@teselagen/ove 0.0.13 → 0.0.15

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (362) hide show
  1. package/index.umd.js +164751 -135808
  2. package/package.json +78 -2
  3. package/src/AlignmentTool/index.js +16 -0
  4. package/src/AlignmentView/AlignmentVisibilityTool.js +105 -0
  5. package/src/AlignmentView/EditTrackNameDialog.js +34 -0
  6. package/src/AlignmentView/HorizontalPanelDragHandle.js +35 -0
  7. package/src/AlignmentView/Minimap.js +520 -0
  8. package/src/AlignmentView/Mismatches.js +134 -0
  9. package/src/AlignmentView/PairwiseAlignmentView.js +68 -0
  10. package/src/AlignmentView/PerformantSelectionLayer.js +32 -0
  11. package/src/AlignmentView/coerceInitialValue.js +7 -0
  12. package/src/AlignmentView/getGapMap.js +12 -0
  13. package/src/AlignmentView/getGaps.js +27 -0
  14. package/src/AlignmentView/getPairwiseOverviewLinearViewOptions.js +38 -0
  15. package/src/AlignmentView/getTrackFromEvent.js +25 -0
  16. package/src/AlignmentView/index.js +2058 -0
  17. package/src/AlignmentView/isTargetWithinEl.js +6 -0
  18. package/src/AlignmentView/style.css +100 -0
  19. package/src/AlignmentView/updateTrackHelper.js +58 -0
  20. package/src/AutoAnnotate.js +500 -0
  21. package/src/AutoAnnotateBpMatchingDialog.js +208 -0
  22. package/src/CircularView/Axis.js +40 -0
  23. package/src/CircularView/AxisNumbers.js +35 -0
  24. package/src/CircularView/Caret.js +63 -0
  25. package/src/CircularView/CircularDnaSequence.js +73 -0
  26. package/src/CircularView/CircularZoomMinimap.js +16 -0
  27. package/src/CircularView/Cutsite.js +18 -0
  28. package/src/CircularView/Cutsites.js +113 -0
  29. package/src/CircularView/DeletionLayer.js +28 -0
  30. package/src/CircularView/Feature.js +83 -0
  31. package/src/CircularView/Labels/index.js +536 -0
  32. package/src/CircularView/Labels/relaxLabelAngles.js +157 -0
  33. package/src/CircularView/Labels/relaxLabels_DEPRECATED.js +105 -0
  34. package/src/CircularView/Labels/style.css +55 -0
  35. package/src/CircularView/Orf.js +25 -0
  36. package/src/CircularView/Part.js +34 -0
  37. package/src/CircularView/PositionAnnotationOnCircle.js +26 -0
  38. package/src/CircularView/Primer.js +41 -0
  39. package/src/CircularView/RotateCircularViewSlider.js +82 -0
  40. package/src/CircularView/SelectionLayer.js +132 -0
  41. package/src/CircularView/VeTopRightContainer.js +12 -0
  42. package/src/CircularView/ZoomCircularViewSlider.js +62 -0
  43. package/src/CircularView/drawAnnotations.js +433 -0
  44. package/src/CircularView/drawDirectedPiePiece.js +142 -0
  45. package/src/CircularView/getAngleForPositionMidpoint.js +3 -0
  46. package/src/CircularView/getInternalLabel.js +40 -0
  47. package/src/CircularView/getRangeAnglesSpecial.js +12 -0
  48. package/src/CircularView/getYOffset.js +15 -0
  49. package/src/CircularView/index.d.ts +20 -0
  50. package/src/CircularView/index.js +930 -0
  51. package/src/CircularView/normalizeAngle.js +3 -0
  52. package/src/CircularView/normalizeAngleRange.js +9 -0
  53. package/src/CircularView/positionCutsites.js +6 -0
  54. package/src/CircularView/shouldFlipText.js +4 -0
  55. package/src/CircularView/style.css +47 -0
  56. package/src/CircularView/utils/polarToSpecialCartesian.js +7 -0
  57. package/src/CreateAnnotationsPage.js +96 -0
  58. package/src/CreateCustomEnzyme/index.js +337 -0
  59. package/src/CreateCustomEnzyme/style.css +100 -0
  60. package/src/CutsiteFilter/AdditionalCutsiteInfoDialog.js +599 -0
  61. package/src/CutsiteFilter/index.js +408 -0
  62. package/src/CutsiteFilter/style.css +23 -0
  63. package/src/CutsiteFilter/withRestrictionEnzymes.js +15 -0
  64. package/src/DigestTool/AddLaddersDialog.js +82 -0
  65. package/src/DigestTool/DigestTool.js +223 -0
  66. package/src/DigestTool/Ladder.css +20 -0
  67. package/src/DigestTool/Ladder.js +303 -0
  68. package/src/DigestTool/createFragmentLines.js +120 -0
  69. package/src/DigestTool/ladderDefaults.js +26 -0
  70. package/src/DigestTool/ruler.css +89 -0
  71. package/src/Editor/CommandHotkeyHandler.js +44 -0
  72. package/src/Editor/DropHandler.css +21 -0
  73. package/src/Editor/DropHandler.js +64 -0
  74. package/src/Editor/FillWindow.js +46 -0
  75. package/src/Editor/darkmode.css +98 -0
  76. package/src/Editor/index.js +1005 -0
  77. package/src/Editor/style.css +235 -0
  78. package/src/Editor/userDefinedHandlersAndOpts.js +56 -0
  79. package/src/EnzymeViewer/index.js +81 -0
  80. package/src/EnzymeViewer/style.css +6 -0
  81. package/src/FindBar/index.js +411 -0
  82. package/src/FindBar/style.css +46 -0
  83. package/src/GlobalDialog.js +66 -0
  84. package/src/GlobalDialogUtils.js +85 -0
  85. package/src/LinearView/SequenceName.js +15 -0
