@vitessce/all 2.0.3 → 3.0.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/{deflate.8ace1ac4.mjs → deflate-f57b3163.js} +2 -2
- package/dist/hglib-1422f224.js +138925 -0
- package/dist/{index.7dac8670.mjs → index-3f1c1764.js} +67100 -52955
- package/dist/index.js +12 -0
- package/dist/{jpeg.c8011e3a.mjs → jpeg-e740c9a5.js} +1 -1
- package/dist/{lerc.ccda5eb2.mjs → lerc-01e6c4d8.js} +76 -5
- package/dist/{lzw.39876143.mjs → lzw-865bd058.js} +1 -1
- package/dist/{packbits.9e95d117.mjs → packbits-d4191efd.js} +1 -1
- package/dist/{pako.esm.4b234125.mjs → pako.esm-68f84e2a.js} +97 -15
- package/dist/{raw.0279d74b.mjs → raw-3c693341.js} +1 -1
- package/dist/{webimage.5ac7ce95.mjs → webimage-83da2258.js} +1 -1
- package/dist-tsc/Vitessce.d.ts +2 -0
- package/dist-tsc/Vitessce.d.ts.map +1 -0
- package/dist-tsc/Vitessce.js +41 -0
- package/dist-tsc/base-plugins.d.ts +854 -0
- package/dist-tsc/base-plugins.d.ts.map +1 -0
- package/dist-tsc/base-plugins.js +191 -0
- package/dist-tsc/index.d.ts +4 -0
- package/dist-tsc/index.d.ts.map +1 -0
- package/dist-tsc/index.js +3 -2
- package/dist-tsc/joint-file-types-legacy.d.ts +226 -0
- package/dist-tsc/joint-file-types-legacy.d.ts.map +1 -0
- package/dist-tsc/joint-file-types-legacy.js +266 -0
- package/dist-tsc/joint-file-types-legacy.test.d.ts +2 -0
- package/dist-tsc/joint-file-types-legacy.test.d.ts.map +1 -0
- package/dist-tsc/joint-file-types-legacy.test.js +401 -0
- package/dist-tsc/joint-file-types.d.ts +4 -0
- package/dist-tsc/joint-file-types.d.ts.map +1 -0
- package/dist-tsc/joint-file-types.js +127 -0
- package/dist-tsc/joint-file-types.test.d.ts +2 -0
- package/dist-tsc/joint-file-types.test.d.ts.map +1 -0
- package/dist-tsc/joint-file-types.test.js +128 -0
- package/dist-tsc/latest-config-schema.test.d.ts +2 -0
- package/dist-tsc/latest-config-schema.test.d.ts.map +1 -0
- package/dist-tsc/latest-config-schema.test.js +19 -0
- package/package.json +37 -21
- package/src/Vitessce.tsx +74 -0
- package/src/base-plugins.ts +362 -0
- package/src/index.ts +8 -0
- package/src/joint-file-types-legacy.test.ts +413 -0
- package/src/joint-file-types-legacy.ts +284 -0
- package/src/joint-file-types.test.ts +132 -0
- package/src/joint-file-types.ts +142 -0
- package/src/latest-config-schema.test.ts +26 -0
- package/dist/hglib.1f1ea875.mjs +0 -130303
- package/dist/index.mjs +0 -11
- package/src/index.js +0 -7
- package/src/setup.js +0 -143
@@ -0,0 +1,854 @@
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import { PluginFileType, PluginJointFileType, PluginViewType, PluginCoordinationType } from '@vitessce/plugins';
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import type { DataLoader, DataSource } from '@vitessce/plugins';
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import { z } from '@vitessce/schemas';
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export declare const baseViewTypes: PluginViewType[];
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export declare const baseFileTypes: PluginFileType<DataLoader, DataSource, z.ZodTypeAny>[];
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export declare const baseJointFileTypes: (PluginJointFileType<z.ZodObject<{
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obsLabels: z.ZodOptional<z.ZodUnion<[z.ZodObject<{
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path: z.ZodString;
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}, "strip", z.ZodTypeAny, {
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path: string;
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}, {
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path: string;
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}>, z.ZodArray<z.ZodObject<{
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path: z.ZodString;
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obsLabelsType: z.ZodString;
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}, "strip", z.ZodTypeAny, {
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path: string;
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obsLabelsType: string;
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}, {
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path: string;
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obsLabelsType: string;
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}>, "many">]>>;
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featureLabels: z.ZodOptional<z.ZodUnion<[z.ZodObject<{
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path: z.ZodString;
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}, "strip", z.ZodTypeAny, {
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path: string;
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}, {
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path: string;
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}>, z.ZodArray<z.ZodObject<{
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path: z.ZodString;
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featureLabelsType: z.ZodString;
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}, "strip", z.ZodTypeAny, {
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path: string;
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featureLabelsType: string;
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}, {
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path: string;
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featureLabelsType: string;
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}>, "many">]>>;
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obsFeatureMatrix: z.ZodOptional<z.ZodObject<{
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path: z.ZodString;
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featureFilterPath: z.ZodOptional<z.ZodString>;
