@triedotdev/mcp 1.0.149 → 1.0.154

package/dist/chunk-HD5H7YSW.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/memory/ledger.ts","../src/agent/git.ts","../src/utils/command-runner.ts","../src/utils/audit-logger.ts","../src/memory/crypto-keys.ts","../src/memory/git-integration.ts"],"sourcesContent":["import { createHash } from 'crypto';\nimport { mkdir, readFile, writeFile, stat, unlink } from 'fs/promises';\nimport { existsSync } from 'fs';\nimport { createGzip, createGunzip } from 'zlib';\nimport { pipeline } from 'stream/promises';\nimport { createReadStream, createWriteStream } from 'fs';\nimport { join } from 'path';\nimport { atomicWriteJSON } from '../utils/atomic-write.js';\nimport { getWorkingDirectory, getTrieDirectory } from '../utils/workspace.js';\nimport { getLastCommit, isGitRepo } from '../agent/git.js';\nimport type { StoredIssue } from './issue-store.js';\nimport { signHash, verifyHashSignature, hasSigningKey, type SignatureData } from './crypto-keys.js';\nimport { autoCommitLedger, ensureKeysIgnored } from './git-integration.js';\n\nconst LEDGER_FILENAME = 'ledger.json';\nconst SHARED_LEDGER_DIR = '.trie-shared';\nconst MANIFEST_FILENAME = 'ledger-manifest.json';\nconst SYNC_STATE_FILENAME = 'ledger-sync.json';\nconst GENESIS_HASH = '0'.repeat(64);\nconst LEDGER_VERSION = 2; // Increased for sync support\n\nexport interface LedgerEntry {\n  id: string;\n  hash: string;\n  severity: string;\n  file: string;\n  agent: string;\n  timestamp: string;\n  status?: 'active' | 'corrected' | 'false-positive';\n  correctedBy?: string; // Entry ID that corrects this\n  correction?: string; // Reason for correction\n  correctionTimestamp?: string; // When the correction was made\n  // Digital signature fields\n  signature?: string;      // Ed25519 signature of entry hash\n  publicKey?: string;      // Public key that signed this\n  signedAt?: string;       // When the entry was signed\n  signatureAlgorithm?: 'Ed25519';\n}\n\nexport interface LedgerBlock {\n  version: number;\n  date: string;\n  entries: LedgerEntry[];\n  previousHash: string;\n  merkleRoot: string;\n  blockHash: string;\n  createdAt: string;\n  updatedAt: string;\n}\n\nexport interface LedgerVerificationResult {\n  valid: boolean;\n  error?: string;\n}\n\n// Enhanced interfaces for sync functionality\nexport interface SyncableLedgerBlock extends LedgerBlock {\n  author: string;          // Developer who created block\n  gitCommit?: string;      // Associated git commit hash\n  chainHeight: number;     // Block position in chain\n  syncedAt?: string;       // When block was synced\n  conflictResolved?: boolean; // If block resolved conflicts\n}\n\nexport interface CompressedBlock {\n  date: string;\n  compressedData: string;     // gzipped JSON\n  originalSize: number;\n  compressedSize: number;\n  compressionRatio: number;\n  entryCount: number;\n  blockHash: string;\n  author: string;\n}\n\nexport interface LedgerManifest {\n  version: number;\n  created: string;\n  lastSync: string;\n  totalBlocks: number;\n  totalEntries: number;\n  activeBlocks: string[];      // Recent block filenames\n  archivedBlocks: string[];    // Archived block filenames\n  index: {\n    byDate: Record<string, string>;      // date → block location\n    byAuthor: Record<string, string[]>;  // author → block locations\n    bySeverity: Record<string, number>;  // severity → count\n  };\n  compressionConfig: {\n    enabled: boolean;\n    archiveAfterDays: number;\n    compressionLevel: number;\n    maxHotStorageSize: number; // bytes\n  };\n}\n\nexport interface LedgerSyncState {\n  lastSyncTimestamp: string;\n  lastSyncCommit?: string;\n  conflicts: ChainConflict[];\n  localChanges: boolean;\n  sharedChanges: boolean;\n}\n\nexport interface ChainConflict {\n  type: 'divergent_chain' | 'duplicate_entry' | 'hash_mismatch';\n  description: string;\n  localBlock?: SyncableLedgerBlock;\n  remoteBlock?: SyncableLedgerBlock;\n  resolution?: 'local' | 'remote' | 'merge' | 'manual';\n}\n\nexport interface ChainMergeResult {\n  mergedChain: SyncableLedgerBlock[];\n  conflicts: ChainConflict[];\n  resolutionStrategy: 'longest' | 'timestamp' | 'manual';\n  stats: {\n    localBlocks: number;\n    remoteBlocks: number;\n    mergedBlocks: number;\n    duplicatesRemoved: number;\n  };\n}\n\n/**\n * Sign a ledger entry with Ed25519\n * \n * Signs the entry hash to prove authenticity and detect tampering.\n * Creates or uses existing signing key from .trie/keys/\n */\nexport async function signLedgerEntry(entry: LedgerEntry, workDir?: string): Promise<LedgerEntry> {\n  try {\n    const signatureData = await signHash(entry.hash, workDir);\n    \n    return {\n      ...entry,\n      signature: signatureData.signature,\n      publicKey: signatureData.publicKey,\n      signedAt: signatureData.signedAt,\n      signatureAlgorithm: 'Ed25519'\n    };\n  } catch (error) {\n    console.error('Failed to sign ledger entry:', error);\n    // Return unsigned entry if signing fails\n    return entry;\n  }\n}\n\n/**\n * Verify a ledger entry signature\n * \n * Returns true if signature is valid, false otherwise.\n * Unsigned entries return true (for backward compatibility).\n */\nexport async function verifyLedgerEntry(entry: LedgerEntry): Promise<boolean> {\n  // Unsigned entries are considered valid (backward compatibility)\n  if (!entry.signature || !entry.publicKey) {\n    return true;\n  }\n  \n  // Check algorithm\n  if (entry.signatureAlgorithm !== 'Ed25519') {\n    console.error('Unsupported signature algorithm:', entry.signatureAlgorithm);\n    return false;\n  }\n  \n  const signatureData: SignatureData = {\n    signature: entry.signature,\n    publicKey: entry.publicKey,\n    algorithm: 'Ed25519',\n    signedAt: entry.signedAt || ''\n  };\n  \n  return await verifyHashSignature(entry.hash, signatureData);\n}\n\n/**\n * Verify all entries in a block\n */\nexport async function verifyBlockSignatures(block: LedgerBlock): Promise<{ valid: boolean; invalidEntries: string[] }> {\n  const invalidEntries: string[] = [];\n  \n  for (const entry of block.entries) {\n    const isValid = await verifyLedgerEntry(entry);\n    if (!isValid) {\n      invalidEntries.push(entry.id);\n    }\n  }\n  \n  return {\n    valid: invalidEntries.length === 0,\n    invalidEntries\n  };\n}\n\nexport async function appendIssuesToLedger(\n  issues: StoredIssue[],\n  workDir?: string,\n  author?: string\n): Promise<SyncableLedgerBlock | null> {\n  if (issues.length === 0) return null;\n\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  const memoryDir = join(getTrieDirectory(projectDir), 'memory');\n  await mkdir(memoryDir, { recursive: true });\n\n  // Get git info for author attribution\n  const isRepo = await isGitRepo(projectDir);\n  const lastCommit = isRepo ? await getLastCommit(projectDir) : null;\n  const blockAuthor = author || lastCommit?.author || 'unknown';\n\n  const blocks = await loadLedger(projectDir) as SyncableLedgerBlock[];\n  const today = new Date().toISOString().slice(0, 10);\n  const now = new Date().toISOString();\n\n  // Create entries and sign them if signing key exists\n  const shouldSign = hasSigningKey(projectDir);\n  let entries: LedgerEntry[] = issues.map(issue => ({\n    id: issue.id,\n    hash: issue.hash,\n    severity: issue.severity,\n    file: issue.file,\n    agent: issue.agent,\n    timestamp: issue.timestamp,\n    status: 'active' as const,\n  }));\n  \n  // Sign all entries if key exists\n  if (shouldSign) {\n    entries = await Promise.all(entries.map(entry => signLedgerEntry(entry, projectDir)));\n  }\n\n  const previousBlock = blocks[blocks.length - 1];\n  const block = previousBlock && previousBlock.date === today\n    ? previousBlock\n    : createSyncableBlock(today, now, previousBlock?.blockHash ?? GENESIS_HASH, blockAuthor, lastCommit?.hash, blocks.length);\n\n  if (block !== previousBlock) {\n    blocks.push(block);\n  }\n\n  block.entries = [...block.entries, ...entries];\n  block.merkleRoot = computeMerkleRoot(block.entries.map(entry => entry.hash));\n  block.blockHash = computeBlockHash(block.previousHash, block.merkleRoot, block.date, block.version);\n  block.updatedAt = now;\n\n  await saveLedger(blocks, projectDir);\n  \n  // Level 2: Auto-commit to git (if enabled)\n  if (await isGitRepo(projectDir)) {\n    // Ensure signing keys are in .gitignore\n    await ensureKeysIgnored(projectDir);\n    \n    // Auto-commit ledger changes\n    const commitMessage = `ledger: append ${entries.length} ${entries.length === 1 ? 'entry' : 'entries'}`;\n    await autoCommitLedger(projectDir, commitMessage);\n  }\n  \n  return block;\n}\n\nexport async function verifyLedger(workDir?: string): Promise<LedgerVerificationResult> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  const blocks = await loadLedger(projectDir);\n\n  if (blocks.length === 0) {\n    return { valid: true };\n  }\n\n  for (let i = 0; i < blocks.length; i += 1) {\n    const block = blocks[i];\n    if (!block) {\n      return { valid: false, error: `Block ${i} missing` };\n    }\n    const expectedPreviousHash = i === 0\n      ? GENESIS_HASH\n      : blocks[i - 1]?.blockHash;\n\n    if (!expectedPreviousHash) {\n      return { valid: false, error: `Block ${i} missing previous block` };\n    }\n\n    if (block.previousHash !== expectedPreviousHash) {\n      return { valid: false, error: `Block ${i} previous hash mismatch` };\n    }\n\n    const computedMerkleRoot = computeMerkleRoot(block.entries.map(entry => entry.hash));\n    if (block.merkleRoot !== computedMerkleRoot) {\n      return { valid: false, error: `Block ${i} merkle root mismatch` };\n    }\n\n    const computedBlockHash = computeBlockHash(block.previousHash, block.merkleRoot, block.date, block.version);\n    if (block.blockHash !== computedBlockHash) {\n      return { valid: false, error: `Block ${i} block hash mismatch` };\n    }\n    \n    // Verify signatures for signed entries\n    const signatureVerification = await verifyBlockSignatures(block);\n    if (!signatureVerification.valid) {\n      return { \n        valid: false, \n        error: `Block ${i} has invalid signatures: ${signatureVerification.invalidEntries.join(', ')}` \n      };\n    }\n  }\n\n  return { valid: true };\n}\n\nexport function computeMerkleRoot(hashes: string[]): string {\n  if (hashes.length === 0) {\n    return sha256('');\n  }\n\n  let level = hashes.slice();\n  while (level.length > 1) {\n    const nextLevel: string[] = [];\n    for (let i = 0; i < level.length; i += 2) {\n      const left = level[i];\n      const right = level[i + 1] ?? left;\n      nextLevel.push(sha256(`${left}:${right}`));\n    }\n    level = nextLevel;\n  }\n\n  return level[0]!;\n}\n\nfunction computeBlockHash(previousHash: string, merkleRoot: string, date: string, version: number): string {\n  return sha256(`${version}:${date}:${previousHash}:${merkleRoot}`);\n}\n\nfunction createSyncableBlock(\n  date: string,\n  now: string,\n  previousHash: string,\n  author: string,\n  gitCommit?: string,\n  chainHeight: number = 0\n): SyncableLedgerBlock {\n  return {\n    version: LEDGER_VERSION,\n    date,\n    entries: [],\n    previousHash,\n    merkleRoot: '',\n    blockHash: '',\n    createdAt: now,\n    updatedAt: now,\n    author,\n    chainHeight,\n    ...