@sudosandwich/limps 2.8.0 → 2.9.0

package/dist/config.js.map

@@ -1 +1 @@
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package/dist/graph/schema.d.ts

@@ -0,0 +1,4 @@
+import type { Database as DatabaseType } from 'better-sqlite3';
+export declare const SCHEMA_SQL: string;
+export declare function createGraphSchema(db: DatabaseType): void;
+//# sourceMappingURL=schema.d.ts.map

package/dist/graph/schema.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"schema.d.ts","sourceRoot":"","sources":["../../src/graph/schema.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,QAAQ,IAAI,YAAY,EAAE,MAAM,gBAAgB,CAAC;AAM/D,eAAO,MAAM,UAAU,QAqEtB,CAAC;AAEF,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,YAAY,GAAG,IAAI,CAExD"}

package/dist/graph/schema.js

@@ -0,0 +1,77 @@
+import { ENTITY_TYPES, RELATION_TYPES } from './types.js';
+const entityTypeList = ENTITY_TYPES.map((type) => `'${type}'`).join(', ');
+const relationTypeList = RELATION_TYPES.map((type) => `'${type}'`).join(', ');
+export const SCHEMA_SQL = `
+-- Entities table
+CREATE TABLE IF NOT EXISTS entities (
+  id INTEGER PRIMARY KEY AUTOINCREMENT,
+  type TEXT NOT NULL CHECK(type IN (${entityTypeList})),
+  canonical_id TEXT NOT NULL,
+  name TEXT NOT NULL,
+  source_path TEXT,
+  content_hash TEXT,
+  metadata TEXT DEFAULT '{}',
+  created_at TEXT DEFAULT (datetime('now')),
+  updated_at TEXT DEFAULT (datetime('now')),
+  UNIQUE(type, canonical_id)
+);
+
+-- Relationships table
+CREATE TABLE IF NOT EXISTS relationships (
+  id INTEGER PRIMARY KEY AUTOINCREMENT,
+  source_id INTEGER NOT NULL REFERENCES entities(id) ON DELETE CASCADE,
+  target_id INTEGER NOT NULL REFERENCES entities(id) ON DELETE CASCADE,
+  relation_type TEXT NOT NULL CHECK(relation_type IN (${relationTypeList})),
+  confidence REAL DEFAULT 1.0,
+  metadata TEXT DEFAULT '{}',
+  created_at TEXT DEFAULT (datetime('now')),
+  UNIQUE(source_id, target_id, relation_type)
+);
+
+-- Indexes for fast lookups
+CREATE INDEX IF NOT EXISTS idx_entities_type ON entities(type);
+CREATE INDEX IF NOT EXISTS idx_entities_canonical ON entities(canonical_id);
+CREATE INDEX IF NOT EXISTS idx_entities_source ON entities(source_path);
+CREATE INDEX IF NOT EXISTS idx_entities_hash ON entities(content_hash);
+
+CREATE INDEX IF NOT EXISTS idx_rel_source ON relationships(source_id);
+CREATE INDEX IF NOT EXISTS idx_rel_target ON relationships(target_id);
+CREATE INDEX IF NOT EXISTS idx_rel_type ON relationships(relation_type);
+
+-- Full-text search on entity names (for lexical retrieval)
+CREATE VIRTUAL TABLE IF NOT EXISTS entities_fts USING fts5(
+  canonical_id,
+  name,
+  content='entities',
+  content_rowid='id'
+);
+
+-- Triggers to keep FTS in sync
+CREATE TRIGGER IF NOT EXISTS entities_ai AFTER INSERT ON entities BEGIN
+  INSERT INTO entities_fts(rowid, canonical_id, name)
+  VALUES (new.id, new.canonical_id, new.name);
+END;
+
+CREATE TRIGGER IF NOT EXISTS entities_ad AFTER DELETE ON entities BEGIN
+  INSERT INTO entities_fts(entities_fts, rowid, canonical_id, name)
+  VALUES ('delete', old.id, old.canonical_id, old.name);
+END;
+
+CREATE TRIGGER IF NOT EXISTS entities_au AFTER UPDATE ON entities BEGIN
+  INSERT INTO entities_fts(entities_fts, rowid, canonical_id, name)
+  VALUES ('delete', old.id, old.canonical_id, old.name);
+  INSERT INTO entities_fts(rowid, canonical_id, name)
+  VALUES (new.id, new.canonical_id, new.name);
+END;
+
+-- Graph metadata table
+CREATE TABLE IF NOT EXISTS graph_meta (
+  key TEXT PRIMARY KEY,
+  value TEXT,
+  updated_at TEXT DEFAULT (datetime('now'))
+);
+`;
+export function createGraphSchema(db) {
+    db.exec(SCHEMA_SQL);
+}
+//# sourceMappingURL=schema.js.map

