@tekmidian/pai 0.5.6 → 0.6.0

package/dist/tools-DcaJlYDN.mjs.map

@@ -0,0 +1 @@
+{"version":3,"file":"tools-DcaJlYDN.mjs","names":[],"sources":["../src/mcp/tools/types.ts","../src/mcp/tools/memory.ts","../src/mcp/tools/projects.ts","../src/mcp/tools/sessions.ts","../src/mcp/tools/registry.ts","../src/mcp/tools/zettel.ts","../src/mcp/tools.ts"],"sourcesContent":["/**\n * Shared types and project-row helpers used across all MCP tool handler modules.\n */\n\nimport { resolve } from \"node:path\";\nimport type { Database } from \"better-sqlite3\";\n\nexport interface ToolContent {\n  type: \"text\";\n  text: string;\n}\n\nexport interface ToolResult {\n  content: ToolContent[];\n  isError?: boolean;\n}\n\n// ---------------------------------------------------------------------------\n// Shared row type — mirrors the projects SQLite schema\n// ---------------------------------------------------------------------------\n\nexport interface ProjectRow {\n  id: number;\n  slug: string;\n  display_name: string;\n  root_path: string;\n  type: string;\n  status: string;\n  created_at: number;\n  updated_at: number;\n  archived_at?: number | null;\n  parent_id?: number | null;\n  obsidian_link?: string | null;\n}\n\n// ---------------------------------------------------------------------------\n// Helper: lookup project_id by slug (also checks aliases)\n// ---------------------------------------------------------------------------\n\nexport function lookupProjectId(\n  registryDb: Database,\n  slug: string\n): number | null {\n  const bySlug = registryDb\n    .prepare(\"SELECT id FROM projects WHERE slug = ?\")\n    .get(slug) as { id: number } | undefined;\n  if (bySlug) return bySlug.id;\n\n  const byAlias = registryDb\n    .prepare(\"SELECT project_id FROM aliases WHERE alias = ?\")\n    .get(slug) as { project_id: number } | undefined;\n  if (byAlias) return byAlias.project_id;\n\n  return null;\n}\n\n// ---------------------------------------------------------------------------\n// Helper: detect project from a filesystem path\n// ---------------------------------------------------------------------------\n\nexport function detectProjectFromPath(\n  registryDb: Database,\n  fsPath: string\n): ProjectRow | null {\n  const resolved = resolve(fsPath);\n\n  const exact = registryDb\n    .prepare(\n      \"SELECT id, slug, display_name, root_path, type, status, created_at, updated_at FROM projects WHERE root_path = ?\"\n    )\n    .get(resolved) as ProjectRow | undefined;\n\n  if (exact) return exact;\n\n  const all = registryDb\n    .prepare(\n      \"SELECT id, slug, display_name, root_path, type, status, created_at, updated_at FROM projects ORDER BY LENGTH(root_path) DESC\"\n    )\n    .all() as ProjectRow[];\n\n  for (const project of all) {\n    if (\n      resolved.startsWith(project.root_path + \"/\") ||\n      resolved === project.root_path\n    ) {\n      return project;\n    }\n  }\n\n  return null;\n}\n\n// ---------------------------------------------------------------------------\n// Helper: format project row for tool output\n// ---------------------------------------------------------------------------\n\nexport function formatProject(registryDb: Database, project: ProjectRow): string {\n  const sessionCount = (\n    registryDb\n      .prepare(\"SELECT COUNT(*) AS n FROM sessions WHERE project_id = ?\")\n      .get(project.id) as { n: number }\n  ).n;\n\n  const lastSession = registryDb\n    .prepare(\n      \"SELECT date FROM sessions WHERE project_id = ? ORDER BY date DESC LIMIT 1\"\n    )\n    .get(project.id) as { date: string } | undefined;\n\n  const tags = (\n    registryDb\n      .prepare(\n        `SELECT t.name FROM tags t\n         JOIN project_tags pt ON pt.tag_id = t.id\n         WHERE pt.project_id = ?\n         ORDER BY t.name`\n      )\n      .all(project.id) as Array<{ name: string }>\n  ).map((r) => r.name);\n\n  const aliases = (\n    registryDb\n      .prepare(\"SELECT alias FROM aliases WHERE project_id = ? ORDER BY alias\")\n      .all(project.id) as Array<{ alias: string }>\n  ).map((r) => r.alias);\n\n  const lines: string[] = [\n    `slug: ${project.slug}`,\n    `display_name: ${project.display_name}`,\n    `root_path: ${project.root_path}`,\n    `type: ${project.type}`,\n    `status: ${project.status}`,\n    `sessions: ${sessionCount}`,\n  ];\n\n  if (lastSession) lines.push(`last_session: ${lastSession.date}`);\n  if (tags.length) lines.push(`tags: ${tags.join(\", \")}`);\n  if (aliases.length) lines.push(`aliases: ${aliases.join(\", \")}`);\n  if (project.obsidian_link) lines.push(`obsidian_link: ${project.obsidian_link}`);\n  if (project.archived_at) {\n    lines.push(\n      `archived_at: ${new Date(project.archived_at).toISOString().slice(0, 10)}`\n    );\n  }\n\n  return lines.join(\"\\n\");\n}\n","/**\n * MCP tool handlers: memory_search, memory_get\n */\n\nimport { readFileSync, existsSync, statSync } from \"node:fs\";\nimport { join, resolve, isAbsolute } from \"node:path\";\nimport type { Database } from \"better-sqlite3\";\nimport { populateSlugs, searchMemoryHybrid } from \"../../memory/search.js\";\nimport type { StorageBackend } from \"../../storage/interface.js\";\nimport type { SearchConfig } from \"../../daemon/config.js\";\nimport type { SearchResult } from \"../../memory/search.js\";\nimport {\n  lookupProjectId,\n  type ToolResult,\n} from \"./types.js\";\n\n// ---------------------------------------------------------------------------\n// Tool: memory_search\n// ---------------------------------------------------------------------------\n\nexport interface MemorySearchParams {\n  query: string;\n  project?: string;\n  all_projects?: boolean;\n  sources?: Array<\"memory\" | \"notes\">;\n  limit?: number;\n  mode?: \"keyword\" | \"semantic\" | \"hybrid\";\n  /** Rerank results using cross-encoder model for better relevance ordering. */\n  rerank?: boolean;\n  /** Apply recency boost — score decays by half every N days. 0 = off (default). */\n  recencyBoost?: number;\n  /** Maximum characters per result snippet. Default 200.\n   *  Limit context consumption — MCP results go into Claude's context window. */\n  snippetLength?: number;\n}\n\nexport async function toolMemorySearch(\n  registryDb: Database,\n  federation: Database | StorageBackend,\n  params: MemorySearchParams,\n  searchDefaults?: SearchConfig,\n): Promise<ToolResult> {\n  try {\n    const projectIds: number[] | undefined = params.project\n      ? (() => {\n          const id = lookupProjectId(registryDb, params.project!);\n          return id != null ? [id] : [];\n        })()\n      : undefined;\n\n    if (params.project && (!projectIds || projectIds.length === 0)) {\n      return {\n        content: [\n          { type: \"text\", text: `Project not found: ${params.project}` },\n        ],\n        isError: true,\n      };\n    }\n\n    // NOTE: No indexAll() here — indexing is handled by the daemon scheduler.\n    // The daemon ensures the index stays fresh; the search hot path is read-only.\n\n    const mode = params.mode ?? (searchDefaults?.mode ?? \"keyword\");\n    // Limit context consumption — MCP results go into Claude's context window.\n    // Default to 5 results and 200-char snippets to keep a single search call\n    // within ~1-2K tokens rather than 5K+.\n    const snippetLength = params.snippetLength ?? (searchDefaults?.snippetLength ?? 200);\n    const searchOpts = {\n      projectIds,\n      sources: params.sources,\n      maxResults: params.limit ?? (searchDefaults?.defaultLimit ?? 