(gitCommit && { gitCommit }),\n  };\n}\n\nasync function loadLedger(projectDir: string): Promise<LedgerBlock[]> {\n  const ledgerPath = join(getTrieDirectory(projectDir), 'memory', LEDGER_FILENAME);\n  try {\n    if (!existsSync(ledgerPath)) return [];\n    const content = await readFile(ledgerPath, 'utf-8');\n    const parsed = JSON.parse(content);\n    if (!Array.isArray(parsed)) return [];\n    return parsed as LedgerBlock[];\n  } catch {\n    return [];\n  }\n}\n\n/** Load ledger blocks for UI display (block hashes, merkle roots, chain) */\nexport async function getLedgerBlocks(workDir?: string): Promise<LedgerBlock[]> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  return loadLedger(projectDir);\n}\n\nasync function saveLedger(blocks: LedgerBlock[], projectDir: string): Promise<void> {\n  const ledgerPath = join(getTrieDirectory(projectDir), 'memory', LEDGER_FILENAME);\n  await atomicWriteJSON(ledgerPath, blocks);\n}\n\nfunction sha256(input: string): string {\n  return createHash('sha256').update(input).digest('hex');\n}\n\n// ==================== Shared Storage Functions ====================\n\nfunction getSharedLedgerDir(projectDir: string): string {\n  return join(projectDir, SHARED_LEDGER_DIR);\n}\n\nfunction getActiveBlocksDir(projectDir: string): string {\n  return join(getSharedLedgerDir(projectDir), 'active');\n}\n\nfunction getArchivedBlocksDir(projectDir: string): string {\n  return join(getSharedLedgerDir(projectDir), 'archived');\n}\n\nfunction getManifestPath(projectDir: string): string {\n  return join(getSharedLedgerDir(projectDir), MANIFEST_FILENAME);\n}\n\nfunction getSyncStatePath(projectDir: string): string {\n  return join(getTrieDirectory(projectDir), 'memory', SYNC_STATE_FILENAME);\n}\n\nasync function ensureSharedStorageStructure(projectDir: string): Promise<void> {\n  const sharedDir = getSharedLedgerDir(projectDir);\n  const activeDir = getActiveBlocksDir(projectDir);\n  const archivedDir = getArchivedBlocksDir(projectDir);\n\n  await mkdir(sharedDir, { recursive: true });\n  await mkdir(activeDir, { recursive: true });\n  await mkdir(archivedDir, { recursive: true });\n}\n\nasync function loadManifest(projectDir: string): Promise<LedgerManifest | null> {\n  const manifestPath = getManifestPath(projectDir);\n\n  try {\n    if (!existsSync(manifestPath)) return null;\n    const content = await readFile(manifestPath, 'utf-8');\n    return JSON.parse(content) as LedgerManifest;\n  } catch {\n    return null;\n  }\n}\n\nasync function saveManifest(manifest: LedgerManifest, projectDir: string): Promise<void> {\n  const manifestPath = getManifestPath(projectDir);\n  await atomicWriteJSON(manifestPath, manifest);\n}\n\nasync function createDefaultManifest(_projectDir: string): Promise<LedgerManifest> {\n  const now = new Date().toISOString();\n\n  return {\n    version: LEDGER_VERSION,\n    created: now,\n    lastSync: now,\n    totalBlocks: 0,\n    totalEntries: 0,\n    activeBlocks: [],\n    archivedBlocks: [],\n    index: {\n      byDate: {},\n      byAuthor: {},\n      bySeverity: {}\n    },\n    compressionConfig: {\n      enabled: true,\n      archiveAfterDays: 30,\n      compressionLevel: 6,\n      maxHotStorageSize: 50 * 1024 * 1024 // 50MB\n    }\n  };\n}\n\nasync function loadSyncState(projectDir: string): Promise<LedgerSyncState | null> {\n  const syncStatePath = getSyncStatePath(projectDir);\n\n  try {\n    if (!existsSync(syncStatePath)) return null;\n    const content = await readFile(syncStatePath, 'utf-8');\n    return JSON.parse(content) as LedgerSyncState;\n  } catch {\n    return null;\n  }\n}\n\nasync function saveSyncState(syncState: LedgerSyncState, projectDir: string): Promise<void> {\n  const syncStatePath = getSyncStatePath(projectDir);\n  const memoryDir = join(getTrieDirectory(projectDir), 'memory');\n  await mkdir(memoryDir, { recursive: true });\n  await atomicWriteJSON(syncStatePath, syncState);\n}\n\n// ==================== Core Sync Functions ====================\n\nexport async function initializeSharedLedger(workDir?: string): Promise<void> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  await ensureSharedStorageStructure(projectDir);\n\n  const existingManifest = await loadManifest(projectDir);\n  if (!existingManifest) {\n    const manifest = await createDefaultManifest(projectDir);\n    await saveManifest(manifest, projectDir);\n  }\n\n  // Initialize sync state if needed\n  const existingSyncState = await loadSyncState(projectDir);\n  if (!existingSyncState) {\n    const now = new Date().toISOString();\n    const syncState: LedgerSyncState = {\n      lastSyncTimestamp: now,\n      conflicts: [],\n      localChanges: false,\n      sharedChanges: false\n    };\n    await saveSyncState(syncState, projectDir);\n  }\n}\n\nexport async function syncLedgerFromShared(workDir?: string): Promise<ChainMergeResult> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n\n  // Ensure shared storage exists\n  await initializeSharedLedger(projectDir);\n\n  // Load current state\n  const manifest = await loadManifest(projectDir);\n  const localBlocks = await loadLedger(projectDir) as SyncableLedgerBlock[];\n  const sharedBlocks = await loadSharedBlocks(projectDir);\n\n  if (!manifest) {\n    throw new Error('Failed to load ledger manifest');\n  }\n\n  // Merge chains\n  const mergeResult = await mergeChains(localBlocks, sharedBlocks, 'timestamp');\n\n  // Save merged chain locally\n  await saveLedger(mergeResult.mergedChain, projectDir);\n\n  // Update sync state\n  const syncState: LedgerSyncState = {\n    lastSyncTimestamp: new Date().toISOString(),\n    conflicts: mergeResult.conflicts,\n    localChanges: false,\n    sharedChanges: false\n  };\n  await saveSyncState(syncState, projectDir);\n\n  return mergeResult;\n}\n\nexport async function pushLedgerToShared(workDir?: string): Promise<void> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n\n  // Ensure shared storage exists\n  await initializeSharedLedger(projectDir);\n\n  // Load current state\n  const localBlocks = await loadLedger(projectDir) as SyncableLedgerBlock[];\n  const manifest = await loadManifest(projectDir) || await createDefaultManifest(projectDir);\n\n  // Save blocks to shared storage\n  const activeDir = getActiveBlocksDir(projectDir);\n\n  for (const block of localBlocks) {\n    const blockFilename = `${block.date}.json`;\n    const blockPath = join(activeDir, blockFilename);\n\n    // Only save if not already present or if block has been updated\n    if (!existsSync(blockPath) || block.updatedAt > manifest.lastSync) {\n      await atomicWriteJSON(blockPath, block);\n\n      // Update manifest index\n      manifest.index.byDate[block.date] = `active/${blockFilename}`;\n\n      const blockAuthor = block.author;\n      if (blockAuthor) {\n        if (!manifest.index.byAuthor[blockAuthor]) {\n          manifest.index.byAuthor[blockAuthor] = [];\n        }\n        if (!manifest.index.byAuthor[blockAuthor].includes(`active/${blockFilename}`)) {\n          manifest.index.byAuthor[blockAuthor].push(`active/${blockFilename}`);\n        }\n      }\n\n      // Update active blocks list\n      if (!manifest.activeBlocks.includes(blockFilename)) {\n        manifest.activeBlocks.push(blockFilename);\n      }\n    }\n  }\n\n  // Update manifest metadata\n  manifest.lastSync = new Date().toISOString();\n  manifest.totalBlocks = manifest.activeBlocks.length + manifest.archivedBlocks.length;\n  manifest.totalEntries = localBlocks.reduce((sum, block) => sum + block.entries.length, 0);\n\n  await saveManifest(manifest, projectDir);\n}\n\nasync function loadSharedBlocks(projectDir: string): Promise<SyncableLedgerBlock[]> {\n  const manifest = await loadManifest(projectDir);\n  if (!manifest) return [];\n\n  const blocks: SyncableLedgerBlock[] = [];\n  const activeDir = getActiveBlocksDir(projectDir);\n\n  // Load active blocks\n  for (const filename of manifest.activeBlocks) {\n    const blockPath = join(activeDir, filename);\n    try {\n      if (existsSync(blockPath)) {\n        const content = await readFile(blockPath, 'utf-8');\n        const block = JSON.parse(content) as SyncableLedgerBlock;\n        blocks.push(block);\n      }\n    } catch (error) {\n      console.warn(`Failed to load shared block ${filename}:`, error);\n    }\n  }\n\n  // TODO: Load archived blocks when needed\n\n  // Sort by date to maintain chronological order\n  return blocks.sort((a, b) => a.date.localeCompare(b.date));\n}\n\n// ==================== Chain Merge & Conflict Resolution ====================\n\nasync function mergeChains(\n  localBlocks: SyncableLedgerBlock[],\n  remoteBlocks: SyncableLedgerBlock[],\n  strategy: 'longest' | 'timestamp' | 'manual' = 'timestamp'\n): Promise<ChainMergeResult> {\n  const conflicts: ChainConflict[] = [];\n  const mergedBlocks = new Map<string, SyncableLedgerBlock>();\n  const stats = {\n    localBlocks: localBlocks.length,\n    remoteBlocks: remoteBlocks.length,\n    mergedBlocks: 0,\n    duplicatesRemoved: 0\n  };\n\n  // Index blocks by date for quick lookup\n  const localByDate = new Map<string, SyncableLedgerBlock>();\n  for (const block of localBlocks) {\n    localByDate.set(block.date, block);\n  }\n\n  const remoteByDate = new Map<string, SyncableLedgerBlock>();\n  for (const block of remoteBlocks) {\n    remoteByDate.set(block.date, block);\n  }\n\n  // Get all unique dates\n  const allDates = new Set([...localByDate.keys(), ...remoteByDate.keys()]);\n\n  for (const date of allDates) {\n    const localBlock = localByDate.get(date);\n    const remoteBlock = remoteByDate.get(date);\n\n    if (localBlock && remoteBlock) {\n      // Both chains have a block for this date - potential conflict\n      const conflict = detectBlockConflict(localBlock, remoteBlock);\n\n      if (conflict) {\n        conflicts.push(conflict);\n\n        // Apply resolution strategy\n        const resolvedBlock = resolveConflict(conflict, strategy);\n        if (resolvedBlock) {\n          mergedBlocks.set(date, resolvedBlock);\n        }\n      } else {\n        // No conflict - merge entries\n        const mergedBlock = mergeBlockEntries(localBlock, remoteBlock);\n        mergedBlocks.set(date, mergedBlock);\n      }\n    } else if (localBlock) {\n      // Only local block exists\n      mergedBlocks.set(date, localBlock);\n    } else if (remoteBlock) {\n      // Only remote block exists\n      mergedBlocks.set(date, remoteBlock);\n    }\n  }\n\n  // Convert to sorted array and recalculate chain heights\n  const resultBlocks = Array.from(mergedBlocks.values())\n    .sort((a, b) => a.date.localeCompare(b.date))\n    .map((block, index) => ({\n      ...block,\n      chainHeight: index\n    }));\n\n  stats.mergedBlocks = resultBlocks.length;\n  stats.duplicatesRemoved = stats.localBlocks + stats.remoteBlocks - stats.mergedBlocks;\n\n  return {\n    mergedChain: resultBlocks,\n    conflicts,\n    resolutionStrategy: strategy,\n    stats\n  };\n}\n\nfunction detectBlockConflict(\n  localBlock: SyncableLedgerBlock,\n  remoteBlock: SyncableLedgerBlock\n): ChainConflict | null {\n  // Check for hash mismatch (different content for same date)\n  if (localBlock.blockHash !== remoteBlock.blockHash) {\n    return {\n      type: 'hash_mismatch',\n      description: `Different block content for date ${localBlock.date}`,\n      localBlock,\n      remoteBlock\n    };\n  }\n\n  // Check for entry conflicts\n  const hasConflictingEntries = localBlock.entries.some(localEntry => {\n    const conflictingRemoteEntry = remoteBlock.entries.find(remoteEntry =>\n      remoteEntry.id === localEntry.id && remoteEntry.hash !