@timmeck/brain-core 2.26.0 → 2.28.0

package/dist/causal/engine.d.ts

@@ -25,6 +25,27 @@ export interface CausalAnalysis {
     roots: string[];
     leaves: string[];
     strongestChain: CausalPath | null;
+    interventionsCount: number;
+}
+export interface CausalIntervention {
+    id?: number;
+    cause: string;
+    effect: string;
+    interventionType: string;
+    expectedDirection: string;
+    actualDirection: string | null;
+    confounders: string[];
+    validated: boolean;
+    timestamp: string;
+}
+export interface StrengthEvolution {
+    cause: string;
+    effect: string;
+    dataPoints: Array<{
+        timestamp: string;
+        strength: number;
+        confidence: number;
+    }>;
 }
 export declare function runCausalMigration(db: Database.Database): void;
 /**
@@ -89,6 +110,32 @@ export declare class CausalGraph {
         first_seen: number;
         last_seen: number;
     }>;
+    /**
+     * Detect confounders for a cause→effect pair.
+     * A confounder is any node C where C→cause AND C→effect edges exist (shared parent).
+     */
+    detectConfounders(cause: string, effect: string): string[];
+    /**
+     * Track how the causal strength between two event types evolved over time.
+     * Splits recent events by day, runs Granger test on each day's subset.
+     */
+    trackStrengthEvolution(cause: string, effect: string, windowDays?: number): StrengthEvolution;
+    /**
+     * Validate a causal chain: checks if each consecutive pair still has a significant edge.
+     * Returns which links are weak or missing.
+     */
+    validateChain(chain: string[]): {
+        valid: boolean;
+        weakLinks: string[];
+    };
+    /**
+     * Record an intervention: a deliberate change to test a causal relationship.
+     * Confounders are auto-detected from the causal graph.
+     */
+    recordIntervention(cause: string, effect: string, expectedDirection: string, actualDirection: string | null): CausalIntervention;
+    /** Get recent intervention history. */
+    getInterventionHistory(limit?: number): CausalIntervention[];
+    private toIntervention;
     private getEventTypes;
     private getTimeRange;
     private upsertEdge;

