@sjcrh/proteinpaint-client 2.211.0 → 2.212.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/2dmaf-R23YQDZC.js +1367 -0
- package/dist/AggMatrixInput-4DIGZZN4.js +406 -0
- package/dist/AggregateMatrix-TF6XXFUN.js +41 -0
- package/dist/AppHeader-JB5HPAOQ.js +830 -0
- package/dist/BoxPlot-47TUXQDP.js +1208 -0
- package/dist/CorrelationVolcano-G7K5JEPM.js +617 -0
- package/dist/Cuminc-LBXPOENU.js +1220 -0
- package/dist/Cuminc-LBXPOENU.js.map +7 -0
- package/dist/DE-JSWA6HXV.js +89 -0
- package/dist/DEinput-LEYRVYK6.js +501 -0
- package/dist/DM-332QECUP.js +90 -0
- package/dist/DifferentialAnalysis-JGH2OMTH.js +239 -0
- package/dist/Disco-36PJXFM6.js +3389 -0
- package/dist/Disco.UI-PY2KOGKY.js +243 -0
- package/dist/DmrPlot-5WMOBZOJ.js +362 -0
- package/dist/GB-6WWLTBIW.js +1392 -0
- package/dist/GSEA-GYUVO2XA.js +875 -0
- package/dist/GeneExpInput-UABEICGS.js +42 -0
- package/dist/Geomap-QB6FNV5R.js +84 -0
- package/dist/HicApp-TQKQKJTN.js +2245 -0
- package/dist/IDCViewer-L27ICGR5.js +10812 -0
- package/dist/NumBinaryEditor-FHSSXZV4.js +279 -0
- package/dist/NumBinaryEditor.unit.spec-AMR32JHJ.js +312 -0
- package/dist/NumContEditor-R5JB5XPB.js +105 -0
- package/dist/NumContEditor.unit.spec-3PQRIC4G.js +164 -0
- package/dist/NumCustomBinEditor-B3PKD54F.js +33 -0
- package/dist/NumCustomBinEditor.unit.spec-YZKCYZQM.js +397 -0
- package/dist/NumDiscreteEditor-7AO35XU7.js +170 -0
- package/dist/NumDiscreteEditor.unit.spec-SNDHS6VK.js +233 -0
- package/dist/NumRegularBinEditor-OREKM2DX.js +33 -0
- package/dist/NumRegularBinEditor.unit.spec-SIGD7PLE.js +278 -0
- package/dist/NumSplineEditor-RDFDVNJG.js +210 -0
- package/dist/NumSplineEditor.unit.spec-TXRQVLUE.js +224 -0
- package/dist/NumericDensity-QPDF6UU5.js +33 -0
- package/dist/NumericDensity.unit.spec-JYUYDHDG.js +418 -0
- package/dist/NumericHandler-JW6DLSMJ.js +34 -0
- package/dist/NumericHandler.unit.spec-Q2ZNM5NH.js +214 -0
- package/dist/ProteomeInput-OS5JWC2O.js +388 -0
- package/dist/Regression-53XPZCCQ.js +1416 -0
- package/dist/RunChart2-WEO42KPP.js +749 -0
- package/dist/SC-VAWRWOUI.js +1348 -0
- package/dist/SC-VAWRWOUI.js.map +7 -0
- package/dist/Violin-7VOFUOLE.js +1064 -0
- package/dist/Volcano-DI2RLILX.js +2456 -0
- package/dist/Wsi-6DNY4RUG.js +629 -0
- package/dist/adSandbox-B7GQZDYQ.js +33 -0
- package/dist/animatedBubbleChart-QGO3OY5E.js +547 -0
- package/dist/app-XBLP7YZQ.js +32 -0
- package/dist/app-ZARZ2HWS.js +42 -0
- package/dist/app.js +12 -12
- package/dist/bam-FGNF7RYM.js +876 -0
- package/dist/barchart-6YLJJSRO.js +42 -0
- package/dist/barchart2-7TTZPYWA.js +309 -0
- package/dist/block-7WZWBQVA.js +6250 -0
- package/dist/block.init-YN4KHHJ2.js +33 -0
- package/dist/block.mds.expressionrank-6PKN3KIE.js +354 -0
- package/dist/block.mds.geneboxplot-M6TXRPKO.js +823 -0
- package/dist/block.mds.junction-WKRLLJBT.js +1539 -0
- package/dist/block.mds.svcnv-I3DNNGYV.js +6796 -0
- package/dist/block.svg-D72WTLKP.js +159 -0
- package/dist/block.tk.aicheck-QT5WYKTQ.js +278 -0
- package/dist/block.tk.ase-3WGJONXX.js +360 -0
- package/dist/block.tk.bam-Q5X7D5IR.js +1901 -0
- package/dist/block.tk.bedgraphdot-VWE2D2HR.js +379 -0
- package/dist/block.tk.bigwig.ui-Q22KXFQT.js +206 -0
- package/dist/block.tk.hicstraw-3BMDZCQH.js +818 -0
- package/dist/block.tk.junction-BMKRAVUI.js +2358 -0
- package/dist/block.tk.junction.textmatrixui-ERLXPLGI.js +194 -0
- package/dist/block.tk.ld-KT5KQUXC.js +94 -0
- package/dist/block.tk.menu-RO7IJGFY.js +1024 -0
- package/dist/block.tk.pgv-PZ4AVD3V.js +938 -0
- package/dist/brainImaging-ZU3JSXFP.js +555 -0
- package/dist/brainRegions-DJELNKKN.js +217 -0
- package/dist/bubbleHeatmap-CPJ5KI6E.js +378 -0
- package/dist/cellTypeBubbleHeatmap-6NGBETXV.js +278 -0
- package/dist/chunk-232OR2PG.js +263 -0
- package/dist/chunk-26Y2MYFN.js +129 -0
- package/dist/chunk-33FULV5M.js +302 -0
- package/dist/chunk-3AXQF6GL.js +103 -0
- package/dist/chunk-3JHCCJ4I.js +54 -0
- package/dist/chunk-4S7TWVOY.js +397 -0
- package/dist/chunk-4ZVOO3NI.js +217 -0
- package/dist/chunk-5U7AYOEZ.js +1988 -0
- package/dist/chunk-5WIA4KFA.js +178 -0
- package/dist/chunk-5WMFEMII.js +550 -0
- package/dist/chunk-6OCWNYW3.js +49 -0
- package/dist/chunk-6UAY2HAB.js +5217 -0
- package/dist/chunk-6UAY2HAB.js.map +7 -0
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- package/dist/chunk-7AOA5WZY.js +274 -0
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- package/dist/chunk-HH5JKOE6.js +339 -0
- package/dist/chunk-HL5B4NME.js +379 -0
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- package/dist/chunk-MXJKO73I.js +272 -0
- package/dist/chunk-N6NL4XG2.js +2676 -0
- package/dist/chunk-NC4RKYVE.js +158 -0
- package/dist/chunk-NK235VQ6.js +4375 -0
- package/dist/chunk-NK235VQ6.js.map +7 -0
- package/dist/chunk-O3QKYUDH.js +1812 -0
- package/dist/chunk-O3QKYUDH.js.map +7 -0
- package/dist/chunk-OSYSJHAA.js +170 -0
- package/dist/chunk-PBWB5ZG2.js +240 -0
- package/dist/chunk-PCJF5MGF.js +203 -0
- package/dist/chunk-PF5UMQEJ.js +692 -0
- package/dist/chunk-PGRTCNOV.js +217 -0
- package/dist/chunk-Q6I2OH4P.js +182 -0
- package/dist/chunk-QOF27J24.js +6360 -0
- package/dist/chunk-QWCKIRW2.js +237 -0
- package/dist/chunk-R3LWGFGS.js +54 -0
- package/dist/chunk-REWUPST7.js +1233 -0
- package/dist/chunk-RMUK3TLD.js +2149 -0
- package/dist/chunk-RU2UHH7M.js +424 -0
- package/dist/chunk-RU2UHH7M.js.map +7 -0
- package/dist/chunk-RXQRCRHC.js +134 -0
- package/dist/chunk-SAMS5XBH.js +2902 -0
- package/dist/chunk-SXYZ274A.js +2327 -0
- package/dist/chunk-TAZQU2LC.js +339 -0
- package/dist/chunk-TFS2JZTH.js +34 -0
- package/dist/chunk-UFQDWGZU.js +102 -0
- package/dist/chunk-UJRURRJ2.js +55 -0
- package/dist/chunk-UWRWFS3K.js +1278 -0
- package/dist/chunk-UYSYZM45.js +468 -0
- package/dist/chunk-VHDYIOWU.js +25009 -0
- package/dist/chunk-VHDYIOWU.js.map +7 -0
- package/dist/chunk-VPOAFNVL.js +70 -0
- package/dist/chunk-WB57TMJN.js +56 -0
- package/dist/chunk-WILJJPWV.js +255 -0
- package/dist/chunk-X2HEDRFQ.js +102 -0
- package/dist/chunk-X3UNVPC5.js +626 -0
- package/dist/chunk-XL4N3H32.js +276 -0
- package/dist/chunk-XNKLJMGF.js +123 -0
- package/dist/chunk-XZCRYWVL.js +243 -0
- package/dist/chunk-Y4MV62JA.js +56 -0
- package/dist/chunk-YKI4GLMT.js +98 -0
- package/dist/chunk-ZKINKYOJ.js +2784 -0
- package/dist/chunk-ZMSTQP6O.js +299 -0
- package/dist/cohort-CWGZR37O.js +70 -0
- package/dist/condition-B6XBQML4.js +327 -0
- package/dist/controls-QPW5HUAY.js +34 -0
- package/dist/controls.config-IUYTWRHA.js +34 -0
- package/dist/correlation-M2NKGTK2.js +95 -0
- package/dist/customdata.inputui-RKYIMOWO.js +284 -0
- package/dist/dataDownload-LPBLB7QD.js +329 -0
- package/dist/databrowser.ui-VTWHELDY.js +425 -0
- package/dist/dictionary-NINKMF3F.js +113 -0
- package/dist/dnaMethylation-LSVNG7FK.js +33 -0
- package/dist/dnaMethylation.integration.spec-6IT3Y3FS.js +198 -0
- package/dist/dofetch-HLMSTOMY.js +48 -0
- package/dist/e2pca-6PKLCC7L.js +344 -0
- package/dist/ep-3RFB6K3B.js +1249 -0
- package/dist/expclust.gdc.spec-MEWKHFMD.js +302 -0
- package/dist/facet-A4JH7FCW.js +519 -0
- package/dist/gb-PTF7CLDG.js +81 -0
- package/dist/geneExpClustering-VKUIAYCK.js +244 -0
- package/dist/geneExpression-3GQFWVJL.js +310 -0
- package/dist/geneExpression-VC7QPM3T.js +33 -0
- package/dist/geneExpression.unit.spec-PQS7BOMF.js +128 -0
- package/dist/geneORA-FCMFWZTN.js +273 -0
- package/dist/geneRanking-RTPPGBD4.js +548 -0
- package/dist/geneVariant-2TQ2JD4K.js +36 -0
- package/dist/geneVariant-4S6FLJTN.js +289 -0
