@sjcrh/proteinpaint-types 2.184.0 → 2.185.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/chunk-CWJZUUEF.js +341 -0
- package/dist/{chunk-U4A647KI.js → chunk-DII56MJ7.js} +128 -18
- package/dist/{chunk-M7WMC7GC.js → chunk-JMVDRHBL.js} +187 -61
- package/dist/chunk-NLANDPY7.js +330 -0
- package/dist/chunk-UGGNWTJZ.js +385 -0
- package/dist/{chunk-XIRCL7KT.js → chunk-VCEWZVLZ.js} +24 -30
- package/dist/{chunk-NIEACU6R.js → chunk-Z3IYM5OK.js} +5 -1
- package/dist/genesetEnrichment.js +1 -1
- package/dist/index.js +7 -7
- package/dist/termdb.DE.js +1 -1
- package/dist/termdb.cluster.js +1 -1
- package/dist/termdb.diffMeth.js +1 -1
- package/dist/termdb.singlecellDEgenes.js +1 -1
- package/dist/termdb.singlecellData.js +1 -1
- package/dist/termdb.singlecellSamples.js +1 -1
- package/package.json +1 -1
- package/src/dataset.ts +49 -0
- package/src/routes/genesetEnrichment.ts +27 -10
- package/src/routes/termdb.DE.ts +111 -4
- package/src/routes/termdb.chat2.ts +5 -2
- package/src/routes/termdb.cluster.ts +11 -0
- package/src/routes/termdb.diffMeth.ts +18 -10
- package/src/routes/termdb.singlecellDEgenes.ts +20 -16
- package/src/routes/termdb.singlecellData.ts +2 -0
- package/src/routes/termdb.singlecellSamples.ts +4 -3
- package/dist/chunk-3EVYVWI2.js +0 -163
- package/dist/chunk-G6ZTAMGK.js +0 -155
- package/dist/chunk-LJFPSUAL.js +0 -199
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import {
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__toESM,
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require_lib
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} from "./chunk-YNHC5SXO.js";
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// dist/termdb.diffMeth.ts
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var import_typia = __toESM(require_lib(), 1);
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// src/routes/termdb.diffMeth.ts
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var diffMethPayload = {
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request: {
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typeId: "DiffMethRequest"
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},
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response: {
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typeId: "DiffMethResponse"
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}
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};
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// dist/termdb.diffMeth.ts
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var validDiffMethRequest = (input) => {
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const errors = [];
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const __is = (input2) => {
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const $io0 = (input3) => "string" === typeof input3.genome && "string" === typeof input3.dslabel && true && (void 0 === input3.min_samples_per_group || "number" === typeof input3.min_samples_per_group) && true && true && (void 0 === input3.preAnalysis || "boolean" === typeof input3.preAnalysis) && ("object" === typeof input3.volcanoRender && null !== input3.volcanoRender && $io1(input3.volcanoRender));
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const $io1 = (input3) => "object" === typeof input3.significanceThresholds && null !== input3.significanceThresholds && $io2(input3.significanceThresholds) && "number" === typeof input3.pixelWidth && "number" === typeof input3.pixelHeight && (void 0 === input3.colorSignificant || "string" === typeof input3.colorSignificant) && (void 0 === input3.colorSignificantUp || "string" === typeof input3.colorSignificantUp) && (void 0 === input3.colorSignificantDown || "string" === typeof input3.colorSignificantDown) && (void 0 === input3.colorNonsignificant || "string" === typeof input3.colorNonsignificant) && (void 0 === input3.dotRadius || "number" === typeof input3.dotRadius) && (void 0 === input3.maxInteractiveDots || "number" === typeof input3.maxInteractiveDots);
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const $io2 = (input3) => "number" === typeof input3.pValueCutoff && ("adjusted" === input3.pValueType || "original" === input3.pValueType) && "number" === typeof input3.foldChangeCutoff;
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return "object" === typeof input2 && null !== input2 && $io0(input2);
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};
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if (false === __is(input)) {
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const $report = import_typia.createValidate.report(errors);
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((input2, _path, _exceptionable = true) => {
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const $vo0 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.genome || $report(_exceptionable2, {
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path: _path2 + ".genome",
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expected: "string",
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value: input3.genome
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}), "string" === typeof input3.dslabel || $report(_exceptionable2, {
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path: _path2 + ".dslabel",
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expected: "string",
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value: input3.dslabel