package/dist/causal/engine.js

@@ -27,6 +27,19 @@ export function runCausalMigration(db) {
     CREATE INDEX IF NOT EXISTS idx_causal_events_type ON causal_events(type);
     CREATE INDEX IF NOT EXISTS idx_causal_events_timestamp ON causal_events(timestamp);
     CREATE INDEX IF NOT EXISTS idx_causal_edges_strength ON causal_edges(strength DESC);
+
+    CREATE TABLE IF NOT EXISTS causal_interventions (
+      id INTEGER PRIMARY KEY AUTOINCREMENT,
+      cause TEXT NOT NULL,
+      effect TEXT NOT NULL,
+      intervention_type TEXT NOT NULL DEFAULT 'manual',
+      expected_direction TEXT NOT NULL DEFAULT 'increase',
+      actual_direction TEXT DEFAULT NULL,
+      confounders TEXT NOT NULL DEFAULT '[]',
+      validated INTEGER NOT NULL DEFAULT 0,
+      timestamp TEXT DEFAULT (datetime('now'))
+    );
+    CREATE INDEX IF NOT EXISTS idx_causal_interventions_cause ON causal_interventions(cause, effect);
   `);
 }
 // ── Engine ───────────────────────────────────────────────
@@ -191,11 +204,13 @@ export class CausalGraph {
         const roots = this.findRoots(edges);
         const leaves = this.findLeaves(edges);
         const chains = this.findChains();
+        const interventionsCount = this.db.prepare('SELECT COUNT(*) as cnt FROM causal_interventions').get().cnt;
         return {
             edges,
             roots,
             leaves,
             strongestChain: chains.length > 0 ? chains[0] : null,
+            interventionsCount,
         };
     }
     /** Get event type statistics. */
@@ -209,7 +224,134 @@ export class CausalGraph {
       ORDER BY count DESC
     `).all();
     }
+    // ── Confounder & Intervention Methods ──────────────
+    /**
+     * Detect confounders for a cause→effect pair.
+     * A confounder is any node C where C→cause AND C→effect edges exist (shared parent).
+     */
+    detectConfounders(cause, effect) {
+        const rows = this.db.prepare(`
+      SELECT DISTINCT e1.cause AS confounder
+      FROM causal_edges e1
+      JOIN causal_edges e2 ON e1.cause = e2.cause
+      WHERE e1.effect = ? AND e2.effect = ? AND e1.cause != ? AND e1.cause != ?
+    `).all(cause, effect, cause, effect);
+        return rows.map(r => r.confounder);
+    }
+    /**
+     * Track how the causal strength between two event types evolved over time.
+     * Splits recent events by day, runs Granger test on each day's subset.
+     */
+    trackStrengthEvolution(cause, effect, windowDays = 7) {
+        const windowMs = windowDays * 24 * 60 * 60 * 1000;
+        const cutoff = Date.now() - windowMs;
+        const causeEvents = this.db.prepare('SELECT timestamp FROM causal_events WHERE type = ? AND timestamp >= ? ORDER BY timestamp').all(cause, cutoff);
+        const effectEvents = this.db.prepare('SELECT timestamp FROM causal_events WHERE type = ? AND timestamp >= ? ORDER BY timestamp').all(effect, cutoff);
+        // Group by day
+        const dayMs = 24 * 60 * 60 * 1000;
+        const dayBuckets = new Map();
+        for (const ev of causeEvents) {
+            const day = Math.floor(ev.timestamp / dayMs);
+            if (!dayBuckets.has(day))
+                dayBuckets.set(day, { causes: [], effects: [] });
+            dayBuckets.get(day).causes.push(ev);
+        }
+        for (const ev of effectEvents) {
+            const day = Math.floor(ev.timestamp / dayMs);
+            if (!dayBuckets.has(day))
+                dayBuckets.set(day, { causes: [], effects: [] });
+            dayBuckets.get(day).effects.push(ev);
+        }
+        const dataPoints = [];
+        const sortedDays = [...dayBuckets.keys()].sort((a, b) => a - b);
+        for (const day of sortedDays) {
+            const bucket = dayBuckets.get(day);
+            if (bucket.causes.length < 2 || bucket.effects.length < 2)
+                continue;
+            // Simple follow-count analysis per day
+            let followCount = 0;
+            for (const c of bucket.causes) {
+                for (const e of bucket.effects) {
+                    const lag = e.timestamp - c.timestamp;
+                    if (lag > 0 && lag <= this.maxWindowMs) {
+                        followCount++;
+                        break;
+                    }
+                    if (lag > this.maxWindowMs)
+                        break;
+                }
+            }
+            const strength = bucket.causes.length > 0 ? followCount / bucket.causes.length : 0;
+            const confidence = 1 - 1 / (1 + followCount / 5);
+            const ts = new Date(day * dayMs).toISOString();
+            dataPoints.push({ timestamp: ts, strength, confidence });
+        }
+        return { cause, effect, dataPoints };
+    }
+    /**
+     * Validate a causal chain: checks if each consecutive pair still has a significant edge.
+     * Returns which links are weak or missing.
+     */
+    validateChain(chain) {
+        const weakLinks = [];
+        for (let i = 0; i < chain.length - 1; i++) {
+            const from = chain[i];
+            const to = chain[i + 1];
+            const edge = this.db.prepare('SELECT strength, confidence FROM causal_edges WHERE cause = ? AND effect = ?').get(from, to);
+            if (!edge || edge.strength < 0.1 || edge.confidence < 0.3) {
+                weakLinks.push(`${from} → ${to}`);
+            }
+        }
+        return { valid: weakLinks.length === 0, weakLinks };
+    }
+    /**
+     * Record an intervention: a deliberate change to test a causal relationship.
+     * Confounders are auto-detected from the causal graph.
+     */
+    recordIntervention(cause, effect, expectedDirection, actualDirection) {
+        const confounders = this.detectConfounders(cause, effect);
+        const validated = actualDirection !== null && actualDirection === expectedDirection;
+        const result = this.db.prepare(`
+      INSERT INTO causal_interventions (cause, effect, intervention_type, expected_direction, actual_direction, confounders, validated)
+      VALUES (?, ?, 'manual', ?, ?, ?, ?)
+    `).run(cause, effect, expectedDirection, actualDirection, JSON.stringify(confounders), validated ? 1 : 0);
+        this.logger.info(`[CausalGraph] Intervention recorded: ${cause} → ${effect} (expected=${expectedDirection}, actual=${actualDirection})`);
+        return {
+            id: Number(result.lastInsertRowid),
+            cause,
+            effect,
+            interventionType: 'manual',
+            expectedDirection,
+            actualDirection,
+            confounders,
+            validated,
+            timestamp: new Date().toISOString(),
+        };
+    }
+    /** Get recent intervention history. */
+    getInterventionHistory(limit = 20) {
+        const rows = this.db.prepare('SELECT * FROM causal_interventions ORDER BY id DESC LIMIT ?').all(limit);
+        return rows.map(r => this.toIntervention(r));
+    }
     // ── Private helpers ─────────────────────────────────
+    toIntervention(row) {
+        let confounders = [];
+        try {
+            confounders = JSON.parse(row.confounders || '[]');
+        }
+        catch { /* ignore */ }
+        return {
+            id: row.id,
+            cause: row.cause,
+            effect: row.effect,
+            interventionType: row.intervention_type,
+            expectedDirection: row.expected_direction,
+            actualDirection: row.actual_direction ?? null,
+            confounders,
+            validated: row.validated === 1,
+            timestamp: row.timestamp,
+        };
+    }
     getEventTypes() {
         const rows = this.db.prepare('SELECT DISTINCT type FROM causal_events').all();
         return rows.map(r => r.type);