  86. package/src/LinearView/ZoomLinearView.js +47 -0
  87. package/src/LinearView/index.js +374 -0
  88. package/src/LinearView/style.css +12 -0
  89. package/src/ManageEnzymes/index.js +326 -0
  90. package/src/ManageEnzymes/style.css +100 -0
  91. package/src/MenuBar/defaultConfig.js +149 -0
  92. package/src/MenuBar/index.js +98 -0
  93. package/src/MenuBar/viewSubmenu.js +479 -0
  94. package/src/PCRTool/PCRTool.js +173 -0
  95. package/src/Reflex/Browser.js +107 -0
  96. package/src/Reflex/ReflexContainer.js +802 -0
  97. package/src/Reflex/ReflexElement.js +160 -0
  98. package/src/Reflex/ReflexEvents.js +77 -0
  99. package/src/Reflex/ReflexSplitter.js +205 -0
  100. package/src/Reflex/index.js +5 -0
  101. package/src/Reflex/reflex-styles.css +128 -0
  102. package/src/Reflex/reflex-styles.css.map +9 -0
  103. package/src/RowItem/AnnotationContainerHolder.js +20 -0
  104. package/src/RowItem/AnnotationPositioner.js +27 -0
  105. package/src/RowItem/Axis.js +149 -0
  106. package/src/RowItem/Caret/index.js +64 -0
  107. package/src/RowItem/Caret/style.css +8 -0
  108. package/src/RowItem/Chromatograms/Chromatogram.js +289 -0
  109. package/src/RowItem/CutsiteSelectionLayers.js +47 -0
  110. package/src/RowItem/Cutsites.js +271 -0
  111. package/src/RowItem/DeletionLayers/index.js +113 -0
  112. package/src/RowItem/DeletionLayers/style.css +5 -0
  113. package/src/RowItem/Labels.js +327 -0
  114. package/src/RowItem/Orf.js +109 -0
  115. package/src/RowItem/Orfs.js +35 -0
  116. package/src/RowItem/ReplacementLayers/style.css +5 -0
  117. package/src/RowItem/SelectionLayer/index.js +184 -0
  118. package/src/RowItem/SelectionLayer/style.css +21 -0
  119. package/src/RowItem/Sequence.js +269 -0
  120. package/src/RowItem/StackedAnnotations/PointedAnnotation.js +347 -0
  121. package/src/RowItem/StackedAnnotations/getStructuredBases.js +97 -0
  122. package/src/RowItem/StackedAnnotations/index.js +182 -0
  123. package/src/RowItem/StackedAnnotations/primerBases.js +218 -0
  124. package/src/RowItem/StackedAnnotations/style.css +14 -0
  125. package/src/RowItem/Translations/AASliver.js +190 -0
  126. package/src/RowItem/Translations/Translation.js +162 -0
  127. package/src/RowItem/Translations/index.js +54 -0
  128. package/src/RowItem/Translations/style.css +3 -0
  129. package/src/RowItem/constants.js +3 -0
  130. package/src/RowItem/getCutsiteLabelHeights.js +56 -0
  131. package/src/RowItem/getXStartAndWidthFromNonCircularRange.js +12 -0
  132. package/src/RowItem/getXStartAndWidthOfRangeWrtRow.js +27 -0
  133. package/src/RowItem/getXStartAndWidthOfRowAnnotation.js +19 -0
  134. package/src/RowItem/index.js +647 -0
  135. package/src/RowItem/partOverhangs.js +6 -0
  136. package/src/RowItem/style.css +103 -0
  137. package/src/RowItem/utils.js +32 -0
  138. package/src/RowView/estimateRowHeight.js +184 -0
  139. package/src/RowView/index.d.ts +10 -0
  140. package/src/RowView/index.js +554 -0
  141. package/src/RowView/style.css +12 -0
  142. package/src/SimpleCircularOrLinearView.js +379 -0
  143. package/src/SimpleOligoPreview.js +39 -0
  144. package/src/StatusBar/MeltingTemp.js +81 -0
  145. package/src/StatusBar/index.js +275 -0
  146. package/src/StatusBar/style.css +38 -0
  147. package/src/ToolBar/ToolbarItem.js +194 -0
  148. package/src/ToolBar/alignmentTool.js +503 -0
  149. package/src/ToolBar/array_move.js +10 -0
  150. package/src/ToolBar/cutsiteTool.js +88 -0
  151. package/src/ToolBar/downloadTool.js +38 -0
  152. package/src/ToolBar/editTool.js +26 -0
  153. package/src/ToolBar/featureTool.js +34 -0
  154. package/src/ToolBar/findTool.js +2 -0
  155. package/src/ToolBar/importTool.js +27 -0
  156. package/src/ToolBar/index.js +231 -0
  157. package/src/ToolBar/inlineFindTool.js +38 -0
  158. package/src/ToolBar/oligoTool.js +30 -0
  159. package/src/ToolBar/orfTool.js +141 -0
  160. package/src/ToolBar/partTool.js +47 -0
  161. package/src/ToolBar/printTool.js +31 -0
  162. package/src/ToolBar/redoTool.js +30 -0
  163. package/src/ToolBar/saveTool.js +48 -0
  164. package/src/ToolBar/style.css +138 -0
  165. package/src/ToolBar/undoTool.js +30 -0
  166. package/src/ToolBar/veToolbarIcons/find.png +0 -0
  167. package/src/ToolBar/veToolbarIcons/fullscreen.png +0 -0
  168. package/src/ToolBar/veToolbarIcons/linear.png +0 -0
  169. package/src/ToolBar/veToolbarIcons/pie.png +0 -0
  170. package/src/ToolBar/veToolbarIcons/print.png +0 -0
  171. package/src/ToolBar/veToolbarIcons/save.png +0 -0
  172. package/src/ToolBar/veToolbarIcons/show_cut_sites.png +0 -0
  173. package/src/ToolBar/veToolbarIcons/show_features.png +0 -0
  174. package/src/ToolBar/veToolbarIcons/show_orfs.png +0 -0