- package/dist/geneVariant.integration.spec-YTFFHWQP.js +503 -0
- package/dist/genefusion.ui-P7YH32A6.js +303 -0
- package/dist/geneset-4J43JA3C.js +203 -0
- package/dist/genomeBrowser.spec-T2VFNUAV.js +276 -0
- package/dist/grin2-5TH4EBVQ.js +949 -0
- package/dist/grin2-KXMSYYYM.js +70 -0
- package/dist/hierCluster-2HFMEHAD.js +59 -0
- package/dist/hierCluster-5RQV7B5I.js +55 -0
- package/dist/hierCluster.config-PNBGJE6F.js +36 -0
- package/dist/hierCluster.integration.spec-TZLVKUC5.js +483 -0
- package/dist/hierCluster.interactivity-OQD3IQ4X.js +49 -0
- package/dist/hierCluster.renderers-DUDSHKDT.js +19 -0
- package/dist/imagePlot-6YH7S2PV.js +156 -0
- package/dist/importPlot-Z2UKA456.js +8 -0
- package/dist/isoformExpression-SRJMGXHD.js +35 -0
- package/dist/isoformExpression.unit.spec-PBVKSWCS.js +237 -0
- package/dist/junction-D4UP2AGY.js +36 -0
- package/dist/junction.unit.spec-M5CEGNUE.js +182 -0
- package/dist/launch.adhoc-SWJOT47S.js +37 -0
- package/dist/leftlabel.sample-4ZAM2JSS.js +258 -0
- package/dist/lollipop-GMGJPMJN.js +166 -0
- package/dist/maf-2TFOOAIF.js +455 -0
- package/dist/maftimeline-DRBM4ZYD.js +587 -0
- package/dist/matrix-22R4BC3F.js +54 -0
- package/dist/matrix-W4IRSBO5.js +59 -0
- package/dist/matrix.cells-QKWO5EP4.js +26 -0
- package/dist/matrix.config-ZZ7NFCIT.js +37 -0
- package/dist/matrix.data-3W6P6NBU.js +23 -0
- package/dist/matrix.groups-XW2G5BJH.js +26 -0
- package/dist/matrix.integration.spec-X4UPLQRI.js +3160 -0
- package/dist/matrix.interactivity-NGS3LJPV.js +37 -0
- package/dist/matrix.layout-SAGZVQPG.js +39 -0
- package/dist/matrix.legend-C3MQRAZJ.js +20 -0
- package/dist/matrix.renderers-IG7Q2F6Y.js +34 -0
- package/dist/matrix.serieses-SNMIQFKB.js +19 -0
- package/dist/matrix.sort-WHVUSUJZ.js +26 -0
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- package/dist/matrix.unit.spec-I6JGZHQZ.js +150 -0
- package/dist/mavb-MLVNZJSF.js +727 -0
- package/dist/mds.fimo-MOGZPFCK.js +513 -0
- package/dist/mds.samplescatterplot-YLGNYKTH.js +1545 -0
- package/dist/mds.survivalplot-R273N2GB.js +477 -0
- package/dist/multivalue-5GFBYENI.js +83 -0
- package/dist/numericDictTermCluster-MJK6SIWE.js +63 -0
- package/dist/oncomatrix-OAQT2CUN.js +290 -0
- package/dist/oncomatrix.spec-6C62LLJI.js +443 -0
- package/dist/plot.2dvaf-WDXWSC7L.js +372 -0
- package/dist/plot.app-YTHD3ZJQ.js +36 -0
- package/dist/plot.barplot-SRZM3GU3.js +97 -0
- package/dist/plot.boxplot-VWOMZPZE.js +146 -0
- package/dist/plot.brainImaging-6XL7YF5G.js +51 -0
- package/dist/plot.disco-VRKSTV5Z.js +99 -0
- package/dist/plot.ssgq-AXASDOZZ.js +134 -0
- package/dist/plot.vaf2cov-IF4DEEM5.js +253 -0
- package/dist/polar2-QQ3KHFME.js +232 -0
- package/dist/profileForms-2US7IYYM.js +941 -0
- package/dist/profilePlot-DZQCBKPA.js +49 -0
- package/dist/proteinView-TTLVQ43H.js +1357 -0
- package/dist/proteomeCohortCompare-BUZYOOIA.js +912 -0
- package/dist/pseudbulk.unit.spec-YNXQWDSU.js +86 -0
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- package/dist/qualitative-AKIZRNFO.js +38 -0
- package/dist/radar2-7GXYLICJ.js +327 -0
- package/dist/radarFacility2-WFKOWGH2.js +335 -0
- package/dist/render-F3CBMRD5.js +33 -0
- package/dist/report-6LHMHUDY.js +217 -0
- package/dist/sampleView-GWKPMVJH.js +43 -0
- package/dist/samplelst-TH6IBDVG.js +106 -0
- package/dist/samplematrix-RPCWT33H.js +2193 -0
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- package/dist/singleCellCellType-CLJFCBV6.js +33 -0
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- package/dist/singleCellGeneExpression-L6MG37XE.js +33 -0
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- package/dist/snplocus-GM6IEDPR.js +203 -0
- package/dist/spliceevent.a53ss.diagram-ZFQDHHPY.js +146 -0
- package/dist/spliceevent.exonskip.diagram-ZK6JOUMU.js +278 -0
- package/dist/spliceevent.noeventdiagram-YKTF2VZE.js +455 -0
- package/dist/ssGSEA-FDN4CH2Y.js +33 -0
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- package/dist/studyCatalog-X2IGVJ26.js +414 -0
- package/dist/summarizeCnvGeneexp-H7A5SI3R.js +158 -0
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- package/dist/summarizeMutationCnv-WQLMD2TR.js +159 -0
- package/dist/summarizeMutationDiagnosis-3S52IDWF.js +35 -0
- package/dist/summarizeMutationSurvival-NTQIUNW7.js +99 -0
- package/dist/summary-LMRFRKKI.js +44 -0
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- package/dist/sunburst-ICUSGIWV.js +278 -0
- package/dist/survival-K44Q2HAC.js +1249 -0
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- /package/dist/{summarizeCnvGeneexp-UJBTMXXH.js.map → summarizeCnvGeneexp-H7A5SI3R.js.map} +0 -0
- /package/dist/{summarizeGeneexpSurvival-XLQJGDRY.js.map → summarizeGeneexpSurvival-GJF6VD2S.js.map} +0 -0
- /package/dist/{summarizeMutationCnv-7RWSXB6F.js.map → summarizeMutationCnv-WQLMD2TR.js.map} +0 -0
- /package/dist/{summarizeMutationDiagnosis-42MG737O.js.map → summarizeMutationDiagnosis-3S52IDWF.js.map} +0 -0
- /package/dist/{summarizeMutationSurvival-FWVKVEHK.js.map → summarizeMutationSurvival-NTQIUNW7.js.map} +0 -0
- /package/dist/{summary-NR26ZPQB.js.map → summary-LMRFRKKI.js.map} +0 -0
- /package/dist/{summary.integration.spec-Z7JSUTGK.js.map → summary.integration.spec-KQMZKSEQ.js.map} +0 -0
- /package/dist/{summaryInput-DGKUOJVC.js.map → summaryInput-NNHZVHQA.js.map} +0 -0
- /package/dist/{sunburst-C5JNGFT7.js.map → sunburst-ICUSGIWV.js.map} +0 -0
- /package/dist/{survival-GCEX3EAZ.js.map → survival-K5YBNNVE.js.map} +0 -0
- /package/dist/{survival.integration.spec-ZX5RD6VQ.js.map → survival.integration.spec-4LRJW2V2.js.map} +0 -0
- /package/dist/{svgraph-XCFZ2WAG.js.map → svgraph-U7MS7YEM.js.map} +0 -0
- /package/dist/{svmr-4XTTURHA.js.map → svmr-2JGDBPAI.js.map} +0 -0
- /package/dist/{table-FQZ4UAH6.js.map → table-CBWOHYW6.js.map} +0 -0
- /package/dist/{termCollection-DN6A6HJU.js.map → termCollection-JFGGXVFI.js.map} +0 -0
- /package/dist/{termCollection-5QCR6LED.js.map → termCollection-VE3FFL6V.js.map} +0 -0
- /package/dist/{termCollection.unit.spec-RSSSXDHU.js.map → termCollection.unit.spec-XQQTDV4A.js.map} +0 -0
- /package/dist/{termCollectionFractionSelection-OSN7FITY.js.map → termCollectionFractionSelection-TFGF27GR.js.map} +0 -0
- /package/dist/{termCollectionFractionSelection.unit.spec-UW6D3DVK.js.map → termCollectionFractionSelection.unit.spec-MKGG4JBC.js.map} +0 -0
- /package/dist/{tk-4CZCVYBP.js.map → tk-74SGUUZY.js.map} +0 -0
- /package/dist/{tk-BIPJNXBZ.js.map → tk-K4JFYIZY.js.map} +0 -0
- /package/dist/{tp.ui-NI4U7567.js.map → tp.ui-727EXXMT.js.map} +0 -0
- /package/dist/{tvs.dt-YRDNDXUU.js.map → tvs.dt-YB2C3T33.js.map} +0 -0
- /package/dist/{tvs.dtcnv.categorical-REP4T33P.js.map → tvs.dtcnv.categorical-NOWMZOE5.js.map} +0 -0
- /package/dist/{tvs.dtcnv.continuous-K7OREEP5.js.map → tvs.dtcnv.continuous-3KWUNU76.js.map} +0 -0
- /package/dist/{tvs.dtfusion-AB5MPH3Q.js.map → tvs.dtfusion-NOJSTABU.js.map} +0 -0
- /package/dist/{tvs.dtitd-AFWU7ACY.js.map → tvs.dtitd-OD5B377P.js.map} +0 -0
- /package/dist/{tvs.dtsnvindel-G7XQEKEO.js.map → tvs.dtsnvindel-WIQMZTRH.js.map} +0 -0
- /package/dist/{tvs.dtsv-Y6BEY4J2.js.map → tvs.dtsv-HPERDN3R.js.map} +0 -0
- /package/dist/{tvs.samplelst-XRRWPC2E.js.map → tvs.samplelst-TC2Z7Z35.js.map} +0 -0
- /package/dist/{tvs.termCollection-PL4AN3GA.js.map → tvs.termCollection-F64BHWAL.js.map} +0 -0
- /package/dist/{vocabulary-DJZWOO6Q.js.map → vocabulary-ZOYF2VHS.js.map} +0 -0
- /package/dist/{wsi.direct-XUWANMKV.js.map → wsi.direct-Z5YUZEXG.js.map} +0 -0
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import {
