@teselagen/ove 0.5.11 → 0.5.13

package/Reflex/ReflexSplitter.d.ts

@@ -0,0 +1,33 @@
+export default class ReflexSplitter extends React.Component<any, any, any> {
+    static propTypes: {
+        children: PropTypes.Requireable<NonNullable<PropTypes.ReactNodeLike>>;
+        onStartResize: PropTypes.Requireable<(...args: any[]) => any>;
+        onStopResize: PropTypes.Requireable<(...args: any[]) => any>;
+        className: PropTypes.Requireable<string>;
+        propagate: PropTypes.Requireable<boolean>;
+        onResize: PropTypes.Requireable<(...args: any[]) => any>;
+        style: PropTypes.Requireable<object>;
+    };
+    static defaultProps: {
+        document: Document | null;
+        onStartResize: null;
+        onStopResize: null;
+        propagate: boolean;
+        onResize: null;
+        className: string;
+        style: {};
+    };
+    constructor(props: any);
+    state: {
+        active: boolean;
+    };
+    onMouseMove(event: any): void;
+    onMouseDown(event: any): void;
+    onMouseUp(event: any): void;
+    document: any;
+    componentDidMount(): void;
+    componentWillUnmount(): void;
+    render(): import('../../../../node_modules/react/jsx-runtime').JSX.Element;
+}
+import React from '../../../../node_modules/react';
+import PropTypes from "prop-types";

package/Reflex/index.d.ts

@@ -0,0 +1,4 @@
+import ReflexContainer from "./ReflexContainer";
+import ReflexSplitter from "./ReflexSplitter";
+import ReflexElement from "./ReflexElement";
+export { ReflexContainer, ReflexSplitter, ReflexElement };

package/RowItem/AnnotationContainerHolder.d.ts

@@ -0,0 +1,2 @@
+export default AnnotationContainerHolder;
+declare function AnnotationContainerHolder(props: any): import('../../../../node_modules/react/jsx-runtime').JSX.Element;

package/RowItem/AnnotationPositioner.d.ts

@@ -0,0 +1,7 @@
+export default AnnotationPositioner;
+declare class AnnotationPositioner extends React.PureComponent<any, any, any> {
+    constructor(props: any);
+    constructor(props: any, context: any);
+    render(): import('../../../../node_modules/react/jsx-runtime').JSX.Element;
+}
+import React from '../../../../node_modules/react';

package/RowItem/Axis.d.ts

@@ -0,0 +1,2 @@
+declare function _default(props: any): import('../../../../node_modules/react/jsx-runtime').JSX.Element | null;
+export default _default;

package/RowItem/Caret/index.d.ts

@@ -0,0 +1,2 @@
+export default Caret;
+declare function Caret(props: any): import('../../../../../node_modules/react/jsx-runtime').JSX.Element | null;

package/RowItem/Chromatograms/Chromatogram.d.ts

@@ -0,0 +1 @@
+export default function Chromatogram(props: any): import('../../../../../node_modules/react/jsx-runtime').JSX.Element;

package/RowItem/CutsiteSelectionLayers.d.ts

@@ -0,0 +1,4 @@
+export const CutsiteSelectionLayers: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+import React from '../../../../node_modules/react';

package/RowItem/Cutsites.d.ts

@@ -0,0 +1,2 @@
+declare const _default: any;
+export default _default;

package/RowItem/DeletionLayers/index.d.ts

@@ -0,0 +1,2 @@
+declare const _default: any;
+export default _default;

package/RowItem/Labels.d.ts

@@ -0,0 +1,2 @@
+declare const _default: any;
+export default _default;

package/RowItem/Orf.d.ts

@@ -0,0 +1,2 @@
+export default Orf;
+declare function Orf(props: any): import('../../../../node_modules/react/jsx-runtime').JSX.Element;

package/RowItem/Orfs.d.ts

@@ -0,0 +1,2 @@
+export default Orfs;
+declare function Orfs(props: any): import('../../../../node_modules/react/jsx-runtime').JSX.Element;