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initialFeatureFilterPath: z.ZodOptional<z.ZodString>;
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}, "strip", z.ZodTypeAny, {
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path: string;
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featureFilterPath?: string | undefined;
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initialFeatureFilterPath?: string | undefined;
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}, {
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path: string;
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featureFilterPath?: string | undefined;
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initialFeatureFilterPath?: string | undefined;
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}>>;
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obsSets: z.ZodOptional<z.ZodArray<z.ZodObject<{
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name: z.ZodString;
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path: z.ZodUnion<[z.ZodString, z.ZodArray<z.ZodString, "many">]>;
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scorePath: z.ZodOptional<z.ZodString>;
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}, "strip", z.ZodTypeAny, {
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path: (string | string[]) & (string | string[] | undefined);
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name: string;
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scorePath?: string | undefined;
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}, {
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path: (string | string[]) & (string | string[] | undefined);
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name: string;
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scorePath?: string | undefined;
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}>, "many">>;
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obsLocations: z.ZodOptional<z.ZodObject<{
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path: z.ZodString;
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dims: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
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}, "strip", z.ZodTypeAny, {
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path: string;
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dims?: number[] | undefined;
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}, {
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path: string;
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dims?: number[] | undefined;
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}>>;
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obsSegmentations: z.ZodOptional<z.ZodObject<{
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path: z.ZodString;
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}, "strip", z.ZodTypeAny, {
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path: string;
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}, {
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path: string;
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}>>;
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obsEmbedding: z.ZodOptional<z.ZodUnion<[z.ZodObject<{
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path: z.ZodString;
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dims: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
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}, "strip", z.ZodTypeAny, {
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path: string;
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dims?: number[] | undefined;
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}, {
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path: string;
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dims?: number[] | undefined;
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}>, z.ZodArray<z.ZodObject<{
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path: z.ZodString;
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dims: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
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embeddingType: z.ZodString;
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}, "strip", z.ZodTypeAny, {
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path: string;
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embeddingType: string;
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dims?: number[] | undefined;
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}, {
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path: string;
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embeddingType: string;
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dims?: number[] | undefined;
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}>, "many">]>>;
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}, "strip", z.ZodTypeAny, {
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obsLabels?: {
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path: string;
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} | {
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path: string;
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obsLabelsType: string;
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}[] | undefined;
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featureLabels?: {
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path: string;
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} | {
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path: string;
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featureLabelsType: string;
