@teselagen/ove 0.3.49 → 0.3.51

package/index.cjs.js

@@ -18375,25 +18375,16 @@ var toString$6 = {}.toString;
 var _cof = /* @__PURE__ */ __name(function(it) {
   return toString$6.call(it).slice(8, -1);
 }, "_cof");
-var _iobject;
-var hasRequired_iobject;
-function require_iobject() {
-  if (hasRequired_iobject)
-    return _iobject;
-  hasRequired_iobject = 1;
-  var cof2 = _cof;
-  _iobject = Object("z").propertyIsEnumerable(0) ? Object : function(it) {
-    return cof2(it) == "String" ? it.split("") : Object(it);
-  };
-  return _iobject;
-}
-__name(require_iobject, "require_iobject");
+var cof$2 = _cof;
+var _iobject = Object("z").propertyIsEnumerable(0) ? Object : function(it) {
+  return cof$2(it) == "String" ? it.split("") : Object(it);
+};
 var _defined = /* @__PURE__ */ __name(function(it) {
   if (it == void 0)
     throw TypeError("Can't call method on  " + it);
   return it;
 }, "_defined");
-var IObject = require_iobject();
+var IObject = _iobject;
 var defined$2 = _defined;
 var _toIobject = /* @__PURE__ */ __name(function(it) {
   return IObject(defined$2(it));
@@ -18482,23 +18473,15 @@ var _objectKeysInternal = /* @__PURE__ */ __name(function(object3, names2) {
   return result;
 }, "_objectKeysInternal");
 var _enumBugKeys = "constructor,hasOwnProperty,isPrototypeOf,propertyIsEnumerable,toLocaleString,toString,valueOf".split(",");
-var $keys$2 = _objectKeysInternal;
+var $keys$3 = _objectKeysInternal;
 var enumBugKeys$1 = _enumBugKeys;
 var _objectKeys = Object.keys || /* @__PURE__ */ __name(function keys(O2) {
-  return $keys$2(O2, enumBugKeys$1);
+  return $keys$3(O2, enumBugKeys$1);
 }, "keys");
 var _objectGops = {};
 _objectGops.f = Object.getOwnPropertySymbols;
 var _objectPie = {};
-var hasRequired_objectPie;
-function require_objectPie() {
-  if (hasRequired_objectPie)
-    return _objectPie;
-  hasRequired_objectPie = 1;
-  _objectPie.f = {}.propertyIsEnumerable;
-  return _objectPie;
-}
-__name(require_objectPie, "require_objectPie");
+_objectPie.f = {}.propertyIsEnumerable;
 var defined$1 = _defined;
 var _toObject = /* @__PURE__ */ __name(function(it) {
   return Object(defined$1(it));
@@ -18512,9 +18495,9 @@ function require_objectAssign() {
   var DESCRIPTORS2 = _descriptors;
   var getKeys2 = _objectKeys;
   var gOPS2 = _objectGops;
-  var pIE2 = require_objectPie();
+  var pIE2 = _objectPie;
   var toObject2 = _toObject;
-  var IObject2 = require_iobject();
+  var IObject2 = _iobject;
   var $assign = Object.assign;
   _objectAssign = !$assign || _fails(function() {
     var A2 = {};
@@ -19149,7 +19132,7 @@ var _wksDefine = /* @__PURE__ */ __name(function(name2) {
 }, "_wksDefine");
 var getKeys = _objectKeys;
 var gOPS$1 = _objectGops;
-var pIE$1 = require_objectPie();
+var pIE$1 = _objectPie;
 var _enumKeys = /* @__PURE__ */ __name(function(it) {
   var result = getKeys(it);
   var getSymbols2 = gOPS$1.f;
@@ -19170,21 +19153,13 @@ var _isArray = Array.isArray || /* @__PURE__ */ __name(function isArray(arg) {
 }, "isArray");
 var _objectGopnExt = {};
 var _objectGopn = {};
-var hasRequired_objectGopn;
-function require_objectGopn() {
-  if (hasRequired_objectGopn)
-    return _objectGopn;
-  hasRequired_objectGopn = 1;
-  var $keys2 = _objectKeysInternal;
-  var hiddenKeys = _enumBugKeys.concat("length", "prototype");
-  _objectGopn.f = Object.getOwnPropertyNames || /* @__PURE__ */ __name(function getOwnPropertyNames4(O2) {
-    return $keys2(O2, hiddenKeys);
-  }, "getOwnPropertyNames");
-  return _objectGopn;
-}
-__name(require_objectGopn, "require_objectGopn");
+var $keys$2 = _objectKeysInternal;
+var hiddenKeys = _enumBugKeys.concat("length", "prototype");
+_objectGopn.f = Object.getOwnPropertyNames || /* @__PURE__ */ __name(function getOwnPropertyNames(O2) {
+  return $keys$2(O2, hiddenKeys);
+}, "getOwnPropertyNames");
 var toIObject$2 = _toIobject;
-var gOPN$1 = require_objectGopn().f;
+var gOPN$1 = _objectGopn.f;
 var toString$5 = {}.toString;
 var windowNames = typeof window == "object" && window && Object.getOwnPropertyNames ? Object.getOwnPropertyNames(window) : [];
 var getWindowNames = /* @__PURE__ */ __name(function(it) {
@@ -19194,11 +19169,11 @@ var getWindowNames = /* @__PURE__ */ __name(function(it) {