package/dist/graph/schema.js.map

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package/dist/graph/storage.d.ts

@@ -0,0 +1,26 @@
+import type { Database as DatabaseType } from 'better-sqlite3';
+import type { Entity, EntityType, GraphStats, RelationType, Relationship } from './types.js';
+export declare class GraphStorage {
+    private db;
+    constructor(db: DatabaseType);
+    upsertEntity(entity: Omit<Entity, 'id' | 'createdAt' | 'updatedAt'>): Entity;
+    getEntity(canonicalId: string, type?: EntityType): Entity | null;
+    getEntitiesByType(type: EntityType): Entity[];
+    getEntitiesBySource(sourcePath: string): Entity[];
+    deleteEntity(canonicalId: string, type?: EntityType): boolean;
+    upsertRelationship(rel: Omit<Relationship, 'id' | 'createdAt'>): Relationship;
+    getRelationships(entityId: number, direction: 'outgoing' | 'incoming' | 'both'): Relationship[];
+    getRelationshipsByType(type: RelationType): Relationship[];
+    deleteRelationship(sourceId: number, targetId: number, type: RelationType): boolean;
+    getNeighbors(entityId: number, relationType?: RelationType): Entity[];
+    getPath(fromId: number, toId: number, maxDepth: number, maxPaths?: number): Entity[][] | null;
+    bulkUpsertEntities(entities: Entity[]): number;
+    bulkUpsertRelationships(rels: Relationship[]): number;
+    deleteEntitiesBySource(sourcePath: string): number;
+    getStats(): GraphStats;
+    searchEntities(query: string, limit: number): Entity[];
+    private getEntityById;
+}
+export declare function computeContentHash(content: string): string;
+export declare function hasChanged(storage: GraphStorage, sourcePath: string, currentHash: string): boolean;
+//# sourceMappingURL=storage.d.ts.map

package/dist/graph/storage.d.ts.map

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package/dist/graph/storage.js