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}[] | undefined;
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obsFeatureMatrix?: {
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path: string;
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featureFilterPath?: string | undefined;
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initialFeatureFilterPath?: string | undefined;
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} | undefined;
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obsSets?: {
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path: (string | string[]) & (string | string[] | undefined);
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name: string;
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scorePath?: string | undefined;
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}[] | undefined;
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obsLocations?: {
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path: string;
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dims?: number[] | undefined;
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} | undefined;
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obsSegmentations?: {
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path: string;
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} | undefined;
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obsEmbedding?: {
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path: string;
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dims?: number[] | undefined;
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} | {
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path: string;
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embeddingType: string;
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dims?: number[] | undefined;
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}[] | undefined;
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}, {
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obsLabels?: {
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path: string;
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} | {
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path: string;
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obsLabelsType: string;
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}[] | undefined;
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featureLabels?: {
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path: string;
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} | {
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path: string;
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featureLabelsType: string;
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}[] | undefined;
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obsFeatureMatrix?: {
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path: string;
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featureFilterPath?: string | undefined;
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initialFeatureFilterPath?: string | undefined;
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} | undefined;
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obsSets?: {
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path: (string | string[]) & (string | string[] | undefined);
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name: string;
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scorePath?: string | undefined;
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}[] | undefined;
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obsLocations?: {
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path: string;
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dims?: number[] | undefined;
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} | undefined;
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obsSegmentations?: {
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path: string;
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} | undefined;
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obsEmbedding?: {
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path: string;
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dims?: number[] | undefined;
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} | {
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path: string;
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embeddingType: string;
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dims?: number[] | undefined;
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}[] | undefined;
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}>> | PluginJointFileType<z.ZodObject<{
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xy: z.ZodOptional<z.ZodString>;
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poly: z.ZodOptional<z.ZodString>;
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factors: z.ZodOptional<z.ZodArray<z.ZodString, "many">>;
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mappings: z.ZodOptional<z.ZodRecord<z.ZodString, z.ZodObject<{
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key: z.ZodString;
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dims: z.ZodArray<z.ZodNumber, "many">;
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}, "strip", z.ZodTypeAny, {
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key: string;
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dims: number[];
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}, {
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key: string;
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dims: number[];
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}>>>;