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DownloadMenu,
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PlotBase,
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controlsInit,
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fillTermWrapper,
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fillTwLst,
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getCategoricalTermFilter,
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getCombinedTermFilter
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} from "./chunk-VHDYIOWU.js";
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import {
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importPlot
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} from "./chunk-5WIA4KFA.js";
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import {
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Menu
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} from "./chunk-7XZA2XR2.js";
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import {
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icons
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} from "./chunk-6RRZRISL.js";
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import {
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select_default
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} from "./chunk-I6Y4O3RR.js";
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// plots/profile/profilePlot.ts
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var orderedIncomes = ["Low income", "Lower middle income", "Upper middle income", "High income"];
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var orderedVolumes = [
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"Small (1-25 annual newly diagnoses)",
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"Medium (26-80 annual newly diagnoses)",
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"Large (81-120 annual newly diagnoses)",
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"Very large (>120 annual newly diagnoses)"
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];
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var ABBREV_COHORT = 0;
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var FULL_COHORT = 1;
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var profilePlot = class extends PlotBase {
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constructor(opts, type) {
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super(opts);
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this.type = type;
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this.downloadCount = 0;
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this.tip = new Menu({ padding: "4px", offsetX: 10, offsetY: 15, testid: "sjpp-profile-tooltip" });
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this.scoreTerms = [];
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this.scScoreTerms = [];
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this.isRadarFacility = false;
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this.components = { plots: {} };
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}
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//extracts the relevant state from the appState: config, termfilter, vocab, login info
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getState(appState) {
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const config = appState.plots.find((p) => p.id === this.id);
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if (!config) throw `No plot with id='${this.id}' found`;
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const { logged, sites, user } = getProfileLogin(this.app, appState.activeCohort);
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const site = sites?.[0];
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return {
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config,
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termfilter: appState.termfilter,
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dslabel: appState.vocab.dslabel,
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termdbConfig: appState.termdbConfig,
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vocab: appState.vocab,
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logged,
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//later change to read login info
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site,
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sites,
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user,
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activeCohort: appState.activeCohort,
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//Find plots where I am a parent. Here the child is a second plot for comparison
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plots: appState.plots.filter((p) => p.parentId === this.id)
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//this property is needed to indicate that child plots need to be added to the appState plots
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};
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}
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//refers to the view where all the filters are shown and not the preselected site
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isAggregate() {
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if (!this.state.logged) return true;
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if (this.settings.isAggregate) return true;
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if (this.state.sites?.length > 1 || this.state.user == "admin" || this.isRadarFacility) return true;
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return false;
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}
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//initializes the plot elements
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async init(appState) {
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const config = appState.plots.find((p) => p.id === this.id);
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const state = this.getState(appState);
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if (this.opts.header) {
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let chartName = config.chartType.match(/[A-Z][a-z]+/g);
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chartName = chartName.join(" ");
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chartName = config.headerTitle ? config.headerTitle + ` / ${state.user}` : chartName + ` / ${state.user}`;
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this.opts.header.style("text-transform", "capitalize").text(chartName);
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}
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const div = this.opts.holder.append("div").style("display", "inline-block");
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const leftDiv = div.append("div").style("display", "inline-block").style("vertical-align", "top");
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const rightDiv = div.append("div").style("display", "inline-block").style("vertical-align", "top");
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const controlsDiv = leftDiv.append("div").style("display", "inline-block").style("font-size", "0.9em");