     return windowNames.slice();
   }
 }, "getWindowNames");
-_objectGopnExt.f = /* @__PURE__ */ __name(function getOwnPropertyNames(it) {
+_objectGopnExt.f = /* @__PURE__ */ __name(function getOwnPropertyNames2(it) {
   return windowNames && toString$5.call(it) == "[object Window]" ? getWindowNames(it) : gOPN$1(toIObject$2(it));
 }, "getOwnPropertyNames");
 var _objectGopd = {};
-var pIE = require_objectPie();
+var pIE = _objectPie;
 var createDesc$1 = _propertyDesc;
 var toIObject$1 = _toIobject;
 var toPrimitive$1 = _toPrimitive$1;
@@ -19333,7 +19308,7 @@ var $getOwnPropertyDescriptor = /* @__PURE__ */ __name(function getOwnPropertyDe
     D2.enumerable = true;
   return D2;
 }, "getOwnPropertyDescriptor");
-var $getOwnPropertyNames = /* @__PURE__ */ __name(function getOwnPropertyNames2(it) {
+var $getOwnPropertyNames = /* @__PURE__ */ __name(function getOwnPropertyNames3(it) {
   var names2 = gOPN(toIObject(it));
   var result = [];
   var i = 0;
@@ -19377,8 +19352,8 @@ if (!USE_NATIVE) {
   }, "toString"));
   $GOPD.f = $getOwnPropertyDescriptor;
   $DP.f = $defineProperty$1;
-  require_objectGopn().f = gOPNExt.f = $getOwnPropertyNames;
-  require_objectPie().f = $propertyIsEnumerable;
+  _objectGopn.f = gOPNExt.f = $getOwnPropertyNames;
+  _objectPie.f = $propertyIsEnumerable;
   $GOPS.f = $getOwnPropertySymbols;
   if (DESCRIPTORS && !_library) {
     redefine(ObjectProto, "propertyIsEnumerable", $propertyIsEnumerable);
@@ -40017,6 +39992,13 @@ const popoverOverflowModifiers = {
 const _TgSelect = class _TgSelect extends React$2.Component {
   constructor(props) {
     super(props);
+    __publicField(this, "setOpenState", /* @__PURE__ */ __name((isOpen) => {
+      const { handleOpenChange } = this.props;
+      if (handleOpenChange) {
+        handleOpenChange(isOpen);
+      }
+      this.setState({ isOpen });
+    }, "setOpenState"));
     __publicField(this, "itemRenderer", /* @__PURE__ */ __name((i, { index: index2, handleClick, modifiers: modifiers2 }) => {
       const optionRenderer = this.getOptionRenderer();
       const onClick = i.onClick || handleClick;
@@ -40049,7 +40031,7 @@ const _TgSelect = class _TgSelect extends React$2.Component {
       if (multi) {
         let valArray = getValueArray(value);
         if (closeOnSelect || item.closeOnSelect) {
-          this.setState({ isOpen: false });
+          this.setOpenState(false);
           this.input && this.input.blur();
         }
         if (isTagSelect && item.value && item.value.includes && item.value.includes(":")) {
@@ -40066,7 +40048,7 @@ const _TgSelect = class _TgSelect extends React$2.Component {
         }
         return onChange([...valArray, item]);
       } else {
-        this.setState({ isOpen: false });
+        this.setOpenState(false);
         this.input && this.input.blur();
         return onChange(item);
       }
@@ -40079,7 +40061,7 @@ const _TgSelect = class _TgSelect extends React$2.Component {
       );
       e2.stopPropagation();
       onChange(filteredVals);
-      this.setState({ isOpen: false });
+      this.setOpenState(false);
       this.input.focus();
     }, "handleTagRemove"));
     __publicField(this, "handleTagInputRemove", /* @__PURE__ */ __name((val2, index2) => {
@@ -40100,7 +40082,7 @@ const _TgSelect = class _TgSelect extends React$2.Component {
       const { onChange } = this.props;
       this.setState({ query: "" });
       onChange(newValue);
-      this.setState({ isOpen: false });
+      this.setOpenState(false);
       this.input.focus();
     }, "handleClear"));
     __publicField(this, "itemListPredicate", /* @__PURE__ */ __name((queryString2, item) => {
@@ -40123,9 +40105,12 @@ const _TgSelect = class _TgSelect extends React$2.Component {
     }, "handleActiveItemChange"));
     __publicField(this, "onInteraction", /* @__PURE__ */ __name(() => {
       if (this.input != null && this.input !== document.activeElement) {
-        this.setState({ isOpen: false, query: "" });
+        this.setOpenState(false);
+        this.setState({
+          query: ""
+        });
       } else if (!this.props.openOnKeyDown) {
-        this.setState({ isOpen: true });