5),\n    };\n\n    let results;\n\n    // Determine if federation is a StorageBackend or a raw Database\n    const isBackend = (x: Database | StorageBackend): x is StorageBackend =>\n      \"backendType\" in x;\n\n    if (isBackend(federation)) {\n      // Use the storage backend interface (works for both SQLite and Postgres)\n      if (mode === \"keyword\") {\n        results = await federation.searchKeyword(params.query, searchOpts);\n      } else if (mode === \"semantic\" || mode === \"hybrid\") {\n        const { generateEmbedding } = await import(\"../../memory/embeddings.js\");\n        const queryEmbedding = await generateEmbedding(params.query, true);\n\n        if (mode === \"semantic\") {\n          results = await federation.searchSemantic(queryEmbedding, searchOpts);\n        } else {\n          // Hybrid: combine keyword + semantic\n          const [kwResults, semResults] = await Promise.all([\n            federation.searchKeyword(params.query, { ...searchOpts, maxResults: 50 }),\n            federation.searchSemantic(queryEmbedding, { ...searchOpts, maxResults: 50 }),\n          ]); // 50 candidates is sufficient for min-max normalization\n          // Reuse the existing hybrid scoring logic\n          results = combineHybridResults(kwResults, semResults, searchOpts.maxResults ?? 10);\n        }\n      } else {\n        results = await federation.searchKeyword(params.query, searchOpts);\n      }\n    } else {\n      // Legacy path: raw better-sqlite3 Database (for direct MCP server usage)\n      const { searchMemory, searchMemorySemantic } = await import(\"../../memory/search.js\");\n\n      if (mode === \"keyword\") {\n        results = searchMemory(federation, params.query, searchOpts);\n      } else if (mode === \"semantic\" || mode === \"hybrid\") {\n        const { generateEmbedding } = await import(\"../../memory/embeddings.js\");\n        const queryEmbedding = await generateEmbedding(params.query, true);\n\n        if (mode === \"semantic\") {\n          results = searchMemorySemantic(federation, queryEmbedding, searchOpts);\n        } else {\n          results = searchMemoryHybrid(\n            federation,\n            params.query,\n            queryEmbedding,\n            searchOpts\n          );\n        }\n      } else {\n        results = searchMemory(federation, params.query, searchOpts);\n      }\n    }\n\n    // Cross-encoder reranking (on by default)\n    const shouldRerank = params.rerank ?? (searchDefaults?.rerank ?? true);\n    if (shouldRerank && results.length > 0) {\n      const { rerankResults } = await import(\"../../memory/reranker.js\");\n      results = await rerankResults(params.query, results, {\n        topK: searchOpts.maxResults ?? 5,\n      });\n    }\n\n    // Recency boost (off by default, applied after reranking)\n    const recencyDays = params.recencyBoost ?? (searchDefaults?.recencyBoostDays ?? 0);\n    if (recencyDays > 0 && results.length > 0) {\n      const { applyRecencyBoost } = await import(\"../../memory/search.js\");\n      results = applyRecencyBoost(results, recencyDays);\n    }\n\n    const withSlugs = populateSlugs(results, registryDb);\n\n    if (withSlugs.length === 0) {\n      return {\n        content: [\n          {\n            type: \"text\",\n            text: `No results found for query: \"${params.query}\" (mode: ${mode})`,\n          },\n        ],\n      };\n    }\n\n    const rerankLabel = shouldRerank ? \" +rerank\" : \"\";\n    const formatted = withSlugs\n      .map((r, i) => {\n        const header = `[${i + 1}] ${r.projectSlug ?? `project:${r.projectId}`} — ${r.path} (lines ${r.startLine}-${r.endLine}) score=${r.score.toFixed(4)} tier=${r.tier} source=${r.source}`;\n        // Truncate snippet to snippetLength — limit context consumption.\n        // MCP results go into Claude's context window; keep each result tight.\n        const raw = r.snippet.trim();\n        const snippet = raw.length > snippetLength\n          ? raw.slice(0, snippetLength) + \"...\"\n          : raw;\n        return `${header}\\n${snippet}`;\n      })\n      .join(\"\\n\\n---\\n\\n\");\n\n    return {\n      content: [\n        {\n          type: \"text\",\n          text: `Found ${withSlugs.length} result(s) for \"${params.query}\" (mode: ${mode}${rerankLabel}):\\n\\n${formatted}`,\n        },\n      ],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `Search error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Tool: memory_get\n// ---------------------------------------------------------------------------\n\nexport interface MemoryGetParams {\n  project: string;\n  path: string;\n  from?: number;\n  lines?: number;\n}\n\nexport function toolMemoryGet(\n  registryDb: Database,\n  params: MemoryGetParams\n): ToolResult {\n  try {\n    const projectId = lookupProjectId(registryDb, params.project);\n    if (projectId == null) {\n      return {\n        content: [\n          { type: \"text\", text: `Project not found: ${params.project}` },\n        ],\n        isError: true,\n      };\n    }\n\n    const project = registryDb\n      .prepare(\"SELECT root_path FROM projects WHERE id = ?\")\n      .get(projectId) as { root_path: string } | undefined;\n\n    if (!project) {\n      return {\n        content: [\n          { type: \"text\", text: `Project not found: ${params.project}` },\n        ],\n        isError: true,\n      };\n    }\n\n    const requestedPath = params.path;\n    if (requestedPath.includes(\"..\") || isAbsolute(requestedPath)) {\n      return {\n        content: [\n          {\n            type: \"text\",\n            text: `Invalid path: ${params.path} (must be a relative path within the project root, no ../ allowed)`,\n          },\n        ],\n        isError: true,\n      };\n    }\n\n    const fullPath = join(project.root_path, requestedPath);\n    const resolvedFull = resolve(fullPath);\n    const resolvedRoot = resolve(project.root_path);\n\n    if (\n      !resolvedFull.startsWith(resolvedRoot + \"/\") &&\n      resolvedFull !== resolvedRoot\n    ) {\n      return {\n        content: [\n          { type: \"text\", text: `Path traversal blocked: ${params.path}` },\n        ],\n        isError: true,\n      };\n    }\n\n    if (!existsSync(fullPath)) {\n      return {\n        content: [\n          {\n            type: \"text\",\n            text: `File not found: ${requestedPath} (project: ${params.project})`,\n          },\n        ],\n        isError: true,\n      };\n    }\n\n    const stat = statSync(fullPath);\n    if (stat.size > 5 * 1024 * 1024) {\n      return {\n        content: [\n          {\n            type: \"text\",\n            text: `Error: file too large (${(stat.size / 1024 / 1024).toFixed(1)} MB). Maximum 5 MB.`,\n          },\n        ],\n      };\n    }\n\n    const content = readFileSync(fullPath, \"utf8\");\n    const allLines = content.split(\"\\n\");\n\n    const fromLine = (params.from ?? 1) - 1;\n    const toLine =\n      params.lines != null\n        ? Math.min(fromLine + params.lines, allLines.length)\n        : allLines.length;\n\n    const selectedLines = allLines.slice(fromLine, toLine);\n    const text = selectedLines.join(\"\\n\");\n\n    const header =\n      params.from != null\n        ? `${params.project}/${requestedPath} (lines ${fromLine + 1}-${toLine}):`\n        : `${params.project}/${requestedPath}:`;\n\n    return {\n      content: [{ type: \"text\", text: `${header}\\n\\n${text}` }],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `Read error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Hybrid search helper (backend-agnostic)\n// ---------------------------------------------------------------------------\n\n/**\n * Combine keyword + semantic results using min-max normalized scoring.