  175. package/src/ToolBar/veToolbarIcons/show_primers.png +0 -0
  176. package/src/ToolBar/veToolbarIcons/toggle_views.svg +1 -0
  177. package/src/ToolBar/versionHistoryTool.js +20 -0
  178. package/src/ToolBar/visibilityTool.js +39 -0
  179. package/src/VersionHistoryView/index.js +215 -0
  180. package/src/addAlignment.js +6 -0
  181. package/src/commands/getOveHotkeyDefs.js +12 -0
  182. package/src/commands/index.js +1585 -0
  183. package/src/constants/constants.js +2 -0
  184. package/src/constants/dnaToColor.js +17 -0
  185. package/src/constants/draggableClassnames.js +5 -0
  186. package/src/constants/findToolConstants.js +1 -0
  187. package/src/constants/orfFrameToColorMap.js +10 -0
  188. package/src/constants/rowviewContants.js +3 -0
  189. package/src/constants/specialCutsiteFilterOptions.js +22 -0
  190. package/src/constants.js +1 -0
  191. package/src/createVectorEditor/index.js +138 -0
  192. package/src/createVectorEditor/makeStore.js +34 -0
  193. package/src/fileUtils.js +103 -0
  194. package/src/helperComponents/AddOrEditAnnotationDialog/index.js +711 -0
  195. package/src/helperComponents/AddOrEditAnnotationDialog/style.css +11 -0
  196. package/src/helperComponents/AddOrEditFeatureDialog/index.js +58 -0
  197. package/src/helperComponents/AddOrEditPartDialog/index.js +101 -0
  198. package/src/helperComponents/AddOrEditPrimerDialog/EditCaretPosition.js +234 -0
  199. package/src/helperComponents/AddOrEditPrimerDialog/index.js +329 -0
  200. package/src/helperComponents/AddOrEditPrimerDialog/style.css +41 -0
  201. package/src/helperComponents/EnzymesDialog/index.js +904 -0
  202. package/src/helperComponents/EnzymesDialog/style.css +21 -0
  203. package/src/helperComponents/GoToDialog.js +21 -0
  204. package/src/helperComponents/MergeFeaturesDialog/index.js +253 -0
  205. package/src/helperComponents/MergeFeaturesDialog/style.css +3 -0
  206. package/src/helperComponents/MultipleSeqsDetectedOnImportDialog.js +74 -0
  207. package/src/helperComponents/PinchHelper/PinchHelper.js +24 -0
  208. package/src/helperComponents/PrintDialog/index.js +396 -0
  209. package/src/helperComponents/PrintDialog/style.css +4 -0
  210. package/src/helperComponents/PropertiesDialog/ColorPicker.js +30 -0
  211. package/src/helperComponents/PropertiesDialog/CutsiteProperties.js +185 -0
  212. package/src/helperComponents/PropertiesDialog/FeatureProperties.js +6 -0
  213. package/src/helperComponents/PropertiesDialog/GenbankView.js +74 -0
  214. package/src/helperComponents/PropertiesDialog/GeneralProperties.js +140 -0
  215. package/src/helperComponents/PropertiesDialog/GenericAnnotationProperties.js +406 -0
  216. package/src/helperComponents/PropertiesDialog/OrfProperties.js +117 -0
  217. package/src/helperComponents/PropertiesDialog/PartProperties.js +9 -0
  218. package/src/helperComponents/PropertiesDialog/PrimerProperties.js +19 -0
  219. package/src/helperComponents/PropertiesDialog/SingleEnzymeCutsiteInfo.js +131 -0
  220. package/src/helperComponents/PropertiesDialog/TranslationProperties.js +149 -0
  221. package/src/helperComponents/PropertiesDialog/index.js +166 -0
  222. package/src/helperComponents/PropertiesDialog/style.css +68 -0
  223. package/src/helperComponents/PropertiesDialog/typeField.js +24 -0
  224. package/src/helperComponents/PropertiesDialog/utils.js +37 -0
  225. package/src/helperComponents/RemoveDuplicates/index.js +194 -0
  226. package/src/helperComponents/RenameSequenceDialog.js +7 -0
  227. package/src/helperComponents/SelectDialog.js +150 -0
  228. package/src/helperComponents/UncontrolledSliderWithPlusMinusBtns.css +5 -0
  229. package/src/helperComponents/UncontrolledSliderWithPlusMinusBtns.js +134 -0
  230. package/src/helperComponents/VeWarning/index.js +22 -0
  231. package/src/helperComponents/VeWarning/style.css +10 -0
  232. package/src/helperComponents/createSimpleDialog.js +89 -0
  233. package/src/helperComponents/partTagSearch.js +72 -0
  234. package/src/helperComponents/simpleDialog.css +13 -0
  235. package/src/helperComponents/withHover.js +90 -0
  236. package/src/index.js +60 -0
  237. package/src/redux/alignments.js +373 -0
  238. package/src/redux/annotationLabelVisibility.js +53 -0
  239. package/src/redux/annotationVisibility.js +196 -0
  240. package/src/redux/annotationsToSupport.js +104 -0
  241. package/src/redux/caretPosition.js +27 -0
  242. package/src/redux/charWidth.js +22 -0
  243. package/src/redux/copyOptions.js +34 -0
  244. package/src/redux/createYourOwnEnzyme.js +39 -0
  245. package/src/redux/deletionLayers.js +36 -0
  246. package/src/redux/digestTool.js +34 -0
  247. package/src/redux/featureLengthsToHide.js +27 -0
  248. package/src/redux/findTool.js +79 -0
