@vitessce/constants-internal 2.0.2 → 2.0.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/index.mjs +540 -0
- package/{dist → dist-tsc}/index.js +0 -0
- package/package.json +5 -5
- package/src/constant-relationships.js +85 -0
- package/src/constant-relationships.test.js +14 -0
- package/src/constants.js +173 -0
- package/src/coordination.js +326 -0
- package/src/index.js +6 -0
- package/src/version.json +7 -0
- package/dist/constant-relationships.js +0 -76
- package/dist/constant-relationships.test.js +0 -11
- package/dist/constants.js +0 -159
- package/dist/coordination.js +0 -323
- package/dist/version.json +0 -7
package/dist/constants.js
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/**
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* This file defines the current constant values.
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* To deprecate a value, add it to ./constants-old.js
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* with a corresponding log message.
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*/
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export const ViewType = {
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DESCRIPTION: 'description',
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STATUS: 'status',
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SCATTERPLOT: 'scatterplot',
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SPATIAL: 'spatial',
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HEATMAP: 'heatmap',
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LAYER_CONTROLLER: 'layerController',
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GENOMIC_PROFILES: 'genomicProfiles',
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GATING: 'gating',
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FEATURE_LIST: 'featureList',
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OBS_SETS: 'obsSets',
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OBS_SET_SIZES: 'obsSetSizes',
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OBS_SET_FEATURE_VALUE_DISTRIBUTION: 'obsSetFeatureValueDistribution',
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FEATURE_VALUE_HISTOGRAM: 'featureValueHistogram',
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};
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export const DataType = {
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OBS_LABELS: 'obsLabels',
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OBS_EMBEDDING: 'obsEmbedding',
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OBS_LOCATIONS: 'obsLocations',
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OBS_FEATURE_MATRIX: 'obsFeatureMatrix',
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OBS_SETS: 'obsSets',
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FEATURE_LABELS: 'featureLabels',
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IMAGE: 'image',
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OBS_SEGMENTATIONS: 'obsSegmentations',
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NEIGHBORHOODS: 'neighborhoods',
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GENOMIC_PROFILES: 'genomic-profiles',
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};
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export const FileType = {
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// Joint file types
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ANNDATA_ZARR: 'anndata.zarr',
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// Atomic file types
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OBS_EMBEDDING_CSV: 'obsEmbedding.csv',
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OBS_LOCATIONS_CSV: 'obsLocations.csv',
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OBS_LABELS_CSV: 'obsLabels.csv',
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FEATURE_LABELS_CSV: 'featureLabels.csv',
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OBS_FEATURE_MATRIX_CSV: 'obsFeatureMatrix.csv',
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OBS_SEGMENTATIONS_JSON: 'obsSegmentations.json',
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OBS_SETS_CSV: 'obsSets.csv',
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OBS_SETS_JSON: 'obsSets.json',
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IMAGE_OME_ZARR: 'image.ome-zarr',
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OBS_FEATURE_MATRIX_ANNDATA_ZARR: 'obsFeatureMatrix.anndata.zarr',
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OBS_SETS_ANNDATA_ZARR: 'obsSets.anndata.zarr',
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OBS_EMBEDDING_ANNDATA_ZARR: 'obsEmbedding.anndata.zarr',
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OBS_LOCATIONS_ANNDATA_ZARR: 'obsLocations.anndata.zarr',
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OBS_SEGMENTATIONS_ANNDATA_ZARR: 'obsSegmentations.anndata.zarr',
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OBS_LABELS_ANNDATA_ZARR: 'obsLabels.anndata.zarr',
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FEATURE_LABELS_ANNDATA_ZARR: 'featureLabels.anndata.zarr',