+        this.setOpenState(true);
       }
     }, "onInteraction"));
     __publicField(this, "queryHasExactOptionMatch", /* @__PURE__ */ __name(() => {
@@ -40234,7 +40219,7 @@ const _TgSelect = class _TgSelect extends React$2.Component {
         onClick: (e2) => {
           if (this.state.isOpen) {
             e2.stopPropagation();
-            this.setState({ isOpen: false });
+            this.setOpenState(false);
           }
         },
         disabled,
@@ -40307,11 +40292,11 @@ const _TgSelect = class _TgSelect extends React$2.Component {
               if (this.input != null) {
                 this.input.blur();
               }
-              this.setState({ isOpen: false });
+              this.setOpenState(false);
               e2.preventDefault();
               e2.stopPropagation();
             } else if (!(which === core$5.Keys.BACKSPACE || which === core$5.Keys.ARROW_LEFT || which === core$5.Keys.ARROW_RIGHT)) {
-              this.setState({ isOpen: true });
+              this.setOpenState(true);
             }
           },
           inputProps: __spreadValues({
@@ -55193,7 +55178,7 @@ var KNOWN_STATICS = {
   arity: true
 };
 var defineProperty$3 = Object.defineProperty;
-var getOwnPropertyNames3 = Object.getOwnPropertyNames;
+var getOwnPropertyNames4 = Object.getOwnPropertyNames;
 var getOwnPropertySymbols3 = Object.getOwnPropertySymbols;
 var getOwnPropertyDescriptor3 = Object.getOwnPropertyDescriptor;
 var getPrototypeOf = Object.getPrototypeOf;
@@ -55206,7 +55191,7 @@ function hoistNonReactStatics(targetComponent, sourceComponent, blacklist) {
         hoistNonReactStatics(targetComponent, inheritedComponent, blacklist);
       }
     }
-    var keys5 = getOwnPropertyNames3(sourceComponent);
+    var keys5 = getOwnPropertyNames4(sourceComponent);
     if (getOwnPropertySymbols3) {
       keys5 = keys5.concat(getOwnPropertySymbols3(sourceComponent));
     }
@@ -56435,13 +56420,24 @@ const _DataTable = class _DataTable extends React$2.Component {
         }, 0);
       }
     }, "updateFromProps"));
-    __publicField(this, "formatAndValidateEntities", /* @__PURE__ */ __name((entities) => {
+    __publicField(this, "formatAndValidateEntities", /* @__PURE__ */ __name((entities, { useDefaultValues, indexToStartAt } = {}) => {
       const { schema: schema2 } = this.props;
       const editableFields = schema2.fields.filter((f2) => !f2.isNotEditable);
       const validationErrors = {};
       const newEnts = immer(entities, (entities2) => {
         entities2.forEach((e2, index2) => {
           editableFields.forEach((columnSchema) => {
+            if (useDefaultValues) {
+              if (e2[columnSchema.path] === void 0) {
+                if (lodashExports.isFunction(columnSchema.defaultValue)) {
+                  e2[columnSchema.path] = columnSchema.defaultValue(
+                    index2 + indexToStartAt,
+                    e2
+                  );
+                } else
+                  e2[columnSchema.path] = columnSchema.defaultValue;
+              }
+            }
             const { error } = editCellHelper({
               entity: e2,
               columnSchema,
@@ -56765,8 +56761,9 @@ const _DataTable = class _DataTable extends React$2.Component {
     }, "handleCut"));
     __publicField(this, "getCellCopyText", /* @__PURE__ */ __name((cellWrapper) => {
       const text2 = cellWrapper && cellWrapper.getAttribute("data-copy-text");
+      const jsonText = cellWrapper && cellWrapper.getAttribute("data-copy-json");
       const toRet = text2 || cellWrapper.textContent || "";
-      return toRet;
+      return [toRet, jsonText];
     }, "getCellCopyText"));
     __publicField(this, "handleCopyRow", /* @__PURE__ */ __name((rowEl) => {
       const text2 = this.getRowCopyText(rowEl);
@@ -56774,13 +56771,26 @@ const _DataTable = class _DataTable extends React$2.Component {
         return window.toastr.warning("No text to copy");
       this.handleCopyHelper(text2, "Row Copied");
     }, "handleCopyRow"));
-    __publicField(this, "handleCopyColumn", /* @__PURE__ */ __name((e2, cellWrapper) => {
+    __publicField(this, "handleCopyColumn", /* @__PURE__ */ __name((e2, cellWrapper, selectedRecords) => {