  249. package/src/redux/frameTranslations.js +52 -0
  250. package/src/redux/hoveredAnnotation.js +24 -0
  251. package/src/redux/index.js +196 -0
  252. package/src/redux/labelLineIntensity.js +25 -0
  253. package/src/redux/labelSize.js +23 -0
  254. package/src/redux/lastSavedId.js +20 -0
  255. package/src/redux/middleware.js +112 -0
  256. package/src/redux/minimumOrfSize.js +24 -0
  257. package/src/redux/modalActions.js +3 -0
  258. package/src/redux/panelsShown.js +273 -0
  259. package/src/redux/partLengthsToHide.js +23 -0
  260. package/src/redux/primerLengthsToHide.js +27 -0
  261. package/src/redux/propertiesTool.js +40 -0
  262. package/src/redux/readOnly.js +28 -0
  263. package/src/redux/replacementLayers.js +36 -0
  264. package/src/redux/restrictionEnzymes.js +52 -0
  265. package/src/redux/selectedAnnotations.js +89 -0
  266. package/src/redux/selectedPartTags.js +21 -0
  267. package/src/redux/selectionLayer.js +46 -0
  268. package/src/redux/sequenceData/circular.js +19 -0
  269. package/src/redux/sequenceData/description.js +21 -0
  270. package/src/redux/sequenceData/features.js +19 -0
  271. package/src/redux/sequenceData/index.js +81 -0
  272. package/src/redux/sequenceData/lineageLines.js +11 -0
  273. package/src/redux/sequenceData/materiallyAvailable.js +19 -0
  274. package/src/redux/sequenceData/name.js +19 -0
  275. package/src/redux/sequenceData/parts.js +19 -0
  276. package/src/redux/sequenceData/primers.js +19 -0
  277. package/src/redux/sequenceData/sequence.js +12 -0
  278. package/src/redux/sequenceData/sharedActionCreators.js +0 -0
  279. package/src/redux/sequenceData/translations.js +20 -0
  280. package/src/redux/sequenceData/upsertDeleteActionGenerator.js +31 -0
  281. package/src/redux/sequenceDataHistory.js +43 -0
  282. package/src/redux/showGCContent.js +23 -0
  283. package/src/redux/toolBar.js +25 -0
  284. package/src/redux/uppercaseSequenceMapFont.js +25 -0
  285. package/src/redux/useAdditionalOrfStartCodons.js +24 -0
  286. package/src/redux/utils/addDashesForMatchStartAndEndForTracks/index.js +71 -0
  287. package/src/redux/utils/addMetaToActionCreators.js +12 -0
  288. package/src/redux/utils/createMergedDefaultStateReducer.js +30 -0
  289. package/src/redux/utils/createMetaAction.js +12 -0
  290. package/src/redux/versionHistory.js +27 -0
  291. package/src/selectors/annotationLabelVisibility.js +2 -0
  292. package/src/selectors/annotationSearchSelector.js +24 -0
  293. package/src/selectors/cdsFeaturesSelector.js +9 -0
  294. package/src/selectors/circularSelector.js +4 -0
  295. package/src/selectors/cutsiteLabelColorSelector.js +6 -0
  296. package/src/selectors/cutsitesByRangeSelector.js +5 -0
  297. package/src/selectors/cutsitesSelector.js +61 -0
  298. package/src/selectors/editorSelector.js +2 -0
  299. package/src/selectors/featuresSelector.js +8 -0
  300. package/src/selectors/filteredCutsitesSelector.js +137 -0
  301. package/src/selectors/filteredFeaturesSelector.js +32 -0
  302. package/src/selectors/filteredPartsSelector.js +57 -0
  303. package/src/selectors/filteredPrimersSelector.js +27 -0
  304. package/src/selectors/filteredRestrictionEnzymesSelector.js +1 -0
  305. package/src/selectors/getAdditionalEnzymesSelector.js +46 -0
  306. package/src/selectors/index.js +41 -0
  307. package/src/selectors/isEnzymeFilterAndSelector.js +1 -0
  308. package/src/selectors/minimumOrfSizeSelector.js +2 -0
  309. package/src/selectors/orfsSelector.js +15 -0
  310. package/src/selectors/partsSelector.js +8 -0
  311. package/src/selectors/primersSelector.js +8 -0
  312. package/src/selectors/restrictionEnzymesSelector.js +34 -0
  313. package/src/selectors/searchLayersSelector.js +71 -0
  314. package/src/selectors/selectedAnnotationsSelector.js +1 -0
  315. package/src/selectors/selectedCutsitesSelector.js +21 -0
  316. package/src/selectors/sequenceDataSelector.js +2 -0
  317. package/src/selectors/sequenceLengthSelector.js +5 -0
  318. package/src/selectors/sequenceSelector.js +4 -0
  319. package/src/selectors/tagsToBoldSelector.js +2 -0
  320. package/src/selectors/translationSearchMatchesSelector.js +14 -0
  321. package/src/selectors/translationsRawSelector.js +8 -0
  322. package/src/selectors/translationsSelector.js +137 -0
  323. package/src/style.css +82 -0
  324. package/src/updateEditor.js +198 -0
  325. package/src/utils/PassThrough.js +3 -0
  326. package/src/utils/addWrappedAddons.js +20 -0
  327. package/src/utils/annotationTypes.js +37 -0
  328. package/src/utils/arrayUtils.js +19 -0
  329. package/src/utils/calculateTickMarkPositionsForGivenRange.js +47 -0
  330. package/src/utils/cleanSequenceData_DEPRECATED/arrayToObjWithIds.js +17 -0