package/RowItem/SelectionLayer/index.d.ts

@@ -0,0 +1,2 @@
+declare const _default: any;
+export default _default;

package/RowItem/Sequence.d.ts

@@ -0,0 +1,8 @@
+declare const _default: typeof Sequence;
+export default _default;
+declare class Sequence extends React.Component<any, any, any> {
+    constructor(props: any);
+    constructor(props: any, context: any);
+    render(): import('../../../../node_modules/react/jsx-runtime').JSX.Element;
+}
+import React from '../../../../node_modules/react';

package/RowItem/StackedAnnotations/PointedAnnotation.d.ts

@@ -0,0 +1,2 @@
+declare const _default: (props: any) => import('../../../../../node_modules/react/jsx-runtime').JSX.Element;
+export default _default;

package/RowItem/StackedAnnotations/getStructuredBases.d.ts

@@ -0,0 +1,17 @@
+export function getStructuredBases({ annotationRange, forward, bases, start, end, fullSequence, primerBindsOn, sequenceLength }: {
+    annotationRange: any;
+    forward: any;
+    bases?: string | undefined;
+    start: any;
+    end: any;
+    fullSequence: any;
+    primerBindsOn: any;
+    sequenceLength: any;
+}): {
+    aRange: {
+        start: number;
+        end: number;
+    };
+    basesNoInserts: string;
+    inserts: never[];
+};

package/RowItem/StackedAnnotations/index.d.ts

@@ -0,0 +1,2 @@
+export default StackedAnnotations;
+declare function StackedAnnotations(props: any): import('../../../../../node_modules/react/jsx-runtime').JSX.Element | null;

package/RowItem/StackedAnnotations/primerBases.d.ts

@@ -0,0 +1,10 @@
+export function getBasesToShow({ hidePrimerBases, annotation, annotationRange, charWidth, bpsPerRow, fullSequence, iTree, sequenceLength }: {
+    hidePrimerBases: any;
+    annotation: any;
+    annotationRange: any;
+    charWidth: any;
+    bpsPerRow: any;
+    fullSequence: any;
+    iTree: any;
+    sequenceLength: any;
+}): {};

package/RowItem/Translations/AASliver.d.ts

@@ -0,0 +1,2 @@
+declare const _default: any;
+export default _default;

package/RowItem/Translations/Translation.d.ts

@@ -0,0 +1,2 @@
+declare const _default: any;
+export default _default;

package/RowItem/Translations/index.d.ts

@@ -0,0 +1,2 @@
+export default Translations;
+declare function Translations(props: any): import('../../../../../node_modules/react/jsx-runtime').JSX.Element;

package/RowItem/constants.d.ts

@@ -0,0 +1,3 @@
+export const ANNOTATION_LABEL_FONT_WIDTH: 10;
+export const realCharWidth: 8;
+export const fudge2: 3;

package/RowItem/getCutsiteLabelHeights.d.ts

@@ -0,0 +1,8 @@
+export default function getCutsiteLabelHeights({ bpsPerRow, charWidth, annotationRanges, annotationHeight, spaceBetweenAnnotations, textWidth }: {
+    bpsPerRow: any;
+    charWidth: any;
+    annotationRanges: any;
+    annotationHeight: any;
+    spaceBetweenAnnotations: any;
+    textWidth: any;
+}): number;

package/RowItem/getXStartAndWidthFromNonCircularRange.d.ts

@@ -0,0 +1,4 @@
+export default function getXStartAndWidthFromNonCircularRange(range: any, charWidth: any): {
+    width: number;
+    xStart: number;
+};

package/RowItem/getXStartAndWidthOfRangeWrtRow.d.ts

@@ -0,0 +1,11 @@
+export default function getXStartAndWidthOfRangeWrtRow({ range, row, charWidth, sequenceLength, gapsBefore, gapsInside }: {
+    range: any;
+    row: any;
+    charWidth: any;
+    sequenceLength: any;
+    gapsBefore?: number | undefined;
+    gapsInside?: number | undefined;
+}): {
+    xStart: number;
+    width: number;
+};