\n * Mirrors the logic in searchMemoryHybrid() from memory/search.ts,\n * but works on pre-computed result arrays so it works for any backend.\n */\nexport function combineHybridResults(\n  keywordResults: SearchResult[],\n  semanticResults: SearchResult[],\n  maxResults: number,\n  keywordWeight = 0.5,\n  semanticWeight = 0.5\n): SearchResult[] {\n  if (keywordResults.length === 0 && semanticResults.length === 0) return [];\n\n  const keyFor = (r: SearchResult) =>\n    `${r.projectId}:${r.path}:${r.startLine}:${r.endLine}`;\n\n  function minMaxNormalize(items: SearchResult[]): Map<string, number> {\n    if (items.length === 0) return new Map();\n    const min = Math.min(...items.map((r) => r.score));\n    const max = Math.max(...items.map((r) => r.score));\n    const range = max - min;\n    const m = new Map<string, number>();\n    for (const r of items) {\n      m.set(keyFor(r), range === 0 ? 1 : (r.score - min) / range);\n    }\n    return m;\n  }\n\n  const kwNorm = minMaxNormalize(keywordResults);\n  const semNorm = minMaxNormalize(semanticResults);\n\n  const allKeys = new Set<string>([\n    ...keywordResults.map(keyFor),\n    ...semanticResults.map(keyFor),\n  ]);\n\n  const metaMap = new Map<string, SearchResult>();\n  for (const r of [...keywordResults, ...semanticResults]) {\n    metaMap.set(keyFor(r), r);\n  }\n\n  const combined: Array<SearchResult & { combinedScore: number }> = [];\n  for (const key of allKeys) {\n    const meta = metaMap.get(key)!;\n    const kwScore = kwNorm.get(key) ?? 0;\n    const semScore = semNorm.get(key) ?? 0;\n    const combinedScore = keywordWeight * kwScore + semanticWeight * semScore;\n    combined.push({ ...meta, score: combinedScore, combinedScore });\n  }\n\n  return combined\n    .sort((a, b) => b.score - a.score)\n    .slice(0, maxResults)\n    .map(({ combinedScore: _unused, ...r }) => r);\n}\n","/**\n * MCP tool handlers: project_info, project_list, project_detect,\n *                    project_health, project_todo\n */\n\nimport { readFileSync, existsSync } from \"node:fs\";\nimport { join } from \"node:path\";\nimport type { Database } from \"better-sqlite3\";\nimport { detectProject, formatDetectionJson } from \"../../cli/commands/detect.js\";\nimport {\n  lookupProjectId,\n  detectProjectFromPath,\n  formatProject,\n  type ProjectRow,\n  type ToolResult,\n} from \"./types.js\";\n\n// ---------------------------------------------------------------------------\n// Tool: project_info\n// ---------------------------------------------------------------------------\n\nexport interface ProjectInfoParams {\n  slug?: string;\n}\n\nexport function toolProjectInfo(\n  registryDb: Database,\n  params: ProjectInfoParams\n): ToolResult {\n  try {\n    let project: ProjectRow | null = null;\n\n    if (params.slug) {\n      const projectId = lookupProjectId(registryDb, params.slug);\n      if (projectId != null) {\n        project = registryDb\n          .prepare(\n            \"SELECT id, slug, display_name, root_path, type, status, created_at, updated_at, archived_at, parent_id, obsidian_link FROM projects WHERE id = ?\"\n          )\n          .get(projectId) as ProjectRow | null;\n      }\n    } else {\n      const cwd = process.cwd();\n      project = detectProjectFromPath(registryDb, cwd);\n    }\n\n    if (!project) {\n      const message = params.slug\n        ? `Project not found: ${params.slug}`\n        : `No PAI project found matching the current directory: ${process.cwd()}`;\n      return {\n        content: [{ type: \"text\", text: message }],\n        isError: !params.slug,\n      };\n    }\n\n    return {\n      content: [{ type: \"text\", text: formatProject(registryDb, project) }],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `project_info error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Tool: project_list\n// ---------------------------------------------------------------------------\n\nexport interface ProjectListParams {\n  status?: \"active\" | \"archived\" | \"migrating\";\n  tag?: string;\n  limit?: number;\n}\n\nexport function toolProjectList(\n  registryDb: Database,\n  params: ProjectListParams\n): ToolResult {\n  try {\n    const conditions: string[] = [];\n    const queryParams: (string | number)[] = [];\n\n    if (params.status) {\n      conditions.push(\"p.status = ?\");\n      queryParams.push(params.status);\n    }\n\n    if (params.tag) {\n      conditions.push(\n        \"p.id IN (SELECT pt.project_id FROM project_tags pt JOIN tags t ON pt.tag_id = t.id WHERE t.name = ?)\"\n      );\n      queryParams.push(params.tag);\n    }\n\n    const where =\n      conditions.length > 0 ? `WHERE ${conditions.join(\" AND \")}` : \"\";\n    const limit = params.limit ?? 50;\n    queryParams.push(limit);\n\n    const projects = registryDb\n      .prepare(\n        `SELECT p.id, p.slug, p.display_name, p.root_path, p.type, p.status, p.updated_at\n         FROM projects p\n         ${where}\n         ORDER BY p.updated_at DESC\n         LIMIT ?`\n      )\n      .all(...queryParams) as Array<{\n      id: number;\n      slug: string;\n      display_name: string;\n      root_path: string;\n      type: string;\n      status: string;\n      updated_at: number;\n    }>;\n\n    if (projects.length === 0) {\n      return {\n        content: [\n          {\n            type: \"text\",\n            text: \"No projects found matching the given filters.\",\n          },\n        ],\n      };\n    }\n\n    const lines = projects.map(\n      (p) =>\n        `${p.slug}  [${p.status}]  ${p.root_path}  (updated: ${new Date(p.updated_at).toISOString().slice(0, 10)})`\n    );\n\n    return {\n      content: [\n        {\n          type: \"text\",\n          text: `${projects.length} project(s):\\n\\n${lines.join(\"\\n\")}`,\n        },\n      ],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `project_list error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Tool: project_detect\n// ---------------------------------------------------------------------------\n\nexport interface ProjectDetectParams {\n  cwd?: string;\n}\n\nexport function toolProjectDetect(\n  registryDb: Database,\n  params: ProjectDetectParams\n): ToolResult {\n  try {\n    const detection = detectProject(registryDb, params.cwd);\n\n    if (!detection) {\n      const target = params.cwd ?? process.cwd();\n      return {\n        content: [\n          {\n            type: \"text\",\n            text: `No registered project found for path: ${target}\\n\\nRun 'pai project add .' to register this directory.