       const cellType = cellWrapper.getAttribute("data-test");
-      const allRowEls = getAllRows(e2);
-      if (!allRowEls)
+      let rowElsToCopy = getAllRows(e2);
+      if (!rowElsToCopy)
+        return;
+      if (selectedRecords) {
+        const ids = selectedRecords.map((e22) => {
+          var _a2;
+          return (_a2 = getIdOrCodeOrIndex(e22)) == null ? void 0 : _a2.toString();
+        });
+        rowElsToCopy = Array.from(rowElsToCopy).filter((rowEl) => {
+          var _a2;
+          const id2 = (_a2 = rowEl.closest(".rt-tr-group")) == null ? void 0 : _a2.getAttribute("data-test-id");
+          return id2 !== void 0 && ids.includes(id2);
+        });
+      }
+      if (!rowElsToCopy)
         return;
       const textToCopy = lodashExports.map(
-        allRowEls,
+        rowElsToCopy,
         (rowEl) => this.getRowCopyText(rowEl, { cellType })
       ).filter((text2) => text2).join("\n");
       if (!textToCopy)
@@ -56821,9 +56831,10 @@ const _DataTable = class _DataTable extends React$2.Component {
         return this.getCellCopyText(cellChild);
       }).join("	");
     }, "getRowCopyText"));
-    __publicField(this, "handleCopyHelper", /* @__PURE__ */ __name((stringToCopy, message) => {
+    __publicField(this, "handleCopyHelper", /* @__PURE__ */ __name((stringToCopy, objToCopy, message) => {
       const copyHandler = /* @__PURE__ */ __name((e2) => {
         e2.preventDefault();
+        e2.clipboardData.setData("application/json", JSON.stringify(objToCopy));
         e2.clipboardData.setData("text/plain", stringToCopy);
       }, "copyHandler");
       document.addEventListener("copy", copyHandler);
@@ -57685,6 +57696,22 @@ const _DataTable = class _DataTable extends React$2.Component {
             noEllipsis = true;
           } else {
             if (reduxFormEditingCell === cellId) {
+              if (column.type === "genericSelect") {
+                const GenericSelectComp = column.GenericSelectComp;
+                return /* @__PURE__ */ React$2.createElement(
+                  GenericSelectComp,
+                  __spreadProps(__spreadValues({
+                    rowId,
+                    initialValue: text2
+                  }, dataTest), {
+                    finishEdit: (newVal2, doNotStopEditing) => {
+                      this.finishCellEdit(cellId, newVal2, doNotStopEditing);
+                    },
+                    dataTest,
+                    cancelEdit: this.cancelCellEdit
+                  })
+                );
+              }
               if (column.type === "dropdown" || column.type === "dropdownMulti") {
                 return /* @__PURE__ */ React$2.createElement(
                   DropdownCell,
@@ -57745,7 +57772,7 @@ const _DataTable = class _DataTable extends React$2.Component {
               title: title || void 0
             }),
             val2
-          ), isCellEditable && (column.type === "dropdown" || column.type === "dropdownMulti") && /* @__PURE__ */ React$2.createElement(
+          ), isCellEditable && (column.type === "dropdown" || column.type === "dropdownMulti" || column.type === "genericSelect") && /* @__PURE__ */ React$2.createElement(
             core$5.Icon,
             {
               icon: "caret-down",
@@ -57888,7 +57915,7 @@ const _DataTable = class _DataTable extends React$2.Component {
                     const cellNumStr2 = getNumberStrAtEnd(cellVal);
                     const cellNum2 = Number(cellNumStr2);
                     const cellTextNoNum = stripNumberAtEnd(cellVal);
-                    if (cellNumStr2.startsWith("0")) {
+                    if (cellNumStr2 == null ? void 0 : cellNumStr2.startsWith("0")) {
                       maybePad = cellNumStr2.length;
                     }
                     if (cellTextNoNum && !prefix2) {
@@ -58035,16 +58062,19 @@ const _DataTable = class _DataTable extends React$2.Component {
           return getIdOrCodeOrIndex(e2, i) === rowId;
         });
         const insertIndex = above ? indexToInsert : indexToInsert + 1;
-        let { newEnts, validationErrors } = this.formatAndValidateEntities(newEntities);