package/RowItem/getXStartAndWidthOfRowAnnotation.d.ts

@@ -0,0 +1,6 @@
+export default function getXStartAndWidthOfRowAnnotation(range: any, bpsPerRow: any, charWidth: any, gapsBefore?: number, gapsInside?: number): {
+    startOffset: number;
+    xStart: number;
+    width: number;
+};
+export function getWidth(range: any, charWidth: any, gapsInside?: number): number;

package/RowItem/index.d.ts

@@ -0,0 +1 @@
+export default function RowItem(props: any): import('../../../../node_modules/react/jsx-runtime').JSX.Element | null;

package/RowItem/partOverhangs.d.ts

@@ -0,0 +1 @@
+export const partOverhangs: string[];

package/RowItem/utils.d.ts

@@ -0,0 +1,4 @@
+export function doesLabelFitInAnnotation(text: string | undefined, { range, width }: {
+    range: any;
+    width: any;
+}, charWidth: any): boolean;

package/RowView/estimateRowHeight.d.ts

@@ -0,0 +1,6 @@
+export namespace rowHeights {
+    import primaryProteinSequence = rowHeights.translations;
+    export { primaryProteinSequence };
+}
+declare function _default(props: any): any;
+export default _default;

package/RowView/index.d.ts

@@ -0,0 +1,10 @@
+import React from '../../../../node_modules/react';
+export interface RowViewProps {
+  editorName: string; //the name of the editor instance (this should match what you've set up in your redux store)
+  height: number; //default = 400
+  width: number;
+  marginWidth: number;
+  charWidth: number;
+  RowItemProps: object; //props passed to RowItem
+}
+export default class RowView extends React.Component<RowViewProps> {}

package/SimpleCircularOrLinearView.d.ts

@@ -0,0 +1,2 @@
+declare function _default(props: any): import('../../../node_modules/react/jsx-runtime').JSX.Element;
+export default _default;

package/SimpleOligoPreview.d.ts

@@ -0,0 +1,7 @@
+export function SimpleOligoPreview({ className, width, height, sequenceData, showTitle }: {
+    className: any;
+    width: any;
+    height: any;
+    sequenceData: any;
+    showTitle: any;
+}): import('../../../node_modules/react/jsx-runtime').JSX.Element;

package/StatusBar/MeltingTemp.d.ts

@@ -0,0 +1,5 @@
+export default function MeltingTemp({ sequence, WrapperToUse, InnerWrapper }: {
+    sequence: any;
+    WrapperToUse?: ((p: any) => import('../../../../node_modules/react/jsx-runtime').JSX.Element) | undefined;
+    InnerWrapper?: ((p: any) => import('../../../../node_modules/react/jsx-runtime').JSX.Element) | undefined;
+}): import('../../../../node_modules/react/jsx-runtime').JSX.Element;

package/StatusBar/index.d.ts

@@ -0,0 +1,15 @@
+export function StatusBar({ disableSetReadOnly, onSave, editorName, showCircularity, showMoleculeType, showReadOnly, showAvailability, showGCContentByDefault, onSelectionOrCaretChanged, GCDecimalDigits, isProtein, beforeReadOnlyChange }: {
+    disableSetReadOnly: any;
+    onSave: any;
+    editorName: any;
+    showCircularity?: boolean | undefined;
+    showMoleculeType?: boolean | undefined;
+    showReadOnly?: boolean | undefined;
+    showAvailability?: boolean | undefined;
+    showGCContentByDefault: any;
+    onSelectionOrCaretChanged: any;
+    GCDecimalDigits?: number | undefined;
+    isProtein: any;
+    beforeReadOnlyChange: any;
+}): import('../../../../node_modules/react/jsx-runtime').JSX.Element;
+export default StatusBar;