  331. package/src/utils/combineReducersDontIgnoreKeys.js +12 -0
  332. package/src/utils/commandUtils.js +18 -0
  333. package/src/utils/editorUtils.js +223 -0
  334. package/src/utils/getAnnotationClassnames.js +12 -0
  335. package/src/utils/getAnnotationNameAndStartStopString.js +61 -0
  336. package/src/utils/getVisibleStartEnd.js +7 -0
  337. package/src/utils/massageTickSpacing.js +19 -0
  338. package/src/utils/onlyUpdateForKeysDeep.js +31 -0
  339. package/src/utils/prepareRowData.js +64 -0
  340. package/src/utils/proteinUtils.js +3 -0
  341. package/src/utils/pureNoFunc.js +18 -0
  342. package/src/utils/selectionLayer.js +25 -0
  343. package/src/utils/shouldRerender.js +27 -0
  344. package/src/utils/showFileDialog.js +26 -0
  345. package/src/utils/updateLabelsForInViewFeatures.js +55 -0
  346. package/src/utils/updateLabelsForInViewFeaturesCircView.js +41 -0
  347. package/src/utils/useAAColorType.js +8 -0
  348. package/src/utils/useAnnotationLimits.js +42 -0
  349. package/src/utils/useChromatogramPrefs.js +31 -0
  350. package/src/utils/useLadders.js +6 -0
  351. package/src/utils/useMeltingTemp.js +7 -0
  352. package/src/utils/useTmType.js +10 -0
  353. package/src/withEditorInteractions/Keyboard.js +86 -0
  354. package/src/withEditorInteractions/clickAndDragUtils.js +576 -0
  355. package/src/withEditorInteractions/createSequenceInputPopup.js +296 -0
  356. package/src/withEditorInteractions/createSequenceInputPopupStyle.css +85 -0
  357. package/src/withEditorInteractions/getBpsPerRow.js +19 -0
  358. package/src/withEditorInteractions/index.js +1252 -0
  359. package/src/withEditorInteractions/isElementInViewport.js +29 -0
  360. package/src/withEditorInteractions/moveCaret.js +58 -0
  361. package/src/withEditorProps/index.js +1010 -0
  362. package/index.mjs +0 -193201
@@ -0,0 +1,576 @@
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+ import { noop } from "lodash";
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+ import {
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+ getRangeLength,
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+ trimRangeByAnotherRange,
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+ trimNumberToFitWithin0ToAnotherNumber,
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+ normalizePositionByRangeLength,
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+ expandOrContractRangeToPosition
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+ } from "@teselagen/range-utils";
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+
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+ let dragInProgress = false;
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+ let selectionStartOrEndGrabbed;
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+
13
+ let caretPositionOnDragStart;
14
+ export const editorDragged = function ({
15
+ nearestCaretPos,
16
+ doNotWrapOrigin,
17
+ caretPosition = -1,
18
+ easyStore,
19
+ caretPositionUpdate = noop,
20
+ selectionLayerUpdate = noop,
21
+ selectionLayer = { start: -1, end: -1 },
22
+ sequenceLength
23
+ }) {
24
+ if (easyStore && easyStore.selectionLayer) {
25
+ caretPosition = easyStore.caretPosition;
26
+ selectionLayer = easyStore.selectionLayer;
27
+ }
28
+ if (!dragInProgress) {
29
+ //we're starting the drag, so update the caret position!
30
+ dragInProgress = new Date().getTime();
31
+ return;
32
+ }
33
+
34
+ if (selectionLayer.start > -1 && selectionStartOrEndGrabbed === "start") {
35
+ handleSelectionStartGrabbed({
36
+ caretPosition,
37
+ selectionLayer,
38
+ caretPositionUpdate: caretPositionUpdate,
39
+ selectionLayerUpdate: selectionLayerUpdate,
40
+ nearestCaretPos,
41
+ sequenceLength,
42
+ doNotWrapOrigin
43
+ });
44
+ } else if (
45
+ selectionLayer.start > -1 &&
46
+ selectionStartOrEndGrabbed === "end"
47
+ ) {
48
+ handleSelectionEndGrabbed({
49
+ caretPosition,
50
+ selectionLayer,
51
+ caretPositionUpdate: caretPositionUpdate,
52
+ selectionLayerUpdate: selectionLayerUpdate,
53
+ nearestCaretPos,
54
+ sequenceLength,
55
+ doNotWrapOrigin
56
+ });
57
+ } else {
58
+ handleNoSelectionLayerYet({
59
+ caretPosition: caretPositionOnDragStart,
60
+ selectionLayer: caretPositionOnDragStart
61
+ ? { start: -1, end: -1 }
62
+ : selectionLayer,
63
+ selectionLayerUpdate: selectionLayerUpdate,
64
+ nearestCaretPos,
65
+ sequenceLength,
66
+ doNotWrapOrigin
67
+ });
68
+ }
69
+ };
70
+
71
+ export const editorClicked = function ({
72
+ nearestCaretPos,
73
+ shiftHeld,
74
+ updateSelectionOrCaret
75
+ }) {
76
+ const timeDif = new Date().getTime() - dragInProgress;
77
+ if (!dragInProgress || 200 > timeDif) {
78
+ //if the drag is less than 200 ms it probably isn't a real drag!