+        const insertIndexToUse = appendToBottom ? entities2.length : insertIndex;
+        let { newEnts, validationErrors } = this.formatAndValidateEntities(
+          newEntities,
+          {
+            useDefaultValues: true,
+            indexToStartAt: insertIndexToUse
+          }
+        );
         newEnts = newEnts.map((e2) => __spreadProps(__spreadValues({}, e2), {
           _isClean: true
         }));
         this.updateValidation(entities2, __spreadValues(__spreadValues({}, reduxFormCellValidation), validationErrors));
-        entities2.splice(
-          appendToBottom ? entities2.length : insertIndex,
-          0,
-          ...newEnts
-        );
+        entities2.splice(insertIndexToUse, 0, ...newEnts);
       });
       this.refocusTable();
     }, "insertRows"));
@@ -58085,8 +58115,8 @@ const _DataTable = class _DataTable extends React$2.Component {
               {
                 key: "copyCell",
                 onClick: () => {
-                  const text2 = this.getCellCopyText(cellWrapper);
-                  this.handleCopyHelper(text2, "Cell copied");
+                  const [text2, jsonText] = this.getCellCopyText(cellWrapper);
+                  this.handleCopyHelper(text2, jsonText, "Cell copied");
                 },
                 text: "Cell"
               }
@@ -58104,6 +58134,20 @@ const _DataTable = class _DataTable extends React$2.Component {
               }
             )
           );
+          if (selectedRecords.length > 1) {
+            copyMenuItems.push(
+              /* @__PURE__ */ React$2.createElement(
+                core$5.MenuItem,
+                {
+                  key: "copyColumnSelected",
+                  onClick: () => {
+                    this.handleCopyColumn(e2, cellWrapper, selectedRecords);
+                  },
+                  text: "Column (Selected)"
+                }
+              )
+            );
+          }
         }
         if (selectedRecords.length === 0 || selectedRecords.length === 1) {
           const cell = e2.target.querySelector(".tg-cell-wrapper") || e2.target.closest(".tg-cell-wrapper") || e2.target.closest(".rt-td");
@@ -59357,7 +59401,8 @@ function getNumberStrAtEnd(str) {
 }
 __name(getNumberStrAtEnd, "getNumberStrAtEnd");
 function stripNumberAtEnd(str) {
-  return str.replace(getNumberStrAtEnd(str), "");
+  var _a2;
+  return (_a2 = str == null ? void 0 : str.replace) == null ? void 0 : _a2.call(str, getNumberStrAtEnd(str), "");
 }
 __name(stripNumberAtEnd, "stripNumberAtEnd");
 function isEntityClean(e2) {
@@ -61733,7 +61778,7 @@ const PreviewCsvData = observer(function(props) {
   } = props;
   const rerenderKey = React$2.useRef(0);
   rerenderKey.current = rerenderKey.current + 1;
-  const data = userSchema.userData && userSchema.userData.length && userSchema.userData.map((row) => {
+  const data = userSchema.userData && userSchema.userData.length && userSchema.userData.map((row, i) => {
     const toRet = {
       _isClean: row._isClean
     };
@@ -61746,7 +61791,10 @@ const PreviewCsvData = observer(function(props) {
       }
       if (toRet[path2] === void 0 || toRet[path2] === "") {
         if (defaultValue2) {
-          toRet[path2] = defaultValue2;
+          if (lodashExports.isFunction(defaultValue2)) {
+            toRet[path2] = defaultValue2(i, row);
+          } else
+            toRet[path2] = defaultValue2;
         } else {
           toRet[path2] = "";
         }
@@ -71506,6 +71554,7 @@ function UploaderInner({
   overflowList,
   autoUnzip,
   disabled,
+  noBuildCsvOption,
   initializeForm,
   showFilesCount,
   threeDotMenuItems,
@@ -71684,12 +71733,14 @@ function UploaderInner({
               subtext: "Includes Upload Instructions and Column Info",
               exampleFile: handleDownloadXlsxFile
             },
-            {
-              description: manualEnterMessage,
-              subtext: manualEnterSubMessage,
-              icon: "manually-entered-data",
-              exampleFile: handleManuallyEnterData
-            }
+            ...noBuildCsvOption ? [] : [
+              {
+                description: manualEnterMessage,