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GENOMIC_PROFILES_ZARR: 'genomic-profiles.zarr',
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NEIGHBORHOODS_JSON: 'neighborhoods.json',
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// New file types to support old file types:
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// - cells.json
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OBS_EMBEDDING_CELLS_JSON: 'obsEmbedding.cells.json',
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OBS_SEGMENTATIONS_CELLS_JSON: 'obsSegmentations.cells.json',
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OBS_LOCATIONS_CELLS_JSON: 'obsLocations.cells.json',
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OBS_LABELS_CELLS_JSON: 'obsLabels.cells.json',
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// - cell-sets.json
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OBS_SETS_CELL_SETS_JSON: 'obsSets.cell-sets.json',
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// - genes.json
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OBS_FEATURE_MATRIX_GENES_JSON: 'obsFeatureMatrix.genes.json',
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// - clusters.json
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OBS_FEATURE_MATRIX_CLUSTERS_JSON: 'obsFeatureMatrix.clusters.json',
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// - expression-matrix.zarr
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OBS_FEATURE_MATRIX_EXPRESSION_MATRIX_ZARR: 'obsFeatureMatrix.expression-matrix.zarr',
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// - raster.json
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IMAGE_RASTER_JSON: 'image.raster.json',
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OBS_SEGMENTATIONS_RASTER_JSON: 'obsSegmentations.raster.json',
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// - molecules.json
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OBS_LOCATIONS_MOLECULES_JSON: 'obsLocations.molecules.json',
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OBS_LABELS_MOLECULES_JSON: 'obsLabels.molecules.json',
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// Legacy joint file types
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CELLS_JSON: 'cells.json',
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CELL_SETS_JSON: 'cell-sets.json',
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ANNDATA_CELL_SETS_ZARR: 'anndata-cell-sets.zarr',
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ANNDATA_CELLS_ZARR: 'anndata-cells.zarr',
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EXPRESSION_MATRIX_ZARR: 'expression-matrix.zarr',
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MOLECULES_JSON: 'molecules.json',
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RASTER_JSON: 'raster.json',
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RASTER_OME_ZARR: 'raster.ome-zarr',
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CLUSTERS_JSON: 'clusters.json',
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GENES_JSON: 'genes.json',
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ANNDATA_EXPRESSION_MATRIX_ZARR: 'anndata-expression-matrix.zarr',
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};
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/**
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* Constants representing names of coordination types,
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* to help prevent typos.
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*/
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export const CoordinationType = {
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DATASET: 'dataset',
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// Entity types
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OBS_TYPE: 'obsType',
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FEATURE_TYPE: 'featureType',
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FEATURE_VALUE_TYPE: 'featureValueType',
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OBS_LABELS_TYPE: 'obsLabelsType',
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// Other types
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EMBEDDING_TYPE: 'embeddingType',
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EMBEDDING_ZOOM: 'embeddingZoom',
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EMBEDDING_ROTATION: 'embeddingRotation',
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EMBEDDING_TARGET_X: 'embeddingTargetX',
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EMBEDDING_TARGET_Y: 'embeddingTargetY',
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EMBEDDING_TARGET_Z: 'embeddingTargetZ',
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EMBEDDING_OBS_SET_POLYGONS_VISIBLE: 'embeddingObsSetPolygonsVisible',
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EMBEDDING_OBS_SET_LABELS_VISIBLE: 'embeddingObsSetLabelsVisible',
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EMBEDDING_OBS_SET_LABEL_SIZE: 'embeddingObsSetLabelSize',