79
+ //we're not dragging the caret or selection handles
80
+ updateSelectionOrCaret(shiftHeld, nearestCaretPos);
81
+ }
82
+ };
83
+
84
+ export const editorDragStarted = function (opts) {
85
+ document?.body.classList.add("sequenceDragging"); //needed to prevent the input bubble from losing focus post user drag
86
+ window.__veDragging = true;
87
+
88
+ caretPositionOnDragStart = opts.nearestCaretPos; //bump the drag counter
89
+ selectionStartOrEndGrabbed = opts.selectionStartGrabbed
90
+ ? "start"
91
+ : opts.selectionEndGrabbed
92
+ ? "end"
93
+ : null;
94
+ };
95
+ export const editorDragStopped = function () {
96
+ document.body.classList.remove("sequenceDragging"); //needed to prevent the input bubble from losing focus post user drag
97
+ window.__veDragging = false;
98
+ caretPositionOnDragStart = null;
99
+ setTimeout(function () {
100
+ dragInProgress = false;
101
+ });
102
+ };
103
+
104
+ export function handleCaretMoved({
105
+ moveBy,
106
+ circular,
107
+ sequenceLength,
108
+ caretPosition,
109
+ selectionLayer,
110
+ shiftHeld,
111
+ type,
112
+ caretPositionUpdate,
113
+ selectionLayerUpdate
114
+ }) {
115
+ let newCaretPosition;
116
+ if (selectionLayer.start > -1) {
117
+ if (shiftHeld) {
118
+ newCaretPosition = normalizeNewCaretPos(
119
+ Number(
120
+ (selectionLayer.cursorAtEnd
121
+ ? selectionLayer.end + 1
122
+ : selectionLayer.start) + moveBy
123
+ ),
124
+ sequenceLength,
125
+ circular
126
+ );
127
+ // newCaretPosition = normalizeNewCaretPos(Number(caretPosition + moveBy), sequenceLength, circular);
128
+ let anchorPos;
129
+ if (selectionLayer.start <= selectionLayer.end) {
130
+ //non-circular selection
131
+ //define an anchor pos
132
+ if (selectionLayer.cursorAtEnd) {
133
+ if (newCaretPosition === selectionLayer.start && moveBy < 0) {
134
+ return caretPositionUpdate(newCaretPosition);
135
+ }
136
+ anchorPos = selectionLayer.start;
137
+ } else {
138
+ if (newCaretPosition === selectionLayer.end + 1 && moveBy > 0) {
139
+ return caretPositionUpdate(newCaretPosition);
140
+ }
141
+ anchorPos = selectionLayer.end + 1;
142
+ }
143
+ if (newCaretPosition > anchorPos) {
144
+ if (circular && selectionLayer.start + moveBy < 0) {
145
+ //we've gone around the origin in this case
146
+ selectionLayerUpdate({
147
+ start: newCaretPosition,
148
+ end: anchorPos - 1,
149
+ cursorAtEnd: false
150
+ });
151
+ } else {
152
+ selectionLayerUpdate({
153
+ start: anchorPos,
154
+ end: normalizePositionByRangeLength(
155
+ newCaretPosition - 1,
156
+ sequenceLength
157
+ ),
158
+ cursorAtEnd: true
159
+ });
160
+ }
161
+ } else {
162
+ if (circular && selectionLayer.end + moveBy >= sequenceLength) {
163
+ //we've gone around the origin in this case
164
+ selectionLayerUpdate({
165
+ start: anchorPos,
166
+ end: normalizePositionByRangeLength(
167
+ newCaretPosition - 1,
168
+ sequenceLength
169
+ ),
170
+ cursorAtEnd: true
171
+ });
172
+ } else {
173
+ selectionLayerUpdate({
174
+ start: newCaretPosition,
175
+ end: normalizePositionByRangeLength(
176
+ anchorPos - 1,
177
+ sequenceLength
178
+ ),
179
+ cursorAtEnd: false
180
+ });
181
+ }
182
+ }
183
+ } else {
184
+ //circular selection
185
+ if (selectionLayer.cursorAtEnd) {
186
+ anchorPos = selectionLayer.start;
187
+ } else {
188
+ anchorPos = selectionLayer.end + 1;
189
+ }
190
+
191
+ if (
192
+ (newCaretPosition <= anchorPos &&
193
+ !(!selectionLayer.cursorAtEnd && newCaretPosition - moveBy < 0)) || // if the move by is crossing the origin then we should make the new selection non circular
194
+ (selectionLayer.cursorAtEnd && selectionLayer.end + moveBy < 0)
195
+ ) {
196
+ selectionLayerUpdate({
197
+ start: anchorPos,
198
+ end: normalizePositionByRangeLength(
199
+ newCaretPosition - 1,
200
+ sequenceLength
201
+ ),
202
+ cursorAtEnd: true
203
+ });
204
+ } else {
205
+ selectionLayerUpdate({
206
+ start: normalizePositionByRangeLength(
207
+ newCaretPosition,
208
+ sequenceLength
209
+ ),
210
+ end: normalizePositionByRangeLength(anchorPos - 1, sequenceLength),
211
+ cursorAtEnd: false
212
+ });
213
+ }
214
+ }
215
+ } else {
216
+ //no shiftHeld
217
+ //handle special cases
218
+ if (moveBy === 0) {
219
+ if (type === "moveCaretRightOne") {
220
+ return caretPositionUpdate(selectionLayer.end + 1);
221
+ } else if (type === "moveCaretLeftOne") {
222
+ return caretPositionUpdate(selectionLayer.start);
223
+ } else {
224
+ throw new Error("this case should not be hit...");
225
+ }
226
+ } else if (moveBy > 0) {
227
+ newCaretPosition = normalizeNewCaretPos(
228
+ Number(selectionLayer.end + moveBy),
229
+ sequenceLength,
230
+ circular
231
+ );
232
+ caretPositionUpdate(1);
233
+ } else {
234
+ newCaretPosition = normalizeNewCaretPos(
