@sjcrh/proteinpaint-types 2.124.0 → 2.126.0

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Files changed (45) hide show
  1. package/dist/brainImaging.js +1 -1
  2. package/dist/{chunk-NCFUZ5VV.js → chunk-2S4T3WUF.js} +790 -386
  3. package/dist/{chunk-XPOHYEAY.js → chunk-537XOM43.js} +584 -382
  4. package/dist/{chunk-LBGUOJR3.js → chunk-5O422YU6.js} +343 -141
  5. package/dist/{chunk-SQBZAOWB.js → chunk-7IRM7OKB.js} +343 -141
  6. package/dist/{chunk-XZAH6P4D.js → chunk-A3XJW6BZ.js} +5 -1
  7. package/dist/{chunk-3ZT4UCFM.js → chunk-BXPSDGWG.js} +343 -141
  8. package/dist/{chunk-QMWUUGEK.js → chunk-CJC7ZHSZ.js} +376 -174
  9. package/dist/{chunk-F64WJMRL.js → chunk-DJCPG2RT.js} +817 -413
  10. package/dist/{chunk-ZMOSABYP.js → chunk-GZCIY2WK.js} +584 -382
  11. package/dist/{chunk-K7P6C6KU.js → chunk-LVXO4MLR.js} +586 -384
  12. package/dist/chunk-NWEXA2YB.js +308 -0
  13. package/dist/{chunk-AGSW7G4T.js → chunk-O4RAE6UJ.js} +582 -380
  14. package/dist/chunk-RPX4TVMD.js +14 -0
  15. package/dist/{chunk-KRYTJ2SL.js → chunk-RWMZSRX7.js} +2 -2
  16. package/dist/chunk-SMS3Y2XZ.js +75 -0
  17. package/dist/{chunk-RX5EB2HL.js → chunk-VSNV3MLV.js} +343 -141
  18. package/dist/{chunk-5HL5BPE5.js → chunk-W6NLM363.js} +2 -2
  19. package/dist/{chunk-WQGLAGSY.js → chunk-YGX6BZZY.js} +4 -4
  20. package/dist/{chunk-5XRJ5ATE.js → chunk-YOS2YTCE.js} +584 -382
  21. package/dist/clearwsisession.js +3 -13
  22. package/dist/clearwsisessions.js +13 -0
  23. package/dist/correlationVolcano.js +1 -1
  24. package/dist/gdc.grin2.js +17 -0
  25. package/dist/genesetEnrichment.js +1 -1
  26. package/dist/healthcheck.js +1 -1
  27. package/dist/index.js +89 -65
  28. package/dist/termdb.boxplot.js +1 -1
  29. package/dist/termdb.categories.js +1 -1
  30. package/dist/termdb.cluster.js +1 -1
  31. package/dist/termdb.descrstats.js +1 -1
  32. package/dist/termdb.numericcategories.js +1 -1
  33. package/dist/termdb.percentile.js +1 -1
  34. package/dist/termdb.termsbyids.js +1 -1
  35. package/dist/termdb.topMutatedGenes.js +5 -5
  36. package/dist/termdb.topTermsByType.js +1 -1
  37. package/dist/termdb.topVariablyExpressedGenes.js +1 -1
  38. package/dist/termdb.violin.js +1 -1
  39. package/dist/wsisamples.js +3 -3
  40. package/package.json +1 -1
  41. package/src/dataset.ts +6 -0
  42. package/src/index.ts +1 -0
  43. package/src/routes/gdc.grin2.ts +101 -0
  44. package/src/routes/genesetEnrichment.ts +2 -0
  45. package/src/terms/geneVariant.ts +1 -0
package/dist/{chunk-XZAH6P4D.js → chunk-A3XJW6BZ.js} RENAMED
@@ -21,7 +21,7 @@ var genesetEnrichmentPayload = {
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  var validGenesetEnrichmentRequest = (input) => {
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  const errors = [];
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  const __is = (input2) => {
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- const $io0 = (input3) => Array.isArray(input3.genes) && input3.genes.every((elem) => "string" === typeof elem) && (Array.isArray(input3.fold_change) && input3.fold_change.every((elem) => "number" === typeof elem)) && "boolean" === typeof input3.filter_non_coding_genes && "string" === typeof input3.genome && "string" === typeof input3.geneSetGroup && (void 0 === input3.geneset_name || "string" === typeof input3.geneset_name) && (void 0 === input3.pickle_file || "string" === typeof input3.pickle_file) && "number" === typeof input3.num_permutations;
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+ const $io0 = (input3) => Array.isArray(input3.genes) && input3.genes.every((elem) => "string" === typeof elem) && (Array.isArray(input3.fold_change) && input3.fold_change.every((elem) => "number" === typeof elem)) && "boolean" === typeof input3.filter_non_coding_genes && "string" === typeof input3.genome && "string" === typeof input3.geneSetGroup && (void 0 === input3.geneset_name || "string" === typeof input3.geneset_name) && (void 0 === input3.pickle_file || "string" === typeof input3.pickle_file) && "number" === typeof input3.num_permutations && ("blitzgsea" === input3.method || "cerno" === input3.method);
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  return "object" === typeof input2 && null !== input2 && $io0(input2);
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  };
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  if (false === __is(input)) {
@@ -75,6 +75,10 @@ var validGenesetEnrichmentRequest = (input) => {
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  path: _path2 + ".num_permutations",
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  expected: "number",
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  value: input3.num_permutations
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+ }), "blitzgsea" === input3.method || "cerno" === input3.method || $report(_exceptionable2, {
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+ path: _path2 + ".method",
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+ expected: '("blitzgsea" | "cerno")',
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+ value: input3.method
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  })].every((flag) => flag);
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  return ("object" === typeof input2 && null !== input2 || $report(true, {
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  path: _path + "",