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}), true, void 0 === input3.min_samples_per_group || "number" === typeof input3.min_samples_per_group || $report(_exceptionable2, {
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path: _path2 + ".min_samples_per_group",
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expected: "(number | undefined)",
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value: input3.min_samples_per_group
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}), true, true, void 0 === input3.preAnalysis || "boolean" === typeof input3.preAnalysis || $report(_exceptionable2, {
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path: _path2 + ".preAnalysis",
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expected: "(boolean | undefined)",
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value: input3.preAnalysis
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}), ("object" === typeof input3.volcanoRender && null !== input3.volcanoRender || $report(_exceptionable2, {
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path: _path2 + ".volcanoRender",
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expected: "VolcanoRenderRequest",
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value: input3.volcanoRender
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})) && $vo1(input3.volcanoRender, _path2 + ".volcanoRender", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".volcanoRender",
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expected: "VolcanoRenderRequest",
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value: input3.volcanoRender
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})].every((flag) => flag);
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const $vo1 = (input3, _path2, _exceptionable2 = true) => [("object" === typeof input3.significanceThresholds && null !== input3.significanceThresholds || $report(_exceptionable2, {
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path: _path2 + ".significanceThresholds",
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expected: "SignificanceThresholds",
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value: input3.significanceThresholds
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})) && $vo2(input3.significanceThresholds, _path2 + ".significanceThresholds", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".significanceThresholds",
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expected: "SignificanceThresholds",
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value: input3.significanceThresholds
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}), "number" === typeof input3.pixelWidth || $report(_exceptionable2, {
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path: _path2 + ".pixelWidth",
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expected: "number",
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value: input3.pixelWidth
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}), "number" === typeof input3.pixelHeight || $report(_exceptionable2, {
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path: _path2 + ".pixelHeight",
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expected: "number",
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value: input3.pixelHeight
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}), void 0 === input3.colorSignificant || "string" === typeof input3.colorSignificant || $report(_exceptionable2, {
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path: _path2 + ".colorSignificant",
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expected: "(string | undefined)",
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value: input3.colorSignificant
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}), void 0 === input3.colorSignificantUp || "string" === typeof input3.colorSignificantUp || $report(_exceptionable2, {
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path: _path2 + ".colorSignificantUp",
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expected: "(string | undefined)",
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value: input3.colorSignificantUp
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}), void 0 === input3.colorSignificantDown || "string" === typeof input3.colorSignificantDown || $report(_exceptionable2, {
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path: _path2 + ".colorSignificantDown",
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expected: "(string | undefined)",
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value: input3.colorSignificantDown
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}), void 0 === input3.colorNonsignificant || "string" === typeof input3.colorNonsignificant || $report(_exceptionable2, {
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path: _path2 + ".colorNonsignificant",
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expected: "(string | undefined)",
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value: input3.colorNonsignificant
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}), void 0 === input3.dotRadius || "number" === typeof input3.dotRadius || $report(_exceptionable2, {
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path: _path2 + ".dotRadius",
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expected: "(number | undefined)",
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value: input3.dotRadius