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package/dist/codegen/code-generator.d.ts

@@ -4,6 +4,14 @@ import type { ResearchJournal } from '../research/journal.js';
 import type { KnowledgeDistiller } from '../research/knowledge-distiller.js';
 import type { ThoughtStream } from '../consciousness/thought-stream.js';
 import type { CodeGeneratorConfig, GenerationRequest, GenerationResult, GenerationRecord, GenerationStatus, CodeGeneratorSummary } from './types.js';
+export interface SelfImprovementProposal {
+    id?: number;
+    engine: string;
+    problemDescription: string;
+    proposedChange: string;
+    status: 'proposed' | 'approved' | 'rejected' | 'implemented';
+    createdAt: string;
+}
 export declare function runCodeGeneratorMigration(db: Database.Database): void;
 export declare class CodeGenerator {
     private db;
@@ -37,6 +45,15 @@ export declare class CodeGenerator {
     list(status?: GenerationStatus, limit?: number): GenerationResult[];
     /** Get summary stats. */
     getSummary(): CodeGeneratorSummary;
+    /** Propose a self-improvement: tracks what could be changed, no auto-apply. */
+    proposeSelfImprovement(engine: string, problem: string, proposedChange: string): SelfImprovementProposal;
+    /** List self-improvement proposals, optionally filtered by status. */
+    listProposals(status?: string, limit?: number): SelfImprovementProposal[];
+    /** Approve a self-improvement proposal. */
+    approveProposal(id: number): SelfImprovementProposal | null;
+    /** Reject a self-improvement proposal. */
+    rejectProposal(id: number): SelfImprovementProposal | null;
+    private toProposal;
     private callClaudeApi;
     private cleanupRateLimit;
 }