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EMBEDDING_OBS_RADIUS: 'embeddingObsRadius',
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EMBEDDING_OBS_RADIUS_MODE: 'embeddingObsRadiusMode',
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EMBEDDING_OBS_OPACITY: 'embeddingObsOpacity',
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EMBEDDING_OBS_OPACITY_MODE: 'embeddingObsOpacityMode',
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SPATIAL_ZOOM: 'spatialZoom',
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SPATIAL_ROTATION: 'spatialRotation',
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SPATIAL_TARGET_X: 'spatialTargetX',
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SPATIAL_TARGET_Y: 'spatialTargetY',
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SPATIAL_TARGET_Z: 'spatialTargetZ',
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SPATIAL_ROTATION_X: 'spatialRotationX',
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SPATIAL_ROTATION_Y: 'spatialRotationY',
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SPATIAL_ROTATION_Z: 'spatialRotationZ',
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SPATIAL_ROTATION_ORBIT: 'spatialRotationOrbit',
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SPATIAL_ORBIT_AXIS: 'spatialOrbitAxis',
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SPATIAL_AXIS_FIXED: 'spatialAxisFixed',
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HEATMAP_ZOOM_X: 'heatmapZoomX',
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HEATMAP_ZOOM_Y: 'heatmapZoomY',
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HEATMAP_TARGET_X: 'heatmapTargetX',
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HEATMAP_TARGET_Y: 'heatmapTargetY',
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OBS_FILTER: 'obsFilter',
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OBS_HIGHLIGHT: 'obsHighlight',
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OBS_SET_SELECTION: 'obsSetSelection',
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OBS_SET_HIGHLIGHT: 'obsSetHighlight',
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OBS_SET_COLOR: 'obsSetColor',
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FEATURE_FILTER: 'featureFilter',
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FEATURE_HIGHLIGHT: 'featureHighlight',
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FEATURE_SELECTION: 'featureSelection',
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FEATURE_VALUE_COLORMAP: 'featureValueColormap',
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FEATURE_VALUE_TRANSFORM: 'featureValueTransform',
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FEATURE_VALUE_COLORMAP_RANGE: 'featureValueColormapRange',
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OBS_COLOR_ENCODING: 'obsColorEncoding',
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SPATIAL_IMAGE_LAYER: 'spatialImageLayer',
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SPATIAL_SEGMENTATION_LAYER: 'spatialSegmentationLayer',
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SPATIAL_POINT_LAYER: 'spatialPointLayer',
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SPATIAL_NEIGHBORHOOD_LAYER: 'spatialNeighborhoodLayer',
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GENOMIC_ZOOM_X: 'genomicZoomX',
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GENOMIC_ZOOM_Y: 'genomicZoomY',
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GENOMIC_TARGET_X: 'genomicTargetX',
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GENOMIC_TARGET_Y: 'genomicTargetY',
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ADDITIONAL_OBS_SETS: 'additionalObsSets',
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// TODO: use obsHighlight rather than moleculeHighlight.
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MOLECULE_HIGHLIGHT: 'moleculeHighlight',
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GATING_FEATURE_SELECTION_X: 'gatingFeatureSelectionX',
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GATING_FEATURE_SELECTION_Y: 'gatingFeatureSelectionY',
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FEATURE_VALUE_TRANSFORM_COEFFICIENT: 'featureValueTransformCoefficient',
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};
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export const STATUS = {
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LOADING: 'loading',
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SUCCESS: 'success',
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ERROR: 'error',
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};
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package/dist/coordination.js
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import { CoordinationType, ViewType } from './constants';
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/**
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* Coordination types may have default values,
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* which can be defined here, and used by the
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* auto initialization strategy.