@@ -0,0 +1,441 @@
+import { createHash } from 'crypto';
+import { ENTITY_TYPES, RELATION_TYPES } from './types.js';
+function resolveEntityType(canonicalId, explicitType) {
+    if (explicitType) {
+        return explicitType;
+    }
+    const [prefix] = canonicalId.split(':');
+    if (prefix && ENTITY_TYPES.includes(prefix)) {
+        return prefix;
+    }
+    return null;
+}
+function parseMetadata(value) {
+    if (!value) {
+        return {};
+    }
+    if (typeof value === 'object') {
+        return value;
+    }
+    try {
+        return JSON.parse(value);
+    }
+    catch (error) {
+        const errorMessage = error instanceof Error ? error.message : String(error);
+        console.warn('GraphStorage.parseMetadata failed; returning empty object.', {
+            error: errorMessage,
+        });
+        return {};
+    }
+}
+function mapEntity(row) {
+    return {
+        id: row.id,
+        type: row.type,
+        canonicalId: row.canonical_id,
+        name: row.name,
+        sourcePath: row.source_path ?? undefined,
+        contentHash: row.content_hash ?? undefined,
+        metadata: parseMetadata(row.metadata),
+        createdAt: row.created_at,
+        updatedAt: row.updated_at,
+    };
+}
+function mapRelationship(row) {
+    return {
+        id: row.id,
+        sourceId: row.source_id,
+        targetId: row.target_id,
+        relationType: row.relation_type,
+        confidence: row.confidence,
+        metadata: parseMetadata(row.metadata),
+        createdAt: row.created_at,
+    };
+}
+function normalizeTimestamp(value, fallback) {
+    return value && value.trim().length > 0 ? value : fallback;
+}
+export class GraphStorage {
+    db;
+    constructor(db) {
+        this.db = db;
+        this.db.pragma('foreign_keys = ON');
+    }
+    upsertEntity(entity) {
+        const now = new Date().toISOString();
+        const metadata = JSON.stringify(entity.metadata ?? {});
+        this.db
+            .prepare(`
+        INSERT INTO entities (
+          type,
+          canonical_id,
+          name,
+          source_path,
+          content_hash,
+          metadata,
+          created_at,
+          updated_at
+        )
+        VALUES (@type, @canonicalId, @name, @sourcePath, @contentHash, @metadata, @createdAt, @updatedAt)
+        ON CONFLICT(type, canonical_id) DO UPDATE SET
+          name = excluded.name,
+          source_path = excluded.source_path,
+          content_hash = excluded.content_hash,
+          metadata = excluded.metadata,
+          updated_at = excluded.updated_at
+      `)
+            .run({
+            type: entity.type,
+            canonicalId: entity.canonicalId,
+            name: entity.name,
+            sourcePath: entity.sourcePath ?? null,
+            contentHash: entity.contentHash ?? null,
+            metadata,
+            createdAt: now,
+            updatedAt: now,
+        });
+        const row = this.db
+            .prepare('SELECT * FROM entities WHERE type = ? AND canonical_id = ?')
+            .get(entity.type, entity.canonicalId);
+        if (!row) {
+            throw new Error(`Failed to upsert entity: ${entity.canonicalId}`);
+        }
+        return mapEntity(row);
+    }
+    getEntity(canonicalId, type) {
+        const resolvedType = resolveEntityType(canonicalId, type);
+        const row = resolvedType
+            ? this.db
+                .prepare('SELECT * FROM entities WHERE type = ? AND canonical_id = ? ORDER BY id LIMIT 1')
+                .get(resolvedType, canonicalId)
+            : this.db
+                .prepare('SELECT * FROM entities WHERE canonical_id = ? ORDER BY id LIMIT 1')
+                .get(canonicalId);
+        return row ? mapEntity(row) : null;
+    }
+    getEntitiesByType(type) {
+        const rows = this.db.prepare('SELECT * FROM entities WHERE type = ?').all(type);
+        return rows.map(mapEntity);
+    }
+    getEntitiesBySource(sourcePath) {
+        const rows = this.db
+            .prepare('SELECT * FROM entities WHERE source_path = ?')
+            .all(sourcePath);
+        return rows.map(mapEntity);
+    }
+    deleteEntity(canonicalId, type) {
+        const resolvedType = resolveEntityType(canonicalId, type);
+        const result = resolvedType
+            ? this.db
+                .prepare('DELETE FROM entities WHERE type = ? AND canonical_id = ?')
+                .run(resolvedType, canonicalId)
+            : this.db.prepare('DELETE FROM entities WHERE canonical_id = ?').run(canonicalId);
+        return result.changes > 0;
+    }
+    upsertRelationship(rel) {
+        const now = new Date().toISOString();
+        const metadata = JSON.stringify(rel.metadata ?? {});
+        this.db
+            .prepare(`
+        INSERT INTO relationships (
+          source_id,
+          target_id,
+          relation_type,
+          confidence,
+          metadata,
+          created_at
+        )
+        VALUES (@sourceId, @targetId, @relationType, @confidence, @metadata, @createdAt)
+        ON CONFLICT(source_id, target_id, relation_type) DO UPDATE SET
+          confidence = excluded.confidence,
+          metadata = excluded.metadata