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}, "strip", z.ZodTypeAny, {
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xy?: string | undefined;
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poly?: string | undefined;
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factors?: string[] | undefined;
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mappings?: Record<string, {
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key: string;
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dims: number[];
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}> | undefined;
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}, {
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xy?: string | undefined;
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poly?: string | undefined;
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factors?: string[] | undefined;
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mappings?: Record<string, {
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key: string;
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dims: number[];
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}> | undefined;
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}>> | PluginJointFileType<z.ZodArray<z.ZodObject<{
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groupName: z.ZodString;
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setName: z.ZodUnion<[z.ZodString, z.ZodArray<z.ZodString, "many">]>;
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scoreName: z.ZodOptional<z.ZodString>;
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}, "strip", z.ZodTypeAny, {
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groupName: string;
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setName: (string | string[]) & (string | string[] | undefined);
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scoreName?: string | undefined;
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}, {
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groupName: string;
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setName: (string | string[]) & (string | string[] | undefined);
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scoreName?: string | undefined;
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}>, "many">> | PluginJointFileType<z.ZodObject<{
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matrix: z.ZodString;
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geneFilter: z.ZodOptional<z.ZodString>;
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matrixGeneFilter: z.ZodOptional<z.ZodString>;
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geneAlias: z.ZodOptional<z.ZodString>;
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}, "strip", z.ZodTypeAny, {
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matrix: string;
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geneFilter?: string | undefined;
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matrixGeneFilter?: string | undefined;
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geneAlias?: string | undefined;
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}, {
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matrix: string;
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geneFilter?: string | undefined;
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matrixGeneFilter?: string | undefined;
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geneAlias?: string | undefined;
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}>> | PluginJointFileType<z.ZodNull> | PluginJointFileType<z.ZodObject<{
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schemaVersion: z.ZodLiteral<"0.0.2">;
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usePhysicalSizeScaling: z.ZodOptional<z.ZodBoolean>;
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renderLayers: z.ZodOptional<z.ZodArray<z.ZodString, "many">>;
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images: z.ZodArray<z.ZodObject<{
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name: z.ZodString;
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url: z.ZodString;
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type: z.ZodString;
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metadata: z.ZodOptional<z.ZodObject<{
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dimensions: z.ZodOptional<z.ZodArray<z.ZodObject<{
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field: z.ZodString;
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type: z.ZodEnum<["quantitative", "nominal", "ordinal", "temporal"]>;
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values: z.ZodNullable<z.ZodArray<z.ZodString, "many">>;
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}, "strip", z.ZodTypeAny, {
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values: string[] | null;
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type: "quantitative" | "nominal" | "ordinal" | "temporal";
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field: string;
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}, {
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values: string[] | null;
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type: "quantitative" | "nominal" | "ordinal" | "temporal";
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field: string;
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}>, "many">>;
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isPyramid: z.ZodOptional<z.ZodBoolean>;
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transform: z.ZodOptional<z.ZodUnion<[z.ZodObject<{
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scale: z.ZodNumber;