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*/
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export const DEFAULT_COORDINATION_VALUES = {
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[CoordinationType.OBS_TYPE]: 'cell',
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[CoordinationType.FEATURE_TYPE]: 'gene',
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[CoordinationType.FEATURE_VALUE_TYPE]: 'expression',
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[CoordinationType.OBS_LABELS_TYPE]: null,
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[CoordinationType.EMBEDDING_ZOOM]: null,
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[CoordinationType.EMBEDDING_ROTATION]: 0,
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[CoordinationType.EMBEDDING_TARGET_X]: null,
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[CoordinationType.EMBEDDING_TARGET_Y]: null,
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[CoordinationType.EMBEDDING_TARGET_Z]: 0,
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[CoordinationType.EMBEDDING_OBS_SET_POLYGONS_VISIBLE]: false,
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[CoordinationType.EMBEDDING_OBS_SET_LABELS_VISIBLE]: false,
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[CoordinationType.EMBEDDING_OBS_SET_LABEL_SIZE]: 14,
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[CoordinationType.EMBEDDING_OBS_RADIUS]: 1,
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[CoordinationType.EMBEDDING_OBS_RADIUS_MODE]: 'auto',
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[CoordinationType.EMBEDDING_OBS_OPACITY]: 1,
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[CoordinationType.EMBEDDING_OBS_OPACITY_MODE]: 'auto',
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[CoordinationType.SPATIAL_ZOOM]: null,
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[CoordinationType.SPATIAL_ROTATION]: 0,
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[CoordinationType.SPATIAL_TARGET_X]: null,
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[CoordinationType.SPATIAL_TARGET_Y]: null,
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[CoordinationType.SPATIAL_TARGET_Z]: null,
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[CoordinationType.SPATIAL_ROTATION_X]: null,
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[CoordinationType.SPATIAL_ROTATION_Y]: null,
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[CoordinationType.SPATIAL_ROTATION_Z]: null,
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[CoordinationType.SPATIAL_AXIS_FIXED]: false,
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[CoordinationType.SPATIAL_ROTATION_ORBIT]: 0,
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[CoordinationType.SPATIAL_ORBIT_AXIS]: 'Y',
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[CoordinationType.SPATIAL_IMAGE_LAYER]: null,
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[CoordinationType.SPATIAL_SEGMENTATION_LAYER]: null,
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[CoordinationType.SPATIAL_POINT_LAYER]: null,
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[CoordinationType.SPATIAL_NEIGHBORHOOD_LAYER]: null,
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[CoordinationType.HEATMAP_ZOOM_X]: 0,
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[CoordinationType.HEATMAP_ZOOM_Y]: 0,
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[CoordinationType.HEATMAP_TARGET_X]: 0,
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[CoordinationType.HEATMAP_TARGET_Y]: 0,
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[CoordinationType.FEATURE_VALUE_COLORMAP]: 'plasma',
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[CoordinationType.FEATURE_VALUE_COLORMAP_RANGE]: [0.0, 1.0],
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[CoordinationType.FEATURE_VALUE_TRANSFORM]: null,
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[CoordinationType.FEATURE_VALUE_TRANSFORM_COEFFICIENT]: 1,
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[CoordinationType.FEATURE_FILTER]: null,
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[CoordinationType.FEATURE_HIGHLIGHT]: null,
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[CoordinationType.FEATURE_SELECTION]: null,
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[CoordinationType.OBS_FILTER]: null,
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[CoordinationType.OBS_HIGHLIGHT]: null,
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[CoordinationType.OBS_SET_SELECTION]: null,
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[CoordinationType.OBS_SET_HIGHLIGHT]: null,
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[CoordinationType.OBS_SET_COLOR]: null,
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[CoordinationType.OBS_COLOR_ENCODING]: 'cellSetSelection',
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[CoordinationType.GENOMIC_ZOOM_X]: 0,
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[CoordinationType.GENOMIC_ZOOM_Y]: 0,
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[CoordinationType.GENOMIC_TARGET_X]: 1549999999.5,
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[CoordinationType.GENOMIC_TARGET_Y]: 1549999999.5,
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[CoordinationType.ADDITIONAL_OBS_SETS]: null,
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[CoordinationType.MOLECULE_HIGHLIGHT]: null,
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[CoordinationType.GATING_FEATURE_SELECTION_X]: null,
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[CoordinationType.GATING_FEATURE_SELECTION_Y]: null,
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};
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// The following coordination types should be
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// initialized to independent scopes when
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// initialized automatically.
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// These make the resulting view config
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// (after auto-initialization) behave
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// like "legacy" Vitessce (pre-coordination model).