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}), void 0 === input3.maxInteractiveDots || "number" === typeof input3.maxInteractiveDots || $report(_exceptionable2, {
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path: _path2 + ".maxInteractiveDots",
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expected: "(number | undefined)",
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value: input3.maxInteractiveDots
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})].every((flag) => flag);
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const $vo2 = (input3, _path2, _exceptionable2 = true) => ["number" === typeof input3.pValueCutoff || $report(_exceptionable2, {
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path: _path2 + ".pValueCutoff",
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expected: "number",
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value: input3.pValueCutoff
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}), "adjusted" === input3.pValueType || "original" === input3.pValueType || $report(_exceptionable2, {
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path: _path2 + ".pValueType",
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expected: '("adjusted" | "original")',
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value: input3.pValueType
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}), "number" === typeof input3.foldChangeCutoff || $report(_exceptionable2, {
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path: _path2 + ".foldChangeCutoff",
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expected: "number",
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value: input3.foldChangeCutoff
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})].every((flag) => flag);
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return ("object" === typeof input2 && null !== input2 || $report(true, {
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path: _path + "",
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expected: "DiffMethRequest",
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value: input2
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})) && $vo0(input2, _path + "", true) || $report(true, {
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path: _path + "",
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expected: "DiffMethRequest",
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value: input2
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});
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})(input, "$input", true);
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}
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const success = 0 === errors.length;
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return {
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success,
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errors,
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data: success ? input : void 0
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};
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};
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var validDiffMethResponse = (input) => {
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const errors = [];
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const __is = (input2) => {
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const $join = import_typia.createValidate.join;
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const $io0 = (input3) => "object" === typeof input3.data && null !== input3.data && false === Array.isArray(input3.data) && $io1(input3.data);
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const $io1 = (input3) => Object.keys(input3).every((key) => {
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const value = input3[key];
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if (void 0 === value)
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return true;
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if (RegExp(/(.*)/).test(key))
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return "string" === typeof value || "number" === typeof value;
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return true;
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});
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const $io2 = (input3) => "object" === typeof input3.data && null !== input3.data && $io3(input3.data) && "number" === typeof input3.sample_size1 && "number" === typeof input3.sample_size2;
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const $io3 = (input3) => Array.isArray(input3.dots) && input3.dots.every((elem) => "object" === typeof elem && null !== elem && $io4(elem)) && "string" === typeof input3.volcanoPng && ("object" === typeof input3.plotExtent && null !== input3.plotExtent && $io5(input3.plotExtent)) && "number" === typeof input3.totalRows && "number" === typeof input3.totalSignificantRows && (void 0 === input3.cacheId || "string" === typeof input3.cacheId);
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const $io4 = (input3) => "number" === typeof input3.original_p_value && "number" === typeof input3.adjusted_p_value && "number" === typeof input3.fold_change && "string" === typeof input3.promoter_id && "string" === typeof input3.gene_name && "string" === typeof input3.chr && "number" === typeof input3.start && "number" === typeof input3.stop;