== localEntry.hash\n    );\n    return !!conflictingRemoteEntry;\n  });\n\n  if (hasConflictingEntries) {\n    return {\n      type: 'duplicate_entry',\n      description: `Conflicting entries found for date ${localBlock.date}`,\n      localBlock,\n      remoteBlock\n    };\n  }\n\n  return null; // No conflict\n}\n\nfunction resolveConflict(\n  conflict: ChainConflict,\n  strategy: 'longest' | 'timestamp' | 'manual'\n): SyncableLedgerBlock | null {\n  if (!conflict.localBlock || !conflict.remoteBlock) {\n    return null;\n  }\n\n  switch (strategy) {\n    case 'longest':\n      // Choose block with more entries\n      return conflict.localBlock.entries.length >= conflict.remoteBlock.entries.length\n        ? conflict.localBlock\n        : conflict.remoteBlock;\n\n    case 'timestamp':\n      // Choose block with later update timestamp\n      return conflict.localBlock.updatedAt >= conflict.remoteBlock.updatedAt\n        ? conflict.localBlock\n        : conflict.remoteBlock;\n\n    case 'manual':\n      // Leave for manual resolution - for now, prefer local\n      return { ...conflict.localBlock, conflictResolved: false };\n\n    default:\n      return conflict.localBlock;\n  }\n}\n\nfunction mergeBlockEntries(\n  localBlock: SyncableLedgerBlock,\n  remoteBlock: SyncableLedgerBlock\n): SyncableLedgerBlock {\n  // Combine entries, deduplicating by hash\n  const entryMap = new Map<string, LedgerEntry>();\n\n  // Add local entries first\n  for (const entry of localBlock.entries) {\n    entryMap.set(entry.hash, entry);\n  }\n\n  // Add remote entries (will overwrite locals with same hash)\n  for (const entry of remoteBlock.entries) {\n    entryMap.set(entry.hash, entry);\n  }\n\n  const mergedEntries = Array.from(entryMap.values());\n  const now = new Date().toISOString();\n\n  // Combine author information\n  const authors = [localBlock.author, remoteBlock.author].filter(Boolean);\n  const combinedAuthor = authors.length > 1 ? authors.join('+') : authors[0] || 'unknown';\n\n  return {\n    ...localBlock,\n    entries: mergedEntries,\n    author: combinedAuthor,\n    updatedAt: now,\n    merkleRoot: computeMerkleRoot(mergedEntries.map(e => e.hash)),\n    blockHash: computeBlockHash(\n      localBlock.previousHash,\n      computeMerkleRoot(mergedEntries.map(e => e.hash)),\n      localBlock.date,\n      localBlock.version\n    )\n  };\n}\n\n// ==================== Migration & Legacy Support ====================\n\nexport async function migrateLegacyLedger(workDir?: string): Promise<boolean> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  const legacyLedgerPath = join(getTrieDirectory(projectDir), 'memory', LEDGER_FILENAME);\n\n  // Check if legacy ledger exists\n  if (!existsSync(legacyLedgerPath)) {\n    return false; // No legacy ledger to migrate\n  }\n\n  try {\n    // Load legacy blocks\n    const legacyBlocks = await loadLedger(projectDir);\n\n    // Check if already migrated (v2 format)\n    if (legacyBlocks.length > 0 && (legacyBlocks[0] as any).author !== undefined) {\n      return false; // Already migrated\n    }\n\n    console.log(`Migrating legacy ledger with ${legacyBlocks.length} blocks...`);\n\n    // Convert legacy blocks to syncable blocks\n    const isRepo = await isGitRepo(projectDir);\n    const lastCommit = isRepo ? await getLastCommit(projectDir) : null;\n    const defaultAuthor = lastCommit?.author || 'legacy-migration';\n\n    const migratedBlocks: SyncableLedgerBlock[] = legacyBlocks.map((block, index) => ({\n      ...block,\n      version: LEDGER_VERSION,\n      author: defaultAuthor,\n      chainHeight: index,\n      syncedAt: new Date().toISOString(),\n      ...(lastCommit?.hash && { gitCommit: lastCommit.hash }),\n    }));\n\n    // Initialize shared storage\n    await initializeSharedLedger(projectDir);\n\n    // Save migrated blocks locally\n    await saveLedger(migratedBlocks, projectDir);\n\n    // Push to shared storage\n    await pushLedgerToShared(projectDir);\n\n    // Create backup of original ledger\n    const backupPath = `${legacyLedgerPath}.backup.${Date.now()}`;\n    await writeFile(backupPath, JSON.stringify(legacyBlocks, null, 2));\n\n    console.log(`✓ Migration complete. Backup saved to ${backupPath}`);\n    return true;\n  } catch (error) {\n    console.error('Failed to migrate legacy ledger:', error);\n    return false;\n  }\n}\n\nexport async function detectLegacyLedger(workDir?: string): Promise<boolean> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  const legacyLedgerPath = join(getTrieDirectory(projectDir), 'memory', LEDGER_FILENAME);\n\n  if (!existsSync(legacyLedgerPath)) {\n    return false;\n  }\n\n  try {\n    const blocks = await loadLedger(projectDir);\n    return blocks.length > 0 && (blocks[0] as any).author === undefined;\n  } catch {\n    return false;\n  }\n}\n\n// ==================== Status & Info Functions ====================\n\nexport async function getLedgerSyncStatus(workDir?: string): Promise<{\n  isInitialized: boolean;\n  hasLegacyLedger: boolean;\n  syncState: LedgerSyncState | null;\n  manifest: LedgerManifest | null;\n  localBlocks: number;\n  sharedBlocks: number;\n  conflicts: number;\n}> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n\n  const hasLegacyLedger = await detectLegacyLedger(projectDir);\n  const manifest = await loadManifest(projectDir);\n  const syncState = await loadSyncState(projectDir);\n  const localBlocks = await loadLedger(projectDir);\n  const sharedBlocks = await loadSharedBlocks(projectDir);\n\n  return {\n    isInitialized: !!manifest,\n    hasLegacyLedger,\n    syncState,\n    manifest,\n    localBlocks: localBlocks.length,\n    sharedBlocks: sharedBlocks.length,\n    conflicts: syncState?.conflicts.length || 0\n  };\n}\n\n// ==================== Compression & Archival System ====================\n\nexport async function compressOldBlocks(workDir?: string): Promise<{\n  archived: number;\n  sizeReduction: number;\n}> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  const manifest = await loadManifest(projectDir);\n\n  if (!manifest || !manifest.compressionConfig.enabled) {\n    return { archived: 0, sizeReduction: 0 };\n  }\n\n  const activeDir = getActiveBlocksDir(projectDir);\n  const archivedDir = getArchivedBlocksDir(projectDir);\n  const cutoffDate = new Date();\n  cutoffDate.setDate(cutoffDate.getDate() - manifest.compressionConfig.archiveAfterDays);\n\n  let archivedCount = 0;\n  let originalSize = 0;\n  let compressedSize = 0;\n\n  // Group blocks by month for archival\n  const blocksByMonth = new Map<string, string[]>();\n\n  for (const blockFile of manifest.activeBlocks) {\n    const blockDate = blockFile.replace('.json', '');\n\n    if (new Date(blockDate) < cutoffDate) {\n      const monthKey = blockDate.slice(0, 7); // YYYY-MM\n      if (!blocksByMonth.has(monthKey)) {\n        blocksByMonth.set(monthKey, []);\n      }\n      blocksByMonth.get(monthKey)!.push(blockFile);\n    }\n  }\n\n  // Archive each month\n  for (const [monthKey, blockFiles] of blocksByMonth) {\n    const archivePath = join(archivedDir, `${monthKey}.tar.gz`);\n\n    // Skip if already archived\n    if (existsSync(archivePath)) {\n      continue;\n    }\n\n    console.log(`Archiving ${blockFiles.length} blocks for ${monthKey}...`);\n\n    const monthlyBlocks: SyncableLedgerBlock[] = [];\n    for (const blockFile of blockFiles) {\n      const blockPath = join(activeDir, blockFile);\n\n      try {\n        const stats = await stat(blockPath);\n        originalSize += stats.size;\n\n        const content = await readFile(blockPath, 'utf-8');\n        const block = JSON.parse(content) as SyncableLedgerBlock;\n        monthlyBlocks.push(block);\n      } catch (error) {\n        console.warn(`Failed to read block ${blockFile}:`, error);\n      }\n    }\n\n    // Compress and write archive\n    if (monthlyBlocks.length > 0) {\n      const archiveData = JSON.stringify(monthlyBlocks);\n      const tempPath = `${archivePath}.tmp`;\n\n      // Write compressed archive\n      await pipeline(\n        Buffer.from(archiveData),\n        createGzip({ level: manifest.compressionConfig.compressionLevel }),\n        createWriteStream(tempPath)\n      );\n\n      // Get compressed size\n      const compressedStats = await stat(tempPath);\n      compressedSize += compressedStats.size;\n\n      // Rename to final location\n      await writeFile(archivePath, await readFile(tempPath));\n      await unlink(tempPath);\n\n      // Remove original block files\n      for (const blockFile of blockFiles) {\n        const blockPath = join(activeDir, blockFile);\n        await unlink(blockPath);\n\n        // Remove from manifest\n        const index = manifest.activeBlocks.indexOf(blockFile);\n        if (index > -1) {\n          manifest.activeBlocks.splice(index, 1);\n        }\n      }\n\n      // Add to archived blocks\n      manifest.archivedBlocks.push(`${monthKey}.tar.gz`);\n      archivedCount += blockFiles.length;\n    }\n  }\n\n  // Update manifest\n  if (archivedCount > 0) {\n    await saveManifest(manifest, projectDir);\n  }\n\n  return {\n    archived: archivedCount,\n    sizeReduction: originalSize > 0 ? Math.round(((originalSize - compressedSize) / originalSize) * 100) : 0\n  };\n}\n\n/** Load blocks from archived tar.gz - for read-back from archives */\nexport async function loadArchivedBlocks(\n  projectDir: string,\n  monthKey: string\n): Promise<SyncableLedgerBlock[]> {\n  const archivedDir = getArchivedBlocksDir(projectDir);\n  const archivePath = join(archivedDir, `${monthKey}.tar.gz`);\n\n  if (!existsSync(archivePath)) {\n    return [];\n  }\n\n  try {\n    // Decompress and parse\n    const chunks: Buffer[] = [];\n    await pipeline(\n      createReadStream(archivePath),\n      createGunzip(),\n      async function* (source) {\n        for await (const chunk of source) {\n          chunks.push(chunk);\n        }\n        yield Buffer.concat(chunks);\n      }\n    );\n\n    const decompressedData = Buffer.concat(chunks).toString('utf-8');\n    return JSON.parse(decompressedData) as SyncableLedgerBlock[];\n  } catch (error) {\n    console.error(`Failed to load archived blocks for ${monthKey}:`, error);\n    return [];\n  }\n}\n\nexport async function getStorageStats(workDir?: string): Promise<{\n  activeBlocks: number;\n  archivedBlocks: number;\n  activeSize: number;\n  archivedSize: number;\n  compressionRatio: number;\n  totalEntries: number;\n}> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  const manifest = await loadManifest(projectDir);\n\n  if (!manifest) {\n    return {\n      activeBlocks: 0,\n      archivedBlocks: 0,\n      activeSize: 0,\n      archivedSize: 0,\n      compressionRatio: 0,\n      totalEntries: 0\n    };\n  }\n\n  const activeDir = getActiveBlocksDir(projectDir);\n  const archivedDir = getArchivedBlocksDir(projectDir);\n\n  let activeSize = 0;\n  let archivedSize = 0;\n\n  // Calculate active storage size\n  for (const blockFile of manifest.activeBlocks) {\n    const blockPath = join(activeDir, blockFile);\n    try {\n      if (existsSync(blockPath)) {\n        const stats = await stat(blockPath);\n        activeSize += stats.size;\n      }\n    } catch {\n      // Ignore missing files\n    }\n  }\n\n  // Calculate archived storage size\n  for (const archiveFile of manifest.archivedBlocks) {\n    const archivePath = join(archivedDir, archiveFile);\n    try {\n      if (existsSync(archivePath)) {\n        const stats = await stat(archivePath);\n        archivedSize += stats.size;\n      }\n    } catch {\n      // Ignore missing files\n    }\n  }\n\n  const estimatedUncompressed = archivedSize * 5; // Rough estimate\n  const compressionRatio = estimatedUncompressed > 0\n    ? Math.round((1 - (archivedSize / estimatedUncompressed)) * 100)\n    : 0;\n\n  return {\n    activeBlocks: manifest.activeBlocks.length,\n    archivedBlocks: manifest.archivedBlocks.length,\n    activeSize,\n    archivedSize,\n    compressionRatio,\n    totalEntries: manifest.totalEntries\n  };\n}\n\nexport async function shouldCompress(workDir?: string): Promise<boolean> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  const manifest = await loadManifest(projectDir);\n\n  if (!manifest || !manifest.compressionConfig.enabled) {\n    return false;\n  }\n\n  const stats = await getStorageStats(projectDir);\n\n  // Compress if hot storage exceeds limit or if old blocks exist\n  const exceedsSize = stats.activeSize > manifest.compressionConfig.maxHotStorageSize;\n  const hasOldBlocks = manifest.activeBlocks.some(blockFile => {\n    const blockDate = blockFile.replace('.json', '');\n    const cutoffDate = new Date();\n    cutoffDate.setDate(cutoffDate.getDate() - manifest.compressionConfig.archiveAfterDays);\n    return new Date(blockDate) < cutoffDate;\n  });\n\n  return exceedsSize || hasOldBlocks;\n}\n\n// ==================== Entry Correction Functions (Immutable Ledger) ====================\n\nexport interface CorrectionResult {\n  success: boolean;\n  correctedEntries: number;\n  correctionBlock?: SyncableLedgerBlock;\n  error?: string;\n}\n\n/**\n * Mark ledger entries as corrected by adding a correction entry to the ledger.\n * This maintains immutability - original entries remain in the chain for audit trail.