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export const AUTO_INDEPENDENT_COORDINATION_TYPES = [
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CoordinationType.HEATMAP_ZOOM_X,
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CoordinationType.HEATMAP_ZOOM_Y,
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CoordinationType.HEATMAP_TARGET_X,
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CoordinationType.HEATMAP_TARGET_Y,
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CoordinationType.EMBEDDING_ZOOM,
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CoordinationType.EMBEDDING_TARGET_X,
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CoordinationType.EMBEDDING_TARGET_Y,
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CoordinationType.EMBEDDING_TARGET_Z,
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CoordinationType.EMBEDDING_OBS_SET_POLYGONS_VISIBLE,
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CoordinationType.EMBEDDING_OBS_SET_LABELS_VISIBLE,
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CoordinationType.EMBEDDING_OBS_SET_LABEL_SIZE,
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CoordinationType.EMBEDDING_OBS_RADIUS,
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CoordinationType.EMBEDDING_OBS_OPACITY,
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];
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/**
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* Mapping from component type to
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* supported coordination object types.
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* This mapping can be used to determine
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* which pieces of state that a component will
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* need to get/set.
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* Keys here are the component registry keys.
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*/
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export const COMPONENT_COORDINATION_TYPES = {
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95
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[ViewType.SCATTERPLOT]: [
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96
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CoordinationType.DATASET,
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97
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CoordinationType.OBS_TYPE,
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98
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CoordinationType.FEATURE_TYPE,
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99
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CoordinationType.FEATURE_VALUE_TYPE,
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100
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CoordinationType.OBS_LABELS_TYPE,
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101
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CoordinationType.EMBEDDING_TYPE,
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102
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CoordinationType.EMBEDDING_ZOOM,
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103
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CoordinationType.EMBEDDING_ROTATION,
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104
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CoordinationType.EMBEDDING_TARGET_X,
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105
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CoordinationType.EMBEDDING_TARGET_Y,
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106
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CoordinationType.EMBEDDING_TARGET_Z,
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107
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CoordinationType.EMBEDDING_OBS_SET_POLYGONS_VISIBLE,
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108
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CoordinationType.EMBEDDING_OBS_SET_LABELS_VISIBLE,
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109
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CoordinationType.EMBEDDING_OBS_SET_LABEL_SIZE,
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110
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CoordinationType.EMBEDDING_OBS_RADIUS,
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111
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CoordinationType.EMBEDDING_OBS_RADIUS_MODE,
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112
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CoordinationType.EMBEDDING_OBS_OPACITY,
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113
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CoordinationType.EMBEDDING_OBS_OPACITY_MODE,
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114
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CoordinationType.OBS_FILTER,
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115
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CoordinationType.OBS_HIGHLIGHT,
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116
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CoordinationType.OBS_SET_SELECTION,
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117
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CoordinationType.OBS_SET_HIGHLIGHT,
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118
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CoordinationType.OBS_SET_COLOR,
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119
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CoordinationType.FEATURE_HIGHLIGHT,
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120
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CoordinationType.FEATURE_SELECTION,
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121
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CoordinationType.FEATURE_VALUE_COLORMAP,
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122
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CoordinationType.FEATURE_VALUE_COLORMAP_RANGE,
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123
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CoordinationType.OBS_COLOR_ENCODING,
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124
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CoordinationType.ADDITIONAL_OBS_SETS,
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125
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],
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126
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[ViewType.GATING]: [
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127
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CoordinationType.DATASET,
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128
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CoordinationType.OBS_TYPE,
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129
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CoordinationType.FEATURE_TYPE,
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130
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CoordinationType.FEATURE_VALUE_TYPE,
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131
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CoordinationType.EMBEDDING_TYPE,
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132
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CoordinationType.EMBEDDING_ZOOM,
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133
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CoordinationType.EMBEDDING_ROTATION,
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134
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CoordinationType.EMBEDDING_TARGET_X,
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135
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CoordinationType.EMBEDDING_TARGET_Y,
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136
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CoordinationType.EMBEDDING_TARGET_Z,
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137
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CoordinationType.EMBEDDING_OBS_SET_POLYGONS_VISIBLE,
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138
