation}'`));
+            errors.push(error('strain.generation', errors_js_1.WolsErrorCode.INVALID_GENERATION, `strain.generation must be P, P<n>, F<n>, G<n> or <n>, got '${String(strain.generation)}'`));
         }
     }
-    // Validate clonalGeneration if present
-    if (strain.clonalGeneration !== undefined) {
-        if (typeof strain.clonalGeneration !== 'number' ||
-            !Number.isInteger(strain.clonalGeneration) ||
-            strain.clonalGeneration < 1) {
-            errors.push(error('strain.clonalGeneration', errors_js_1.WolsErrorCode.INVALID_FORMAT, 'strain.clonalGeneration must be a positive integer'));
+    // Validate clonalGeneration if present (0 = original culture)
+    if (strain.clonalGeneration !== undefined && !isNonNegativeInteger(strain.clonalGeneration)) {
+        errors.push(error('strain.clonalGeneration', errors_js_1.WolsErrorCode.INVALID_FORMAT, 'strain.clonalGeneration must be a non-negative integer (0 = original culture)'));
+    }
+    // Validate transferDepth if present (v1.3.0; 0 = original culture)
+    if (strain.transferDepth !== undefined) {
+        if (!isNonNegativeInteger(strain.transferDepth)) {
+            errors.push(error('strain.transferDepth', errors_js_1.WolsErrorCode.INVALID_FORMAT, `strain.transferDepth must be a non-negative integer, got ${JSON.stringify(strain.transferDepth)}`));
+        }
+        else if (isNonNegativeInteger(strain.clonalGeneration) &&
+            strain.transferDepth < strain.clonalGeneration) {
+            warnings.push(warning('strain.transferDepth', 'TRANSFER_DEPTH_BELOW_CLONAL_GENERATION', `strain.transferDepth (${strain.transferDepth}) is less than strain.clonalGeneration (${strain.clonalGeneration})`, 'transferDepth counts every transfer, including subcultures, so it should be at least clonalGeneration'));
         }
     }
     // Validate source if present (informational, no strict enum)
@@ -251,7 +314,7 @@ function checkUnknownFields(specimen, warnings, options) {
 // MAIN VALIDATION FUNCTION
 // =============================================================================
 /**
- * Validate a specimen object against the WOLS v1.1.0 schema.
+ * Validate a specimen object against the WOLS v1.3.0 schema.
  *
  * @param specimen - The specimen object to validate
  * @param options - Validation options
@@ -268,8 +331,9 @@ function checkUnknownFields(specimen, warnings, options) {
 function validateSpecimen(specimen, options = {}) {
     const errors = [];
     const warnings = [];
-    // Default options
+    // Default options - spread to include all optional properties
     const opts = {
+        ...options,
         allowUnknownFields: options.allowUnknownFields ?? false,
         level: options.level ?? 'strict',
     };
@@ -295,7 +359,7 @@ function validateSpecimen(specimen, options = {}) {
     // Validate optional fields
     validateStage(data['stage'], errors, warnings, opts);
     validateCreated(data['created'], errors, warnings, opts);
-    validateStrain(data['strain'], errors, opts);
+    validateStrain(data['strain'], errors, warnings, opts);
     // Check for unknown fields
     checkUnknownFields(data, warnings, opts);
     return {

package/dist/cjs/validator.js.map

@@ -1 +1 @@
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package/dist/esm/compact-url.js

@@ -261,4 +261,66 @@ export function parseCompactUrl(url) {
         data: result,
     };
 }
+// =============================================================================
+// CONVENIENCE METHODS (v1.2.0)
+// =============================================================================
+/**
+ * Parse a compact URL, throwing an error on failure.
+ *
+ * This is a convenience wrapper around parseCompactUrl() for cases
+ * where you prefer exceptions over result types.
+ *
+ * @param url - Compact URL to parse (wemush://v1/...)
+ * @returns SpecimenRef on success
+ * @throws WolsParseError on parse failure
+ *
+ * @example
+ * ```typescript
+ * try {
+ *   const ref = parseCompactUrlOrThrow('wemush://v1/clx1a2b3c4?s=POSTR');
+ *   console.log(ref.species); // "Pleurotus ostreatus"
+ * } catch (err) {
+ *   console.error('Failed to parse:', err.message);
+ * }
+ * ```
+ *
+ * @since 1.2.0
+ */
+export function parseCompactUrlOrThrow(url) {
+    const result = parseCompactUrl(url);
+    if (!result.success) {
+        throw result.error;
+    }
+    return result.data;
+}
+/**
+ * Parse a compact URL, returning null on failure.
+ *
+ * This is a convenience wrapper around parseCompactUrl() for cases
+ * where you want to handle failures with nullish coalescing.
+ *
+ * @param url - Compact URL to parse (wemush://v1/...)
+ * @returns SpecimenRef on success, null on failure
+ *
+ * @example
+ * ```typescript
+ * const ref = parseCompactUrlOrNull('wemush://v1/clx1a2b3c4?s=POSTR');
+ * if (ref !== null) {
+ *   console.log(ref.species);
+ * }
+ *
+ * // Or with nullish coalescing:
+ * const species = parseCompactUrlOrNull(url)?.species ?? 'Unknown';
+ * ```
+ *
+ * @since 1.2.0
+ */
+export function parseCompactUrlOrNull(url) {
+    // Guard against null/undefined/non-string input to prevent runtime errors
+    if (url === null || url === undefined || typeof url !== 'string') {
+        return null;
+    }
+    const result = parseCompactUrl(url);
+    return result.success ? result.data : null;
+}
 //# sourceMappingURL=compact-url.js.map

package/dist/esm/compact-url.js.map

@@ -1 +1 @@
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