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const $io5 = (input3) => "number" === typeof input3.xMin && "number" === typeof input3.xMax && "number" === typeof input3.yMin && "number" === typeof input3.yMax && "number" === typeof input3.pixelWidth && "number" === typeof input3.pixelHeight && "number" === typeof input3.plotLeft && "number" === typeof input3.plotTop && "number" === typeof input3.plotRight && "number" === typeof input3.plotBottom && "number" === typeof input3.minNonZeroPValue;
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const $iu0 = (input3) => (() => {
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if (void 0 !== input3.sample_size1)
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return $io2(input3);
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return $io0(input3);
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})();
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return "object" === typeof input2 && null !== input2 && $iu0(input2);
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};
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if (false === __is(input)) {
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const $report = import_typia.createValidate.report(errors);
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((input2, _path, _exceptionable = true) => {
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const $join = import_typia.createValidate.join;
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const $vo0 = (input3, _path2, _exceptionable2 = true) => [("object" === typeof input3.data && null !== input3.data && false === Array.isArray(input3.data) || $report(_exceptionable2, {
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path: _path2 + ".data",
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expected: "Record<string, string | number>",
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value: input3.data
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})) && $vo1(input3.data, _path2 + ".data", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".data",
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expected: "Record<string, string | number>",
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value: input3.data
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})].every((flag) => flag);
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const $vo1 = (input3, _path2, _exceptionable2 = true) => [false === _exceptionable2 || Object.keys(input3).map((key) => {
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const value = input3[key];
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if (void 0 === value)
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return true;
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if (RegExp(/(.*)/).test(key))
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return "string" === typeof value || "number" === typeof value || $report(_exceptionable2, {
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path: _path2 + $join(key),
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expected: "(number | string)",
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value
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});
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return true;
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}).every((flag) => flag)].every((flag) => flag);
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const $vo2 = (input3, _path2, _exceptionable2 = true) => [("object" === typeof input3.data && null !== input3.data || $report(_exceptionable2, {
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path: _path2 + ".data",
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expected: "VolcanoData<DiffMethEntry>",
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value: input3.data
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})) && $vo3(input3.data, _path2 + ".data", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".data",
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expected: "VolcanoData<DiffMethEntry>",
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value: input3.data
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}), "number" === typeof input3.sample_size1 || $report(_exceptionable2, {
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path: _path2 + ".sample_size1",
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expected: "number",
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value: input3.sample_size1
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}), "number" === typeof input3.sample_size2 || $report(_exceptionable2, {
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path: _path2 + ".sample_size2",
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expected: "number",
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value: input3.sample_size2
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})].every((flag) => flag);
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const $vo3 = (input3, _path2, _exceptionable2 = true) => [(Array.isArray(input3.dots) || $report(_exceptionable2, {
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path: _path2 + ".dots",
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expected: "Array<DiffMethEntry>",
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value: input3.dots
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})) && input3.dots.map((elem, _index1) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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path: _path2 + ".dots[" + _index1 + "]",