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const iconsDiv = leftDiv.append("div").style("margin-top", "10px").style("padding-left", "12px");
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const holder = rightDiv.insert("div").style("display", "inline-block");
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const plotDiv = holder.append("div");
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this.opts.holder.style("position", "relative");
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const loadingDiv = this.opts.holder.append("div").attr("class", "sjpp-loading-overlay").style("display", "none");
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loadingDiv.append("div").attr("class", "sjpp-spinner");
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this.dom = {
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controlsDiv,
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holder,
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iconsDiv,
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rightDiv,
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plotDiv,
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loadingDiv
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};
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select_default(".sjpp-output-sandbox-content").on("scroll", (event) => {
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if (this.onMouseOut) this.onMouseOut(event);
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});
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this.dom.rightDiv.on("mousemove", (event) => this.onMouseOver(event));
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this.dom.rightDiv.on("mouseleave", (event) => this.onMouseOut(event));
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this.dom.rightDiv.on("mouseout", (event) => this.onMouseOut(event));
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document.addEventListener("scroll", () => this?.tip?.hide());
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const restartDiv = iconsDiv.append("div").style("padding-bottom", "8px");
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icons["restart"](restartDiv, {
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title: "Clear filters",
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handler: async () => {
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this.clearFiltersExcept([]);
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this.app.dispatch({
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type: "plot_edit",
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id: this.id,
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config: { filter: this.getFilter(), settings: { [this.type]: this.settings } }
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});
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}
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});
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if (!config.parentId) {
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const iconDiv = iconsDiv.append("div").style("fill", "#aaa").style("padding", "2px");
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icons["add"](iconDiv, {
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title: "Open another plot for comparison",
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handler: () => {
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const show = !this.isComparison;
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const icon = iconDiv.select("svg");
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icon.style("fill", show ? "orange" : "black");
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if (this.isComparison) {
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const id = this.state.plots.find((p) => p.parentId === this.id)?.id;
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this.app.dispatch({
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type: "plot_delete",
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id,
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parentId: this.id
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});
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return;
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}
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const config2 = structuredClone(this.config);
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config2.parentId = this.id;
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this.app.dispatch({
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type: "plot_create",
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config: config2
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});
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}
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});
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}
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}
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//tooltip handler to hide the tooltip when mouse leaves the plot area
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onMouseOut(_event) {
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this.tip.hide();
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}
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async main() {
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this.config = JSON.parse(JSON.stringify(this.state.config));
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this.settings = this.config.settings[this.type];
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this.dom.plotDiv.selectAll("*").remove();
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this.isComparison = this.config.parentId || this.state.plots.length > 0;
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for (const config of this.state.plots) {
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const plot = structuredClone(config);
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if (this.components.plots[plot.id]) continue;
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const holder = this.opts.holder.append("div").style("display", "inline-block").style("padding", "5px");
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plot.holder = holder.append("div");
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plot.app = this.app;
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const { componentInit } = await importPlot(plot.chartType);
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this.components.plots[plot.id] = await componentInit(plot);
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}
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for (const plotId in this.components.plots) {
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if (!this.state.plots.find((p) => p.id === plotId)) {
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this.components.plots[plotId].destroy();
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delete this.components.plots[plotId];
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}
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}
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}
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async setControls(additionalInputs = []) {
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try {
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const isRadarFacility = this.isRadarFacility;