+                subtext: manualEnterSubMessage,
+                icon: "manually-entered-data",
+                exampleFile: handleManuallyEnterData
+              }
+            ]
           ];
           delete a2.exampleFile;
         }
@@ -72138,7 +72189,7 @@ function UploaderInner({
             },
             innerIcon || /* @__PURE__ */ React$2.createElement(core$5.Icon, { icon: "upload", iconSize: minimal ? 15 : 30 }),
             innerText || (minimal ? "Upload" : "Click or drag to upload"),
-            validateAgainstSchema && /* @__PURE__ */ React$2.createElement(
+            validateAgainstSchema && !noBuildCsvOption && /* @__PURE__ */ React$2.createElement(
               "div",
               {
                 style: {
@@ -77910,7 +77961,7 @@ const minimumOrfSize$1 = /* @__PURE__ */ Object.freeze(/* @__PURE__ */ Object.de
 }, Symbol.toStringTag, { value: "Module" }));
 const protein_letters = "ACDEFGHIKLMNPQRSTVWY";
 const protein_letters_withUandX = "ACDEFGHIKLMNPQRSTVWYUX";
-const extended_protein_letters = "ACDEFGHIKLMNPQRSTVWYBXZJUO*";
+const extended_protein_letters = "ACDEFGHIKLMNPQRSTVWYBXZJUO";
 const ambiguous_dna_letters = "GATCRYWSMKHBVDN";
 const unambiguous_dna_letters = "GATC";
 const ambiguous_rna_letters = "GAUCRYWSMKHBVDN";
@@ -77966,7 +78017,7 @@ const extended_protein_values = {
   Y: "Y",
   Z: "QE",
   "*": "\\*\\.",
-  ".": "\\.\\.",
+  ".": "\\.",
   "-": "\\-"
 };
 const bioData = /* @__PURE__ */ Object.freeze(/* @__PURE__ */ Object.defineProperty({
@@ -84073,9 +84124,12 @@ function getReplaceChars({
   isRna: isRna2,
   isMixedRnaAndDna
 } = {}) {
-  return isProtein2 ? {} : isOligo2 ? {} : isRna2 ? { t: "u" } : isMixedRnaAndDna ? {} : (
-    //just plain old dna
-    {}
+  return isProtein2 ? {} : (
+    // {".": "*"}
+    isOligo2 ? {} : isRna2 ? { t: "u" } : isMixedRnaAndDna ? {} : (
+      //just plain old dna
+      {}
+    )
   );
 }
 __name(getReplaceChars, "getReplaceChars");
@@ -84811,7 +84865,9 @@ function arrayRotate(arr, count2) {
 }
 __name(arrayRotate, "arrayRotate");
 function rotateSequenceDataToPosition(sequenceData2, caretPosition2, options) {
-  const newSequenceData = tidyUpSequenceData(sequenceData2, options);
+  const newSequenceData = tidyUpSequenceData(sequenceData2, __spreadValues({
+    doNotRemoveInvalidChars: true
+  }, options));
   newSequenceData.sequence = rotateBpsToPosition(
     newSequenceData.sequence,
     caretPosition2
@@ -84848,7 +84904,7 @@ function adjustAnnotationsToInsert(annotationsToBeAdjusted, insertStart, insertL
 __name(adjustAnnotationsToInsert, "adjustAnnotationsToInsert");
 function insertSequenceDataAtPositionOrRange(_sequenceDataToInsert, _existingSequenceData, caretPositionOrRange, options = {}) {
   const { maintainOriginSplit } = options;
-  let existingSequenceData = tidyUpSequenceData(_existingSequenceData, options);
+  let existingSequenceData = tidyUpSequenceData(_existingSequenceData, __spreadValues({ doNotRemoveInvalidChars: true }, options));
   const sequenceDataToInsert = tidyUpSequenceData(
     _sequenceDataToInsert,
     options
@@ -84866,6 +84922,7 @@ function insertSequenceDataAtPositionOrRange(_sequenceDataToInsert, _existingSeq
         return acc[type] = [];
       }, {})), {
         sequence: "",
+        doNotRemoveInvalidChars: true,
         proteinSequence: "",
         chromatogramData: void 0
       }),
@@ -92896,7 +92953,7 @@ function getSequenceDataBetweenRange(seqData, range2, options = {}) {
   if (!range2)
     return seqData;
   const { exclude = {}, excludePartial = {} } = options;
-  const seqDataToUse = tidyUpSequenceData(seqData, options);
+  const seqDataToUse = tidyUpSequenceData(seqData, __spreadValues({ doNotRemoveInvalidChars: true }, options));
   annotationTypes.forEach((type) => {
     delete seqDataToUse[`filtered${lodashExports.startCase(type)}`];
   });
@@ -92947,9 +93004,9 @@ function getSequenceDataBetweenRange(seqData, range2, options = {}) {
         }
       });
     });
-    return tidyUpSequenceData(toRet, options);
+    return tidyUpSequenceData(toRet, __spreadValues({ doNotRemoveInvalidChars: true }, options));
   }
-  return tidyUpSequenceData(seqDataToReturn, options);