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translate: z.ZodObject<{
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y: z.ZodNumber;
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x: z.ZodNumber;
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}, "strip", z.ZodTypeAny, {
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x: number;
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y: number;
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}, {
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x: number;
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y: number;
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}>;
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}, "strip", z.ZodTypeAny, {
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scale: number;
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translate: {
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x: number;
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y: number;
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};
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}, {
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scale: number;
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translate: {
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x: number;
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y: number;
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};
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}>, z.ZodObject<{
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matrix: z.ZodArray<z.ZodNumber, "many">;
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}, "strip", z.ZodTypeAny, {
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matrix: number[];
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}, {
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matrix: number[];
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}>]>>;
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isBitmask: z.ZodOptional<z.ZodBoolean>;
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omeTiffOffsetsUrl: z.ZodOptional<z.ZodString>;
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}, "strip", z.ZodTypeAny, {
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dimensions?: {
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values: string[] | null;
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type: "quantitative" | "nominal" | "ordinal" | "temporal";
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field: string;
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}[] | undefined;
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isPyramid?: boolean | undefined;
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transform?: {
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scale: number;
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translate: {
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x: number;
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y: number;
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};
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} | {
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matrix: number[];
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} | undefined;
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isBitmask?: boolean | undefined;
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omeTiffOffsetsUrl?: string | undefined;
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}, {
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dimensions?: {
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313
|
+
values: string[] | null;
|
314
|
+
type: "quantitative" | "nominal" | "ordinal" | "temporal";
|
315
|
+
field: string;
|
316
|
+
}[] | undefined;
|
317
|
+
isPyramid?: boolean | undefined;
|
318
|
+
transform?: {
|
319
|
+
scale: number;
|
320
|
+
translate: {
|
321
|
+
x: number;
|
322
|
+
y: number;
|
323
|
+
};
|
324
|
+
} | {
|
325
|
+
matrix: number[];
|
326
|
+
} | undefined;
|
327
|
+
isBitmask?: boolean | undefined;
|
328
|
+
omeTiffOffsetsUrl?: string | undefined;
|
329
|
+
}>>;
|
330
|
+
requestInit: z.ZodOptional<z.ZodObject<{
|
331
|
+
method: z.ZodOptional<z.ZodString>;
|
332
|
+
headers: z.ZodOptional<z.ZodRecord<z.ZodString, z.ZodAny>>;
|
333
|
+
body: z.ZodOptional<z.ZodString>;
|
334
|
+
mode: z.ZodOptional<z.ZodString>;
|
335
|
+
credentials: z.ZodOptional<z.ZodString>;
|
336
|
+
cache: z.ZodOptional<z.ZodString>;
|
337
|
+
redirect: z.ZodOptional<z.ZodString>;
|
338
|
+
referrer: z.ZodOptional<z.ZodString>;
|
339
|
+
integrity: z.ZodOptional<z.ZodString>;
|
340
|
+
}, "strip", z.ZodTypeAny, {
|
341
|
+
method?: string | undefined;
|
342
|
+
headers?: Record<string, any> | undefined;
|
343
|
+
body?: string | undefined;
|
344
|
+
mode?: string | undefined;
|
345
|
+
credentials?: string | undefined;
|
346
|
+
cache?: string | undefined;
|
347
|
+
redirect?: string | undefined;
|
348
|
+
referrer?: string | undefined;
|
349
|
+
integrity?: string | undefined;
|
350
|
+
}, {
|
351
|
+
method?: string | undefined;
|
352
|
+
headers?: Record<string, any> | undefined;
|
353
|
+
body?: string | undefined;
|
354
|
+
mode?: string | undefined;
|
355
|
+
credentials?: string | undefined;
|
356
|
+
cache?: string | undefined;
|
357
|
+
redirect?: string | undefined;
|
358
|
+
referrer?: string | undefined;
|
359
|
+
integrity?: string | undefined;
|
360
|
+
}>>;
|
361
|
+
}, "strip", z.ZodTypeAny, {
|
362
|
+
type: string;
|
363
|
+
name: string;
|
364
|
+
url: string;
|
365
|
+
metadata?: {
|
366
|
+
dimensions?: {
|
367
|
+
values: string[] | null;
|
368
|
+
type: "quantitative" | "nominal" | "ordinal" | "temporal";
|
369
|
+
field: string;
|
370
|
+
}[] | undefined;
|
371
|
+
isPyramid?: boolean | undefined;
|
372
|
+
transform?: {
|
373
|
+