\n * \n * @param entryIds - IDs of entries to mark as corrected\n * @param reason - Reason for the correction (e.g., \"false positive\", \"duplicate\", \"incorrect detection\")\n * @param correctionType - Type of correction: 'corrected' or 'false-positive'\n * @param workDir - Working directory\n * @param author - Author of the correction\n */\nexport async function correctLedgerEntries(\n  entryIds: string[],\n  reason: string,\n  correctionType: 'corrected' | 'false-positive' = 'corrected',\n  workDir?: string,\n  author?: string\n): Promise<CorrectionResult> {\n  if (entryIds.length === 0) {\n    return {\n      success: false,\n      correctedEntries: 0,\n      error: 'No entry IDs provided'\n    };\n  }\n\n  if (!reason || reason.trim().length === 0) {\n    return {\n      success: false,\n      correctedEntries: 0,\n      error: 'Correction reason is required'\n    };\n  }\n\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  const blocks = await loadLedger(projectDir) as SyncableLedgerBlock[];\n\n  // Find entries to correct\n  const entriesToCorrect: LedgerEntry[] = [];\n  for (const block of blocks) {\n    for (const entry of block.entries) {\n      if (entryIds.includes(entry.id) && entry.status === 'active') {\n        entriesToCorrect.push(entry);\n      }\n    }\n  }\n\n  if (entriesToCorrect.length === 0) {\n    return {\n      success: false,\n      correctedEntries: 0,\n      error: 'No active entries found with the provided IDs'\n    };\n  }\n\n  try {\n    const now = new Date().toISOString();\n    const isRepo = await isGitRepo(projectDir);\n    const lastCommit = isRepo ? await getLastCommit(projectDir) : null;\n    const correctionAuthor = author || lastCommit?.author || 'unknown';\n\n    // Create correction entries (append-only: we add new entries that mark the old ones as corrected)\n    const correctionEntries: LedgerEntry[] = entriesToCorrect.map(entry => {\n      const correctionId = `correction-${entry.id}-${Date.now()}`;\n      return {\n        id: correctionId,\n        hash: sha256(`${correctionId}:${entry.hash}:${reason}:${now}`),\n        severity: 'info',\n        file: entry.file,\n        agent: 'ledger-correction',\n        timestamp: now,\n        status: 'active',\n        correction: `Correcting entry ${entry.id}: ${reason}`,\n        correctedBy: entry.id,\n      };\n    });\n\n    // Update original entries in their blocks to mark them as corrected\n    for (const block of blocks) {\n      let blockModified = false;\n      for (const entry of block.entries) {\n        if (entryIds.includes(entry.id) && entry.status === 'active') {\n          entry.status = correctionType;\n          entry.correctionTimestamp = now;\n          entry.correction = reason;\n          blockModified = true;\n        }\n      }\n      \n      if (blockModified) {\n        // Recalculate merkle root and block hash\n        block.merkleRoot = computeMerkleRoot(block.entries.map(e => e.hash));\n        block.blockHash = computeBlockHash(\n          block.previousHash,\n          block.merkleRoot,\n          block.date,\n          block.version\n        );\n        block.updatedAt = now;\n      }\n    }\n\n    // Save updated blocks\n    await saveLedger(blocks, projectDir);\n\n    // Append correction entries as a new block\n    const correctionBlock = await appendIssuesToLedger(\n      correctionEntries.map(entry => ({\n        id: entry.id,\n        hash: entry.hash,\n        severity: entry.severity,\n        issue: entry.correction || '',\n        fix: '',\n        file: entry.file,\n        line: 0,\n        agent: entry.agent,\n        category: 'correction',\n        timestamp: entry.timestamp,\n        project: '',\n        resolved: false,\n        resolvedAt: undefined,\n      })),\n      projectDir,\n      correctionAuthor\n    );\n\n    return {\n      success: true,\n      correctedEntries: entriesToCorrect.length,\n      ...(correctionBlock && { correctionBlock }),\n    };\n  } catch (error) {\n    return {\n      success: false,\n      correctedEntries: 0,\n      error: `Failed to correct entries: ${error instanceof Error ? error.message : 'Unknown error'}`\n    };\n  }\n}\n\n/**\n * Get all entries from the ledger, optionally filtering by status.\n * By default, only returns active entries (excludes corrected/false-positives).\n */\nexport async function getLedgerEntries(\n  workDir?: string,\n  includeStatus?: Array<'active' | 'corrected' | 'false-positive'>\n): Promise<LedgerEntry[]> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  const blocks = await loadLedger(projectDir);\n  \n  const statusFilter = includeStatus || ['active'];\n  const entries: LedgerEntry[] = [];\n  \n  for (const block of blocks) {\n    for (const entry of block.entries) {\n      const entryStatus = entry.status || 'active';\n      if (statusFilter.includes(entryStatus as any)) {\n        entries.push(entry);\n      }\n    }\n  }\n  \n  return entries;\n}\n\n/**\n * Get correction history for specific entry IDs.\n * Returns the original entry and any correction entries.\n */\nexport async function getEntryCorrectionHistory(\n  entryIds: string[],\n  workDir?: string\n): Promise<Map<string, { original: LedgerEntry; corrections: LedgerEntry[] }>> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  const blocks = await loadLedger(projectDir);\n  \n  const history = new Map<string, { original: LedgerEntry; corrections: LedgerEntry[] }>();\n  \n  for (const entryId of entryIds) {\n    const corrections: LedgerEntry[] = [];\n    let original: LedgerEntry | null = null;\n    \n    for (const block of blocks) {\n      for (const entry of block.entries) {\n        if (entry.id === entryId) {\n          original = entry;\n        }\n        if (entry.correctedBy === entryId) {\n          corrections.push(entry);\n        }\n      }\n    }\n    \n    if (original) {\n      history.set(entryId, { original, corrections });\n    }\n  }\n  \n  return history;\n}\n\n/**\n * Get statistics about ledger corrections\n */\nexport async function getCorrectionStats(workDir?: string): Promise<{\n  totalEntries: number;\n  activeEntries: number;\n  correctedEntries: number;\n  falsePositives: number;\n  correctionRate: number;\n}> {\n  const projectDir = workDir || getWorkingDirectory(undefined, true);\n  const blocks = await loadLedger(projectDir);\n  \n  let totalEntries = 0;\n  let activeEntries = 0;\n  let correctedEntries = 0;\n  let falsePositives = 0;\n  \n  for (const block of blocks) {\n    for (const entry of block.entries) {\n      totalEntries++;\n      const status = entry.status || 'active';\n      \n      if (status === 'active') activeEntries++;\n      else if (status === 'corrected') correctedEntries++;\n      else if (status === 'false-positive') falsePositives++;\n    }\n  }\n  \n  const correctionRate = totalEntries > 0 \n    ? ((correctedEntries + falsePositives) / totalEntries) * 100 \n    : 0;\n  \n  return {\n    totalEntries,\n    activeEntries,\n    correctedEntries,\n    falsePositives,\n    correctionRate: Math.round(correctionRate * 100) / 100\n  };\n}\n","import { existsSync } from 'node:fs';\nimport path from 'node:path';\nimport { runExecFile } from '../utils/command-runner.js';\n\nexport interface Commit {\n  hash: string;\n  author: string;\n  date: string;\n  message: string;\n}\n\nexport interface Change {\n  path: string;\n  status: string;\n  oldPath?: string;\n}\n\nasync function execGit(args: string[], cwd: string): Promise<string | null> {\n  try {\n    const { stdout } = await runExecFile(\n      'git',\n      ['-C', cwd, ...args],\n      { actor: 'internal:git', triggeredBy: 'manual', targetPath: cwd },\n      { maxBuffer: 10 * 1024 * 1024, captureOutput: false }\n    );\n    return stdout.trim();\n  } catch (error: any) {\n    const stderr: string | undefined = error?.stderr?.toString();\n    // Gracefully handle non-git directories and repos with no commits\n    if (stderr?.includes('not a git repository') || stderr?.includes('does not have any commits')) {\n      return null;\n    }\n    throw error;\n  }\n}\n\nasync function ensureRepo(projectPath: string): Promise<boolean> {\n  const result = await execGit(['rev-parse', '--is-inside-work-tree'], projectPath);\n  return result === 'true';\n}\n\nfunction parseNameStatus(output: string): Change[] {\n  return output\n    .split('\\n')\n    .map((line) => line.trim())\n    .filter(Boolean)\n    .map((line) => {\n      const parts = line.split('\\t');\n      const status = parts[0] ?? '';\n      const filePath = parts[1] ?? '';\n      const oldPath = parts[2];\n      const change: Change = { status, path: filePath };\n      if (oldPath) change.oldPath = oldPath;\n      return change;\n    })\n    .filter((entry) => entry.path.length > 0);\n}\n\nexport async function getRecentCommits(projectPath: string, limit: number): Promise<Commit[]> {\n  const isRepo = await ensureRepo(projectPath);\n  if (!isRepo) return [];\n\n  const output = await execGit(\n    ['log', `-n`, String(limit), '--pretty=format:%H%x09%an%x09%ad%x09%s', '--date=iso'],\n    projectPath\n  );\n\n  if (!output) return [];\n\n  return output.split('\\n').map((line) => {\n    const [hash, author, date, message] = line.split('\\t');\n    return { hash, author, date, message } as Commit;\n  });\n}\n\nexport async function getLastCommit(projectPath: string): Promise<Commit | null> {\n  const commits = await getRecentCommits(projectPath, 1);\n  return commits[0] ?? null;\n}\n\nexport async function getStagedChanges(projectPath: string): Promise<Change[]> {\n  const isRepo = await ensureRepo(projectPath);\n  if (!isRepo) return [];\n\n  const output = await execGit(['diff', '--cached', '--name-status'], projectPath);\n  if (!output) return [];\n  return parseNameStatus(output);\n}\n\nexport async function getUncommittedChanges(projectPath: string): Promise<Change[]> {\n  const isRepo = await ensureRepo(projectPath);\n  if (!isRepo) return [];\n\n  const changes: Change[] = [];\n\n  const unstaged = await execGit(['diff', '--name-status'], projectPath);\n  if (unstaged) {\n    changes.push(...parseNameStatus(unstaged));\n  }\n\n  const untracked = await execGit(['ls-files', '--others', '--exclude-standard'], projectPath);\n  if (untracked) {\n    changes.push(\n      ...untracked\n        .split('\\n')\n        .map((p) => p.trim())\n        .filter(Boolean)\n        .map((p) => ({ status: '??', path: p }))\n    );\n  }\n\n  return changes;\n}\n\n/**\n * Get a flat list of changed file paths in the working tree.\n * Convenience helper used by tooling (e.g. cache invalidation).\n *\n * Returns null if not a git repository.