`,\n          },\n        ],\n      };\n    }\n\n    return {\n      content: [{ type: \"text\", text: formatDetectionJson(detection) }],\n    };\n  } catch (e) {\n    return {\n      content: [\n        { type: \"text\", text: `project_detect error: ${String(e)}` },\n      ],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Tool: project_health\n// ---------------------------------------------------------------------------\n\nexport interface ProjectHealthParams {\n  category?: \"active\" | \"stale\" | \"dead\" | \"all\";\n}\n\nexport async function toolProjectHealth(\n  registryDb: Database,\n  params: ProjectHealthParams\n): Promise<ToolResult> {\n  try {\n    const { existsSync: fsExists, readdirSync, statSync } = await import(\n      \"node:fs\"\n    );\n    const {\n      join: pathJoin,\n      basename: pathBasename,\n    } = await import(\"node:path\");\n    const { homedir } = await import(\"node:os\");\n    const { encodeDir: enc } = await import(\"../../cli/utils.js\");\n\n    interface HealthRowLocal {\n      id: number;\n      slug: string;\n      display_name: string;\n      root_path: string;\n      encoded_dir: string;\n      status: string;\n      type: string;\n      session_count: number;\n    }\n\n    const rows = registryDb\n      .prepare(\n        `SELECT p.id, p.slug, p.display_name, p.root_path, p.encoded_dir, p.status, p.type,\n           (SELECT COUNT(*) FROM sessions s WHERE s.project_id = p.id) AS session_count\n         FROM projects p\n         ORDER BY p.slug ASC`\n      )\n      .all() as HealthRowLocal[];\n\n    const home = homedir();\n    const claudeProjects = pathJoin(home, \".claude\", \"projects\");\n\n    function suggestMoved(rootPath: string): string | undefined {\n      const name = pathBasename(rootPath);\n      const candidates = [\n        pathJoin(home, \"dev\", name),\n        pathJoin(home, \"dev\", \"ai\", name),\n        pathJoin(home, \"Desktop\", name),\n        pathJoin(home, \"Projects\", name),\n      ];\n      return candidates.find((c) => fsExists(c));\n    }\n\n    function hasClaudeNotes(encodedDir: string): boolean {\n      if (!fsExists(claudeProjects)) return false;\n      try {\n        for (const entry of readdirSync(claudeProjects)) {\n          if (entry !== encodedDir && !entry.startsWith(encodedDir)) continue;\n          const full = pathJoin(claudeProjects, entry);\n          try {\n            if (!statSync(full).isDirectory()) continue;\n          } catch {\n            continue;\n          }\n          if (fsExists(pathJoin(full, \"Notes\"))) return true;\n        }\n      } catch {\n        /* ignore */\n      }\n      return false;\n    }\n\n    interface HealthResult {\n      slug: string;\n      display_name: string;\n      root_path: string;\n      status: string;\n      type: string;\n      session_count: number;\n      health: string;\n      suggested_path: string | null;\n      has_claude_notes: boolean;\n      todo: {\n        found: boolean;\n        path: string | null;\n        has_continue: boolean;\n      };\n    }\n\n    function findTodoForProject(rootPath: string): {\n      found: boolean;\n      path: string | null;\n      has_continue: boolean;\n    } {\n      const locs = [\n        \"Notes/TODO.md\",\n        \".claude/Notes/TODO.md\",\n        \"tasks/todo.md\",\n        \"TODO.md\",\n      ];\n      for (const rel of locs) {\n        const full = pathJoin(rootPath, rel);\n        if (fsExists(full)) {\n          try {\n            const raw = readFileSync(full, \"utf8\");\n            const hasContinue = /^## Continue$/m.test(raw);\n            return { found: true, path: rel, has_continue: hasContinue };\n          } catch {\n            return { found: true, path: rel, has_continue: false };\n          }\n        }\n      }\n      return { found: false, path: null, has_continue: false };\n    }\n\n    const results: HealthResult[] = rows.map((p) => {\n      const pathExists = fsExists(p.root_path);\n      let health: string;\n      let suggestedPath: string | null = null;\n\n      if (pathExists) {\n        health = \"active\";\n      } else {\n        suggestedPath = suggestMoved(p.root_path) ?? null;\n        health = suggestedPath ? \"stale\" : \"dead\";\n      }\n\n      const todo = pathExists\n        ? findTodoForProject(p.root_path)\n        : { found: false, path: null, has_continue: false };\n\n      return {\n        slug: p.slug,\n        display_name: p.display_name,\n        root_path: p.root_path,\n        status: p.status,\n        type: p.type,\n        session_count: p.session_count,\n        health,\n        suggested_path: suggestedPath,\n        has_claude_notes: hasClaudeNotes(p.encoded_dir),\n        todo,\n      };\n    });\n\n    const filtered =\n      !params.category || params.category === \"all\"\n        ? results\n        : results.filter((r) => r.health === params.category);\n\n    const summary = {\n      total: rows.length,\n      active: results.filter((r) => r.health === \"active\").length,\n      stale: results.filter((r) => r.health === \"stale\").length,\n      dead: results.filter((r) => r.health === \"dead\").length,\n    };\n\n    return {\n      content: [\n        {\n          type: \"text\",\n          text: JSON.stringify({ summary, projects: filtered }, null, 2),\n        },\n      ],\n    };\n  } catch (e) {\n    return {\n      content: [\n        { type: \"text\", text: `project_health error: ${String(e)}` },\n      ],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Tool: project_todo\n// ---------------------------------------------------------------------------\n\nexport interface ProjectTodoParams {\n  project?: string;\n}\n\n/**\n * TODO candidate locations searched in priority order.\n * Returns the first one that exists, along with its label.\n */\nconst TODO_LOCATIONS = [\n  { rel: \"Notes/TODO.md\",       label: \"Notes/TODO.md\" },\n  { rel: \".claude/Notes/TODO.md\", label: \".claude/Notes/TODO.md\" },\n  { rel: \"tasks/todo.md\",       label: \"tasks/todo.md\" },\n  { rel: \"TODO.md\",             label: \"TODO.md\" },\n];\n\n/**\n * Given TODO file content, extract and surface the ## Continue section first,\n * then return the remaining content. Returns an object with:\n *   continueSection: string | null\n *   fullContent: string\n *   hasContinue: boolean\n */\nfunction parseTodoContent(raw: string): {\n  continueSection: string | null;\n  fullContent: string;\n  hasContinue: boolean;\n} {\n  const lines = raw.split(\"\\n\");\n\n  // Find the ## Continue heading\n  const continueIdx = lines.findIndex(\n    (l) => l.trim() === \"## Continue\"\n  );\n\n  if (continueIdx === -1) {\n    return { continueSection: null, fullContent: raw, hasContinue: false };\n  }\n\n  // The section ends at the first `---` separator or next `##` heading after\n  // the Continue heading (whichever comes first).\n  let endIdx = lines.length;\n  for (let i = continueIdx + 1; i < lines.length; i++) {\n    const trimmed = lines[i].trim();\n    if (trimmed === \"---\" || (trimmed.startsWith(\"##\") && trimmed !== \"## Continue\")) {\n      endIdx = i;\n      break;\n    }\n  }\n\n  const continueLines = lines.slice(continueIdx, endIdx);\n  const continueSection = continueLines.join(\"\\n\").trim();\n\n  return { continueSection, fullContent: raw, hasContinue: true };\n}\n\nexport function toolProjectTodo(\n  registryDb: Database,\n  params: ProjectTodoParams\n): ToolResult {\n  try {\n    let rootPath: string;\n    let projectSlug: string;\n\n    if (params.project) {\n      const projectId = lookupProjectId(registryDb, params.project);\n      if (projectId == null) {\n        return {\n          content: [\n            { type: \"text\", text: `Project not found: ${params.project}` },\n          ],\n          isError: true,\n        };\n      }\n\n      const row = registryDb\n        .prepare(\"SELECT root_path, slug FROM projects WHERE id = ?