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CoordinationType.EMBEDDING_OBS_SET_LABELS_VISIBLE,
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139
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CoordinationType.EMBEDDING_OBS_SET_LABEL_SIZE,
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140
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CoordinationType.EMBEDDING_OBS_RADIUS,
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141
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CoordinationType.EMBEDDING_OBS_RADIUS_MODE,
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142
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CoordinationType.EMBEDDING_OBS_OPACITY,
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143
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CoordinationType.EMBEDDING_OBS_OPACITY_MODE,
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144
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CoordinationType.OBS_FILTER,
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145
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CoordinationType.OBS_HIGHLIGHT,
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146
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CoordinationType.OBS_SET_SELECTION,
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147
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CoordinationType.OBS_SET_HIGHLIGHT,
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148
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CoordinationType.OBS_SET_COLOR,
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149
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CoordinationType.FEATURE_HIGHLIGHT,
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150
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CoordinationType.FEATURE_SELECTION,
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151
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CoordinationType.FEATURE_VALUE_COLORMAP,
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152
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CoordinationType.FEATURE_VALUE_COLORMAP_RANGE,
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153
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CoordinationType.OBS_COLOR_ENCODING,
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154
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CoordinationType.ADDITIONAL_OBS_SETS,
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155
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CoordinationType.FEATURE_VALUE_TRANSFORM,
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156
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CoordinationType.FEATURE_VALUE_TRANSFORM_COEFFICIENT,
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157
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CoordinationType.GATING_FEATURE_SELECTION_X,
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158
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CoordinationType.GATING_FEATURE_SELECTION_Y,
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159
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],
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160
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[ViewType.SPATIAL]: [
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161
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CoordinationType.DATASET,
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162
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CoordinationType.OBS_TYPE,
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163
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CoordinationType.OBS_LABELS_TYPE,
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164
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CoordinationType.FEATURE_TYPE,
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165
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CoordinationType.FEATURE_VALUE_TYPE,
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166
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CoordinationType.SPATIAL_ZOOM,
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167
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CoordinationType.SPATIAL_ROTATION,
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168
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CoordinationType.SPATIAL_IMAGE_LAYER,
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169
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CoordinationType.SPATIAL_SEGMENTATION_LAYER,
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170
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CoordinationType.SPATIAL_POINT_LAYER,
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171
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CoordinationType.SPATIAL_NEIGHBORHOOD_LAYER,
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172
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CoordinationType.SPATIAL_TARGET_X,
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173
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CoordinationType.SPATIAL_TARGET_Y,
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174
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CoordinationType.SPATIAL_TARGET_Z,
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175
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CoordinationType.SPATIAL_ROTATION_X,
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176
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CoordinationType.SPATIAL_ROTATION_Y,
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177
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CoordinationType.SPATIAL_ROTATION_Z,
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178
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CoordinationType.SPATIAL_ROTATION_ORBIT,
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179
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CoordinationType.SPATIAL_ORBIT_AXIS,
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180
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CoordinationType.SPATIAL_AXIS_FIXED,
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181
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CoordinationType.OBS_FILTER,
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182
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CoordinationType.OBS_HIGHLIGHT,
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183
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CoordinationType.OBS_SET_SELECTION,
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184
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CoordinationType.OBS_SET_HIGHLIGHT,
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185
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CoordinationType.OBS_SET_COLOR,
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186
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CoordinationType.FEATURE_HIGHLIGHT,
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187
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CoordinationType.FEATURE_SELECTION,
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188
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CoordinationType.FEATURE_VALUE_COLORMAP,
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189
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CoordinationType.FEATURE_VALUE_COLORMAP_RANGE,
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190
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CoordinationType.OBS_COLOR_ENCODING,
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191
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CoordinationType.ADDITIONAL_OBS_SETS,
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192
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CoordinationType.MOLECULE_HIGHLIGHT,
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193
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],
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194
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[ViewType.HEATMAP]: [
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195
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CoordinationType.DATASET,
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196
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CoordinationType.OBS_TYPE,