+  return tidyUpSequenceData(seqDataToReturn, __spreadValues({ doNotRemoveInvalidChars: true }, options));
 }
 __name(getSequenceDataBetweenRange, "getSequenceDataBetweenRange");
 function getAnnotationsBetweenRange(annotationsToBeAdjusted, range2, maxLength, shouldExcludePartial) {
@@ -92996,7 +93053,7 @@ function getComplementSequenceAndAnnotations(pSeqObj, options = {}) {
   const newSeqObj = Object.assign({}, seqObj, {
     sequence: getComplementSequenceString(seqObj.sequence, seqObj.isRna)
   });
-  return tidyUpSequenceData(newSeqObj, options);
+  return tidyUpSequenceData(newSeqObj, __spreadValues({ doNotRemoveInvalidChars: true }, options));
 }
 __name(getComplementSequenceAndAnnotations, "getComplementSequenceAndAnnotations");
 function getCutsiteType(restrictionEnzyme) {
@@ -93044,7 +93101,7 @@ __name(getReverseComplementAnnotation, "getReverseComplementAnnotation");
 function getReverseComplementSequenceAndAnnoations(pSeqObj, options = {}) {
   const seqObj = tidyUpSequenceData(
     getSequenceDataBetweenRange(pSeqObj, options.range),
-    options
+    __spreadValues({ doNotRemoveInvalidChars: true }, options)
   );
   const newSeqObj = Object.assign(
     {},
@@ -93064,7 +93121,9 @@ function getReverseComplementSequenceAndAnnoations(pSeqObj, options = {}) {
       return acc;
     }, {})
   );
-  return tidyUpSequenceData(newSeqObj, options);
+  return tidyUpSequenceData(newSeqObj, __spreadValues({
+    doNotRemoveInvalidChars: true
+  }, options));
 }
 __name(getReverseComplementSequenceAndAnnoations, "getReverseComplementSequenceAndAnnoations");
 function guessIfSequenceIsDnaAndNotProtein(seq, options = {}) {
@@ -94010,6 +94069,30 @@ function flattenSequenceArray(parsingResultArray, opts2) {
   return parsingResultArray;
 }
 __name(flattenSequenceArray, "flattenSequenceArray");
+function parseFeatureLocation(locStr, isProtein2, inclusive1BasedStart, inclusive1BasedEnd) {
+  locStr = locStr.trim();
+  const locArr = [];
+  locStr.replace(/(\d+)/g, function(string2, match2) {
+    locArr.push(match2);
+  });
+  const locArray = [];
+  for (let i = 0; i < locArr.length; i += 2) {
+    const start2 = parseInt(locArr[i], 10) - (inclusive1BasedStart ? 0 : 1);
+    let end2 = parseInt(locArr[i + 1], 10) - (inclusive1BasedEnd ? 0 : 1);
+    if (isNaN(end2)) {
+      end2 = start2;
+    }
+    const location2 = {
+      start: start2,
+      end: end2
+    };
+    locArray.push(
+      isProtein2 ? convertAACaretPositionOrRangeToDna(location2) : location2
+    );
+  }
+  return locArray;
+}
+__name(parseFeatureLocation, "parseFeatureLocation");
 function genbankToJson(string2, options = {}) {
   const {
     inclusive1BasedStart,
@@ -94334,7 +94417,15 @@ function genbankToJson(string2, options = {}) {
     }
     if (isFeatureLineRunon(line, featureLocationIndentation)) {
       if (lastLineWasLocation) {
-        parseFeatureLocation(line.trim(), options);
+        const feat = getCurrentFeature();
+        feat.locations = feat.locations.concat(
+          parseFeatureLocation(
+            line.trim(),
+            options.isProtein,
+            inclusive1BasedStart,
+            inclusive1BasedEnd
+          )
+        );
         lastLineWasLocation = true;
       } else {
         if (currentFeatureNote) {
@@ -94360,7 +94451,14 @@ function genbankToJson(string2, options = {}) {
         const feat = getCurrentFeature();
         feat.type = key;
         feat.strand = strand;
-        parseFeatureLocation(val2, options);
+        feat.locations = feat.locations.concat(
+          parseFeatureLocation(
+            val2,
+            options.isProtein,
+            inclusive1BasedStart,
+            inclusive1BasedEnd
+          )
+        );
         lastLineWasLocation = true;
       }
     }
@@ -94383,29 +94481,6 @@ function genbankToJson(string2, options = {}) {
     return qual;
   }
   __name(isNote, "isNote");
-  function parseFeatureLocation(locStr, options2) {
-    locStr = locStr.trim();
-    const locArr = [];
-    locStr.replace(/(\d+)/g, function(string22, match2) {
-      locArr.push(match2);
-    });
-    for (let i = 0; i < locArr.length; i += 2) {
-      const start2 = parseInt(locArr[i], 10) - (inclusive1BasedStart ? 0 : 1);