package/ToolBar/ToolbarItem.d.ts

@@ -0,0 +1,14 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<typeof ToolbarItem, {
+    [x: string]: any;
+}>;
+export default _default;
+declare class ToolbarItem extends React.Component<any, any, any> {
+    constructor(props: any);
+    constructor(props: any, context: any);
+    toggleDropdown: ({ forceClose }?: {
+        forceClose: any;
+    }) => void;
+    render(): import('../../../../node_modules/react/jsx-runtime').JSX.Element | null;
+    dropdownNode: HTMLDivElement | undefined;
+}
+import React from '../../../../node_modules/react';

package/ToolBar/alignmentTool.d.ts

@@ -0,0 +1,6 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+export const AlignmentToolDialog: any;
+import React from '../../../../node_modules/react';

package/ToolBar/array_move.d.ts

@@ -0,0 +1 @@
+export function array_move(arr: any, old_index: any, new_index: any): any;

package/ToolBar/cutsiteTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/downloadTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/editTool.d.ts

@@ -0,0 +1,10 @@
+export function handleReadOnlyChange(newVal: any, { beforeReadOnlyChange, updateReadOnlyMode, setIsLoading }: {
+    beforeReadOnlyChange: any;
+    updateReadOnlyMode: any;
+    setIsLoading?: (() => void) | undefined;
+}): Promise<void>;
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/featureTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/findTool.d.ts

@@ -0,0 +1,2 @@
+export default inlineFindTool;
+import inlineFindTool from "./inlineFindTool";

package/ToolBar/importTool.d.ts

@@ -0,0 +1,2 @@
+declare const _default: any;
+export default _default;

package/ToolBar/index.d.ts

@@ -0,0 +1,2 @@
+export function ToolBar(props: any): import('../../../../node_modules/react/jsx-runtime').JSX.Element;
+export const defaultToolList: string[];

package/ToolBar/inlineFindTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/oligoTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/orfTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/partTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/printTool.d.ts

@@ -0,0 +1,6 @@
+declare function _default(): {
+    Icon: import('../../../../node_modules/react/jsx-runtime').JSX.Element;
+    onIconClick: () => void;
+    tooltip: string;
+};
+export default _default;

package/ToolBar/redoTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/saveTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/undoTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/versionHistoryTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/ToolBar/visibilityTool.d.ts

@@ -0,0 +1,5 @@
+declare const _default: import('../../../../node_modules/react-redux').ConnectedComponent<React.ComponentType<import('../../../../node_modules/react-redux').Matching<any, unknown>>, {
+    [x: string]: any;
+}>;
+export default _default;
+import React from '../../../../node_modules/react';

package/VersionHistoryView/index.d.ts

@@ -0,0 +1,23 @@
+export class VersionHistoryView extends React.Component<any, any, any> {
+    constructor(props: any);
+    constructor(props: any, context: any);
+    state: {
+        selectedVersion: undefined;
+        versionList: {
+            dateChanged: string;
+            id: string;
+        }[];
+    };
+    updateSeqData: (sequenceData: any) => void;
+    activeSeqData: any;
+    componentDidMount: () => Promise<void>;
+    getCurrentSeqData: () => Promise<any>;
+    onRowSelect: ([row]: [any]) => Promise<void>;
+    _getVersionList: () => Promise<void>;
+    revertToSelectedVersion: () => void;
+    goBack: () => void;
+    render(): import('../../../../node_modules/react/jsx-runtime').JSX.Element;
+}
+declare const _default: any;
+export default _default;
+import React from '../../../../node_modules/react';

package/addAlignment.d.ts

@@ -0,0 +1 @@
+export default function addAlignment(store: any, alignment?: {}): void;

package/commands/getOveHotkeyDefs.d.ts

@@ -0,0 +1,4 @@
+export default function getOveHotkeyDefs({ store, editorName }: {
+    store: any;
+    editorName: any;
+}): {};