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197
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CoordinationType.OBS_LABELS_TYPE,
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198
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CoordinationType.FEATURE_TYPE,
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199
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CoordinationType.FEATURE_VALUE_TYPE,
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200
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CoordinationType.HEATMAP_ZOOM_X,
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201
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CoordinationType.HEATMAP_ZOOM_Y,
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202
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CoordinationType.HEATMAP_TARGET_X,
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203
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CoordinationType.HEATMAP_TARGET_Y,
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204
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CoordinationType.OBS_FILTER,
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205
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CoordinationType.OBS_HIGHLIGHT,
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206
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CoordinationType.OBS_SET_SELECTION,
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207
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CoordinationType.OBS_SET_HIGHLIGHT,
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208
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CoordinationType.OBS_SET_COLOR,
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209
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CoordinationType.FEATURE_FILTER,
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210
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CoordinationType.FEATURE_HIGHLIGHT,
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211
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CoordinationType.FEATURE_SELECTION,
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212
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CoordinationType.FEATURE_VALUE_COLORMAP,
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213
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CoordinationType.FEATURE_VALUE_COLORMAP_RANGE,
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214
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CoordinationType.OBS_COLOR_ENCODING,
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215
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CoordinationType.ADDITIONAL_OBS_SETS,
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216
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],
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217
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[ViewType.OBS_SETS]: [
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218
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CoordinationType.DATASET,
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219
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CoordinationType.OBS_TYPE,
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220
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CoordinationType.OBS_SET_SELECTION,
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221
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CoordinationType.OBS_SET_HIGHLIGHT,
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222
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CoordinationType.OBS_SET_COLOR,
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223
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CoordinationType.OBS_COLOR_ENCODING,
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224
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CoordinationType.ADDITIONAL_OBS_SETS,
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225
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CoordinationType.FEATURE_SELECTION,
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226
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],
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227
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[ViewType.OBS_SET_SIZES]: [
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228
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CoordinationType.DATASET,
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229
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CoordinationType.OBS_TYPE,
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230
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CoordinationType.OBS_SET_SELECTION,
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231
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CoordinationType.OBS_SET_HIGHLIGHT,
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232
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CoordinationType.OBS_SET_COLOR,
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233
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CoordinationType.ADDITIONAL_OBS_SETS,
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234
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],
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235
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[ViewType.STATUS]: [
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236
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CoordinationType.DATASET,
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237
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CoordinationType.OBS_HIGHLIGHT,
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238
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CoordinationType.FEATURE_HIGHLIGHT,
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239
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CoordinationType.OBS_SET_HIGHLIGHT,
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240
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CoordinationType.MOLECULE_HIGHLIGHT,
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241
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],
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242
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[ViewType.FEATURE_LIST]: [
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243
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CoordinationType.DATASET,
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244
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CoordinationType.OBS_TYPE,
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245
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CoordinationType.FEATURE_TYPE,
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246
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CoordinationType.FEATURE_VALUE_TYPE,
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247
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CoordinationType.FEATURE_FILTER,
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248
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CoordinationType.FEATURE_HIGHLIGHT,
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249
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CoordinationType.FEATURE_SELECTION,
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250
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CoordinationType.OBS_COLOR_ENCODING,
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251
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CoordinationType.OBS_SET_SELECTION,
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252
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],
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253
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[ViewType.OBS_SET_FEATURE_VALUE_DISTRIBUTION]: [
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254
|
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CoordinationType.DATASET,
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255
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CoordinationType.OBS_TYPE,
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256
|
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CoordinationType.FEATURE_TYPE,