\n */\nexport async function getGitChangedFiles(projectPath: string): Promise<string[] | null> {\n  const isRepo = await ensureRepo(projectPath);\n  if (!isRepo) return null;\n\n  const [staged, uncommitted] = await Promise.all([\n    getStagedChanges(projectPath).catch(() => []),\n    getUncommittedChanges(projectPath).catch(() => []),\n  ]);\n\n  const paths = new Set<string>();\n  for (const change of [...staged, ...uncommitted]) {\n    if (change.path) paths.add(change.path);\n    if (change.oldPath) paths.add(change.oldPath);\n  }\n\n  return [...paths];\n}\n\nexport async function getDiff(projectPath: string, commitHash: string): Promise<string> {\n  const isRepo = await ensureRepo(projectPath);\n  if (!isRepo) return '';\n\n  const diff = await execGit(['show', commitHash, '--unified=3', '--no-color'], projectPath);\n  return diff ?? '';\n}\n\nexport async function getWorkingTreeDiff(projectPath: string, stagedOnly = false): Promise<string> {\n  const isRepo = await ensureRepo(projectPath);\n  if (!isRepo) return '';\n\n  const args = stagedOnly ? ['diff', '--cached', '--unified=3', '--no-color'] : ['diff', '--unified=3', '--no-color'];\n  const diff = await execGit(args, projectPath);\n  return diff ?? '';\n}\n\nexport async function getUnpushedCommits(projectPath: string): Promise<Commit[]> {\n  const isRepo = await ensureRepo(projectPath);\n  if (!isRepo) return [];\n\n  // Handles detached HEAD by falling back to HEAD if upstream missing\n  const upstream = await execGit(['rev-parse', '--abbrev-ref', '--symbolic-full-name', '@{u}'], projectPath);\n  if (!upstream) {\n    return getRecentCommits(projectPath, 10);\n  }\n\n  const output = await execGit(['log', `${upstream}..HEAD`, '--pretty=format:%H%x09%an%x09%ad%x09%s', '--date=iso'], projectPath);\n  if (!output) return [];\n\n  return output.split('\\n').filter(Boolean).map((line) => {\n    const [hash, author, date, message] = line.split('\\t');\n    return { hash, author, date, message } as Commit;\n  });\n}\n\nexport function resolveRepoPath(projectPath: string): string {\n  const gitDir = path.join(projectPath, '.git');\n  if (existsSync(gitDir)) return projectPath;\n  return projectPath;\n}\n\n/**\n * Check if the given path is inside a git repository\n */\nexport async function isGitRepo(projectPath: string): Promise<boolean> {\n  const result = await execGit(['rev-parse', '--is-inside-work-tree'], projectPath);\n  return result === 'true';\n}\n\n/**\n * Get files changed since a given timestamp\n * Uses git log to find commits after timestamp, then gets affected files\n * Returns null if not a git repo or on error\n */\nexport async function getChangedFilesSinceTimestamp(\n  projectPath: string,\n  timestamp: number\n): Promise<string[] | null> {\n  const isRepo = await isGitRepo(projectPath);\n  if (!isRepo) return null;\n\n  try {\n    // Convert timestamp to ISO date for git\n    const sinceDate = new Date(timestamp).toISOString();\n    \n    // Set timeout for git operations (5 seconds total)\n    const GIT_TIMEOUT_MS = 5000;\n    const startTime = Date.now();\n    \n    // Get all files that changed in commits since the timestamp\n    // Use Promise.race to timeout if git operations take too long\n    const committedChangesPromise = execGit(\n      ['log', `--since=${sinceDate}`, '--name-only', '--pretty=format:'],\n      projectPath\n    );\n    const committedChangesTimeout = new Promise<string | null>((resolve) => {\n      setTimeout(() => resolve(null), GIT_TIMEOUT_MS);\n    });\n    const committedChanges = await Promise.race([committedChangesPromise, committedChangesTimeout]);\n\n    // Check if we've exceeded timeout\n    if (Date.now() - startTime > GIT_TIMEOUT_MS) {\n      return null;\n    }\n\n    // Get currently modified files (staged + unstaged) - run in parallel with timeout\n    const stagedPromise = execGit(['diff', '--cached', '--name-only'], projectPath);\n    const unstagedPromise = execGit(['diff', '--name-only'], projectPath);\n    const untrackedPromise = execGit(\n      ['ls-files', '--others', '--exclude-standard'],\n      projectPath\n    );\n    \n    const timeoutPromise = new Promise<null>((resolve) => {\n      setTimeout(() => resolve(null), Math.max(0, GIT_TIMEOUT_MS - (Date.now() - startTime)));\n    });\n    \n    const [stagedChanges, unstagedChanges, untrackedFiles] = await Promise.race([\n      Promise.all([stagedPromise, unstagedPromise, untrackedPromise]),\n      timeoutPromise.then(() => [null, null, null] as const)\n    ]);\n\n    // Combine all changed files\n    const changedFiles = new Set<string>();\n    \n    const addFiles = (output: string | null) => {\n      if (output) {\n        output.split('\\n')\n          .map(f => f.trim())\n          .filter(Boolean)\n          .forEach(f => changedFiles.add(path.join(projectPath, f)));\n      }\n    };\n\n    addFiles(committedChanges);\n    addFiles(stagedChanges);\n    addFiles(unstagedChanges);\n    addFiles(untrackedFiles);\n\n    return Array.from(changedFiles);\n  } catch {\n    return null;\n  }\n}\n","/**\n * Command Runner (with audit logging)\n *\n * Goal: Whenever Trie runs a shell command, record:\n * - command string\n * - exit code\n * - duration\n * - optional (redacted) stdout/stderr\n */\nimport { exec, execFile, execSync, type ExecException } from 'node:child_process';\nimport { promisify } from 'node:util';\n\nimport {\n  createAuditEntry,\n  completeAuditEntry,\n  logSkillExecution,\n  type ExecutedCommand,\n  type SkillExecution,\n} from './audit-logger.js';\n\nconst execAsync = promisify(exec);\nconst execFileAsync = promisify(execFile);\n\nexport type { ExecutedCommand, SkillExecution };\nexport type AuditTriggeredBy = SkillExecution['triggeredBy'];\n\nexport interface CommandAuditContext {\n  /** Shown as `skillName` in audit logs; use something like `tool:pr-review` */\n  actor: string;\n  /** Where this came from in the product flow */\n  triggeredBy: AuditTriggeredBy;\n  /** Usually the working directory / repo path */\n  targetPath: string;\n  /** Optional string for `skillSource` */\n  source?: string;\n}\n\nexport interface RunCommandOptions {\n  cwd?: string;\n  timeoutMs?: number;\n  maxBuffer?: number;\n\n  /** Capture stdout/stderr in the audit log */\n  captureOutput?: boolean;\n  /** Redact obvious secrets from captured output */\n  redactOutput?: boolean;\n  /** Max chars to keep per output stream */\n  maxOutputChars?: number;\n}\n\nfunction redact(text: string): string {\n  // Keep this conservative to avoid false redaction and avoid expensive processing.\n  return text\n    // Common key=value secrets\n    .replace(/\\b(AWS|ANTHROPIC|OPENAI|GITHUB)_[A-Z0-9_]*\\s*=\\s*([^\\s\"'`]+)/gi, '$1_<REDACTED>=<REDACTED>')\n    // Bearer tokens\n    .replace(/\\bBearer\\s+[A-Za-z0-9\\-._~+/]+=*\\b/g, 'Bearer <REDACTED>')\n    // GitHub tokens / generic tokens\n    .replace(/\\bghp_[A-Za-z0-9]{20,}\\b/g, 'ghp_<REDACTED>')\n    .replace(/\\b(?:xox[baprs]-)[A-Za-z0-9-]{10,}\\b/g, '<REDACTED_SLACK_TOKEN>')\n    // AWS access key id (best-effort)\n    .replace(/\\bAKIA[0-9A-Z]{16}\\b/g, 'AKIA<REDACTED>');\n}\n\nfunction clampOutput(text: string, maxChars: number): string {\n  if (text.length <= maxChars) return text;\n  return text.slice(0, maxChars) + `\\n…(truncated ${text.length - maxChars} chars)`;\n}\n\nfunction buildCommandRecord(command: string): ExecutedCommand {\n  return {\n    command,\n    timestamp: new Date().toISOString(),\n  };\n}\n\nasync function finalizeAndWrite(\n  entry: SkillExecution,\n  cmd: ExecutedCommand,\n  outcome: { success: boolean; exitCode?: number; stdout?: string; stderr?: string; error?: string; startedAt: number },\n  options?: Pick<RunCommandOptions, 'captureOutput' | 'redactOutput' | 'maxOutputChars'>\n): Promise<void> {\n  const duration = Date.now() - outcome.startedAt;\n  cmd.duration = duration;\n  if (outcome.exitCode !== undefined) {\n    cmd.exitCode = outcome.exitCode;\n  }\n\n  const captureOutput = options?.captureOutput ?? false;\n  const redactOutput = options?.redactOutput ?? true;\n  const maxOutputChars = options?.maxOutputChars ?? 2000;\n\n  if (captureOutput) {\n    const out = outcome.stdout ?? '';\n    const err = outcome.stderr ?? '';\n    cmd.stdout = redactOutput ? redact(clampOutput(out, maxOutputChars)) : clampOutput(out, maxOutputChars);\n    cmd.stderr = redactOutput ? redact(clampOutput(err, maxOutputChars)) : clampOutput(err, maxOutputChars);\n  }\n\n  const completed = completeAuditEntry(entry, outcome.success, outcome.error);\n  await logSkillExecution(completed);\n}\n\nexport async function runShellCommand(\n  command: string,\n  audit: CommandAuditContext,\n  options?: RunCommandOptions\n): Promise<{ stdout: string; stderr: string; exitCode: number }> {\n  const startedAt = Date.now();\n  const entry = createAuditEntry(audit.actor, audit.source ?? 'trie', audit.triggeredBy, audit.targetPath);\n  const cmd = buildCommandRecord(command);\n  entry.commands?.push(cmd);\n\n  try {\n    const { stdout, stderr } = await execAsync(command, {\n      cwd: options?.cwd,\n      timeout: options?.timeoutMs,\n      maxBuffer: options?.maxBuffer,\n    });\n\n    await finalizeAndWrite(entry, cmd, { success: true, exitCode: 0, stdout, stderr, startedAt }, options);\n    return { stdout: stdout ?? '', stderr: stderr ?? '', exitCode: 0 };\n  } catch (e) {\n    const err = e as ExecException & { stdout?: unknown; stderr?: unknown; code?: unknown };\n    const stdout = typeof err.stdout === 'string' ? err.stdout : '';\n    const stderr = typeof err.stderr === 'string' ? err.stderr : '';\n    const exitCode = typeof err.code === 'number' ? err.code : 1;\n\n    await finalizeAndWrite(\n      entry,\n      cmd,\n      { success: false, exitCode, stdout, stderr, error: err.message, startedAt },\n      // Capture output for failures by default (so audits are useful)\n      { ...options, captureOutput: options?.captureOutput ?? true }\n    );\n\n    return { stdout, stderr, exitCode };\n  }\n}\n\nexport function runShellCommandSync(\n  command: string,\n  audit: CommandAuditContext,\n  options?: Omit<RunCommandOptions, 'timeoutMs'> & { timeoutMs?: number }\n): { stdout: string; exitCode: number } {\n  const startedAt = Date.now();\n  const entry = createAuditEntry(audit.actor, audit.source ?? 'trie', audit.triggeredBy, audit.targetPath);\n  const cmd = buildCommandRecord(command);\n  entry.commands?.push(cmd);\n\n  try {\n    const stdout = execSync(command, {\n      cwd: options?.cwd,\n      timeout: options?.timeoutMs,\n      maxBuffer: options?.maxBuffer,\n      encoding: 'utf-8',\n      stdio: ['pipe', 'pipe', 'pipe'],\n    });\n\n    // Fire-and-forget write; sync APIs can’t await.\n    void finalizeAndWrite(entry, cmd, { success: true, exitCode: 0, stdout, stderr: '', startedAt }, options);\n    return { stdout: stdout ?? '', exitCode: 0 };\n  } catch (e) {\n    const err = e as ExecException & { stdout?: unknown; stderr?: unknown; status?: unknown };\n    const stdout = typeof err.stdout === 'string' ? err.stdout : '';\n    const stderr = typeof err.stderr === 'string' ? err.stderr : '';\n    const exitCode = typeof err.status === 'number' ? err.status : 1;\n\n    void finalizeAndWrite(\n      entry,\n      cmd,\n      { success: false, exitCode, stdout, stderr, error: err.message, startedAt },\n      { ...options, captureOutput: options?.captureOutput ?? true }\n    );\n\n    return { stdout, exitCode };\n  }\n}\n\nexport async function runExecFile(\n  file: string,\n  args: string[],\n  audit: CommandAuditContext,\n  options?: Omit<RunCommandOptions, 'timeoutMs'> & { timeoutMs?: number }\n): Promise<{ stdout: string; stderr: string; exitCode: number }> {\n  const startedAt = Date.now();\n  const command = [file, ...args].join(' ');\n  const entry = createAuditEntry(audit.actor, audit.source ?? 'trie', audit.triggeredBy, audit.targetPath);\n  const cmd = buildCommandRecord(command);\n  entry.commands?.push(cmd);\n\n  try {\n    const { stdout, stderr } = await execFileAsync(file, args, {\n      cwd: options?.cwd,\n      timeout: options?.timeoutMs,\n      maxBuffer: options?.maxBuffer,\n    });\n\n    await finalizeAndWrite(entry, cmd, { success: true, exitCode: 0, stdout: String(stdout ?? ''), stderr: String(stderr ?? ''), startedAt }, options);\n    return { stdout: String(stdout ?? ''), stderr: String(stderr ?? ''), exitCode: 0 };\n  } catch (e) {\n    const err = e as ExecException & { stdout?: unknown; stderr?: unknown; code?: unknown };\n    const stdout = typeof err.stdout === 'string' ? err.stdout : '';\n    const stderr = typeof err.stderr === 'string' ? err.stderr : '';\n    const exitCode = typeof err.code === 'number' ? err.code : 1;\n\n    await finalizeAndWrite(\n      entry,\n      cmd,\n      { success: false, exitCode, stdout, stderr, error: err.message, startedAt },\n      { ...options, captureOutput: options?.captureOutput ?? true }\n    );\n    return { stdout, stderr, exitCode };\n  }\n}\n\n","/**\n * Audit logger stub\n *\n * Audit functionality has been integrated into the decision ledger.\n * This module exists to keep legacy CLI/tooling paths working without the old skills system.