+      `)
+            .run({
+            sourceId: rel.sourceId,
+            targetId: rel.targetId,
+            relationType: rel.relationType,
+            confidence: rel.confidence ?? 1.0,
+            metadata,
+            createdAt: now,
+        });
+        const row = this.db
+            .prepare('SELECT * FROM relationships WHERE source_id = ? AND target_id = ? AND relation_type = ?')
+            .get(rel.sourceId, rel.targetId, rel.relationType);
+        if (!row) {
+            throw new Error(`Failed to upsert relationship: ${rel.sourceId} -> ${rel.targetId} (${rel.relationType})`);
+        }
+        return mapRelationship(row);
+    }
+    getRelationships(entityId, direction) {
+        let rows;
+        if (direction === 'outgoing') {
+            rows = this.db
+                .prepare('SELECT * FROM relationships WHERE source_id = ?')
+                .all(entityId);
+        }
+        else if (direction === 'incoming') {
+            rows = this.db
+                .prepare('SELECT * FROM relationships WHERE target_id = ?')
+                .all(entityId);
+        }
+        else {
+            rows = this.db
+                .prepare('SELECT * FROM relationships WHERE source_id = ? OR target_id = ?')
+                .all(entityId, entityId);
+        }
+        return rows.map(mapRelationship);
+    }
+    getRelationshipsByType(type) {
+        const rows = this.db
+            .prepare('SELECT * FROM relationships WHERE relation_type = ?')
+            .all(type);
+        return rows.map(mapRelationship);
+    }
+    deleteRelationship(sourceId, targetId, type) {
+        const result = this.db
+            .prepare('DELETE FROM relationships WHERE source_id = ? AND target_id = ? AND relation_type = ?')
+            .run(sourceId, targetId, type);
+        return result.changes > 0;
+    }
+    getNeighbors(entityId, relationType) {
+        if (relationType) {
+            const rows = this.db
+                .prepare(`
+          SELECT e.*
+          FROM relationships r
+          JOIN entities e ON e.id = r.target_id
+          WHERE r.source_id = ? AND r.relation_type = ?
+        `)
+                .all(entityId, relationType);
+            return rows.map(mapEntity);
+        }
+        const rows = this.db
+            .prepare(`
+        SELECT e.*
+        FROM relationships r
+        JOIN entities e ON e.id = r.target_id
+        WHERE r.source_id = ?
+      `)
+            .all(entityId);
+        return rows.map(mapEntity);
+    }
+    getPath(fromId, toId, maxDepth, maxPaths = 25) {
+        if (maxDepth < 1) {
+            return null;
+        }
+        const boundedDepth = Math.min(maxDepth, 10);
+        const boundedPaths = Math.max(1, Math.min(maxPaths, 1000));
+        const start = this.getEntityById(fromId);
+        const target = this.getEntityById(toId);
+        if (!start || !target) {
+            return null;
+        }
+        if (fromId === toId) {
+            return [[start]];
+        }
+        const results = [];
+        const queue = [[start]];
+        let head = 0;
+        while (head < queue.length) {
+            const path = queue[head++];
+            if (!path) {
+                continue;
+            }
+            const last = path[path.length - 1];
+            if (!last) {
+                continue;
+            }
+            const depth = path.length - 1;
+            if (depth >= boundedDepth) {
+                continue;
+            }
+            const neighbors = this.getNeighbors(last.id);
+            for (const neighbor of neighbors) {
+                if (path.some((node) => node.id === neighbor.id)) {
+                    continue;
+                }
+                const nextPath = [...path, neighbor];
+                if (neighbor.id === toId) {
+                    results.push(nextPath);
+                    if (results.length >= boundedPaths) {
+                        return results;
+                    }
+                }
+                else {
+                    queue.push(nextPath);
+                }
+            }
+        }
+        return results.length > 0 ? results : null;
+    }
+    bulkUpsertEntities(entities) {
+        if (entities.length === 0) {
+            return 0;
+        }
+        const now = new Date().toISOString();
+        const statement = this.db.prepare(`
+      INSERT INTO entities (
+        type,
+        canonical_id,
+        name,
+        source_path,
+        content_hash,
+        metadata,
+        created_at,
+        updated_at
+      )
+      VALUES (@type, @canonicalId, @name, @sourcePath, @contentHash, @metadata, @createdAt, @updatedAt)
+      ON CONFLICT(type, canonical_id) DO UPDATE SET
+        name = excluded.name,
+        source_path = excluded.source_path,
+        content_hash = excluded.content_hash,
+        metadata = excluded.metadata,
+        updated_at = excluded.updated_at
+    `);
+        const transaction = this.db.transaction((rows) => {
+            let changes = 0;
+            for (const entity of rows) {
+                const result = statement.run({
+                    type: entity.type,