package/dist/codegen/code-generator.js

@@ -25,6 +25,16 @@ export function runCodeGeneratorMigration(db) {
       completed_at TEXT,
       reviewed_at TEXT
     );
+
+    CREATE TABLE IF NOT EXISTS self_improvement_proposals (
+      id INTEGER PRIMARY KEY AUTOINCREMENT,
+      engine TEXT NOT NULL,
+      problem_description TEXT NOT NULL,
+      proposed_change TEXT NOT NULL,
+      status TEXT NOT NULL DEFAULT 'proposed',
+      created_at TEXT DEFAULT (datetime('now'))
+    );
+    CREATE INDEX IF NOT EXISTS idx_self_improvement_status ON self_improvement_proposals(status);
   `);
 }
 // ── CodeGenerator ────────────────────────────────────────
@@ -184,6 +194,57 @@ export class CodeGenerator {
             last_generation_at: last.t,
         };
     }
+    // ── Self-Improvement Proposals ──────────────────────────
+    /** Propose a self-improvement: tracks what could be changed, no auto-apply. */
+    proposeSelfImprovement(engine, problem, proposedChange) {
+        const result = this.db.prepare(`
+      INSERT INTO self_improvement_proposals (engine, problem_description, proposed_change, status)
+      VALUES (?, ?, ?, 'proposed')
+    `).run(engine, problem, proposedChange);
+        this.thoughtStream?.emit('code_generator', 'analyzing', `Self-improvement proposal: ${engine} — ${problem.substring(0, 60)}`, 'notable');
+        return {
+            id: Number(result.lastInsertRowid),
+            engine,
+            problemDescription: problem,
+            proposedChange: proposedChange,
+            status: 'proposed',
+            createdAt: new Date().toISOString(),
+        };
+    }
+    /** List self-improvement proposals, optionally filtered by status. */
+    listProposals(status, limit = 20) {
+        const rows = status
+            ? this.db.prepare('SELECT * FROM self_improvement_proposals WHERE status = ? ORDER BY id DESC LIMIT ?').all(status, limit)
+            : this.db.prepare('SELECT * FROM self_improvement_proposals ORDER BY id DESC LIMIT ?').all(limit);
+        return rows.map(r => this.toProposal(r));
+    }
+    /** Approve a self-improvement proposal. */
+    approveProposal(id) {
+        this.db.prepare('UPDATE self_improvement_proposals SET status = ? WHERE id = ?').run('approved', id);
+        const row = this.db.prepare('SELECT * FROM self_improvement_proposals WHERE id = ?').get(id);
+        if (!row)
+            return null;
+        this.thoughtStream?.emit('code_generator', 'discovering', `Self-improvement #${id} approved`, 'notable');
+        return this.toProposal(row);
+    }
+    /** Reject a self-improvement proposal. */
+    rejectProposal(id) {
+        this.db.prepare('UPDATE self_improvement_proposals SET status = ? WHERE id = ?').run('rejected', id);
+        const row = this.db.prepare('SELECT * FROM self_improvement_proposals WHERE id = ?').get(id);
+        if (!row)
+            return null;
+        return this.toProposal(row);
+    }
+    toProposal(row) {
+        return {
+            id: row.id,
+            engine: row.engine,
+            problemDescription: row.problem_description,
+            proposedChange: row.proposed_change,
+            status: row.status,
+            createdAt: row.created_at,
+        };
+    }
     // ── Private ──────────────────────────────────────────────
     async callClaudeApi(systemPrompt, userMessage) {
         // Use raw fetch to Anthropic API — avoids @anthropic-ai/sdk dependency

package/dist/codegen/code-generator.js.map

@@ -1 +1 @@
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package/dist/codegen/index.d.ts