|
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257
|
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CoordinationType.FEATURE_VALUE_TYPE,
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258
|
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CoordinationType.FEATURE_SELECTION,
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259
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CoordinationType.FEATURE_VALUE_TRANSFORM,
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260
|
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CoordinationType.FEATURE_VALUE_TRANSFORM_COEFFICIENT,
|
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261
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CoordinationType.OBS_SET_SELECTION,
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262
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CoordinationType.OBS_SET_HIGHLIGHT,
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263
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CoordinationType.OBS_SET_COLOR,
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264
|
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CoordinationType.ADDITIONAL_OBS_SETS,
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265
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],
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266
|
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[ViewType.FEATURE_VALUE_HISTOGRAM]: [
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267
|
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CoordinationType.DATASET,
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268
|
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CoordinationType.OBS_TYPE,
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269
|
-
CoordinationType.FEATURE_TYPE,
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270
|
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CoordinationType.FEATURE_VALUE_TYPE,
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271
|
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CoordinationType.FEATURE_SELECTION,
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272
|
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],
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273
|
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[ViewType.LAYER_CONTROLLER]: [
|
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274
|
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CoordinationType.DATASET,
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275
|
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CoordinationType.OBS_TYPE,
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276
|
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CoordinationType.FEATURE_TYPE,
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277
|
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CoordinationType.FEATURE_VALUE_TYPE,
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278
|
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CoordinationType.SPATIAL_IMAGE_LAYER,
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279
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CoordinationType.SPATIAL_SEGMENTATION_LAYER,
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280
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CoordinationType.SPATIAL_POINT_LAYER,
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281
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CoordinationType.SPATIAL_NEIGHBORHOOD_LAYER,
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282
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CoordinationType.SPATIAL_ZOOM,
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283
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CoordinationType.SPATIAL_TARGET_X,
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284
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CoordinationType.SPATIAL_TARGET_Y,
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285
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CoordinationType.SPATIAL_TARGET_Z,
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286
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-
CoordinationType.SPATIAL_ROTATION_X,
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287
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CoordinationType.SPATIAL_ROTATION_Y,
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288
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CoordinationType.SPATIAL_ROTATION_Z,
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289
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CoordinationType.SPATIAL_ROTATION_ORBIT,
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290
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CoordinationType.SPATIAL_ORBIT_AXIS,
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291
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],
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292
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[ViewType.GENOMIC_PROFILES]: [
|
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293
|
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CoordinationType.DATASET,
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294
|
-
CoordinationType.OBS_TYPE,
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295
|
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CoordinationType.FEATURE_TYPE,
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296
|
-
CoordinationType.FEATURE_VALUE_TYPE,
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297
|
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CoordinationType.GENOMIC_ZOOM_X,
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298
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-
CoordinationType.GENOMIC_ZOOM_Y,
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299
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CoordinationType.GENOMIC_TARGET_X,
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300
|
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CoordinationType.GENOMIC_TARGET_Y,
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301
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CoordinationType.FEATURE_FILTER,
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302
|
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CoordinationType.FEATURE_HIGHLIGHT,
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303
|
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CoordinationType.FEATURE_SELECTION,
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304
|
-
CoordinationType.OBS_SET_SELECTION,
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305
|
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CoordinationType.OBS_SET_HIGHLIGHT,
|
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306
|
-
CoordinationType.OBS_SET_COLOR,
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307
|
-
CoordinationType.ADDITIONAL_OBS_SETS,
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308
|
-
],
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309
|
-
[ViewType.DESCRIPTION]: [
|
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310
|
-
CoordinationType.DATASET,
|
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311
|
-
CoordinationType.SPATIAL_IMAGE_LAYER,
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312
|
-
],
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313
|
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higlass: [
|
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314
|
-
CoordinationType.DATASET,
|
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315
|
-
CoordinationType.GENOMIC_ZOOM_X,
|
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316
|
-
CoordinationType.GENOMIC_ZOOM_Y,
|
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317
|
-
CoordinationType.GENOMIC_TARGET_X,
|
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318
|
-
CoordinationType.GENOMIC_TARGET_Y,
|
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319
|
-
CoordinationType.FEATURE_FILTER,
|
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320
|
-
CoordinationType.FEATURE_HIGHLIGHT,
|
|
321
|
-
CoordinationType.FEATURE_SELECTION,
|
|
322
|
-
],
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323
|
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};
|