scale: number;
|
374
|
+
translate: {
|
375
|
+
x: number;
|
376
|
+
y: number;
|
377
|
+
};
|
378
|
+
} | {
|
379
|
+
matrix: number[];
|
380
|
+
} | undefined;
|
381
|
+
isBitmask?: boolean | undefined;
|
382
|
+
omeTiffOffsetsUrl?: string | undefined;
|
383
|
+
} | undefined;
|
384
|
+
requestInit?: {
|
385
|
+
method?: string | undefined;
|
386
|
+
headers?: Record<string, any> | undefined;
|
387
|
+
body?: string | undefined;
|
388
|
+
mode?: string | undefined;
|
389
|
+
credentials?: string | undefined;
|
390
|
+
cache?: string | undefined;
|
391
|
+
redirect?: string | undefined;
|
392
|
+
referrer?: string | undefined;
|
393
|
+
integrity?: string | undefined;
|
394
|
+
} | undefined;
|
395
|
+
}, {
|
396
|
+
type: string;
|
397
|
+
name: string;
|
398
|
+
url: string;
|
399
|
+
metadata?: {
|
400
|
+
dimensions?: {
|
401
|
+
values: string[] | null;
|
402
|
+
type: "quantitative" | "nominal" | "ordinal" | "temporal";
|
403
|
+
field: string;
|
404
|
+
}[] | undefined;
|
405
|
+
isPyramid?: boolean | undefined;
|
406
|
+
transform?: {
|
407
|
+
scale: number;
|
408
|
+
translate: {
|
409
|
+
x: number;
|
410
|
+
y: number;
|
411
|
+
};
|
412
|
+
} | {
|
413
|
+
matrix: number[];
|
414
|
+
} | undefined;
|
415
|
+
isBitmask?: boolean | undefined;
|
416
|
+
omeTiffOffsetsUrl?: string | undefined;
|
417
|
+
} | undefined;
|
418
|
+
requestInit?: {
|
419
|
+
method?: string | undefined;
|
420
|
+
headers?: Record<string, any> | undefined;
|
421
|
+
body?: string | undefined;
|
422
|
+
mode?: string | undefined;
|
423
|
+
credentials?: string | undefined;
|
424
|
+
cache?: string | undefined;
|
425
|
+
redirect?: string | undefined;
|
426
|
+
referrer?: string | undefined;
|
427
|
+
integrity?: string | undefined;
|
428
|
+
} | undefined;
|
429
|
+
}>, "many">;
|
430
|
+
}, "strip", z.ZodTypeAny, {
|
431
|
+
schemaVersion: "0.0.2";
|
432
|
+
images: {
|
433
|
+
type: string;
|
434
|
+
name: string;
|
435
|
+
url: string;
|
436
|
+
metadata?: {
|
437
|
+
dimensions?: {
|
438
|
+
values: string[] | null;
|
439
|
+
type: "quantitative" | "nominal" | "ordinal" | "temporal";
|
440
|
+
field: string;
|
441
|
+
}[] | undefined;
|
442
|
+
isPyramid?: boolean | undefined;
|
443
|
+
transform?: {
|
444
|
+
scale: number;
|
445
|
+
translate: {
|
446
|
+
x: number;
|
447
|
+
y: number;
|
448
|
+
};
|
449
|
+
} | {
|
450
|
+
matrix: number[];
|
451
|
+
} | undefined;
|
452
|
+
isBitmask?: boolean | undefined;
|
453
|
+
omeTiffOffsetsUrl?: string | undefined;
|
454
|
+
} | undefined;
|
455
|
+
requestInit?: {
|
456
|
+
method?: string | undefined;
|
457
|
+
headers?: Record<string, any> | undefined;
|
458
|
+
body?: string | undefined;
|
459
|
+
mode?: string | undefined;
|
460
|
+
credentials?: string | undefined;
|
461
|
+
cache?: string | undefined;
|
462
|
+
redirect?: string | undefined;
|
463
|
+
referrer?: string | undefined;
|
464
|
+
integrity?: string | undefined;
|
465
|
+
} | undefined;
|
466
|
+
}[];
|
467
|
+
usePhysicalSizeScaling?: boolean | undefined;
|
468
|
+
renderLayers?: string[] | undefined;
|
469
|
+
}, {
|
470
|
+
schemaVersion: "0.0.2";
|
471
|
+
images: {
|
472
|
+
type: string;
|
473
|
+
name: string;
|
474
|
+
url: string;
|
475
|
+
metadata?: {
|
476
|
+
dimensions?: {
|
477
|
+
values: string[] | null;
|
478
|
+
type: "quantitative" | "nominal" | "ordinal" | "temporal";
|
479
|
+
field: string;
|
480
|
+
}[] | undefined;
|
481
|
+
isPyramid?: boolean | undefined;
|
482
|
+
transform?: {
|
483
|
+
scale: number;
|
484
|
+
translate: {
|
485
|
+
x: number;
|
486
|
+
y: number;
|
487
|
+
};
|
488
|
+
} | {
|
489
|
+
matrix: number[];
|
490
|
+
} | undefined;
|
491
|
+
isBitmask?: boolean | undefined;
|
492
|
+
omeTiffOffsetsUrl?: string | undefined;
|
493
|
+
} | undefined;
|
494
|
+
requestInit?: {
|
495
|
+
method?: string | undefined;
|
496
|
+
headers?: Record<string, any> | undefined;
|
497
|
+
body?: string | undefined;
|
498
|
+
mode?: string | undefined;
|
499
|
+
credentials?: string | undefined;
|
500
|
+
cache?: string | undefined;
|
501
|
+
redirect?: string | undefined;
|
502
|
+
referrer?: string | undefined;
|
503
|
+
integrity?: string | undefined;
|
504
|
+
} | undefined;
|
505
|
+
}[];
|
506
|
+
usePhysicalSizeScaling?: boolean | undefined;
|
507
|
+
renderLayers?: string[] | undefined;
|
508
|
+
}>> | PluginJointFileType<z.ZodOptional<z.ZodObject<{
|
509
|
+
obsLabelsTypes: z.ZodOptional<z.ZodArray<z.ZodString, "many">>;
|
510
|
+
embeddingTypes: z.ZodOptional<z.ZodArray<z.ZodString, "many">>;
|
511
|
+
}, "strip", z.ZodTypeAny, {
|
512
|
+
obsLabelsTypes?: string[] | undefined;
|
513
|
+
embeddingTypes?: string[] | undefined;
|
514
|
+
}, {
|
515
|
+
obsLabelsTypes?: string[] | undefined;
|
516
|
+
embeddingTypes?: string[] | undefined;
|
517
|
+
}>>>)[];
|
518
|
+
export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullable<z.ZodString>> | PluginCoordinationType<z.ZodString> | PluginCoordinationType<z.ZodNullable<z.ZodNumber>> | PluginCoordinationType<z.ZodBoolean> | PluginCoordinationType<z.ZodNumber> | PluginCoordinationType<z.ZodEnum<["manual", "auto"]>> | PluginCoordinationType<z.ZodNullable<z.ZodBoolean>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodObject<{
|
519
|
+
channels: z.ZodArray<z.ZodObject<{
|
520
|
+
color: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
|
521
|
+
selection: z.ZodRecord<z.ZodString, z.ZodAny>;
|
522
|
+
slider: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
|
523
|
+
visible: z.ZodOptional<z.ZodBoolean>;
|
524
|
+
}, "strict", z.ZodTypeAny, {
|
525
|
+
selection: Record<string, any>;
|
526
|
+
color?: number[] | undefined;
|
527
|
+
slider?: number[] | undefined;
|
528
|
+
visible?: boolean | undefined;
|
529
|
+
}, {
|
530
|
+
selection: Record<string, any>;
|
531
|
+
color?: number[] | undefined;
|
532
|