235
+ Number(selectionLayer.start + moveBy),
236
+ sequenceLength,
237
+ circular
238
+ );
239
+ caretPositionUpdate(newCaretPosition);
240
+ }
241
+ }
242
+ } else {
243
+ //no selection layer
244
+ newCaretPosition = normalizeNewCaretPos(
245
+ Number(caretPosition + moveBy),
246
+ sequenceLength,
247
+ circular
248
+ );
249
+ if (shiftHeld) {
250
+ if (moveBy > 0) {
251
+ if (newCaretPosition === caretPosition) {
252
+ caretPositionUpdate(newCaretPosition);
253
+ } else {
254
+ selectionLayerUpdate({
255
+ start: caretPosition,
256
+ end: normalizePositionByRangeLength(
257
+ newCaretPosition - 1,
258
+ sequenceLength
259
+ ),
260
+ cursorAtEnd: true
261
+ });
262
+ }
263
+ } else {
264
+ //moving to the left
265
+ if (newCaretPosition === caretPosition) {
266
+ caretPositionUpdate(newCaretPosition);
267
+ } else {
268
+ selectionLayerUpdate({
269
+ start: newCaretPosition,
270
+ end: normalizePositionByRangeLength(
271
+ caretPosition - 1,
272
+ sequenceLength
273
+ ),
274
+ cursorAtEnd: false
275
+ });
276
+ }
277
+ }
278
+ } else {
279
+ //no shiftHeld
280
+ caretPositionUpdate(newCaretPosition);
281
+ }
282
+ }
283
+ }
284
+
285
+ export function normalizeNewCaretPos(caretPosition, sequenceLength, circular) {
286
+ if (circular) {
287
+ return normalizePositionByRangeLength(caretPosition, sequenceLength, true);
288
+ } else {
289
+ return trimNumberToFitWithin0ToAnotherNumber(caretPosition, sequenceLength);
290
+ }
291
+ }
292
+
293
+ export function handleSelectionStartGrabbed({
294
+ caretPosition,
295
+ selectionLayer,
296
+ selectionLayerUpdate,
297
+ nearestCaretPos,
298
+ sequenceLength,
299
+ doNotWrapOrigin,
300
+ caretPositionUpdate
301
+ }) {
302
+ if (selectionLayer.start < 0) {
303
+ handleNoSelectionLayerYet({
304
+ caretPosition,
305
+ selectionLayer,
306
+ selectionLayerUpdate,
307
+ nearestCaretPos,
308
+ sequenceLength,
309
+ doNotWrapOrigin
310
+ });
311
+ } else {
312
+ if (
313
+ doNotWrapOrigin &&
314
+ selectionLayer.end > -1 &&
315
+ nearestCaretPos === selectionLayer.end + 1
316
+ ) {
317
+ caretPositionUpdate(nearestCaretPos);
318
+ caretPositionOnDragStart = nearestCaretPos;
319
+ } else if (doNotWrapOrigin && nearestCaretPos > selectionLayer.end + 1) {
320
+ caretPositionOnDragStart = selectionLayer.end + 1;
321
+ selectionLayerUpdate({
322
+ start: selectionLayer.end + 1,
323
+ end: nearestCaretPos
324
+ });
325
+ selectionStartOrEndGrabbed = "end";
326
+ } else {
327
+ selectionStartOrEndGrabbed = "start";
328
+ //there must be a selection layer
329
+ //we need to move the selection layer
330
+ selectionLayerUpdate({
331
+ start: nearestCaretPos,
332
+ end: selectionLayer.end
333
+ });
334
+ }
335
+ }
336
+ }
337
+
338
+ export function handleSelectionEndGrabbed({
339
+ caretPosition,
340
+ selectionLayer,
341
+ selectionLayerUpdate,
342
+ nearestCaretPos,
343
+ sequenceLength,
344
+ doNotWrapOrigin,
345
+ caretPositionUpdate
346
+ }) {
347
+ if (selectionLayer.start < 0) {
348
+ handleNoSelectionLayerYet({
349
+ caretPosition,
350
+ selectionLayerUpdate,
351
+ nearestCaretPos,
352
+ sequenceLength,
353
+ doNotWrapOrigin
354
+ });
355
+ } else {
356
+ if (
357
+ doNotWrapOrigin &&
358
+ selectionLayer.start > -1 &&
359
+ nearestCaretPos === selectionLayer.start
360
+ ) {
361
+ caretPositionUpdate(nearestCaretPos);
362
+ caretPositionOnDragStart = nearestCaretPos;
363
+ } else if (doNotWrapOrigin && nearestCaretPos < selectionLayer.start) {
364
+ selectionLayerUpdate({
365
+ start: nearestCaretPos,
366
+ end: selectionLayer.start - 1
367
+ });
368
+ caretPositionOnDragStart = selectionLayer.start;
369
+ selectionStartOrEndGrabbed = "start";
370
+ } else {
371
+ selectionStartOrEndGrabbed = "end";
372
+ //there must be a selection layer
373
+ //we need to move the selection layer
374
+ const newEnd = Math.min(nearestCaretPos - 1, sequenceLength - 1);
375
+ selectionLayerUpdate({
376
+ start: selectionLayer.start,
377
+ end: newEnd,
378
+ cursorAtEnd: true
379
+ });
380
+ }
381
+ }
382
+ }
383
+ export function handleNoSelectionLayerYet({
384
+ caretPosition,
385
+ selectionLayerUpdate,
386
+ nearestCaretPos,
387
+ sequenceLength,
388
+ doNotWrapOrigin
389
+ }) {
390
+ //no selection layer yet, so we'll start one if necessary
391
+ // 0 1 2 3 4 5 6 7 8 9
392
+ // c
393
+ // n
394
+ //
395
+
396
+ const dragEnd = {
397
+ start: caretPosition,
398
+ end: normalizePositionByRangeLength(
399
+ nearestCaretPos - 1,
400
+ sequenceLength,
401
+ true
402
+ )
403
+ };
404
+ const dragStart = {
405
+ start: nearestCaretPos,
406
+ end: normalizePositionByRangeLength(caretPosition - 1, sequenceLength, true)
407
+ };
408
+ if (caretPosition === nearestCaretPos) {
409
+ return; // do nothing because nearestCaretPos === caretPosition