-      let end2 = parseInt(locArr[i + 1], 10) - (inclusive1BasedEnd ? 0 : 1);
-      if (isNaN(end2)) {
-        end2 = start2;
-      }
-      const location2 = {
-        start: start2,
-        end: end2
-      };
-      const feat = getCurrentFeature();
-      feat.locations.push(
-        options2.isProtein ? convertAACaretPositionOrRangeToDna(location2) : location2
-      );
-    }
-  }
-  __name(parseFeatureLocation, "parseFeatureLocation");
   function parseFeatureNote(line) {
     let newLine;
     newLine = line.trimLeft();
@@ -106659,7 +106734,9 @@ function addHighlightedDifferences(alignmentTracks) {
     if (track2.isUnmapped) {
       return track2;
     }
-    const sequenceData2 = tidyUpSequenceData(track2.sequenceData);
+    const sequenceData2 = tidyUpSequenceData(track2.sequenceData, {
+      doNotRemoveInvalidChars: true
+    });
     const matchHighlightRanges = getRangeMatchesBetweenTemplateAndNonTemplate(
       alignmentTracks[0].alignmentData.sequence,
       track2.alignmentData.sequence
@@ -106719,7 +106796,9 @@ const alignments = /* @__PURE__ */ __name((state2 = {}, { payload = {}, type })
       const templateSeq = payloadToUse.pairwiseAlignments[0][0];
       const pairwiseOverviewAlignmentTracks = [
         __spreadProps(__spreadValues({}, templateSeq), {
-          sequenceData: tidyUpSequenceData(templateSeq.sequenceData),
+          sequenceData: tidyUpSequenceData(templateSeq.sequenceData, {
+            doNotRemoveInvalidChars: true
+          }),
           alignmentData: { sequence: templateSeq.sequenceData.sequence }
           //remove the gaps from the template sequence
         })
@@ -106748,7 +106827,9 @@ const alignments = /* @__PURE__ */ __name((state2 = {}, { payload = {}, type })
           }));
         }
         const alignedSeqMinusInserts = __spreadProps(__spreadValues({}, alignedSeq), {
-          sequenceData: __spreadProps(__spreadValues({}, tidyUpSequenceData(alignedSeq.sequenceData)), {
+          sequenceData: __spreadProps(__spreadValues({}, tidyUpSequenceData(alignedSeq.sequenceData, {
+            doNotRemoveInvalidChars: true
+          })), {
             sequence: template.sequenceData.sequence
           }),
           additionalSelectionLayers,
@@ -110700,7 +110781,7 @@ const handleSave = /* @__PURE__ */ __name((props) => (..._0) => __async(exports,
   }
   const promiseOrVal = (!readOnly2 || alwaysAllowSave || opts2.isSaveAs) && saveHandler && saveHandler(
     opts2,
-    tidyUpSequenceData(sequenceData2, { annotationsAsObjects: true }),
+    tidyUpSequenceData(sequenceData2, { doNotRemoveInvalidChars: true, annotationsAsObjects: true }),
     props,
     updateLastSavedIdToCurrent
   );
@@ -111300,7 +111381,7 @@ function jsonToJson(incomingJson) {
   return JSON.stringify(
     lodashExports.omit(
       cleanUpTeselagenJsonForExport(
-        tidyUpSequenceData(incomingJson, { annotationsAsObjects: false })
+        tidyUpSequenceData(incomingJson, { doNotRemoveInvalidChars: true, annotationsAsObjects: false })
       ),
       [
         "sequenceFragments",
@@ -125783,7 +125864,7 @@ function showFileDialog({ multiple = false, onSelect }) {
 }
 __name(showFileDialog, "showFileDialog");
 const name = "@teselagen/ove";
-const version = "0.3.48";
+const version = "0.3.50";
 const main = "./src/index.js";
 const exports$1 = {
   ".": {
@@ -130519,7 +130600,7 @@ function VectorInteractionHOC(Component) {
               }
             }
           ),
-          { annotationsAsObjects: true }
+          { doNotRemoveInvalidChars: true, annotationsAsObjects: true }
         );
         if (!(this.sequenceDataToCopy || {}).textToCopy && !seqData.sequence.length)
           return window.toastr.warning(
@@ -130535,7 +130616,7 @@ function VectorInteractionHOC(Component) {
           this.handleDnaDelete(false);
           onCut(
             e2,
-            tidyUpSequenceData(seqData, { annotationsAsObjects: true }),
+            tidyUpSequenceData(seqData, { doNotRemoveInvalidChars: true, annotationsAsObjects: true }),
             this.props
           );
           document.body.removeEventListener("cut", this.handleCut);