@@ -2,6 +2,7 @@ export { CodeMiner, runCodeMinerMigration } from './code-miner.js';
 export { PatternExtractor, runPatternExtractorMigration } from './pattern-extractor.js';
 export { ContextBuilder } from './context-builder.js';
 export { CodeGenerator, runCodeGeneratorMigration } from './code-generator.js';
+export type { SelfImprovementProposal } from './code-generator.js';
 export { CodegenServer } from './codegen-server.js';
 export type { CodegenServerOptions } from './codegen-server.js';
 export type { CodeMinerConfig, RepoContent, CodeMinerSummary, ExtractedPattern, DependencyPattern, TechStack, ProjectStructure, ReadmePattern, ContextBuilderConfig, BuiltContext, CodeGeneratorConfig, GenerationTrigger, GenerationStatus, GenerationRequest, GenerationResult, GenerationRecord, CodeGeneratorSummary, } from './types.js';

package/dist/codegen/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/codegen/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,qBAAqB,EAAE,MAAM,iBAAiB,CAAC;AACnE,OAAO,EAAE,gBAAgB,EAAE,4BAA4B,EAAE,MAAM,wBAAwB,CAAC;AACxF,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,yBAAyB,EAAE,MAAM,qBAAqB,CAAC;AAC/E,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/codegen/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,qBAAqB,EAAE,MAAM,iBAAiB,CAAC;AACnE,OAAO,EAAE,gBAAgB,EAAE,4BAA4B,EAAE,MAAM,wBAAwB,CAAC;AACxF,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,yBAAyB,EAAE,MAAM,qBAAqB,CAAC;AAE/E,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC"}

package/dist/curiosity/curiosity-engine.d.ts

@@ -66,6 +66,17 @@ export interface BanditArm {
     ucbScore: number;
     lastPulled: number | null;
 }
+export interface BlindSpot {
+    id?: number;
+    topic: string;
+    hypothesisCount: number;
+    predictionCount: number;
+    journalCount: number;
+    experimentCount: number;
+    severity: number;
+    detectedAt: string;
+    resolvedAt: string | null;
+}
 export interface CuriosityStatus {
     totalGaps: number;
     activeGaps: number;
@@ -75,6 +86,8 @@ export interface CuriosityStatus {
     explorationRate: number;
     topGaps: KnowledgeGap[];
     topArms: BanditArm[];
+    blindSpots: number;
+    topBlindSpots: BlindSpot[];
     uptime: number;
 }
 export interface ExplorationDecision {
@@ -106,6 +119,11 @@ export declare class CuriosityEngine {
     private readonly stmtGetExplorations;
     private readonly stmtGetTopicStats;
     private readonly stmtTotalExplorations;
+    private readonly stmtInsertBlindSpot;
+    private readonly stmtUpdateBlindSpot;
+    private readonly stmtGetBlindSpots;
+    private readonly stmtResolveBlindSpot;
+    private readonly stmtBlindSpotCount;
     constructor(db: Database.Database, config: CuriosityEngineConfig);
     setThoughtStream(stream: ThoughtStream): void;
     setDataSources(sources: CuriosityDataSources): void;
@@ -147,6 +165,16 @@ export declare class CuriosityEngine {
         actual: string;
         deviation: number;
     }>;
+    /**
+     * Detect blind spots: topics that exist across attention/journal/hypotheses/experiments
+     * but have very low coverage in one or more of those dimensions.
+     * severity = 1 - avg(normalized counts). Topics with severity > 0.7 are blind spots.
+     */
+    detectBlindSpots(): BlindSpot[];
+    /** Get unresolved blind spots sorted by severity. */
+    getBlindSpots(limit?: number): BlindSpot[];
+    /** Mark a blind spot as resolved. */
+    resolveBlindSpot(id: number): boolean;
     getGaps(limit?: number): KnowledgeGap[];
     getGap(id: number): KnowledgeGap | null;
     getQuestions(limit?: number): CuriosityQuestion[];
@@ -167,4 +195,5 @@ export declare class CuriosityEngine {
     private suggestActions;
     private toGap;
     private toQuestion;
+    private toBlindSpot;
 }