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expected: "DiffMethEntry",
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value: elem
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})) && $vo4(elem, _path2 + ".dots[" + _index1 + "]", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".dots[" + _index1 + "]",
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expected: "DiffMethEntry",
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value: elem
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})).every((flag) => flag) || $report(_exceptionable2, {
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path: _path2 + ".dots",
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expected: "Array<DiffMethEntry>",
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value: input3.dots
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}), "string" === typeof input3.volcanoPng || $report(_exceptionable2, {
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path: _path2 + ".volcanoPng",
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expected: "string",
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value: input3.volcanoPng
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}), ("object" === typeof input3.plotExtent && null !== input3.plotExtent || $report(_exceptionable2, {
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path: _path2 + ".plotExtent",
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expected: "PlotExtent",
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value: input3.plotExtent
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})) && $vo5(input3.plotExtent, _path2 + ".plotExtent", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".plotExtent",
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expected: "PlotExtent",
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value: input3.plotExtent
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}), "number" === typeof input3.totalRows || $report(_exceptionable2, {
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path: _path2 + ".totalRows",
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expected: "number",
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value: input3.totalRows
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}), "number" === typeof input3.totalSignificantRows || $report(_exceptionable2, {
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path: _path2 + ".totalSignificantRows",
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expected: "number",
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value: input3.totalSignificantRows
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}), void 0 === input3.cacheId || "string" === typeof input3.cacheId || $report(_exceptionable2, {
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})].every((flag) => flag);
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}), "number" === typeof input3.fold_change || $report(_exceptionable2, {
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}), "string" === typeof input3.promoter_id || $report(_exceptionable2, {
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})].every((flag) => flag);
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}), "number" === typeof input3.pixelWidth || $report(_exceptionable2, {
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value: input3.pixelWidth
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}), "number" === typeof input3.pixelHeight || $report(_exceptionable2, {
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value: input3.pixelHeight
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}), "number" === typeof input3.plotLeft || $report(_exceptionable2, {
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}), "number" === typeof input3.plotTop || $report(_exceptionable2, {
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}), "number" === typeof input3.plotRight || $report(_exceptionable2, {
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}), "number" === typeof input3.plotBottom || $report(_exceptionable2, {
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value: input3.plotBottom
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}), "number" === typeof input3.minNonZeroPValue || $report(_exceptionable2, {
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})].every((flag) => flag);
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})();
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return ("object" === typeof input2 && null !== input2 || $report(true, {
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expected: "(DiffMethFullResponse | DiffMethPreAnalysisResponse)",
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value: input2
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})) && $vu0(input2, _path + "", true) || $report(true, {
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path: _path + "",
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expected: "(DiffMethFullResponse | DiffMethPreAnalysisResponse)",
|
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value: input2
|
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});
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})(input, "$input", true);
|
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}
|