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const filters = {};
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for (const tw of this.config.filterTWs) {
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filters[tw.term.id] = getCategoricalTermFilter(this.config.filterTWs, this.settings, tw);
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}
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this.filteredTermValues = await this.vocabApi.filterTermValues({
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terms: this.config.filterTWs,
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filter: this.state.termfilter.filter,
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filters,
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facilityTW: this.config.facilityTW,
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// safe to pass because the backend code will still compare terms[] with the the dataset's hiddenTermIds,
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// it only affects what will be included in the aggregation and does not disable user access authentication
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filterByUserSites: this.settings.filterByUserSites,
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showAll: true
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});
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const regions = this.filteredTermValues[this.config.regionTW.id];
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const sjgRegions = this.filteredTermValues[this.config.sjgRegionTW.id];
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const countries = this.filteredTermValues[this.config.countryTW.id];
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const incomes = this.filteredTermValues[this.config.incomeTW.id];
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const teachingStates = this.filteredTermValues[this.config.teachingStatusTW.id];
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const referralStates = this.filteredTermValues[this.config.referralStatusTW.id];
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const fundingSources = this.filteredTermValues[this.config.fundingSourceTW.id];
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const hospitalVolumes = this.filteredTermValues[this.config.hospitalVolumeTW.id];
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const yearsOfImplementation = this.filteredTermValues[this.config.yearOfImplementationTW.id];
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incomes.sort((elem1, elem2) => {
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const i1 = orderedIncomes.indexOf(elem1.value);
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const i2 = orderedIncomes.indexOf(elem2.value);
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if (i1 < i2) return -1;
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return 1;
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});
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hospitalVolumes.sort((elem1, elem2) => {
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const i1 = orderedVolumes.indexOf(elem1.value);
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const i2 = orderedVolumes.indexOf(elem2.value);
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if (i1 < i2) return -1;
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return 1;
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});
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const types = this.filteredTermValues[this.config.typeTW.id];
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const isAggregate = this.isAggregate();
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if (!this.settings[this.config.facilityTW?.term?.id] && this.state.sites?.length == 1 && !isAggregate) {
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this.settings[this.config.facilityTW?.term?.id] = [this.state.sites[0]];
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}
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this.filter = this.config.filter || this.getFilter();
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if (this.type == "profileForms")
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this.data = await this.vocabApi.getProfileFormScores({
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scoreTerms: this.scoreTerms,
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scScoreTerms: this.scScoreTerms,
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filter: this.filter,
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facilityTW: this.config.facilityTW,
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filterByUserSites: this.settings.filterByUserSites
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});
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else if (this.type == "profileRadarFacility2")
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this.data = await this.fetchRadarFacility2Scores();
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if ((this.type == "profileForms" || this.type == "profileRadarFacility2") && this.data && "error" in this.data)
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throw this.data.error;
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this.sites = this.filteredTermValues[this.config.facilityTW.id]?.filter((s) => !s.disabled && s.value);
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if (this.settings[this.config.facilityTW?.term?.id])
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for (const site of this.settings[this.config.facilityTW?.term?.id]) {
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const siteOption = this.sites.find((s) => s.value == site);
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if (siteOption) siteOption.selected = true;
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}
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const chartType = this.type;
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236
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+
this.dom.controlsDiv.selectAll("*").remove();
|
|
237
|
+
const inputs = [];
|
|
238
|
+
const userSitesFilterInput = {
|
|
239
|
+
label: "Use accessible sites only",
|
|
240
|
+
boxLabel: "",
|
|
241
|
+
type: "checkbox",
|
|
242
|
+
chartType,
|
|
243
|
+
settingsKey: "filterByUserSites"
|
|
244
|
+
};
|
|
245
|
+
if (this.state.sites?.length == 1 && !isRadarFacility) {
|
|
246
|
+
const dataInput = {
|
|
247
|
+
label: "Data",
|
|
248
|
+
type: "radio",
|
|
249
|
+
chartType,
|
|
250
|
+
settingsKey: "isAggregate",
|
|
251
|
+
styles: { display: "inline-block" },
|
|
252
|
+
options: [
|
|
253
|
+
{ label: this.state.site, value: false },
|
|
254
|
+
{ label: "Aggregate", value: true }
|
|
255
|
+
],
|
|
256
|
+
callback: (isAggregate2) => {
|
|
257
|
+
this.settings.isAggregate = isAggregate2;
|
|
258
|
+
const id = this.sites.find((s) => s.value == this.state.site)?.value;
|
|
259
|
+
const value = isAggregate2 ? [] : [id];
|
|
260
|
+
this.setFilterValue(this.config.facilityTW.term.id, value);
|
|
261
|
+
}
|
|
262
|
+
};
|
|
263
|
+
inputs.push(dataInput);
|
|
264
|
+
}
|
|
265
|
+
if (isAggregate || isRadarFacility) {
|
|
266
|
+
inputs.push(
|
|
267
|
+
...[
|
|
268
|
+
{
|
|
269
|
+
label: "WHO Region",
|
|
270
|
+
type: "dropdown",
|
|
271
|
+
chartType,
|
|
272
|
+
settingsKey: this.config.regionTW.term.id,
|
|
273
|
+
options: regions,
|
|
274
|
+