410
+ } else if (
411
+ (doNotWrapOrigin && caretPosition < nearestCaretPos) ||
412
+ (!doNotWrapOrigin &&
413
+ getRangeLength(dragEnd, sequenceLength) <
414
+ getRangeLength(dragStart, sequenceLength))
415
+ ) {
416
+ selectionStartOrEndGrabbed = "end";
417
+ selectionLayerUpdate(dragEnd);
418
+ caretPositionOnDragStart = null;
419
+ } else {
420
+ selectionStartOrEndGrabbed = "start";
421
+ selectionLayerUpdate(dragStart);
422
+ caretPositionOnDragStart = null;
423
+ }
424
+ }
425
+
426
+ export function updateSelectionOrCaret({
427
+ shiftHeld,
428
+ sequenceLength,
429
+ newRangeOrCaret,
430
+ caretPosition,
431
+ selectionLayer,
432
+ selectionLayerUpdate = noop,
433
+ caretPositionUpdate = noop,
434
+ doNotWrapOrigin
435
+ }) {
436
+ let newCaret;
437
+ let newRange;
438
+ if (typeof newRangeOrCaret !== "object") {
439
+ newCaret = newRangeOrCaret;
440
+ } else {
441
+ newRange = {
442
+ isFromRowView: newRangeOrCaret.isFromRowView,
443
+ start: newRangeOrCaret.start,
444
+ end: newRangeOrCaret.end,
445
+ forward: newRangeOrCaret.forward,
446
+ forceUpdate: newRangeOrCaret.forceUpdate,
447
+ overlapsSelf: newRangeOrCaret.overlapsSelf,
448
+ isWrappedAddon: newRangeOrCaret.isWrappedAddon
449
+ };
450
+ }
451
+ if (shiftHeld) {
452
+ if (caretPosition > 0) {
453
+ //there is a caret already down
454
+ if (newCaret > -1) {
455
+ //a new caret is being passed
456
+ handleNoSelectionLayerYet({
457
+ caretPosition,
458
+ selectionLayer,
459
+ selectionLayerUpdate,
460
+ nearestCaretPos: newCaret,
461
+ sequenceLength,
462
+ doNotWrapOrigin
463
+ });
464
+ } else {
465
+ simpleUpdate();
466
+ }
467
+ } else if (selectionLayer.start > -1) {
468
+ //there is already a selection layer
469
+ if (newCaret > -1) {
470
+ //new caret passed
471
+ const distanceFromStart = getMinRangeLength(
472
+ selectionLayer.start,
473
+ newCaret,
474
+ sequenceLength,
475
+ doNotWrapOrigin
476
+ );
477
+ const distanceFromEnd = getMinRangeLength(
478
+ selectionLayer.end,
479
+ newCaret,
480
+ sequenceLength,
481
+ doNotWrapOrigin
482
+ );
483
+ if (distanceFromStart < distanceFromEnd) {
484
+ selectionLayerUpdate({
485
+ start: newCaret,
486
+ end: selectionLayer.end
487
+ });
488
+ } else {
489
+ selectionLayerUpdate({
490
+ start: selectionLayer.start,
491
+ end: normalizePositionByRangeLength(
492
+ newCaret - 1,
493
+ sequenceLength,
494
+ true
495
+ )
496
+ });
497
+ }
498
+ } else {
499
+ //new range passed
500
+ // return selectionLayerUpdate(newRange);
501
+ const selectionFullyContained = !trimRangeByAnotherRange(
502
+ selectionLayer,
503
+ newRange
504
+ );
505
+ if (selectionFullyContained) {
506
+ return selectionLayerUpdate(newRange);
507
+ }
508
+
509
+ const newRangeFullyContained = !trimRangeByAnotherRange(
510
+ newRange,
511
+ selectionLayer
512
+ );
513
+
514
+ const { newRange: range1 } = expandOrContractRangeToPosition(
515
+ selectionLayer,
516
+ newRange.start,
517
+ sequenceLength
518
+ );
519
+ const { newRange: range2 } = expandOrContractRangeToPosition(
520
+ selectionLayer,
521
+ newRange.end + 1,
522
+ sequenceLength
523
+ ); //+1 to go from range end to position
524
+ const range1Shorter =
525
+ getRangeLength(range1, sequenceLength) <
526
+ getRangeLength(range2, sequenceLength);
527
+
528
+ if (newRangeFullyContained) {
529
+ range1Shorter
530
+ ? selectionLayerUpdate(range1)
531
+ : selectionLayerUpdate(range2);
532
+ } else {
533
+ selectionLayerUpdate({
534
+ forward: newRange.forward,
535
+ start: selectionLayer.start,
536
+ end: newRange.end
537
+ });
538
+ }
539
+ }
540
+ } else {
541
+ //no caret, no selection, so just do a simple update
542
+ simpleUpdate();
543
+ }
544
+ } else {
545
+ //no shift held, so just update the selection or caret
546
+ simpleUpdate();
547
+ }
548
+ function simpleUpdate() {
549
+ //shift not held, so just make a new selection layer or move the caret
550
+ if (newCaret > -1) {
551
+ caretPositionUpdate(newCaret);
552
+ } else {
553
+ selectionLayerUpdate(newRange);
554
+ }
555
+ }
556
+ }
557
+
558
+ // function isRangeShorterIfFlipped(start, end, sequenceLength) {
559
+ // return !(
560
+ // getRangeLength({ start, end }, sequenceLength) <
561
+ // getRangeLength({ start: end, end: start }, sequenceLength)
562
+ // );
563
+ // }
564
+
565
+ function getMinRangeLength(start, end, sequenceLength, doNotWrapOrigin) {
566
+ const range1 = getRangeLength({ start, end }, sequenceLength);
567
+ const range2 = getRangeLength({ start: end, end: start }, sequenceLength);
568
+ if (doNotWrapOrigin) {
569
+ if (start < end) {
570
+ return range1;
571
+ } else {
572
+ return range2;
573
+ }
574
+ }
575
+ return range1 < range2 ? range1 : range2;
576
+ }