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const success = 0 === errors.length;
|
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return {
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success,
|
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errors,
|
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data: success ? input : void 0
|
|
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|
+
};
|
|
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|
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};
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+
|
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|
+
export {
|
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+
diffMethPayload,
|
|
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|
+
validDiffMethRequest,
|
|
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+
validDiffMethResponse
|
|
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|
+
};
|
|
@@ -21,15 +21,18 @@ var genesetEnrichmentPayload = {
|
|
|
21
21
|
var validGenesetEnrichmentRequest = (input) => {
|
|
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22
|
const errors = [];
|
|
23
23
|
const __is = (input2) => {
|
|
24
|
-
const $io0 = (input3) => Array.isArray(input3.genes) && input3.genes.every((elem) => "string" === typeof elem) && (Array.isArray(input3.fold_change) && input3.fold_change.every((elem) => "number" === typeof elem)) && "
|
|
24
|
+
const $io0 = (input3) => (void 0 === input3.genes || Array.isArray(input3.genes) && input3.genes.every((elem) => "string" === typeof elem)) && (void 0 === input3.fold_change || Array.isArray(input3.fold_change) && input3.fold_change.every((elem) => "number" === typeof elem)) && (void 0 === input3.cacheId || "string" === typeof input3.cacheId) && (void 0 === input3.dslabel || "string" === typeof input3.dslabel) && (void 0 === input3.daRequest || "object" === typeof input3.daRequest && null !== input3.daRequest && $io1(input3.daRequest)) && (void 0 === input3.fetchDE || "boolean" === typeof input3.fetchDE) && "boolean" === typeof input3.filter_non_coding_genes && "string" === typeof input3.genome && "string" === typeof input3.geneSetGroup && (void 0 === input3.geneset_name || "string" === typeof input3.geneset_name) && (void 0 === input3.num_permutations || "number" === typeof input3.num_permutations) && ("blitzgsea" === input3.method || "cerno" === input3.method);
|
|
25
|
+
const $io1 = (input3) => (void 0 === input3.genome || "string" === typeof input3.genome) && (void 0 === input3.dslabel || "string" === typeof input3.dslabel) && true && (void 0 === input3.min_count || "number" === typeof input3.min_count) && (void 0 === input3.min_total_count || "number" === typeof input3.min_total_count) && (void 0 === input3.cpm_cutoff || "number" === typeof input3.cpm_cutoff) && (void 0 === input3.storage_type || "text" === input3.storage_type || "HDF5" === input3.storage_type) && (void 0 === input3.method || "string" === typeof input3.method) && true && true && (void 0 === input3.preAnalysis || "boolean" === typeof input3.preAnalysis) && (void 0 === input3.volcanoRender || "object" === typeof input3.volcanoRender && null !== input3.volcanoRender && $io2(input3.volcanoRender));
|
|
26
|
+
const $io2 = (input3) => "object" === typeof input3.significanceThresholds && null !== input3.significanceThresholds && $io3(input3.significanceThresholds) && "number" === typeof input3.pixelWidth && "number" === typeof input3.pixelHeight && (void 0 === input3.colorSignificant || "string" === typeof input3.colorSignificant) && (void 0 === input3.colorSignificantUp || "string" === typeof input3.colorSignificantUp) && (void 0 === input3.colorSignificantDown || "string" === typeof input3.colorSignificantDown) && (void 0 === input3.colorNonsignificant || "string" === typeof input3.colorNonsignificant) && (void 0 === input3.dotRadius || "number" === typeof input3.dotRadius) && (void 0 === input3.maxInteractiveDots || "number" === typeof input3.maxInteractiveDots);
|
|
27
|
+
const $io3 = (input3) => "number" === typeof input3.pValueCutoff && ("adjusted" === input3.pValueType || "original" === input3.pValueType) && "number" === typeof input3.foldChangeCutoff;
|
|
25
28
|
return "object" === typeof input2 && null !== input2 && $io0(input2);
|
|
26
29
|
};
|
|
27
30
|
if (false === __is(input)) {
|
|
28
31
|
const $report = import_typia.createValidate.report(errors);
|
|
29
32
|
((input2, _path, _exceptionable = true) => {
|
|
30
|
-
const $vo0 = (input3, _path2, _exceptionable2 = true) => [(Array.isArray(input3.genes) || $report(_exceptionable2, {
|
|
33
|
+
const $vo0 = (input3, _path2, _exceptionable2 = true) => [void 0 === input3.genes || (Array.isArray(input3.genes) || $report(_exceptionable2, {
|
|
31
34
|
path: _path2 + ".genes",
|
|
32
|
-
expected: "Array<string>",
|
|
35
|
+
expected: "(Array<string> | undefined)",
|
|
33
36
|
value: input3.genes
|
|
34
37
|
})) && input3.genes.map((elem, _index1) => "string" === typeof elem || $report(_exceptionable2, {
|
|
35
38
|
path: _path2 + ".genes[" + _index1 + "]",
|
|
@@ -37,11 +40,11 @@ var validGenesetEnrichmentRequest = (input) => {
|
|
|
37
40
|
value: elem
|
|
38
41
|
})).every((flag) => flag) || $report(_exceptionable2, {
|
|
39
42
|
path: _path2 + ".genes",
|
|
40
|
-
expected: "Array<string>",
|
|
43
|
+
expected: "(Array<string> | undefined)",
|
|
41
44
|
value: input3.genes
|
|
42
|
-
}), (Array.isArray(input3.fold_change) || $report(_exceptionable2, {
|
|
45
|
+