\n */\n\nexport interface AuditStatistics {\n  totalScans: number;\n  totalIssues: number;\n  criticalCount: number;\n  seriousCount: number;\n  moderateCount: number;\n  lowCount: number;\n  totalExecutions: number;\n  successfulExecutions: number;\n  failedExecutions: number;\n  uniqueSkills: number;\n  totalCommands: number;\n  blockedCommands: number;\n  totalNetworkCalls: number;\n  blockedNetworkCalls: number;\n}\n\nexport interface AuditEntry {\n  id: string;\n  timestamp: string;\n  command: string;\n  status: string;\n  commands?: ExecutedCommand[];\n}\n\nexport interface ExecutedCommand {\n  command: string;\n  timestamp: string;\n  exitCode?: number;\n  duration?: number;\n  stdout?: string;\n  stderr?: string;\n}\n\nexport interface SkillExecution {\n  skillName: string;\n  skillSource: string;\n  triggeredBy: 'scan' | 'mcp' | 'cli' | 'watch' | 'manual';\n  targetPath: string;\n  startedAt: string;\n  completedAt?: string;\n  success?: boolean;\n  error?: string;\n  commands?: ExecutedCommand[];\n}\n\nexport function formatAuditLog(_entry: AuditEntry): string {\n  return 'Audit logging has been integrated into the decision ledger';\n}\n\nexport function getAuditStatistics(): AuditStatistics {\n  return {\n    totalScans: 0,\n    totalIssues: 0,\n    criticalCount: 0,\n    seriousCount: 0,\n    moderateCount: 0,\n    lowCount: 0,\n    totalExecutions: 0,\n    successfulExecutions: 0,\n    failedExecutions: 0,\n    uniqueSkills: 0,\n    totalCommands: 0,\n    blockedCommands: 0,\n    totalNetworkCalls: 0,\n    blockedNetworkCalls: 0,\n  };\n}\n\nexport function createAuditEntry(\n  skillName: string,\n  skillSource: string,\n  triggeredBy: SkillExecution['triggeredBy'],\n  targetPath: string\n): SkillExecution {\n  return {\n    skillName,\n    skillSource,\n    triggeredBy,\n    targetPath,\n    startedAt: new Date().toISOString(),\n    commands: [],\n  };\n}\n\nexport function completeAuditEntry(\n  entry: SkillExecution,\n  success: boolean,\n  error?: string\n): SkillExecution {\n  const result: SkillExecution = {\n    ...entry,\n    completedAt: new Date().toISOString(),\n    success,\n  };\n  if (error !== undefined) {\n    result.error = error;\n  }\n  return result;\n}\n\nexport async function logSkillExecution(_execution: SkillExecution): Promise<void> {\n  // Stub - no-op\n}\n\nexport async function getRecentAuditLogs(_limit: number = 10): Promise<AuditEntry[]> {\n  return [];\n}\n\nexport async function getSkillAuditLogs(_skillName: string): Promise<AuditEntry[]> {\n  return [];\n}\n\n","/**\n * Cryptographic Key Management\n * \n * Ed25519 signature support for ledger entries.\n * Keys are stored in .trie/keys/ directory.\n * \n * Usage:\n * - generateKeyPair() - Create new signing key\n * - getOrCreateKeyPair() - Get existing or create new\n * - signData() - Sign arbitrary data\n * - verifySignature() - Verify a signature\n */\n\nimport * as ed25519 from '@noble/ed25519';\nimport { randomBytes } from 'crypto';\nimport { existsSync, mkdirSync, readFileSync, writeFileSync } from 'fs';\nimport { join } from 'path';\nimport { getTrieDirectory } from '../utils/workspace.js';\n\nexport interface KeyPair {\n  publicKey: string;   // Hex-encoded public key\n  privateKey: string;  // Hex-encoded private key\n}\n\nexport interface SignatureData {\n  signature: string;\n  publicKey: string;\n  algorithm: 'Ed25519';\n  signedAt: string;\n}\n\n/**\n * Get keys directory path\n */\nfunction getKeysDirectory(workDir?: string): string {\n  const trieDir = getTrieDirectory(workDir || process.cwd());\n  return join(trieDir, 'keys');\n}\n\n/**\n * Get the default key file path\n */\nfunction getDefaultKeyPath(workDir?: string): string {\n  return join(getKeysDirectory(workDir), 'signing-key.json');\n}\n\n/**\n * Generate a new Ed25519 key pair\n */\nexport async function generateKeyPair(): Promise<KeyPair> {\n  // Generate 32 random bytes for private key\n  const privateKeyBytes = randomBytes(32);\n  const publicKeyBytes = await ed25519.getPublicKeyAsync(privateKeyBytes);\n  \n  return {\n    publicKey: Buffer.from(publicKeyBytes).toString('hex'),\n    privateKey: Buffer.from(privateKeyBytes).toString('hex')\n  };\n}\n\n/**\n * Save key pair to disk (encrypted would be better, but starting simple)\n */\nexport function saveKeyPair(keyPair: KeyPair, workDir?: string): void {\n  const keysDir = getKeysDirectory(workDir);\n  \n  // Create keys directory if it doesn't exist\n  if (!existsSync(keysDir)) {\n    mkdirSync(keysDir, { recursive: true });\n  }\n  \n  const keyPath = getDefaultKeyPath(workDir);\n  const keyData = {\n    ...keyPair,\n    createdAt: new Date().toISOString(),\n    version: 1\n  };\n  \n  writeFileSync(keyPath, JSON.stringify(keyData, null, 2), 'utf-8');\n  \n  // Warn about security\n  console.error('⚠️  Signing key created at:', keyPath);\n  console.error('    Keep this file secure and add to .gitignore');\n}\n\n/**\n * Load key pair from disk\n */\nexport function loadKeyPair(workDir?: string): KeyPair | null {\n  const keyPath = getDefaultKeyPath(workDir);\n  \n  if (!existsSync(keyPath)) {\n    return null;\n  }\n  \n  try {\n    const keyData = JSON.parse(readFileSync(keyPath, 'utf-8'));\n    return {\n      publicKey: keyData.publicKey,\n      privateKey: keyData.privateKey\n    };\n  } catch (error) {\n    console.error('Failed to load signing key:', error);\n    return null;\n  }\n}\n\n/**\n * Get existing key pair or create a new one\n */\nexport async function getOrCreateKeyPair(workDir?: string): Promise<KeyPair> {\n  const existing = loadKeyPair(workDir);\n  if (existing) {\n    return existing;\n  }\n  \n  const newKeyPair = await generateKeyPair();\n  saveKeyPair(newKeyPair, workDir);\n  return newKeyPair;\n}\n\n/**\n * Sign arbitrary data with private key\n */\nexport async function signData(data: string, privateKey: string): Promise<string> {\n  const dataBytes = Buffer.from(data, 'utf-8');\n  const privateKeyBytes = Buffer.from(privateKey, 'hex');\n  const signatureBytes = await ed25519.signAsync(dataBytes, privateKeyBytes);\n  \n  return Buffer.from(signatureBytes).toString('hex');\n}\n\n/**\n * Verify a signature\n */\nexport async function verifySignature(\n  data: string,\n  signature: string,\n  publicKey: string\n): Promise<boolean> {\n  try {\n    const dataBytes = Buffer.from(data, 'utf-8');\n    const signatureBytes = Buffer.from(signature, 'hex');\n    const publicKeyBytes = Buffer.from(publicKey, 'hex');\n    \n    return await ed25519.verifyAsync(signatureBytes, dataBytes, publicKeyBytes);\n  } catch (error) {\n    console.error('Signature verification failed:', error);\n    return false;\n  }\n}\n\n/**\n * Sign a data hash and return signature metadata\n */\nexport async function signHash(hash: string, workDir?: string): Promise<SignatureData> {\n  const keyPair = await getOrCreateKeyPair(workDir);\n  const signature = await signData(hash, keyPair.privateKey);\n  \n  return {\n    signature,\n    publicKey: keyPair.publicKey,\n    algorithm: 'Ed25519',\n    signedAt: new Date().toISOString()\n  };\n}\n\n/**\n * Verify a hash signature\n */\nexport async function verifyHashSignature(\n  hash: string,\n  signatureData: SignatureData\n): Promise<boolean> {\n  if (signatureData.algorithm !== 'Ed25519') {\n    console.error('Unsupported signature algorithm:', signatureData.algorithm);\n    return false;\n  }\n  \n  return await verifySignature(hash, signatureData.signature, signatureData.publicKey);\n}\n\n/**\n * Get the public key for the current workspace\n */\nexport function getPublicKey(workDir?: string): string | null {\n  const keyPair = loadKeyPair(workDir);\n  return keyPair?.publicKey || null;\n}\n\n/**\n * Check if signing keys exist\n */\nexport function hasSigningKey(workDir?: string): boolean {\n  const keyPath = getDefaultKeyPath(workDir);\n  return existsSync(keyPath);\n}\n","/**\n * Git Integration for Ledger\n * \n * Auto-commit ledger changes to provide:\n * - Distributed backup (every clone has a copy)\n * - Git's content-addressable storage (tamper-evident)\n * - History tracking via commit graph\n * - Remote backup via push\n * \n * Usage:\n * - autoCommitLedger() - Commit ledger changes after append\n * - isGitIntegrationEnabled() - Check if Git integration is on\n */\n\nimport { exec } from 'child_process';\nimport { promisify } from 'util';\nimport { existsSync } from 'fs';\nimport { join } from 'path';\nimport { getTrieDirectory } from '../utils/workspace.js';\n\nconst execAsync = promisify(exec);\n\nexport interface GitCommitResult {\n  committed: boolean;\n  commitHash?: string;\n  error?: string;\n}\n\n/**\n * Check if Git integration is enabled for this project\n * \n * Git integration is enabled if:\n * 1. Project is a git repo\n * 2. .trie/config.json has gitIntegration: true (or doesn't exist, defaults to true)\n */\nexport async function isGitIntegrationEnabled(workDir: string): Promise<boolean> {\n  try {\n    // Check if git repo\n    const gitDir = join(workDir, '.git');\n    if (!existsSync(gitDir)) {\n      return false;\n    }\n    \n    // Check config (default to true if config doesn't exist)\n    const configPath = join(getTrieDirectory(workDir), 'config.json');\n    if (!existsSync(configPath)) {\n      return true; // Default: enabled\n    }\n    \n    const config = JSON.parse(await import('fs/promises').then(fs => fs.readFile(configPath, 'utf-8')));\n    return config.gitIntegration !== false;\n  } catch {\n    return false;\n  }\n}\n\n/**\n * Auto-commit ledger changes\n * \n * Commits ledger.json to git with a structured commit message.\n * This provides distributed backup and tamper-evident history.\n */\nexport async function autoCommitLedger(workDir: string, message?: string): Promise<GitCommitResult> {\n  try {\n    const enabled = await isGitIntegrationEnabled(workDir);\n    if (!enabled) {\n      return { committed: false, error: 'Git integration disabled' };\n    }\n    \n    const ledgerPath = join(getTrieDirectory(workDir), 'memory', 'ledger.json');\n    \n    // Check if ledger has changes\n    const { stdout: statusOutput } = await execAsync('git status --porcelain', { cwd: workDir });\n    const hasLedgerChanges = statusOutput.includes('ledger.json');\n    \n    if (!hasLedgerChanges) {\n      return { committed: false, error: 'No ledger changes to commit' };\n    }\n    \n    // Stage ledger file\n    await execAsync(`git add ${ledgerPath}`, { cwd: workDir });\n    \n    // Commit with structured message\n    const commitMessage = message || 'ledger: append entries';\n    await execAsync(\n      `git commit -m \"${commitMessage}\"`,\n      { cwd: workDir }\n    );\n    \n    // Get commit hash\n    const { stdout: hashOutput } = await execAsync('git rev-parse HEAD', { cwd: workDir });\n    const commitHash = hashOutput.trim();\n    \n    return {\n      committed: true,\n      commitHash\n    };\n  } catch (error) {\n    return {\n      committed: false,\n      error: error instanceof Error ? error.message : String(error)\n    };\n  }\n}\n\n/**\n * Enable or disable Git integration\n */\nexport async function setGitIntegration(workDir: string, enabled: boolean): Promise<void> {\n  const configPath = join(getTrieDirectory(workDir), 'config.json');\n  const fs = await import('fs/promises');\n  \n  let config: Record<string, any> = {};\n  if (existsSync(configPath)) {\n    config = JSON.parse(await fs.readFile(configPath, 'utf-8'));\n  }\n  \n  config.gitIntegration = enabled;\n  await fs.writeFile(configPath, JSON.stringify(config, null, 2), 'utf-8');\n}\n\n/**\n * Add .trie/keys/ to .gitignore\n * \n * Signing keys should NOT be committed to git.\n * This ensures they stay local and secure.\n */\nexport async function ensureKeysIgnored(workDir: string): Promise<void> {\n  try {\n    const gitignorePath = join(workDir, '.gitignore');\n    const fs = await import('fs/promises');\n    \n    let gitignore = '';\n    if (existsSync(gitignorePath)) {\n      gitignore = await fs.readFile(gitignorePath, 'utf-8');\n    }\n    \n    // Check if already ignored\n    if (gitignore.includes('.trie/keys/')) {\n      return;\n    }\n    \n    // Add to gitignore\n    const addition = '\\n# Trie signing keys (keep secure, do not commit)\\n.trie/keys/\\n';\n    await fs.appendFile(gitignorePath, addition, 'utf-8');\n  } catch (error) {\n    console.error('Failed to update .gitignore:', error);\n  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package/dist/{chunk-APMV77PU.js → chunk-JKEEQAG2.js}