+
slider?: number[] | undefined;
|
533
|
+
visible?: boolean | undefined;
|
534
|
+
}>, "many">;
|
535
|
+
colormap: z.ZodNullable<z.ZodString>;
|
536
|
+
transparentColor: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodNumber, "many">>>;
|
537
|
+
index: z.ZodNumber;
|
538
|
+
opacity: z.ZodNumber;
|
539
|
+
modelMatrix: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
|
540
|
+
domainType: z.ZodOptional<z.ZodEnum<["Full", "Min/Max"]>>;
|
541
|
+
resolution: z.ZodOptional<z.ZodNumber>;
|
542
|
+
xSlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
|
543
|
+
renderingMode: z.ZodOptional<z.ZodString>;
|
544
|
+
ySlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
|
545
|
+
zSlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
|
546
|
+
type: z.ZodOptional<z.ZodEnum<["raster", "bitmask"]>>;
|
547
|
+
use3d: z.ZodOptional<z.ZodBoolean>;
|
548
|
+
visible: z.ZodOptional<z.ZodBoolean>;
|
549
|
+
}, "strict", z.ZodTypeAny, {
|
550
|
+
channels: {
|
551
|
+
selection: Record<string, any>;
|
552
|
+
color?: number[] | undefined;
|
553
|
+
slider?: number[] | undefined;
|
554
|
+
visible?: boolean | undefined;
|
555
|
+
}[];
|
556
|
+
colormap: string | null;
|
557
|
+
index: number;
|
558
|
+
opacity: number;
|
559
|
+
transparentColor?: number[] | null | undefined;
|
560
|
+
modelMatrix?: number[] | undefined;
|
561
|
+
domainType?: "Full" | "Min/Max" | undefined;
|
562
|
+
resolution?: number | undefined;
|
563
|
+
xSlice?: any[] | null | undefined;
|
564
|
+
renderingMode?: string | undefined;
|
565
|
+
ySlice?: any[] | null | undefined;
|
566
|
+
zSlice?: any[] | null | undefined;
|
567
|
+
type?: "raster" | "bitmask" | undefined;
|
568
|
+
use3d?: boolean | undefined;
|
569
|
+
visible?: boolean | undefined;
|
570
|
+
}, {
|
571
|
+
channels: {
|
572
|
+
selection: Record<string, any>;
|
573
|
+
color?: number[] | undefined;
|
574
|
+
slider?: number[] | undefined;
|
575
|
+
visible?: boolean | undefined;
|
576
|
+
}[];
|
577
|
+
colormap: string | null;
|
578
|
+
index: number;
|
579
|
+
opacity: number;
|
580
|
+
transparentColor?: number[] | null | undefined;
|
581
|
+
modelMatrix?: number[] | undefined;
|
582
|
+
domainType?: "Full" | "Min/Max" | undefined;
|
583
|
+
resolution?: number | undefined;
|
584
|
+
xSlice?: any[] | null | undefined;
|
585
|
+
renderingMode?: string | undefined;
|
586
|
+
ySlice?: any[] | null | undefined;
|
587
|
+
zSlice?: any[] | null | undefined;
|
588
|
+
type?: "raster" | "bitmask" | undefined;
|
589
|
+
use3d?: boolean | undefined;
|
590
|
+
visible?: boolean | undefined;
|
591
|
+
}>, "many">>> | PluginCoordinationType<z.ZodNullable<z.ZodUnion<[z.ZodObject<{
|
592
|
+
visible: z.ZodBoolean;
|
593
|
+
stroked: z.ZodBoolean;
|
594
|
+
radius: z.ZodNumber;
|
595
|
+
opacity: z.ZodNumber;
|
596
|
+
}, "strip", z.ZodTypeAny, {
|
597
|
+
visible: boolean;
|
598
|
+
opacity: number;
|
599
|
+
stroked: boolean;
|
600
|
+
radius: number;
|
601
|
+
}, {
|
602
|
+
visible: boolean;
|
603
|
+
opacity: number;
|
604
|
+
stroked: boolean;
|
605
|
+
radius: number;
|
606
|
+
}>, z.ZodArray<z.ZodObject<{
|
607
|
+
channels: z.ZodArray<z.ZodObject<{
|
608
|
+
color: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
|
609
|
+
selection: z.ZodRecord<z.ZodString, z.ZodAny>;
|
610
|
+
slider: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
|
611
|
+
visible: z.ZodOptional<z.ZodBoolean>;
|
612
|
+
}, "strict", z.ZodTypeAny, {
|
613
|
+
selection: Record<string, any>;
|
614
|
+
color?: number[] | undefined;
|
615
|
+
slider?: number[] | undefined;
|
616
|
+
visible?: boolean | undefined;
|
617
|
+
}, {
|
618
|
+
selection: Record<string, any>;
|
619
|
+
color?: number[] | undefined;
|
620
|
+
slider?: number[] | undefined;
|
621
|
+
visible?: boolean | undefined;
|
622
|
+
}>, "many">;
|
623
|
+
colormap: z.ZodNullable<z.ZodString>;
|
624
|
+
transparentColor: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodNumber, "many">>>;
|
625
|
+
index: z.ZodNumber;
|
626
|
+
opacity: z.ZodNumber;
|
627
|
+
modelMatrix: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
|
628
|
+
domainType: z.ZodOptional<z.ZodEnum<["Full", "Min/Max"]>>;
|
629
|
+
resolution: z.ZodOptional<z.ZodNumber>;
|
630
|
+
xSlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
|
631
|
+
renderingMode: z.ZodOptional<z.ZodString>;
|
632
|
+
ySlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
|
633
|
+
zSlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
|
634
|
+
type: z.ZodOptional<z.ZodEnum<["raster", "bitmask"]>>;
|
635
|
+
use3d: z.ZodOptional<z.ZodBoolean>;
|
636
|
+
visible: z.ZodOptional<z.ZodBoolean>;
|
637
|
+
}, "strict", z.ZodTypeAny, {
|
638
|
+
channels: {
|
639
|
+
selection: Record<string, any>;
|
640
|
+
color?: number[] | undefined;
|
641
|
+
slider?: number[] | undefined;
|
642
|
+
visible?: boolean | undefined;
|
643
|
+
}[];
|
644
|
+
colormap: string | null;
|
645
|
+
index: number;
|
646
|
+
opacity: number;
|
647
|
+
transparentColor?: number[] | null | undefined;
|
648
|
+
modelMatrix?: number[] | undefined;
|
649
|
+
domainType?: "Full" | "Min/Max" | undefined;
|
650
|
+
resolution?: number | undefined;
|
651
|
+
xSlice?: any[] | null | undefined;
|
652
|
+
renderingMode?: string | undefined;
|
653
|
+
ySlice?: any[] | null | undefined;
|
654
|
+
zSlice?: any[] | null | undefined;
|
655
|
+
type?: "raster" | "bitmask" | undefined;
|
656
|
+
use3d?: boolean | undefined;
|
657
|
+
visible?: boolean | undefined;
|
658
|
+
}, {
|
659
|
+
channels: {
|
660
|
+
selection: Record<string, any>;
|
661
|
+
color?: number[] | undefined;
|
662
|
+
slider?: number[] | undefined;
|
663
|
+
visible?: boolean | undefined;
|
664
|
+
}[];
|
665
|
+
colormap: string | null;
|
666
|
+
index: number;
|
667
|
+
opacity: number;
|
668
|
+
transparentColor?: number[] | null | undefined;