+                    canonicalId: entity.canonicalId,
+                    name: entity.name,
+                    sourcePath: entity.sourcePath ?? null,
+                    contentHash: entity.contentHash ?? null,
+                    metadata: JSON.stringify(entity.metadata ?? {}),
+                    createdAt: normalizeTimestamp(entity.createdAt, now),
+                    updatedAt: normalizeTimestamp(entity.updatedAt, now),
+                });
+                changes += result.changes;
+            }
+            return changes;
+        });
+        return transaction(entities);
+    }
+    bulkUpsertRelationships(rels) {
+        if (rels.length === 0) {
+            return 0;
+        }
+        const now = new Date().toISOString();
+        const statement = this.db.prepare(`
+      INSERT INTO relationships (
+        source_id,
+        target_id,
+        relation_type,
+        confidence,
+        metadata,
+        created_at
+      )
+      VALUES (@sourceId, @targetId, @relationType, @confidence, @metadata, @createdAt)
+      ON CONFLICT(source_id, target_id, relation_type) DO UPDATE SET
+        confidence = excluded.confidence,
+        metadata = excluded.metadata
+    `);
+        const transaction = this.db.transaction((rows) => {
+            let changes = 0;
+            for (const rel of rows) {
+                const result = statement.run({
+                    sourceId: rel.sourceId,
+                    targetId: rel.targetId,
+                    relationType: rel.relationType,
+                    confidence: rel.confidence ?? 1.0,
+                    metadata: JSON.stringify(rel.metadata ?? {}),
+                    createdAt: normalizeTimestamp(rel.createdAt, now),
+                });
+                changes += result.changes;
+            }
+            return changes;
+        });
+        return transaction(rels);
+    }
+    deleteEntitiesBySource(sourcePath) {
+        const result = this.db.prepare('DELETE FROM entities WHERE source_path = ?').run(sourcePath);
+        return result.changes;
+    }
+    getStats() {
+        const entityCounts = {
+            plan: 0,
+            agent: 0,
+            feature: 0,
+            file: 0,
+            tag: 0,
+            concept: 0,
+        };
+        const relationCounts = {
+            CONTAINS: 0,
+            DEPENDS_ON: 0,
+            MODIFIES: 0,
+            IMPLEMENTS: 0,
+            SIMILAR_TO: 0,
+            BLOCKS: 0,
+            TAGGED_WITH: 0,
+        };
+        const entityRows = this.db
+            .prepare('SELECT type, COUNT(*) as count FROM entities GROUP BY type')
+            .all();
+        for (const row of entityRows) {
+            if (ENTITY_TYPES.includes(row.type)) {
+                entityCounts[row.type] = row.count;
+            }
+        }
+        const relationRows = this.db
+            .prepare('SELECT relation_type as type, COUNT(*) as count FROM relationships GROUP BY relation_type')
+            .all();
+        for (const row of relationRows) {
+            if (RELATION_TYPES.includes(row.type)) {
+                relationCounts[row.type] = row.count;
+            }
+        }
+        const totalEntitiesRow = this.db.prepare('SELECT COUNT(*) as count FROM entities').get();
+        const totalRelationsRow = this.db
+            .prepare('SELECT COUNT(*) as count FROM relationships')
+            .get();
+        const lastIndexedRow = this.db
+            .prepare("SELECT value FROM graph_meta WHERE key = 'last_indexed'")
+            .get();
+        return {
+            entityCounts,
+            relationCounts,
+            totalEntities: totalEntitiesRow?.count ?? 0,
+            totalRelations: totalRelationsRow?.count ?? 0,
+            lastIndexed: lastIndexedRow?.value ?? '',
+        };
+    }
+    searchEntities(query, limit) {
+        const safeLimit = Math.max(1, Math.min(limit, 1000));
+        try {
+            const rows = this.db
+                .prepare(`
+          SELECT e.*
+          FROM entities e
+          JOIN entities_fts ON entities_fts.rowid = e.id
+          WHERE entities_fts MATCH ?
+          ORDER BY bm25(entities_fts)
+          LIMIT ?
+        `)
+                .all(query, safeLimit);
+            return rows.map(mapEntity);
+        }
+        catch (error) {
+            const errorMessage = error instanceof Error ? error.message : String(error);
+            console.warn('GraphStorage.searchEntities failed; returning empty results.', {
+                error: errorMessage,
+            });
+            return [];
+        }
+    }
+    getEntityById(id) {
+        const row = this.db.prepare('SELECT * FROM entities WHERE id = ?').get(id);
+        return row ? mapEntity(row) : null;
+    }
+}
+export function computeContentHash(content) {
+    return createHash('sha256').update(content).digest('hex');
+}
+export function hasChanged(storage, sourcePath, currentHash) {
+    const existing = storage.getEntitiesBySource(sourcePath);
+    if (existing.length === 0) {
+        return true;
+    }
+    return existing.some((entity) => !entity.contentHash || entity.contentHash !== currentHash);
+}
+//# sourceMappingURL=storage.js.map