callback: (value) => this.setFilterValue(this.config.regionTW.term.id, value)
|
|
275
|
+
},
|
|
276
|
+
{
|
|
277
|
+
label: "SJG Region",
|
|
278
|
+
type: "dropdown",
|
|
279
|
+
chartType,
|
|
280
|
+
settingsKey: this.config.sjgRegionTW.term.id,
|
|
281
|
+
options: sjgRegions,
|
|
282
|
+
callback: (value) => this.setFilterValue(this.config.sjgRegionTW.term.id, value)
|
|
283
|
+
},
|
|
284
|
+
{
|
|
285
|
+
label: "Country",
|
|
286
|
+
type: "dropdown",
|
|
287
|
+
chartType,
|
|
288
|
+
settingsKey: this.config.countryTW.term.id,
|
|
289
|
+
options: countries,
|
|
290
|
+
callback: (value) => this.setFilterValue(this.config.countryTW.term.id, value)
|
|
291
|
+
},
|
|
292
|
+
{
|
|
293
|
+
label: "Income group",
|
|
294
|
+
type: "dropdown",
|
|
295
|
+
chartType,
|
|
296
|
+
settingsKey: this.config.incomeTW.term.id,
|
|
297
|
+
options: incomes,
|
|
298
|
+
callback: (value) => this.setFilterValue(this.config.incomeTW.term.id, value)
|
|
299
|
+
},
|
|
300
|
+
{
|
|
301
|
+
label: "Facility type",
|
|
302
|
+
type: "dropdown",
|
|
303
|
+
chartType,
|
|
304
|
+
settingsKey: this.config.typeTW.term.id,
|
|
305
|
+
options: types,
|
|
306
|
+
callback: (value) => this.setFilterValue(this.config.typeTW.term.id, value)
|
|
307
|
+
},
|
|
308
|
+
{
|
|
309
|
+
label: this.config.teachingStatusTW.term.name,
|
|
310
|
+
type: "dropdown",
|
|
311
|
+
chartType,
|
|
312
|
+
settingsKey: this.config.teachingStatusTW.term.id,
|
|
313
|
+
options: teachingStates,
|
|
314
|
+
callback: (value) => this.setFilterValue(this.config.teachingStatusTW.term.id, value)
|
|
315
|
+
},
|
|
316
|
+
{
|
|
317
|
+
label: this.config.referralStatusTW.term.name,
|
|
318
|
+
type: "dropdown",
|
|
319
|
+
chartType,
|
|
320
|
+
settingsKey: this.config.referralStatusTW.term.id,
|
|
321
|
+
options: referralStates,
|
|
322
|
+
callback: (value) => this.setFilterValue(this.config.referralStatusTW.term.id, value)
|
|
323
|
+
},
|
|
324
|
+
{
|
|
325
|
+
label: this.config.fundingSourceTW.term.name,
|
|
326
|
+
type: "dropdown",
|
|
327
|
+
chartType,
|
|
328
|
+
settingsKey: this.config.fundingSourceTW.term.id,
|
|
329
|
+
options: fundingSources,
|
|
330
|
+
callback: (value) => this.setFilterValue(this.config.fundingSourceTW.term.id, value)
|
|
331
|
+
},
|
|
332
|
+
{
|
|
333
|
+
label: this.config.hospitalVolumeTW.term.name,
|
|
334
|
+
type: "dropdown",
|
|
335
|
+
chartType,
|
|
336
|
+
settingsKey: this.config.hospitalVolumeTW.term.id,
|
|
337
|
+
options: hospitalVolumes,
|
|
338
|
+
callback: (value) => this.setFilterValue(this.config.hospitalVolumeTW.term.id, value)
|
|
339
|
+
},
|
|
340
|
+
{
|
|
341
|
+
label: this.config.yearOfImplementationTW.term.name,
|
|
342
|
+
type: "dropdown",
|
|
343
|
+
chartType,
|
|
344
|
+
settingsKey: this.config.yearOfImplementationTW.term.id,
|
|
345
|
+
options: yearsOfImplementation,
|
|
346
|
+
callback: (value) => this.setFilterValue(this.config.yearOfImplementationTW.term.id, value)
|
|
347
|
+
}
|
|
348
|
+
]
|
|
349
|
+
);
|
|
350
|
+
}
|
|
351
|
+
if (this.state.logged) {
|
|
352
|
+
if (isAggregate && this.sites.length > 1) {
|
|
353
|
+
const sitesInput = {
|
|
354
|
+
label: "Sites",
|
|
355
|
+
type: "dropdown",
|
|
356
|
+
chartType,
|
|
357
|
+
options: this.sites,
|
|
358
|
+
multiple: true,
|
|
359
|
+
callback: (values) => this.setFilterValue(this.config.facilityTW.term.id, values)
|
|
360
|
+
};
|
|
361
|
+
inputs.push(sitesInput);
|
|
362
|
+
if (this.state.user != "admin") inputs.unshift(userSitesFilterInput);
|
|
363
|
+
}
|
|
364
|
+
if (isRadarFacility) {
|
|
365
|
+
if (this.sampleData?.sites?.length) {
|
|
366
|
+
const facilitySites = this.sampleData.sites;
|
|
367
|
+
const facilitySite = this.settings.facilitySite ? facilitySites.find((s) => s.value == this.settings.facilitySite) : facilitySites[0];
|
|
368
|
+
if (!facilitySite)
|
|
369
|
+
throw new Error(`Access to ${this.settings.facilitySite} facility not allowed`);
|
|
370
|
+
facilitySite.selected = true;
|
|
371
|
+
inputs.unshift({
|
|
372
|
+
label: "Facility site",
|
|
373
|
+
type: "dropdown",
|
|
374
|
+
chartType,
|
|
375
|
+
options: facilitySites,
|
|
376
|
+
callback: (value) => {
|
|
377
|
+
this.setFacilitySite(value);
|
|
378
|
+
}
|
|
379
|
+
});
|
|
380
|
+
}
|
|
381
|
+
}
|
|
382
|
+
}
|
|
383
|
+
inputs.unshift(...additionalInputs);
|
|
384
|
+
this.components.controls = await controlsInit({
|
|
385
|
+
app: this.app,
|
|
386
|
+
id: this.id,
|
|
387
|
+
holder: this.dom.controlsDiv,
|
|
388
|
+
inputs,
|
|
389
|
+
title: "Filters"
|
|
390
|
+
});
|
|
391
|
+
this.components.controls.on(`downloadClick.${chartType}`, (event) => this.download(event));
|
|
392
|
+
this.components.controls.on(`helpClick.${chartType}`, () => {
|
|
393
|
+
const activeCohort = this.state.activeCohort;
|
|
394
|
+
let link;
|
|
395
|
+
if (activeCohort == ABBREV_COHORT) {
|
|
396
|
+
if (chartType == "profileBarchart2")
|
|
397
|
+
link = "https://global.stjude.org/content/dam/global/en-us/documents/bargraphabbr-profiledash.pdf";
|
|
398
|
+
else if (chartType == "profilePolar2")
|
|
399
|
+
link = "https://global.stjude.org/content/dam/global/en-us/documents/polargraphabbr-profiledash.pdf";
|
|
400
|
+
else if (chartType.startsWith("profileRadar"))
|
|
401
|
+
link = "https://global.stjude.org/content/dam/global/en-us/documents/radarabbr-Profiledash-rev9.14.2026.pdf";
|
|
402
|
+
} else if (activeCohort == FULL_COHORT) {
|
|
403
|
+
if (chartType == "profileBarchart2")
|
|
404
|
+
link = "https://global.stjude.org/content/dam/global/en-us/documents/bargraphfull-profiledash.pdf";
|
|
405
|
+
else if (chartType == "profilePolar2")
|
|
406
|
+
link = "https://global.stjude.org/content/dam/global/en-us/documents/polargraphfull-profiledash.pdf";
|
|
407
|
+
else if (chartType.startsWith("profileRadar"))
|
|
408
|
+
link = "https://global.stjude.org/content/dam/global/en-us/documents/radarfull-profiledash-rev9.14.2026.pdf";
|
|
409
|
+
}
|
|
410
|
+
if (link) window.open(link);
|
|
411
|
+
});
|
|
412
|
+
this.filtersCount = 0;
|
|
413
|
+
} catch (e) {
|
|
414
|
+
console.log(e);
|
|
415
|
+
throw e;
|
|
416
|
+
}
|
|
417
|
+
}
|
|
418
|
+
setFilterValue(key, value) {
|
|
419
|
+
const config = this.config;
|
|
420
|
+
this.settings[key] = value;
|
|
421
|
+
config.filter = this.getFilter();
|
|
422
|
+
this.app.dispatch({ type: "plot_edit", id: this.id, config: this.config });
|
|
423
|
+
}
|
|
424
|
+
getFilterWithSettings(settings) {
|
|
425
|
+
let filter = getCategoricalTermFilter(this.config.filterTWs, settings, null);
|
|
426
|
+
filter = getCombinedTermFilter(this.state, filter);
|
|
427
|
+
return filter.filter;
|
|
428
|
+
}
|
|
429
|
+
getFilter() {
|
|
430
|
+
let filter = getCategoricalTermFilter(this.config.filterTWs, this.settings, null);
|
|
431
|
+
filter = getCombinedTermFilter(this.state, filter);
|
|
432
|
+
return filter.filter;
|
|
433
|
+
}
|
|
434
|
+
clearFiltersExcept(ids) {
|
|
435
|
+
for (const tw of this.config.filterTWs) if (!ids.includes(tw.term.id)) this.settings[tw.term.id] = "";
|
|
436
|
+
}
|
|
437
|
+
setFacilitySite(site) {
|
|
438
|
+
this.settings.facilitySite = site;
|
|
439
|
+
this.app.dispatch({ type: "plot_edit", id: this.id, config: this.config });
|
|
440
|
+
}
|
|
441
|
+
hasFilterValue(value) {
|
|
442
|
+
return !!value && value.length !== 0;
|
|
443
|
+
}
|
|
444
|
+
/*
|
|
445
|
+
Rows addFilterLegend() will draw: the title plus one row per active filter. Charts that
|
|
446
|
+
stack the filter legend under the plot read this before drawing, to size the svg height.