\")\n        .get(projectId) as { root_path: string; slug: string } | undefined;\n\n      if (!row) {\n        return {\n          content: [\n            { type: \"text\", text: `Project not found: ${params.project}` },\n          ],\n          isError: true,\n        };\n      }\n\n      rootPath = row.root_path;\n      projectSlug = row.slug;\n    } else {\n      // Auto-detect from cwd\n      const project = detectProjectFromPath(registryDb, process.cwd());\n      if (!project) {\n        return {\n          content: [\n            {\n              type: \"text\",\n              text: `No PAI project found matching the current directory: ${process.cwd()}\\n\\nProvide a project slug or run 'pai project add .' to register this directory.`,\n            },\n          ],\n        };\n      }\n      rootPath = project.root_path;\n      projectSlug = project.slug;\n    }\n\n    // Search for TODO in priority order\n    for (const loc of TODO_LOCATIONS) {\n      const fullPath = join(rootPath, loc.rel);\n      if (existsSync(fullPath)) {\n        const raw = readFileSync(fullPath, \"utf8\");\n        const { continueSection, fullContent, hasContinue } = parseTodoContent(raw);\n\n        let output: string;\n        if (hasContinue && continueSection) {\n          // Surface the ## Continue section first, then the full content\n          output = [\n            `TODO found: ${projectSlug}/${loc.label}`,\n            \"\",\n            \"=== CONTINUE SECTION (surfaced first) ===\",\n            continueSection,\n            \"\",\n            \"=== FULL TODO CONTENT ===\",\n            fullContent,\n          ].join(\"\\n\");\n        } else {\n          output = [\n            `TODO found: ${projectSlug}/${loc.label}`,\n            \"\",\n            fullContent,\n          ].join(\"\\n\");\n        }\n\n        return {\n          content: [{ type: \"text\", text: output }],\n        };\n      }\n    }\n\n    // No TODO found in any location\n    const searched = TODO_LOCATIONS.map((l) => `  ${rootPath}/${l.rel}`).join(\"\\n\");\n    return {\n      content: [\n        {\n          type: \"text\",\n          text: [\n            `No TODO.md found for project: ${projectSlug}`,\n            \"\",\n            \"Searched locations (in order):\",\n            searched,\n            \"\",\n            \"Create a TODO with: echo '## Tasks\\\\n- [ ] First task' > Notes/TODO.md\",\n          ].join(\"\\n\"),\n        },\n      ],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `project_todo error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n","/**\n * MCP tool handlers: session_list, session_route\n */\n\nimport type { Database } from \"better-sqlite3\";\nimport type { StorageBackend } from \"../../storage/interface.js\";\nimport {\n  lookupProjectId,\n  type ToolResult,\n} from \"./types.js\";\n\n// ---------------------------------------------------------------------------\n// Tool: session_list\n// ---------------------------------------------------------------------------\n\nexport interface SessionListParams {\n  project: string;\n  limit?: number;\n  status?: \"open\" | \"completed\" | \"compacted\";\n}\n\nexport function toolSessionList(\n  registryDb: Database,\n  params: SessionListParams\n): ToolResult {\n  try {\n    const projectId = lookupProjectId(registryDb, params.project);\n    if (projectId == null) {\n      return {\n        content: [\n          { type: \"text\", text: `Project not found: ${params.project}` },\n        ],\n        isError: true,\n      };\n    }\n\n    const conditions = [\"project_id = ?\"];\n    const queryParams: (string | number)[] = [projectId];\n\n    if (params.status) {\n      conditions.push(\"status = ?\");\n      queryParams.push(params.status);\n    }\n\n    const limit = params.limit ?? 10;\n    queryParams.push(limit);\n\n    const sessions = registryDb\n      .prepare(\n        `SELECT number, date, title, filename, status\n         FROM sessions\n         WHERE ${conditions.join(\" AND \")}\n         ORDER BY number DESC\n         LIMIT ?`\n      )\n      .all(...queryParams) as Array<{\n      number: number;\n      date: string;\n      title: string;\n      filename: string;\n      status: string;\n    }>;\n\n    if (sessions.length === 0) {\n      return {\n        content: [\n          {\n            type: \"text\",\n            text: `No sessions found for project: ${params.project}`,\n          },\n        ],\n      };\n    }\n\n    const lines = sessions.map(\n      (s) =>\n        `#${String(s.number).padStart(4, \"0\")}  ${s.date}  [${s.status}]  ${s.title}\\n        file: Notes/${s.filename}`\n    );\n\n    return {\n      content: [\n        {\n          type: \"text\",\n          text: `${sessions.length} session(s) for ${params.project}:\\n\\n${lines.join(\"\\n\\n\")}`,\n        },\n      ],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `session_list error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Tool: session_route\n// ---------------------------------------------------------------------------\n\nexport interface SessionRouteParams {\n  /** Working directory to route from (defaults to process.cwd()) */\n  cwd?: string;\n  /** Optional conversation context for topic-based fallback routing */\n  context?: string;\n}\n\n/**\n * Automatically suggest which project a session belongs to.\n *\n * Strategy (in priority order):\n *   1. path   — exact or parent-directory match in the project registry\n *   2. marker — walk up from cwd looking for Notes/PAI.md\n *   3. topic  — BM25 keyword search against memory (requires context)\n *\n * Call this at session start (e.g., from CLAUDE.md or a session-start hook)\n * to automatically route the session to the correct project.\n */\nexport async function toolSessionRoute(\n  registryDb: Database,\n  federation: Database | StorageBackend,\n  params: SessionRouteParams\n): Promise<ToolResult> {\n  try {\n    const { autoRoute, formatAutoRouteJson } = await import(\"../../session/auto-route.js\");\n\n    const result = await autoRoute(\n      registryDb,\n      federation,\n      params.cwd,\n      params.context\n    );\n\n    if (!result) {\n      const target = params.cwd ?? process.cwd();\n      return {\n        content: [\n          {\n            type: \"text\",\n            text: [\n              `No project match found for: ${target}`,\n              \"\",\n              \"Tried: path match, PAI.md marker walk\" +\n                (params.context ? \", topic detection\" : \"\"),\n              \"\",\n              \"Run 'pai project add .' to register this directory,\",\n              \"or provide conversation context for topic-based routing.\",\n            ].join(\"\\n\"),\n          },\n        ],\n      };\n    }\n\n    return {\n      content: [{ type: \"text\", text: formatAutoRouteJson(result) }],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `session_route error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n","/**\n * MCP tool handler: registry_search\n */\n\nimport type { Database } from \"better-sqlite3\";\nimport type { ToolResult } from \"./types.js\";\n\n// ---------------------------------------------------------------------------\n// Tool: registry_search\n// ---------------------------------------------------------------------------\n\nexport interface RegistrySearchParams {\n  query: string;\n}\n\nexport function toolRegistrySearch(\n  registryDb: Database,\n  params: RegistrySearchParams\n): ToolResult {\n  try {\n    const q = `%${params.query}%`;\n    const projects = registryDb\n      .prepare(\n        `SELECT id, slug, display_name, root_path, type, status, updated_at\n         FROM projects\n         WHERE slug LIKE ?\n            OR display_name LIKE ?\n            OR root_path LIKE ?