package/dist/graph/storage.js.map

@@ -0,0 +1 @@
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package/dist/graph/types.d.ts

@@ -0,0 +1,32 @@
+export declare const ENTITY_TYPES: readonly ["plan", "agent", "feature", "file", "tag", "concept"];
+export type EntityType = (typeof ENTITY_TYPES)[number];
+export interface Entity {
+    id: number;
+    type: EntityType;
+    canonicalId: string;
+    name: string;
+    sourcePath?: string;
+    contentHash?: string;
+    metadata: Record<string, unknown>;
+    createdAt: string;
+    updatedAt: string;
+}
+export declare const RELATION_TYPES: readonly ["CONTAINS", "DEPENDS_ON", "MODIFIES", "IMPLEMENTS", "SIMILAR_TO", "BLOCKS", "TAGGED_WITH"];
+export type RelationType = (typeof RELATION_TYPES)[number];
+export interface Relationship {
+    id: number;
+    sourceId: number;
+    targetId: number;
+    relationType: RelationType;
+    confidence: number;
+    metadata: Record<string, unknown>;
+    createdAt: string;
+}
+export interface GraphStats {
+    entityCounts: Record<EntityType, number>;
+    relationCounts: Record<RelationType, number>;
+    totalEntities: number;
+    totalRelations: number;
+    lastIndexed: string;
+}
+//# sourceMappingURL=types.d.ts.map

package/dist/graph/types.d.ts.map

@@ -0,0 +1 @@
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