@@ -310,4 +310,4 @@ export {
   getProgressReporter,
   resetProgressReporter
 };
-//# sourceMappingURL=chunk-APMV77PU.js.map
+//# sourceMappingURL=chunk-JKEEQAG2.js.map

package/dist/chunk-JKEEQAG2.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/utils/progress.ts"],"sourcesContent":["/**\n * Progress Reporter for Trie Agent\n * \n * Provides real-time feedback to users as the agent works.\n * Uses console.error because MCP clients display stderr to users.\n */\n\n/**\n * Global interactive mode flag\n * When enabled, suppresses all console output (handled by InteractiveDashboard instead)\n */\nlet _interactiveMode = false;\n\n/**\n * Enable or disable interactive mode\n * When enabled, all console output from ProgressReporter and AgentProgressReporter is suppressed\n * \n * NOTE: This only sets the flag. The caller should verify that process.stdin.isTTY\n * and process.stdin.setRawMode are available before enabling interactive mode.\n */\nexport function setInteractiveMode(enabled: boolean): void {\n  _interactiveMode = enabled;\n}\n\n/**\n * Check if interactive mode is enabled\n */\nexport function isInteractiveMode(): boolean {\n  return _interactiveMode;\n}\n\nexport type ProgressPhase = \n  | 'init'\n  | 'discovery'\n  | 'reading'\n  | 'analyzing'\n  | 'ai-review'\n  | 'prioritizing'\n  | 'complete';\n\nexport interface ProgressCallback {\n  (phase: ProgressPhase, message: string, detail?: string): void;\n}\n\n/**\n * Progress Reporter - streams status updates to the user\n */\nexport class ProgressReporter {\n  private currentPhase: ProgressPhase = 'init';\n  private startTime: number = Date.now();\n  private phaseStartTime: number = Date.now();\n  private verbose: boolean;\n\n  constructor(options: { verbose?: boolean } = {}) {\n    this.verbose = options.verbose ?? true;\n  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console.error(`   [LOW] Found ${totalLow} low-severity issues (suppressed for brevity)`);\n    }\n\n    this.batchedIssues.clear();\n  }\n\n  complete(summary?: string): void {\n    // Flush any remaining batched issues\n    if (this.flushTimer) {\n      clearTimeout(this.flushTimer);\n      this.flushTimer = null;\n    }\n    this.flushBatchedIssues();\n\n    if (!this.verbose || _interactiveMode) return;\n\n    // Build a better summary\n    const severityCounts: string[] = [];\n    if (this.issuesBySeverity.get('critical')) {\n      severityCounts.push(`${this.issuesBySeverity.get('critical')} critical`);\n    }\n    if (this.issuesBySeverity.get('serious')) {\n      severityCounts.push(`${this.issuesBySeverity.get('serious')} serious`);\n    }\n    if (this.issuesBySeverity.get('moderate')) {\n      severityCounts.push(`${this.issuesBySeverity.get('moderate')} moderate`);\n    }\n    if (this.issuesBySeverity.get('low')) {\n      severityCounts.push(`${this.issuesBySeverity.get('low')} low`);\n    }\n\n    const severitySummary = severityCounts.length > 0 \n      ? ` (${severityCounts.join(', ')})`\n      : '';\n    \n    const msg = summary || `${this.issueCount} issues found${severitySummary}`;\n    console.error(`   Done: ${this.agentName}: ${msg}`);\n  }\n\n  getIssueCount(): number {\n    return this.issueCount;\n  }\n\n  getIssuesBySeverity(): Map<string, number> {\n    return new Map(this.issuesBySeverity);\n  }\n}\n\n/**\n * Global singleton for easy access\n */\nlet globalReporter: ProgressReporter | null = null;\n\nexport function getProgressReporter(options?: { verbose?: boolean }): ProgressReporter {\n  if (!globalReporter) {\n    globalReporter = new ProgressReporter(options);\n  }\n  return globalReporter;\n}\n\nexport function resetProgressReporter(): void {\n  globalReporter = 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package/dist/{chunk-FH335WL5.js → chunk-JYWGYUKX.js}