\n         ORDER BY updated_at DESC\n         LIMIT 20`\n      )\n      .all(q, q, q) as Array<{\n      id: number;\n      slug: string;\n      display_name: string;\n      root_path: string;\n      type: string;\n      status: string;\n      updated_at: number;\n    }>;\n\n    if (projects.length === 0) {\n      return {\n        content: [\n          {\n            type: \"text\",\n            text: `No projects found matching: \"${params.query}\"`,\n          },\n        ],\n      };\n    }\n\n    const lines = projects.map((p) => `${p.slug}  [${p.status}]  ${p.root_path}`);\n\n    return {\n      content: [\n        {\n          type: \"text\",\n          text: `${projects.length} match(es) for \"${params.query}\":\\n\\n${lines.join(\"\\n\")}`,\n        },\n      ],\n    };\n  } catch (e) {\n    return {\n      content: [\n        { type: \"text\", text: `registry_search error: ${String(e)}` },\n      ],\n      isError: true,\n    };\n  }\n}\n","/**\n * MCP tool handlers: zettel_explore, zettel_health, zettel_surprise,\n *                    zettel_suggest, zettel_converse, zettel_themes\n */\n\nimport type { StorageBackend } from \"../../storage/interface.js\";\nimport type { ToolResult } from \"./types.js\";\n\n// ---------------------------------------------------------------------------\n// Tool: zettel_explore\n// ---------------------------------------------------------------------------\n\nexport interface ZettelExploreParams {\n  start_note: string;\n  depth?: number;\n  direction?: string;\n  mode?: string;\n}\n\nexport async function toolZettelExplore(\n  backend: StorageBackend,\n  params: ZettelExploreParams\n): Promise<ToolResult> {\n  try {\n    const { zettelExplore } = await import(\"../../zettelkasten/index.js\");\n    const result = await zettelExplore(backend, {\n      startNote: params.start_note,\n      depth: params.depth,\n      direction: params.direction as \"forward\" | \"backward\" | \"both\" | undefined,\n      mode: params.mode as \"sequential\" | \"associative\" | \"all\" | undefined,\n    });\n    return {\n      content: [{ type: \"text\", text: JSON.stringify(result, null, 2) }],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `zettel_explore error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Tool: zettel_health\n// ---------------------------------------------------------------------------\n\nexport interface ZettelHealthParams {\n  scope?: string;\n  project_path?: string;\n  recent_days?: number;\n  include?: string[];\n}\n\nexport async function toolZettelHealth(\n  backend: StorageBackend,\n  params: ZettelHealthParams\n): Promise<ToolResult> {\n  try {\n    const { zettelHealth } = await import(\"../../zettelkasten/index.js\");\n    const result = await zettelHealth(backend, {\n      scope: params.scope as \"full\" | \"recent\" | \"project\" | undefined,\n      projectPath: params.project_path,\n      recentDays: params.recent_days,\n      include: params.include as Array<\"dead_links\" | \"orphans\" | \"disconnected\" | \"low_connectivity\"> | undefined,\n    });\n    return {\n      content: [{ type: \"text\", text: JSON.stringify(result, null, 2) }],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `zettel_health error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Tool: zettel_surprise\n// ---------------------------------------------------------------------------\n\nexport interface ZettelSurpriseParams {\n  reference_path: string;\n  vault_project_id: number;\n  limit?: number;\n  min_similarity?: number;\n  min_graph_distance?: number;\n}\n\nexport async function toolZettelSurprise(\n  backend: StorageBackend,\n  params: ZettelSurpriseParams\n): Promise<ToolResult> {\n  try {\n    const { zettelSurprise } = await import(\"../../zettelkasten/index.js\");\n    const results = await zettelSurprise(backend, {\n      referencePath: params.reference_path,\n      vaultProjectId: params.vault_project_id,\n      limit: params.limit,\n      minSimilarity: params.min_similarity,\n      minGraphDistance: params.min_graph_distance,\n    });\n    return {\n      content: [{ type: \"text\", text: JSON.stringify(results, null, 2) }],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `zettel_surprise error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Tool: zettel_suggest\n// ---------------------------------------------------------------------------\n\nexport interface ZettelSuggestParams {\n  note_path: string;\n  vault_project_id: number;\n  limit?: number;\n  exclude_linked?: boolean;\n}\n\nexport async function toolZettelSuggest(\n  backend: StorageBackend,\n  params: ZettelSuggestParams\n): Promise<ToolResult> {\n  try {\n    const { zettelSuggest } = await import(\"../../zettelkasten/index.js\");\n    const results = await zettelSuggest(backend, {\n      notePath: params.note_path,\n      vaultProjectId: params.vault_project_id,\n      limit: params.limit,\n      excludeLinked: params.exclude_linked,\n    });\n    return {\n      content: [{ type: \"text\", text: JSON.stringify(results, null, 2) }],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `zettel_suggest error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Tool: zettel_converse\n// ---------------------------------------------------------------------------\n\nexport interface ZettelConverseParams {\n  question: string;\n  vault_project_id: number;\n  depth?: number;\n  limit?: number;\n}\n\nexport async function toolZettelConverse(\n  backend: StorageBackend,\n  params: ZettelConverseParams\n): Promise<ToolResult> {\n  try {\n    const { zettelConverse } = await import(\"../../zettelkasten/index.js\");\n    const result = await zettelConverse(backend, {\n      question: params.question,\n      vaultProjectId: params.vault_project_id,\n      depth: params.depth,\n      limit: params.limit,\n    });\n    return {\n      content: [{ type: \"text\", text: JSON.stringify(result, null, 2) }],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `zettel_converse error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Tool: zettel_themes\n// ---------------------------------------------------------------------------\n\nexport interface ZettelThemesParams {\n  vault_project_id: number;\n  lookback_days?: number;\n  min_cluster_size?: number;\n  max_themes?: number;\n  similarity_threshold?: number;\n}\n\nexport async function toolZettelThemes(\n  backend: StorageBackend,\n  params: ZettelThemesParams\n): Promise<ToolResult> {\n  try {\n    const { zettelThemes } = await import(\"../../zettelkasten/index.js\");\n    const result = await zettelThemes(backend, {\n      vaultProjectId: params.vault_project_id,\n      lookbackDays: params.lookback_days,\n      minClusterSize: params.min_cluster_size,\n      maxThemes: params.max_themes,\n      similarityThreshold: params.similarity_threshold,\n    });\n    return {\n      content: [{ type: \"text\", text: JSON.stringify(result, null, 2) }],\n    };\n  } catch (e) {\n    return {\n      content: [{ type: \"text\", text: `zettel_themes error: ${String(e)}` }],\n      isError: true,\n    };\n  }\n}\n","/**\n * PAI Knowledge OS — MCP tool handlers (barrel re-export)\n *\n * All tool implementations have been split into domain modules under\n * src/mcp/tools/. This file re-exports everything so existing imports\n * (from \"../mcp/tools.js\") continue to work unchanged.\n *\n * Domain modules:\n *   tools/types.ts         — shared types + project-row helpers\n *   tools/memory.ts        — memory_search, memory_get\n *   tools/projects.ts      — project_info, project_list, project_detect,\n *                            project_health, project_todo\n *   tools/sessions.ts      — session_list, session_route\n *   tools/registry.ts      — registry_search\n *   tools/notifications.ts — notification_config\n *   tools/topics.ts        — topic_detect\n *   tools/zettel.ts        — zettel_explore, zettel_health, zettel_surprise,\n *                            zettel_suggest, zettel_converse, zettel_themes\n *   tools/observations.ts  — observation_search, observation_timeline\n */\n\nexport * from 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package/dist/trace-CRx9lPuc.mjs