}), void 0 === input3.fold_change || (Array.isArray(input3.fold_change) || $report(_exceptionable2, {
|
|
43
46
|
path: _path2 + ".fold_change",
|
|
44
|
-
expected: "Array<number>",
|
|
47
|
+
expected: "(Array<number> | undefined)",
|
|
45
48
|
value: input3.fold_change
|
|
46
49
|
})) && input3.fold_change.map((elem, _index2) => "number" === typeof elem || $report(_exceptionable2, {
|
|
47
50
|
path: _path2 + ".fold_change[" + _index2 + "]",
|
|
@@ -49,8 +52,28 @@ var validGenesetEnrichmentRequest = (input) => {
|
|
|
49
52
|
value: elem
|
|
50
53
|
})).every((flag) => flag) || $report(_exceptionable2, {
|
|
51
54
|
path: _path2 + ".fold_change",
|
|
52
|
-
expected: "Array<number>",
|
|
55
|
+
expected: "(Array<number> | undefined)",
|
|
53
56
|
value: input3.fold_change
|
|
57
|
+
}), void 0 === input3.cacheId || "string" === typeof input3.cacheId || $report(_exceptionable2, {
|
|
58
|
+
path: _path2 + ".cacheId",
|
|
59
|
+
expected: "(string | undefined)",
|
|
60
|
+
value: input3.cacheId
|
|
61
|
+
}), void 0 === input3.dslabel || "string" === typeof input3.dslabel || $report(_exceptionable2, {
|
|
62
|
+
path: _path2 + ".dslabel",
|
|
63
|
+
expected: "(string | undefined)",
|
|
64
|
+
value: input3.dslabel
|
|
65
|
+
}), void 0 === input3.daRequest || ("object" === typeof input3.daRequest && null !== input3.daRequest || $report(_exceptionable2, {
|
|
66
|
+
path: _path2 + ".daRequest",
|
|
67
|
+
expected: "(Partial<DERequest> | undefined)",
|
|
68
|
+
value: input3.daRequest
|
|
69
|
+
})) && $vo1(input3.daRequest, _path2 + ".daRequest", _exceptionable2) || $report(_exceptionable2, {
|
|
70
|
+
path: _path2 + ".daRequest",
|
|
71
|
+
expected: "(Partial<DERequest> | undefined)",
|
|
72
|
+
value: input3.daRequest
|
|
73
|
+
}), void 0 === input3.fetchDE || "boolean" === typeof input3.fetchDE || $report(_exceptionable2, {
|
|
74
|
+
path: _path2 + ".fetchDE",
|
|
75
|
+
expected: "(boolean | undefined)",
|
|
76
|
+
value: input3.fetchDE
|
|
54
77
|
}), "boolean" === typeof input3.filter_non_coding_genes || $report(_exceptionable2, {
|
|
55
78
|
path: _path2 + ".filter_non_coding_genes",
|
|
56
79
|
expected: "boolean",
|
|
@@ -67,19 +90,110 @@ var validGenesetEnrichmentRequest = (input) => {
|
|
|
67
90
|
path: _path2 + ".geneset_name",
|
|
68
91
|
expected: "(string | undefined)",
|
|
69
92
|
value: input3.geneset_name
|
|
70
|
-
}), void 0 === input3.
|
|
71
|
-
path: _path2 + ".pickle_file",
|
|
72
|
-
expected: "(string | undefined)",
|
|
73
|
-
value: input3.pickle_file
|
|
74
|
-
}), "number" === typeof input3.num_permutations || $report(_exceptionable2, {
|
|
93
|
+
}), void 0 === input3.num_permutations || "number" === typeof input3.num_permutations || $report(_exceptionable2, {
|
|
75
94
|
path: _path2 + ".num_permutations",
|
|
76
|
-
expected: "number",
|
|
95
|
+
expected: "(number | undefined)",
|
|
77
96
|
value: input3.num_permutations
|
|
78
97
|
}), "blitzgsea" === input3.method || "cerno" === input3.method || $report(_exceptionable2, {
|
|
79
98
|
path: _path2 + ".method",
|
|
80
99
|
expected: '("blitzgsea" | "cerno")',
|
|
81
100
|
value: input3.method
|
|
82
101
|
})].every((flag) => flag);
|
|
102
|
+
const $vo1 = (input3, _path2, _exceptionable2 = true) => [void 0 === input3.genome || "string" === typeof input3.genome || $report(_exceptionable2, {
|
|
103
|
+
path: _path2 + ".genome",
|
|
104
|
+
expected: "(string | undefined)",
|
|
105
|
+
value: input3.genome
|
|
106
|
+
}), void 0 === input3.dslabel || "string" === typeof input3.dslabel || $report(_exceptionable2, {
|
|
107
|
+
path: _path2 + ".dslabel",
|
|
108
|
+
expected: "(string | undefined)",
|
|
109
|
+
value: input3.dslabel
|
|
110
|
+
}), true, void 0 === input3.min_count || "number" === typeof input3.min_count || $report(_exceptionable2, {
|
|
111
|
+
path: _path2 + ".min_count",
|
|
112
|
+
expected: "(number | undefined)",
|
|
113
|
+
value: input3.min_count
|
|
114
|
+
}), void 0 === input3.min_total_count || "number" === typeof input3.min_total_count || $report(_exceptionable2, {
|
|
115
|
+
path: _path2 + ".min_total_count",
|
|
116
|
+
expected: "(number | undefined)",
|
|
117
|
+
value: input3.min_total_count
|
|
118
|
+
}), void 0 === input3.cpm_cutoff || "number" === typeof input3.cpm_cutoff || $report(_exceptionable2, {
|
|
119
|
+
path: _path2 + ".cpm_cutoff",
|
|
120
|
+
expected: "(number | undefined)",
|
|
121
|
+
value: input3.cpm_cutoff
|
|
122
|
+
}), void 0 === input3.storage_type || "text" === input3.storage_type || "HDF5" === input3.storage_type || $report(_exceptionable2, {
|
|
123
|
+
path: _path2 + ".storage_type",
|
|
124
|
+
expected: '("HDF5" | "text" | undefined)',
|
|
125
|
+
value: input3.storage_type
|
|
126
|
+
}), void 0 === input3.method || "string" === typeof input3.method || $report(_exceptionable2, {
|
|
127
|
+
path: _path2 + ".method",
|
|
128
|
+
expected: "(string | undefined)",
|
|
129
|
+
value: input3.method
|
|
130
|
+
}), true, true, void 0 === input3.preAnalysis || "boolean" === typeof input3.preAnalysis || $report(_exceptionable2, {
|
|
131
|
+
path: _path2 + ".preAnalysis",
|
|
132
|
+
expected: "(boolean | undefined)",
|
|
133
|
+
value: input3.preAnalysis
|
|
134
|
+
}), void 0 === input3.volcanoRender || ("object" === typeof input3.volcanoRender && null !== input3.volcanoRender || $report(_exceptionable2, {
|
|
135
|
+
path: _path2 + ".volcanoRender",
|
|
136
|
+
expected: "(VolcanoRenderRequest | undefined)",
|
|
137
|
+
value: input3.volcanoRender
|
|
138
|
+