@@ -1,6 +1,6 @@
 import {
   getTrieDirectory
-} from "./chunk-SH7H3WRU.js";
+} from "./chunk-7F2R2ITA.js";
 
 // src/context/graph.ts
 import crypto from "crypto";
@@ -399,4 +399,4 @@ var ContextGraph = class {
 export {
   ContextGraph
 };
-//# sourceMappingURL=chunk-FH335WL5.js.map
+//# sourceMappingURL=chunk-JYWGYUKX.js.map

package/dist/{chunk-TIMIKBY2.js → chunk-KLMJKM63.js}

@@ -1,6 +1,6 @@
 import {
   isInteractiveMode
-} from "./chunk-APMV77PU.js";
+} from "./chunk-JKEEQAG2.js";
 
 // src/utils/output-manager.ts
 import pc from "picocolors";
@@ -563,4 +563,4 @@ export {
   output,
   resetOutputManager
 };
-//# sourceMappingURL=chunk-TIMIKBY2.js.map
+//# sourceMappingURL=chunk-KLMJKM63.js.map

package/dist/{chunk-4C67GV3O.js → chunk-KYKADM7P.js}

@@ -3,7 +3,7 @@ import {
 } from "./chunk-6NLHFIYA.js";
 import {
   getTrieDirectory
-} from "./chunk-SH7H3WRU.js";
+} from "./chunk-7F2R2ITA.js";
 
 // src/context/incident-index.ts
 import path2 from "path";
@@ -170,4 +170,4 @@ var IncidentIndex = class _IncidentIndex {
 export {
   IncidentIndex
 };
-//# sourceMappingURL=chunk-4C67GV3O.js.map
+//# sourceMappingURL=chunk-KYKADM7P.js.map

package/dist/{chunk-CU5VDH6F.js → chunk-L4FODDDB.js}

@@ -7,7 +7,7 @@ import {
 } from "./chunk-43X6JBEM.js";
 import {
   getTrieDirectory
-} from "./chunk-SH7H3WRU.js";
+} from "./chunk-7F2R2ITA.js";
 
 // src/agent/project-state.ts
 import { mkdir, readFile } from "fs/promises";
@@ -686,4 +686,4 @@ function getProjectState(projectPath) {
 export {
   getProjectState
 };
-//# sourceMappingURL=chunk-CU5VDH6F.js.map
+//# sourceMappingURL=chunk-L4FODDDB.js.map

package/dist/{chunk-ILGMFND2.js → chunk-LFNH3CSN.js}

@@ -1,13 +1,13 @@
 import {
   getInsightStore
-} from "./chunk-OTQEFXHU.js";
+} from "./chunk-T7UAH7GE.js";
 import {
   getProjectState
-} from "./chunk-CU5VDH6F.js";
+} from "./chunk-L4FODDDB.js";
 import {
   getMemoryStats,
   searchIssues
-} from "./chunk-QH77RQB3.js";
+} from "./chunk-4ZAFQEP6.js";
 
 // src/agent/goal-manager.ts
 import { basename } from "path";
@@ -648,4 +648,4 @@ export {
   getGoalManager,
   clearGoalManagers
 };
-//# sourceMappingURL=chunk-ILGMFND2.js.map
+//# sourceMappingURL=chunk-LFNH3CSN.js.map

package/dist/{chunk-GAL7OIYU.js → chunk-LJISDV3A.js}

@@ -1,38 +1,38 @@
 import {
   getGoalManager
-} from "./chunk-ILGMFND2.js";
+} from "./chunk-LFNH3CSN.js";
 import {
   getHypothesisEngine
-} from "./chunk-72KSLD7A.js";
+} from "./chunk-NVZZUUEU.js";
 import {
   getInsightStore
-} from "./chunk-OTQEFXHU.js";
+} from "./chunk-T7UAH7GE.js";
 import {
   GotchaPredictor,
   SlackIntegration,
   findCrossProjectPatterns,
   recordToGlobalMemory
-} from "./chunk-B2AHQ2IR.js";
-import {
-  getStorage
-} from "./chunk-FG467PDD.js";
+} from "./chunk-OWSGJUUR.js";
 import {
   ContextGraph
-} from "./chunk-FH335WL5.js";
+} from "./chunk-JYWGYUKX.js";
 import {
   isAIAvailable,
   runAIAnalysis
-} from "./chunk-FPEMP54L.js";
+} from "./chunk-UL337UDQ.js";
 import {
   getProjectState
-} from "./chunk-CU5VDH6F.js";
+} from "./chunk-L4FODDDB.js";
+import {
+  getStorage
+} from "./chunk-ALSCZ7WR.js";
 import {
   autoResolveIssues,
   getHistoricalInsights,
   getIssueHash,
   searchIssues,
   storeIssues
-} from "./chunk-QH77RQB3.js";
+} from "./chunk-4ZAFQEP6.js";
 
 // src/agent/trie-agent.ts
 import { basename as basename2 } from "path";
@@ -1322,9 +1322,9 @@ var TrieAgent = class {
     }
     if (issues.length >= 5 && this.canCreateInsight("pattern-discovery")) {
       try {
-        const { IncidentIndex } = await import("./incident-index-BWW2UEY7.js");
+        const { IncidentIndex } = await import("./incident-index-7CAXUNTL.js");
         const { TriePatternDiscovery } = await import("./pattern-discovery-F7LU5K6E.js");
-        const { ContextGraph: ContextGraph2 } = await import("./graph-J4OGTYCO.js");
+        const { ContextGraph: ContextGraph2 } = await import("./graph-JO7GG65P.js");
         const graph = new ContextGraph2(this.projectPath);
         const incidentIndex = await IncidentIndex.build(graph, this.projectPath);
         const discovery = new TriePatternDiscovery(graph, incidentIndex);
@@ -1581,7 +1581,7 @@ var TrieAgent = class {
     await this.projectState.recordScan();
     try {
       const riskLevel = issues.filter((i) => i.severity === "critical").length > 0 ? "critical" : issues.filter((i) => i.severity === "serious").length >= 3 ? "high" : issues.length > 10 ? "medium" : "low";
-      const { calculateAdaptiveScanFrequency } = await import("./goal-manager-IGUMDGCA.js");
+      const { calculateAdaptiveScanFrequency } = await import("./goal-manager-5QDITJKE.js");
       const result = await calculateAdaptiveScanFrequency(riskLevel);
       await this.projectState.setScanFrequency(result.frequencyMs);
     } catch {
@@ -1810,4 +1810,4 @@ export {
   TrieAgent,
   getTrieAgent
 };
-//# sourceMappingURL=chunk-GAL7OIYU.js.map
+//# sourceMappingURL=chunk-LJISDV3A.js.map

package/dist/{chunk-72KSLD7A.js → chunk-NVZZUUEU.js}

@@ -1,12 +1,12 @@
 import {
   getInsightStore
-} from "./chunk-OTQEFXHU.js";
+} from "./chunk-T7UAH7GE.js";
 import {
   getProjectState
-} from "./chunk-CU5VDH6F.js";
+} from "./chunk-L4FODDDB.js";
 import {
   searchIssues
-} from "./chunk-QH77RQB3.js";
+} from "./chunk-4ZAFQEP6.js";
 
 // src/agent/hypothesis.ts
 import { dirname } from "path";
@@ -134,7 +134,7 @@ var HypothesisEngine = class {
    * This enables fully agentic hypothesis creation based on actual codebase observations
    */
   async generateHypothesesWithAI(context) {
-    const { isAIAvailable, runAIAnalysis } = await import("./client-INNE2GGZ.js");
+    const { isAIAvailable, runAIAnalysis } = await import("./client-ZHOLZTRW.js");
     if (!isAIAvailable()) {
       return [];
     }
@@ -724,4 +724,4 @@ export {
   clearHypothesisEngines,
   gatherEvidenceForHypothesis
 };
-//# sourceMappingURL=chunk-72KSLD7A.js.map
+//# sourceMappingURL=chunk-NVZZUUEU.js.map