@@ -0,0 +1,137 @@
+//#region src/graph/trace.ts
+function folderFromPath(vaultPath) {
+	const lastSlash = vaultPath.lastIndexOf("/");
+	return lastSlash === -1 ? "" : vaultPath.slice(0, lastSlash);
+}
+function extractSnippet(text, query) {
+	const lowerText = text.toLowerCase();
+	const lowerQuery = query.toLowerCase();
+	const idx = lowerText.indexOf(lowerQuery);
+	if (idx === -1) return text.slice(0, 160).trimEnd() + (text.length > 160 ? "…" : "");
+	const CONTEXT = 70;
+	const start = Math.max(0, idx - CONTEXT);
+	const end = Math.min(text.length, idx + query.length + CONTEXT);
+	let snippet = text.slice(start, end).replace(/\s+/g, " ").trim();
+	if (start > 0) snippet = "…" + snippet;
+	if (end < text.length) snippet = snippet + "…";
+	return snippet;
+}
+async function handleGraphTrace(backend, params) {
+	const query = (params.query ?? "").trim();
+	if (!query) return {
+		query: "",
+		entries: [],
+		connections: [],
+		time_span: {
+			from: 0,
+			to: 0
+		}
+	};
+	const maxResults = params.max_results ?? 30;
+	const lookbackDays = params.lookback_days ?? 365;
+	const cutoffTimestamp = Math.floor(Date.now() / 1e3) - lookbackDays * 86400;
+	const matchedPaths = /* @__PURE__ */ new Map();
+	try {
+		const namePaths = await backend.searchVaultNameIndex(query, 100);
+		for (const vaultPath of namePaths) if (!matchedPaths.has(vaultPath)) matchedPaths.set(vaultPath, "");
+	} catch {}
+	try {
+		const chunkRows = await backend.searchChunksByText(params.project_id, query, 200);
+		for (const row of chunkRows) if (!matchedPaths.has(row.path)) matchedPaths.set(row.path, row.text);
+		else if (!matchedPaths.get(row.path)) matchedPaths.set(row.path, row.text);
+	} catch {}
+	if (matchedPaths.size === 0) return {
+		query,
+		entries: [],
+		connections: [],
+		time_span: {
+			from: 0,
+			to: 0
+		}
+	};
+	const allPaths = Array.from(matchedPaths.keys());
+	let fileRows = [];
+	try {
+		fileRows = await backend.getVaultFilesByPathsAfter(allPaths, cutoffTimestamp * 1e3);
+		fileRows.sort((a, b) => a.indexedAt - b.indexedAt);
+	} catch {
+		return {
+			query,
+			entries: [],
+			connections: [],
+			time_span: {
+				from: 0,
+				to: 0
+			}
+		};
+	}
+	if (fileRows.length === 0) return {
+		query,
+		entries: [],
+		connections: [],
+		time_span: {
+			from: 0,
+			to: 0
+		}
+	};
+	const entries = fileRows.slice(0, maxResults).map((row) => {
+		const fileName = row.vaultPath.split("/").pop() ?? row.vaultPath;
+		const title = row.title ?? fileName.replace(/\.md$/i, "");
+		const snippet = extractSnippet(matchedPaths.get(row.vaultPath) ?? "", query);
+		return {
+			vault_path: row.vaultPath,
+			title,
+			folder: folderFromPath(row.vaultPath),
+			indexed_at: row.indexedAt,
+			snippet,
+			dominant_type: "unknown"
+		};
+	});
+	if (entries.length === 0) return {
+		query,
+		entries: [],
+		connections: [],
+		time_span: {
+			from: 0,
+			to: 0
+		}
+	};
+	const connections = [];
+	const entryPathSet = new Set(entries.map((e) => e.vault_path));
+	for (let i = 0; i < entries.length - 1; i++) connections.push({
+		from_path: entries[i].vault_path,
+		to_path: entries[i + 1].vault_path,
+		type: "temporal"
+	});
+	try {
+		const entryPaths = entries.map((e) => e.vault_path);
+		const linkRows = await backend.getVaultLinksFromPaths(entryPaths);
+		const wikiEdgeKeys = /* @__PURE__ */ new Set();
+		for (const row of linkRows) {
+			if (!row.targetPath) continue;
+			if (!entryPathSet.has(row.targetPath)) continue;
+			const key = `${row.sourcePath}|||${row.targetPath}`;
+			if (wikiEdgeKeys.has(key)) continue;
+			wikiEdgeKeys.add(key);
+			connections.push({
+				from_path: row.sourcePath,
+				to_path: row.targetPath,
+				type: "wikilink"
+			});
+		}
+	} catch {}
+	const timestamps = entries.map((e) => e.indexed_at).filter((t) => t > 0);
+	return {
+		query,
+		entries,
+		connections,
+		time_span: {
+			from: timestamps.length > 0 ? Math.min(...timestamps) : 0,
+			to: timestamps.length > 0 ? Math.max(...timestamps) : 0
+		}
+	};
+}
+
+//#endregion
+export { handleGraphTrace };
+//# sourceMappingURL=trace-CRx9lPuc.mjs.map

package/dist/trace-CRx9lPuc.mjs.map

@@ -0,0 +1 @@
+{"version":3,"file":"trace-CRx9lPuc.mjs","names":[],"sources":["../src/graph/trace.ts"],"sourcesContent":["/**\n * trace.ts — graph_trace endpoint handler\n *\n * Given a topic/keyword query, searches vault notes for appearances of that topic\n * and returns a chronological timeline showing how the idea evolved over time.\n */\n\nimport type { StorageBackend } from \"../storage/interface.js\";\n\n// ---------------------------------------------------------------------------\n// Public param / result types\n// ---------------------------------------------------------------------------\n\nexport interface GraphTraceParams {\n  query: string;\n  project_id: number;\n  max_results?: number;\n  lookback_days?: number;\n}\n\nexport interface TraceEntry {\n  vault_path: string;\n  title: string;\n  folder: string;\n  indexed_at: number;\n  snippet: string;\n  dominant_type: string;\n}\n\nexport interface TraceConnection {\n  from_path: string;\n  to_path: string;\n  type: \"temporal\" | \"wikilink\";\n}\n\nexport interface GraphTraceResult {\n  query: string;\n  entries: TraceEntry[];\n  connections: TraceConnection[];\n  time_span: { from: number; to: number };\n}\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\nfunction folderFromPath(vaultPath: string): string {\n  const lastSlash = vaultPath.lastIndexOf(\"/\");\n  return lastSlash === -1 ? \"\" : vaultPath.slice(0, lastSlash);\n}\n\nfunction extractSnippet(text: string, query: string): string {\n  const lowerText = text.toLowerCase();\n  const lowerQuery = query.toLowerCase();\n  const idx = lowerText.indexOf(lowerQuery);\n  if (idx === -1) {\n    return text.slice(0, 160).trimEnd() + (text.length > 160 ? \"…\" : \"\");\n  }\n\n  const CONTEXT = 70;\n  const start = Math.max(0, idx - CONTEXT);\n  const end = Math.min(text.length, idx + query.length + CONTEXT);\n\n  let snippet = text.slice(start, end).replace(/\\s+/g, \" \").trim();\n  if (start > 0) snippet = \"…\" + snippet;\n  if (end < text.length) snippet = snippet + \"…\";\n\n  return snippet;\n}\n\n// ---------------------------------------------------------------------------\n// Main handler\n// ---------------------------------------------------------------------------\n\nexport async function handleGraphTrace(\n  backend: StorageBackend,\n  params: GraphTraceParams\n): Promise<GraphTraceResult> {\n  const query = (params.query ?? \"\").trim();\n  if (!query) {\n    return { query: \"\", entries: [], connections: [], time_span: { from: 0, to: 0 } };\n  }\n\n  const maxResults = params.max_results ?? 30;\n  const lookbackDays = params.lookback_days ?? 