|
|
447
|
+
*/
|
|
448
|
+
getFilterLegendRowCount() {
|
|
449
|
+
return 1 + this.config.filterTWs.filter((tw) => this.hasFilterValue(this.settings[tw.term.id])).length;
|
|
450
|
+
}
|
|
451
|
+
addFilterLegend() {
|
|
452
|
+
const hasFilters = this.config.filterTWs.some((tw) => this.settings[tw.term.id]);
|
|
453
|
+
const title = hasFilters ? "Filters" : "No filter applied";
|
|
454
|
+
this.filterG.attr("font-size", "0.9em").append("text").attr("text-anchor", "left").style("font-weight", "bold").text(`${title} (n=${this.data.n})`).attr("transform", `translate(0, -5)`);
|
|
455
|
+
for (const tw of this.config.filterTWs) this.addFilterLegendItem(tw.term.name, this.settings[tw.term.id]);
|
|
456
|
+
}
|
|
457
|
+
addFilterLegendItem(filter, value) {
|
|
458
|
+
if (!this.hasFilterValue(value)) return;
|
|
459
|
+
this.filtersCount++;
|
|
460
|
+
const isArray = Array.isArray(value);
|
|
461
|
+
let text = isArray ? value.join(", ") : value;
|
|
462
|
+
if (text.length > 40) {
|
|
463
|
+
text = text.slice(0, 40) + "...";
|
|
464
|
+
}
|
|
465
|
+
const itemG = this.filterG.append("g").attr("font-size", "0.95em");
|
|
466
|
+
const textElem = itemG.append("text").attr("transform", `translate(0, ${this.filtersCount * 22})`).attr("text-anchor", "left");
|
|
467
|
+
textElem.append("tspan").attr("font-weight", "bold").text(`${filter}: `);
|
|
468
|
+
textElem.append("tspan").text(text);
|
|
469
|
+
}
|
|
470
|
+
addEndUserImpressionNote(uiG) {
|
|
471
|
+
uiG.attr("font-size", "0.9em");
|
|
472
|
+
const textElem = uiG.append("text").attr("transform", `translate(0, 115)`);
|
|
473
|
+
textElem.append("tspan").attr("font-weight", "bold").text("End-user Impression: ");
|
|
474
|
+
textElem.append("tspan").text("It is provided by the local liaison who completed the assessment ");
|
|
475
|
+
uiG.append("text").attr("transform", `translate(0, 140)`).text("in consultation with the PHO medical director or directly by the PHO medical director.");
|
|
476
|
+
uiG.append("text").attr("transform", `translate(0, 165)`).text("The end-user was asked to rate the current status of the domains and subdomains included.");
|
|
477
|
+
}
|
|
478
|
+
addPOCNote(uiG) {
|
|
479
|
+
uiG.attr("font-size", "0.9em");
|
|
480
|
+
const textElem = uiG.append("text").attr("transform", `translate(0, 115)`);
|
|
481
|
+
textElem.append("tspan").attr("font-weight", "bold").text("Point of Care (POC) Staff: ");
|
|
482
|
+
textElem.append("tspan").text("All members of the assessment team, ");
|
|
483
|
+
uiG.append("text").attr("transform", `translate(0, 140)`).text("excluding the Site Coordinator. POC staff provide subjective information based ");
|
|
484
|
+
uiG.append("text").attr("transform", `translate(0, 165)`).text("on their experience and perception about service delivery at the PHO facility.");
|
|
485
|
+
}
|
|
486
|
+
addLegendItem(category, description, index) {
|
|
487
|
+
const text = this.legendG.append("text").attr("font-size", "0.9em").attr("transform", `translate(0, ${index * 20})`).attr("text-anchor", "left");
|
|
488
|
+
text.append("tspan").attr("font-weight", "bold").text(category);
|
|
489
|
+
text.append("tspan").text(`: ${description}`);
|
|
490
|
+
}
|
|
491
|
+
getDownloadFilename() {
|
|
492
|
+
this.downloadCount++;
|
|
493
|
+
let filename = `${this.type}${this.downloadCount}`;
|
|
494
|
+
filename = filename.split(" ").join("_");
|
|
495
|
+
return filename;
|
|
496
|
+
}
|
|
497
|
+
getPercentage(d) {
|
|
498
|
+
if (!d) return 0;
|
|
499
|
+
const score = this.data.term2Score[d.score.term.id];
|
|
500
|
+
return score;
|
|
501
|
+
}
|
|
502
|
+
async download(event) {
|
|
503
|
+
const chartImages = this.getChartImages();
|
|
504
|
+
const menu = new DownloadMenu(chartImages, this.getDownloadFilename());
|
|
505
|
+
menu.show(event.clientX, event.clientY, event.target);
|
|
506
|
+
}
|
|
507
|
+
preApiFreeze(api) {
|
|
508
|
+
api.download = this.download;
|
|
509
|
+
api.getChartImages = () => this.getChartImages();
|
|
510
|
+
}
|
|
511
|
+
getChartImages() {
|
|
512
|
+
const plots = Object.values(this.components.plots);
|
|
513
|
+
const note = "\xA9 2025 St. Jude Children\u2019s Research Hospital";
|
|
514
|
+
let name = plots.length > 0 ? "Original" : "";
|
|
515
|
+
name += ` ${note}`;
|
|
516
|
+
const charts = [{ name, svg: this.dom.svg }];
|
|
517
|
+
let i = 1;
|
|
518
|
+
for (const plot of plots) {
|
|
519
|
+
const chartImages = plot.getChartImages();
|
|
520
|
+
for (const chartImage of chartImages) {
|
|
521
|
+
const svg = chartImage.svg;
|
|
522
|
+
const name2 = chartImages.length > 1 ? `Comparison ${i}. ${chartImage.name} ${note}` : `Comparison ${chartImage.name} ${note}`;
|
|
523
|
+
charts.push({ name: name2, svg });
|
|
524
|
+
}
|
|
525