|
669
|
+
modelMatrix?: number[] | undefined;
|
670
|
+
domainType?: "Full" | "Min/Max" | undefined;
|
671
|
+
resolution?: number | undefined;
|
672
|
+
xSlice?: any[] | null | undefined;
|
673
|
+
renderingMode?: string | undefined;
|
674
|
+
ySlice?: any[] | null | undefined;
|
675
|
+
zSlice?: any[] | null | undefined;
|
676
|
+
type?: "raster" | "bitmask" | undefined;
|
677
|
+
use3d?: boolean | undefined;
|
678
|
+
visible?: boolean | undefined;
|
679
|
+
}>, "many">]>>> | PluginCoordinationType<z.ZodNullable<z.ZodObject<{
|
680
|
+
visible: z.ZodBoolean;
|
681
|
+
}, "strip", z.ZodTypeAny, {
|
682
|
+
visible: boolean;
|
683
|
+
}, {
|
684
|
+
visible: boolean;
|
685
|
+
}>>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodString, "many">>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodArray<z.ZodString, "many">, "many">>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodObject<{
|
686
|
+
path: z.ZodArray<z.ZodString, "many">;
|
687
|
+
color: z.ZodArray<z.ZodNumber, "many">;
|
688
|
+
}, "strip", z.ZodTypeAny, {
|
689
|
+
path: string[];
|
690
|
+
color: number[];
|
691
|
+
}, {
|
692
|
+
path: string[];
|
693
|
+
color: number[];
|
694
|
+
}>, "many">>> | PluginCoordinationType<z.ZodEnum<["geneSelection", "cellSetSelection"]>> | PluginCoordinationType<z.ZodNullable<z.ZodEnum<["log1p", "arcsinh"]>>> | PluginCoordinationType<z.ZodArray<z.ZodNumber, "many">> | PluginCoordinationType<z.ZodNullable<z.ZodEffects<z.ZodUnion<[z.ZodObject<{
|
695
|
+
version: z.ZodLiteral<"0.1.3">;
|
696
|
+
tree: z.ZodArray<z.ZodType<{
|
697
|
+
name: string;
|
698
|
+
color?: number[] | undefined;
|
699
|
+
} & {
|
700
|
+
children: (({
|
701
|
+
name: string;
|
702
|
+
color?: number[] | undefined;
|
703
|
+
} & any) | {
|
704
|
+
set: [string, number | null][];
|
705
|
+
name: string;
|
706
|
+
color?: number[] | undefined;
|
707
|
+
})[];
|
708
|
+
}, z.ZodTypeDef, {
|
709
|
+
name: string;
|
710
|
+
color?: number[] | undefined;
|
711
|
+
} & {
|
712
|
+
children: (({
|
713
|
+
name: string;
|
714
|
+
color?: number[] | undefined;
|
715
|
+
} & any) | {
|
716
|
+
set: [string, number | null][];
|
717
|
+
name: string;
|
718
|
+
color?: number[] | undefined;
|
719
|
+
})[];
|
720
|
+
}>, "many">;
|
721
|
+
}, "strip", z.ZodTypeAny, {
|
722
|
+
version: "0.1.3";
|
723
|
+
tree: ({
|
724
|
+
name: string;
|
725
|
+
color?: number[] | undefined;
|
726
|
+
} & {
|
727
|
+
children: (({
|
728
|
+
name: string;
|
729
|
+
color?: number[] | undefined;
|
730
|
+
} & any) | {
|
731
|
+
set: [string, number | null][];
|
732
|
+
name: string;
|
733
|
+
color?: number[] | undefined;
|
734
|
+
})[];
|
735
|
+
})[];
|
736
|
+
}, {
|
737
|
+
version: "0.1.3";
|
738
|
+
tree: ({
|
739
|
+
name: string;
|
740
|
+
color?: number[] | undefined;
|
741
|
+
} & {
|
742
|
+
children: (({
|
743
|
+
name: string;
|
744
|
+
color?: number[] | undefined;
|
745
|
+
} & any) | {
|
746
|
+
set: [string, number | null][];
|
747
|
+
name: string;
|
748
|
+
color?: number[] | undefined;
|
749
|
+
})[];
|
750
|
+
})[];
|
751
|
+
}>, z.ZodObject<{
|
752
|
+
version: z.ZodLiteral<"0.1.2">;
|
753
|
+
tree: z.ZodArray<z.ZodType<{
|
754
|
+
name: string;
|
755
|
+
color?: number[] | undefined;
|
756
|
+
} & {
|
757
|
+
children: (({
|
758
|
+
name: string;
|
759
|
+
color?: number[] | undefined;
|
760
|
+
} & any) | {
|
761
|
+
set: string[];
|
762
|
+
name: string;
|
763
|
+
color?: number[] | undefined;
|
764
|
+
})[];
|
765
|
+
}, z.ZodTypeDef, {
|
766
|
+
name: string;
|
767
|
+
color?: number[] | undefined;
|
768
|
+
} & {
|
769
|
+
children: (({
|
770
|
+
name: string;
|
771
|
+
color?: number[] | undefined;
|
772
|
+
} & any) | {
|
773
|
+
set: string[];
|
774
|
+
name: string;
|
775
|
+
color?: number[] | undefined;
|
776
|
+
})[];
|
777
|
+
}>, "many">;
|
778
|
+
}, "strip", z.ZodTypeAny, {
|
779
|
+
version: "0.1.2";
|
780
|
+
tree: ({
|
781
|
+
name: string;
|
782
|
+
color?: number[] | undefined;
|
783
|
+
} & {
|
784
|
+
children: (({
|
785
|
+
name: string;
|
786
|
+
color?: number[] | undefined;
|
787
|
+
} & any) | {
|
788
|
+
set: string[];
|
789
|
+
name: string;
|
790
|
+
color?: number[] | undefined;
|
791
|
+
})[];
|
792
|
+
})[];
|
793
|
+
}, {
|
794
|
+
version: "0.1.2";
|
795
|
+
tree: ({
|
796
|
+
name: string;
|
797
|
+
color?: number[] | undefined;
|
798
|
+
} & {
|
799
|
+
children: (({
|
800
|
+
name: string;
|
801
|
+
color?: number[] | undefined;
|
802
|
+
} & any) | {
|
803
|
+
set: string[];
|
804
|
+
name: string;
|
805
|
+
color?: number[] | undefined;
|
806
|
+
})[];
|
807
|
+
})[];
|
808
|
+
}>]>, {
|
809
|
+
version: "0.1.3";
|
810
|
+
tree: ({
|
811
|
+
name: string;
|
812
|
+
color?: number[] | undefined;
|
813
|
+
} & {
|
814
|
+
children: (({
|
815
|
+
name: string;
|
816
|
+
color?: number[] | undefined;
|
817
|
+
} & any) | {
|
818
|
+
set: [string, number | null][];
|
819
|
+
name: string;
|
820
|
+
color?: number[] | undefined;
|
821
|
+
})[];
|
822
|
+
})[];
|
823
|
+
}, {
|
824
|
+
version: "0.1.2";
|
825
|
+
tree: ({
|
826
|
+
name: string;
|
827
|
+
color?: number[] | undefined;
|
828
|
+
} & {
|
829
|
+
children: (({
|
830
|
+
name: string;
|
831
|
+
color?: number[] | undefined;
|
832
|
+
} & any) | {
|
833
|
+
set: string[];
|
834
|
+
name: string;
|
835
|
+
color?: number[] | undefined;
|
836
|
+
})[];
|
837
|
+
})[];
|
838
|
+
} | {
|
839
|
+
version: "0.1.3";
|
840
|
+
tree: ({
|
841
|
+
name: string;
|
842
|
+
color?: number[] | undefined;
|
843
|
+
} & {
|
844
|
+
children: (({
|
845
|
+
name: string;
|
846
|
+
color?: number[] | undefined;
|
847
|
+
} & any) | {
|
848
|
+
set: [string, number | null][];
|
849
|
+
name: string;
|
850
|
+
color?: number[] | undefined;
|
851
|
+
})[];
|
852
|
+
})[];
|
853
|
+
}>>>)[];
|
854
|
+
//# sourceMappingURL=base-plugins.d.ts.map
|