365;\n  const cutoffTimestamp = Math.floor(Date.now() / 1000) - lookbackDays * 86400;\n\n  // ---------------------------------------------------------------------------\n  // Step 1: Collect matching vault paths via multiple search strategies\n  // ---------------------------------------------------------------------------\n\n  const matchedPaths = new Map<string, string>(); // path → best snippet text\n\n  // Strategy A: title / alias match in vault_name_index\n  try {\n    const namePaths = await backend.searchVaultNameIndex(query, 100);\n    for (const vaultPath of namePaths) {\n      if (!matchedPaths.has(vaultPath)) {\n        matchedPaths.set(vaultPath, \"\");\n      }\n    }\n  } catch {\n    // vault_name_index may not exist in all schema versions\n  }\n\n  // Strategy B: content search in memory_chunks\n  try {\n    const chunkRows = await backend.searchChunksByText(params.project_id, query, 200);\n    for (const row of chunkRows) {\n      if (!matchedPaths.has(row.path)) {\n        matchedPaths.set(row.path, row.text);\n      } else if (!matchedPaths.get(row.path)) {\n        matchedPaths.set(row.path, row.text);\n      }\n    }\n  } catch {\n    // Best-effort — continue with what we have\n  }\n\n  if (matchedPaths.size === 0) {\n    return { query, entries: [], connections: [], time_span: { from: 0, to: 0 } };\n  }\n\n  // ---------------------------------------------------------------------------\n  // Step 2: Fetch vault_files metadata for all matched paths, filtered by cutoff\n  // ---------------------------------------------------------------------------\n\n  const allPaths = Array.from(matchedPaths.keys());\n  let fileRows: Array<{ vaultPath: string; title: string | null; indexedAt: number }> = [];\n  try {\n    fileRows = await backend.getVaultFilesByPathsAfter(allPaths, cutoffTimestamp * 1000);\n    // Sort chronologically\n    fileRows.sort((a, b) => a.indexedAt - b.indexedAt);\n  } catch {\n    return { query, entries: [], connections: [], time_span: { from: 0, to: 0 } };\n  }\n\n  if (fileRows.length === 0) {\n    return { query, entries: [], connections: [], time_span: { from: 0, to: 0 } };\n  }\n\n  // ---------------------------------------------------------------------------\n  // Step 3: Build TraceEntry array\n  // ---------------------------------------------------------------------------\n\n  const entries: TraceEntry[] = fileRows.slice(0, maxResults).map((row) => {\n    const fileName = row.vaultPath.split(\"/\").pop() ?? row.vaultPath;\n    const title = row.title ?? fileName.replace(/\\.md$/i, \"\");\n    const chunkText = matchedPaths.get(row.vaultPath) ?? \"\";\n    const snippet = extractSnippet(chunkText, query);\n\n    return {\n      vault_path: row.vaultPath,\n      title,\n      folder: folderFromPath(row.vaultPath),\n      indexed_at: row.indexedAt,\n      snippet,\n      dominant_type: \"unknown\",\n    };\n  });\n\n  if (entries.length === 0) {\n    return { query, entries: [], connections: [], time_span: { from: 0, to: 0 } };\n  }\n\n  // ---------------------------------------------------------------------------\n  // Step 4: Build connections\n  // ---------------------------------------------------------------------------\n\n  const connections: TraceConnection[] = [];\n  const entryPathSet = new Set(entries.map((e) => e.vault_path));\n\n  // Temporal edges: consecutive entries (oldest → next)\n  for (let i = 0; i < entries.length - 1; i++) {\n    connections.push({\n      from_path: entries[i].vault_path,\n      to_path: entries[i + 1].vault_path,\n      type: \"temporal\",\n    });\n  }\n\n  // Wikilink edges\n  try {\n    const entryPaths = entries.map(e => e.vault_path);\n    const linkRows = await backend.getVaultLinksFromPaths(entryPaths);\n\n    const wikiEdgeKeys = new Set<string>();\n    for (const row of linkRows) {\n      if (!row.targetPath) continue;\n      if (!entryPathSet.has(row.targetPath)) continue;\n\n      const key = `${row.sourcePath}|||${row.targetPath}`;\n      if (wikiEdgeKeys.has(key)) continue;\n      wikiEdgeKeys.add(key);\n\n      connections.push({\n        from_path: row.sourcePath,\n        to_path: row.targetPath,\n        type: \"wikilink\",\n      });\n    }\n  } catch {\n    // vault_links may not exist — temporal edges are sufficient\n  }\n\n  // ---------------------------------------------------------------------------\n  // Step 5: Compute time span\n  // ---------------------------------------------------------------------------\n\n  const timestamps = entries.map((e) => e.indexed_at).filter((t) => t > 0);\n  const timeFrom = timestamps.length > 0 ? Math.min(...timestamps) : 0;\n  const timeTo = timestamps.length > 0 ? Math.max(...timestamps) : 0;\n\n  return {\n    query,\n    entries,\n    connections,\n    time_span: { from: timeFrom, to: timeTo },\n  };\n}\n"],"mappings":";AA8CA,SAAS,eAAe,WAA2B;CACjD,MAAM,YAAY,UAAU,YAAY,IAAI;AAC5C,QAAO,cAAc,KAAK,KAAK,UAAU,MAAM,GAAG,UAAU;;AAG9D,SAAS,eAAe,MAAc,OAAuB;CAC3D,MAAM,YAAY,KAAK,aAAa;CACpC,MAAM,aAAa,MAAM,aAAa;CACtC,MAAM,MAAM,UAAU,QAAQ,WAAW;AACzC,KAAI,QAAQ,GACV,QAAO,KAAK,MAAM,GAAG,IAAI,CAAC,SAAS,IAAI,KAAK,SAAS,MAAM,MAAM;CAGnE,MAAM,UAAU;CAChB,MAAM,QAAQ,KAAK,IAAI,GAAG,MAAM,QAAQ;CACxC,MAAM,MAAM,KAAK,IAAI,KAAK,QAAQ,MAAM,MAAM,SAAS,QAAQ;CAE/D,IAAI,UAAU,KAAK,MAAM,OAAO,IAAI,CAAC,QAAQ,QAAQ,IAAI,CAAC,MAAM;AAChE,KAAI,QAAQ,EAAG,WAAU,MAAM;AAC/B,KAAI,MAAM,KAAK,OAAQ,WAAU,UAAU;AAE3C,QAAO;;AAOT,eAAsB,iBACpB,SACA,QAC2B;CAC3B,MAAM,SAAS,OAAO,SAAS,IAAI,MAAM;AACzC,KAAI,CAAC,MACH,QAAO;EAAE,OAAO;EAAI,SAAS,EAAE;EAAE,aAAa,EAAE;EAAE,WAAW;GAAE,MAAM;GAAG,IAAI;GAAG;EAAE;CAGnF,MAAM,aAAa,OAAO,eAAe;CACzC,MAAM,eAAe,OAAO,iBAAiB;CAC7C,MAAM,kBAAkB,KAAK,MAAM,KAAK,KAAK,GAAG,IAAK,GAAG,eAAe;CAMvE,MAAM,+BAAe,IAAI,KAAqB;AAG9C,KAAI;EACF,MAAM,YAAY,MAAM,QAAQ,qBAAqB,OAAO,IAAI;AAChE,OAAK,MAAM,aAAa,UACtB,KAAI,CAAC,aAAa,IAAI,UAAU,CAC9B,cAAa,IAAI,WAAW,GAAG;SAG7B;AAKR,KAAI;EACF,MAAM,YAAY,MAAM,QAAQ,mBAAmB,OAAO,YAAY,OAAO,IAAI;AACjF,OAAK,MAAM,OAAO,UAChB,KAAI,CAAC,aAAa,IAAI,IAAI,KAAK,CAC7B,cAAa,IAAI,IAAI,MAAM,IAAI,KAAK;WAC3B,CAAC,aAAa,IAAI,IAAI,KAAK,CACpC,cAAa,IAAI,IAAI,MAAM,IAAI,KAAK;SAGlC;AAIR,KAAI,aAAa,SAAS,EACxB,QAAO;EAAE;EAAO,SAAS,EAAE;EAAE,aAAa,EAAE;EAAE,WAAW;GAAE,MAAM;GAAG,IAAI;GAAG;EAAE;CAO/E,MAAM,WAAW,MAAM,KAAK,aAAa,MAAM,CAAC;CAChD,IAAI,WAAkF,EAAE;AACxF,KAAI;AACF,aAAW,MAAM,QAAQ,0BAA0B,UAAU,kBAAkB,IAAK;AAEpF,WAAS,MAAM,GAAG,MAAM,EAAE,YAAY,EAAE,UAAU;SAC5C;AACN,SAAO;GAAE;GAAO,SAAS,EAAE;GAAE,aAAa,EAAE;GAAE,WAAW;IAAE,MAAM;IAAG,IAAI;IAAG;GAAE;;AAG/E,KAAI,SAAS,WAAW,EACtB,QAAO;EAAE;EAAO,SAAS,EAAE;EAAE,aAAa,EAAE;EAAE,WAAW;GAAE,MAAM;GAAG,IAAI;GAAG;EAAE;CAO/E,MAAM,UAAwB,SAAS,MAAM,GAAG,WAAW,CAAC,KAAK,QAAQ;EACvE,MAAM,WAAW,IAAI,UAAU,MAAM,IAAI,CAAC,KAAK,IAAI,IAAI;EACvD,MAAM,QAAQ,IAAI,SAAS,SAAS,QAAQ,UAAU,GAAG;EAEzD,MAAM,UAAU,eADE,aAAa,IAAI,IAAI,UAAU,IAAI,IACX,MAAM;AAEhD,SAAO;GACL,YAAY,IAAI;GAChB;GACA,QAAQ,eAAe,IAAI,UAAU;GACrC,YAAY,IAAI;GAChB;GACA,eAAe;GAChB;GACD;AAEF,KAAI,QAAQ,WAAW,EACrB,QAAO;EAAE;EAAO,SAAS,EAAE;EAAE,aAAa,EAAE;EAAE,WAAW;GAAE,MAAM;GAAG,IAAI;GAAG;EAAE;CAO/E,MAAM,cAAiC,EAAE;CACzC,MAAM,eAAe,IAAI,IAAI,QAAQ,KAAK,MAAM,EAAE,WAAW,CAAC;AAG9D,MAAK,IAAI,IAAI,GAAG,IAAI,QAAQ,SAAS,GAAG,IACtC,aAAY,KAAK;EACf,WAAW,QAAQ,GAAG;EACtB,SAAS,QAAQ,IAAI,GAAG;EACxB,MAAM;EACP,CAAC;AAIJ,KAAI;EACF,MAAM,aAAa,QAAQ,KAAI,MAAK,EAAE,WAAW;EACjD,MAAM,WAAW,MAAM,QAAQ,uBAAuB,WAAW;EAEjE,MAAM,+BAAe,IAAI,KAAa;AACtC,OAAK,MAAM,OAAO,UAAU;AAC1B,OAAI,CAAC,IAAI,WAAY;AACrB,OAAI,CAAC,aAAa,IAAI,IAAI,WAAW,CAAE;GAEvC,MAAM,MAAM,GAAG,IAAI,WAAW,KAAK,IAAI;AACvC,OAAI,aAAa,IAAI,IAAI,CAAE;AAC3B,gBAAa,IAAI,IAAI;AAErB,eAAY,KAAK;IACf,WAAW,IAAI;IACf,SAAS,IAAI;IACb,MAAM;IACP,CAAC;;SAEE;CAQR,MAAM,aAAa,QAAQ,KAAK,MAAM,EAAE,WAAW,CAAC,QAAQ,MAAM,IAAI,EAAE;AAIxE,QAAO;EACL;EACA;EACA;EACA,WAAW;GAAE,MAPE,WAAW,SAAS,IAAI,KAAK,IAAI,GAAG,WAAW,GAAG;GAOpC,IANhB,WAAW,SAAS,IAAI,KAAK,IAAI,GAAG,WAAW,GAAG;GAMtB;EAC1C"}