|
+
i++;
|
|
526
|
+
}
|
|
527
|
+
return charts;
|
|
528
|
+
}
|
|
529
|
+
};
|
|
530
|
+
function makeChartBtnMenu(holder, chartsInstance, chartType) {
|
|
531
|
+
const state = chartsInstance.state;
|
|
532
|
+
const key = state.activeCohort == FULL_COHORT ? "full" : "abbrev";
|
|
533
|
+
const typeConfig = state.termdbConfig?.plotConfigByCohort[key][chartType];
|
|
534
|
+
if (typeConfig.options.length == 1) {
|
|
535
|
+
createPlot(typeConfig.options[0], chartType, chartsInstance);
|
|
536
|
+
return;
|
|
537
|
+
}
|
|
538
|
+
const menuDiv = holder.append("div");
|
|
539
|
+
for (const plotConfig of typeConfig.options) {
|
|
540
|
+
menuDiv.append("div").attr("class", "sja_menuoption sja_sharp_border").text(plotConfig.title).on("click", () => {
|
|
541
|
+
createPlot(plotConfig, chartType, chartsInstance);
|
|
542
|
+
chartsInstance.dom.tip.hide();
|
|
543
|
+
});
|
|
544
|
+
}
|
|
545
|
+
function createPlot(plotConfig, chartType2, chartsInstance2) {
|
|
546
|
+
const config = structuredClone(plotConfig);
|
|
547
|
+
config.chartType = chartType2;
|
|
548
|
+
chartsInstance2.app.dispatch({
|
|
549
|
+
type: "plot_create",
|
|
550
|
+
chartType: chartType2,
|
|
551
|
+
config
|
|
552
|
+
});
|
|
553
|
+
}
|
|
554
|
+
}
|
|
555
|
+
async function getProfilePlotConfig(activeCohort, app, opts) {
|
|
556
|
+
const key = activeCohort == FULL_COHORT ? "full" : "abbrev";
|
|
557
|
+
const config = structuredClone(app.vocabApi.termdbConfig?.plotConfigByCohort[key]?.[opts.chartType]);
|
|
558
|
+
if (!config) throw `No data available for the plot ${opts.chartType} in this dataset`;
|
|
559
|
+
const cohortPreffix = activeCohort == FULL_COHORT ? "F" : "A";
|
|
560
|
+
config.facilityTW = { id: cohortPreffix + "UNIT" };
|
|
561
|
+
config.hidePlotFilter = true;
|
|
562
|
+
await fillTermWrapper(config.facilityTW, app.vocabApi);
|
|
563
|
+
await loadFilterTerms(config, activeCohort, app);
|
|
564
|
+
return config;
|
|
565
|
+
}
|
|
566
|
+
async function loadFilterTerms(config, activeCohort, app) {
|
|
567
|
+
const cohortPreffix = activeCohort == FULL_COHORT ? "F" : "A";
|
|
568
|
+
config.countryTW = { id: cohortPreffix + "country" };
|
|
569
|
+
config.regionTW = { id: cohortPreffix + "WHO_region" };
|
|
570
|
+
config.sjgRegionTW = { id: cohortPreffix + "SJG_region" };
|
|
571
|
+
config.incomeTW = { id: cohortPreffix + "Income_group" };
|
|
572
|
+
config.typeTW = { id: cohortPreffix + "FC_TypeofFacility" };
|
|
573
|
+
config.teachingStatusTW = { id: cohortPreffix + "FC_TeachingFacility" };
|
|
574
|
+
config.referralStatusTW = { id: cohortPreffix + "FC_ReferralFacility" };
|
|
575
|
+
config.fundingSourceTW = { id: cohortPreffix + "FC_FundingSrc" };
|
|
576
|
+
config.hospitalVolumeTW = { id: cohortPreffix + "PO_HospitalVolume" };
|
|
577
|
+
config.yearOfImplementationTW = { id: cohortPreffix + "Year_implementation" };
|
|
578
|
+
const filterTWs = [
|
|
579
|
+
config.facilityTW,
|
|
580
|
+
config.countryTW,
|
|
581
|
+
config.regionTW,
|
|
582
|
+
config.sjgRegionTW,
|
|
583
|
+
config.incomeTW,
|
|
584
|
+
config.typeTW,
|
|
585
|
+
config.teachingStatusTW,
|
|
586
|
+
config.referralStatusTW,
|
|
587
|
+
config.fundingSourceTW,
|
|
588
|
+
config.hospitalVolumeTW,
|
|
589
|
+
config.yearOfImplementationTW
|
|
590
|
+
];
|
|
591
|
+
await fillTwLst(filterTWs, app.vocabApi);
|
|
592
|
+
config.filterTWs = filterTWs;
|
|
593
|
+
}
|
|
594
|
+
function clearLocalFilters(plot) {
|
|
595
|
+
plot.settings = getDefaultProfilePlotSettings();
|
|
596
|
+
}
|
|
597
|
+
function getDefaultProfilePlotSettings() {
|
|
598
|
+
return {
|
|
599
|
+
isAggregate: false,
|
|
600
|
+
filterByUserSites: false
|
|
601
|
+
//if true, the aggregation will be limited to the user sites only
|
|
602
|
+
};
|
|
603
|
+
}
|
|
604
|
+
function getProfileLogin(app, cohort = FULL_COHORT) {
|
|
605
|
+
const auth = app.vocabApi.getClientAuthResult();
|
|
606
|
+
if (!auth) return { logged: false, sites: [], user: "public" };
|
|
607
|
+
const auth_info = cohort == FULL_COHORT ? auth.full : auth.abbrev;
|
|
608
|
+
const logged = auth_info?.role != "public";
|
|
609
|
+
if (!auth_info) return { logged: false, sites: [], user: "public" };
|
|
610
|
+
const user = auth_info?.role || "public";
|
|
611
|
+
const sites = user == "admin" ? null : auth_info.sites;
|
|
612
|
+
return { logged, sites, user };
|
|
613
|
+
}
|
|
614
|
+
|
|
615
|
+
export {
|
|
616
|
+
ABBREV_COHORT,
|
|
617
|
+
FULL_COHORT,
|
|
618
|
+
profilePlot,
|
|
619
|
+
makeChartBtnMenu,
|
|
620
|
+
getProfilePlotConfig,
|
|
621
|
+
loadFilterTerms,
|
|
622
|
+
clearLocalFilters,
|
|
623
|
+
getDefaultProfilePlotSettings,
|
|
624
|
+
getProfileLogin
|
|
625
|
+
};
|
|
626
|
+
//# sourceMappingURL=chunk-X3UNVPC5.js.map
|