@sjcrh/proteinpaint-server 2.182.0 → 2.182.2

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Files changed (10) hide show
  1. package/genome/hg38.base.js +492 -0
  2. package/genome/hg38.js +2 -487
  3. package/genome/hg38.mmrf.js +13 -0
  4. package/package.json +4 -4
  5. package/routes/profile.polar2.js +1 -1
  6. package/routes/termdb.proteome.js +400 -0
  7. package/routes/termdb.singlecellSamples.js +8 -4
  8. package/routes/termdb.violinBox.js +137 -88
  9. package/src/app.js +4702 -4288
  10. package/src/mds3.gdc.filter.js +1 -0
package/src/mds3.gdc.filter.js CHANGED
@@ -25,6 +25,7 @@ export function filter2GDCfilter(f, level = 0) {
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  if (!item.tvs) throw new Error('item.tvs missing')
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  if (!item.tvs.term) throw new Error('item.tvs.term missing')
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  if (dtTermTypes.has(item.tvs.term.type)) {
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+ if (level > 0) throw new Error(`geneVariant filters are only supported at the root level of a nested filter`)
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  // geneVariant/dt term filtering will be performed during post-processing
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  // (see mayFilterByGeneVariant() in server/src/mds3.init.js)
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  continue