})) && $vo2(input3.volcanoRender, _path2 + ".volcanoRender", _exceptionable2) || $report(_exceptionable2, {
|
|
139
|
+
path: _path2 + ".volcanoRender",
|
|
140
|
+
expected: "(VolcanoRenderRequest | undefined)",
|
|
141
|
+
value: input3.volcanoRender
|
|
142
|
+
})].every((flag) => flag);
|
|
143
|
+
const $vo2 = (input3, _path2, _exceptionable2 = true) => [("object" === typeof input3.significanceThresholds && null !== input3.significanceThresholds || $report(_exceptionable2, {
|
|
144
|
+
path: _path2 + ".significanceThresholds",
|
|
145
|
+
expected: "SignificanceThresholds",
|
|
146
|
+
value: input3.significanceThresholds
|
|
147
|
+
})) && $vo3(input3.significanceThresholds, _path2 + ".significanceThresholds", _exceptionable2) || $report(_exceptionable2, {
|
|
148
|
+
path: _path2 + ".significanceThresholds",
|
|
149
|
+
expected: "SignificanceThresholds",
|
|
150
|
+
value: input3.significanceThresholds
|
|
151
|
+
}), "number" === typeof input3.pixelWidth || $report(_exceptionable2, {
|
|
152
|
+
path: _path2 + ".pixelWidth",
|
|
153
|
+
expected: "number",
|
|
154
|
+
value: input3.pixelWidth
|
|
155
|
+
}), "number" === typeof input3.pixelHeight || $report(_exceptionable2, {
|
|
156
|
+
path: _path2 + ".pixelHeight",
|
|
157
|
+
expected: "number",
|
|
158
|
+
value: input3.pixelHeight
|
|
159
|
+
}), void 0 === input3.colorSignificant || "string" === typeof input3.colorSignificant || $report(_exceptionable2, {
|
|
160
|
+
path: _path2 + ".colorSignificant",
|
|
161
|
+
expected: "(string | undefined)",
|
|
162
|
+
value: input3.colorSignificant
|
|
163
|
+
}), void 0 === input3.colorSignificantUp || "string" === typeof input3.colorSignificantUp || $report(_exceptionable2, {
|
|
164
|
+
path: _path2 + ".colorSignificantUp",
|
|
165
|
+
expected: "(string | undefined)",
|
|
166
|
+
value: input3.colorSignificantUp
|
|
167
|
+
}), void 0 === input3.colorSignificantDown || "string" === typeof input3.colorSignificantDown || $report(_exceptionable2, {
|
|
168
|
+
path: _path2 + ".colorSignificantDown",
|
|
169
|
+
expected: "(string | undefined)",
|
|
170
|
+
value: input3.colorSignificantDown
|
|
171
|
+
}), void 0 === input3.colorNonsignificant || "string" === typeof input3.colorNonsignificant || $report(_exceptionable2, {
|
|
172
|
+
path: _path2 + ".colorNonsignificant",
|
|
173
|
+
expected: "(string | undefined)",
|
|
174
|
+
value: input3.colorNonsignificant
|
|
175
|
+
}), void 0 === input3.dotRadius || "number" === typeof input3.dotRadius || $report(_exceptionable2, {
|
|
176
|
+
path: _path2 + ".dotRadius",
|
|
177
|
+
expected: "(number | undefined)",
|
|
178
|
+
value: input3.dotRadius
|
|
179
|
+
}), void 0 === input3.maxInteractiveDots || "number" === typeof input3.maxInteractiveDots || $report(_exceptionable2, {
|
|
180
|
+
path: _path2 + ".maxInteractiveDots",
|
|
181
|
+
expected: "(number | undefined)",
|
|
182
|
+
value: input3.maxInteractiveDots
|
|
183
|
+
})].every((flag) => flag);
|
|
184
|
+
const $vo3 = (input3, _path2, _exceptionable2 = true) => ["number" === typeof input3.pValueCutoff || $report(_exceptionable2, {
|
|
185
|
+
path: _path2 + ".pValueCutoff",
|
|
186
|
+
expected: "number",
|
|
187
|
+
value: input3.pValueCutoff
|
|
188
|
+
}), "adjusted" === input3.pValueType || "original" === input3.pValueType || $report(_exceptionable2, {
|
|
189
|
+
path: _path2 + ".pValueType",
|
|
190
|
+
expected: '("adjusted" | "original")',
|
|
191
|
+
value: input3.pValueType
|
|
192
|
+
}), "number" === typeof input3.foldChangeCutoff || $report(_exceptionable2, {
|
|
193
|
+
path: _path2 + ".foldChangeCutoff",
|
|
194
|
+
expected: "number",
|
|
195
|
+
value: input3.foldChangeCutoff
|
|
196
|
+
})].every((flag) => flag);
|
|
83
197
|
return ("object" === typeof input2 && null !== input2 || $report(true, {
|
|
84
198
|
path: _path + "",
|
|
85
199
|
expected: "GenesetEnrichmentRequest",
|
|
@@ -104,7 +218,7 @@ var validGenesetEnrichmentResponse = (input) => {
|
|
|
104
218
|
const $join = import_typia.createValidate.join;
|
|
105
219
|
const $io0 = (input3) => "object" === typeof input3.data && null !== input3.data && $iu0(input3.data);
|
|
106
220
|
const $io1 = (input3) => null !== input3.pathway && void 0 !== input3.pathway && ("string" === typeof input3.pathway || "object" === typeof input3.pathway && null !== input3.pathway && $io2(input3.pathway));
|
|
107
|
-
const $io2 = (input3) => Array.isArray(input3.data) && input3.data.every((elem) => "object" === typeof elem && null !== elem && false === Array.isArray(elem) && $io3(elem))
|
|
221
|
+
const $io2 = (input3) => Array.isArray(input3.data) && input3.data.every((elem) => "object" === typeof elem && null !== elem && false === Array.isArray(elem) && $io3(elem));
|
|
108
222
|
const $io3 = (input3) => Object.keys(input3).every((key) => {
|
|
109
223
|
const value = input3[key];
|
|
110
224
|
if (void 0 === value)
|
|
@@ -177,10 +291,6 @@ var validGenesetEnrichmentResponse = (input) => {
|
|
|
177
291
|
path: _path2 + ".data",
|
|
178
292
|
expected: "Array<blitzgsea_map>",
|
|
179
293
|
value: input3.data
|
|
180
|
-
}), "string" === typeof input3.pickle_file || $report(_exceptionable2, {
|
|
181
|
-
path: _path2 + ".pickle_file",
|
|
182
|
-
expected: "string",
|
|
183
|
-
value: input3.pickle_file
|
|
184
294
|
})].every((flag) => flag);
|
|
185
295
|
const $vo3 = (input3, _path2, _exceptionable2 = true) => [false === _exceptionable2 || Object.keys(input3).map((key) => {
|
|
186
296
|
const value = input3[key];
|