@sjcrh/proteinpaint-client 2.187.0 → 2.188.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (963) hide show
  1. package/dist/2dmaf-6YIEXAIG.js +1372 -0
  2. package/dist/AIProjectAdmin-5K5NIQNT.js +828 -0
  3. package/dist/AppHeader-4SN5M6SZ.js +834 -0
  4. package/dist/BoxPlot-DBJA6TQF.js +1218 -0
  5. package/dist/CorrelationVolcano-MDMTMTT5.js +618 -0
  6. package/dist/DE-S5AFNI4I.js +94 -0
  7. package/dist/DEinput-XVBBA74N.js +300 -0
  8. package/dist/DifferentialAnalysis-TUBGPAB2.js +244 -0
  9. package/dist/DifferentialAnalysis-TUBGPAB2.js.map +7 -0
  10. package/dist/Disco-VV7FQ7WW.js +3236 -0
  11. package/dist/Disco.UI-JDJFJFEY.js +244 -0
  12. package/dist/DmrPlot-XOG67W74.js +641 -0
  13. package/dist/GB-K3AWZQFF.js +1129 -0
  14. package/dist/GeneExpInput-Y7MDS2CA.js +365 -0
  15. package/dist/HicApp-53OTZ3YU.js +2249 -0
  16. package/dist/NumBinaryEditor-SB4YR3JM.js +269 -0
  17. package/dist/NumBinaryEditor.unit.spec-V2W2OZYP.js +285 -0
  18. package/dist/NumContEditor-RZZBM7PR.js +106 -0
  19. package/dist/NumContEditor.unit.spec-GAAW3ZZN.js +168 -0
  20. package/dist/NumCustomBinEditor-GFCGPRPI.js +37 -0
  21. package/dist/NumCustomBinEditor.unit.spec-24MXSO3L.js +283 -0
  22. package/dist/NumDiscreteEditor-HAHIOFNC.js +178 -0
  23. package/dist/NumDiscreteEditor.unit.spec-JYN2CWSI.js +201 -0
  24. package/dist/NumRegularBinEditor-7DOE64RB.js +37 -0
  25. package/dist/NumRegularBinEditor.unit.spec-2WU4GGNT.js +226 -0
  26. package/dist/NumSplineEditor-JLRD5TVX.js +191 -0
  27. package/dist/NumSplineEditor.unit.spec-LOG7CECJ.js +198 -0
  28. package/dist/NumericDensity-IDOP7I34.js +37 -0
  29. package/dist/NumericDensity.unit.spec-HTJQRPVH.js +220 -0
  30. package/dist/NumericHandler-DWVVGLLB.js +38 -0
  31. package/dist/NumericHandler.unit.spec-BDDFTHOF.js +218 -0
  32. package/dist/ProteomeInput-PK4ZM3SZ.js +395 -0
  33. package/dist/ProteomeInput-PK4ZM3SZ.js.map +7 -0
  34. package/dist/RunChart2-PBJ56YX3.js +757 -0
  35. package/dist/SC-UC3HP2MY.js +830 -0
  36. package/dist/SC-UC3HP2MY.js.map +7 -0
  37. package/dist/Volcano-BZJCA53R.js +1314 -0
  38. package/dist/Volcano-BZJCA53R.js.map +7 -0
  39. package/dist/WSIViewer-OHOP2DZT.js +48475 -0
  40. package/dist/WSIViewer-OHOP2DZT.js.map +7 -0
  41. package/dist/WsiSamplesPlot-FOMPMEXK.js +164 -0
  42. package/dist/adSandbox-SRPPCYYR.js +37 -0
  43. package/dist/alphaGenome-IS2WAJCK.js +174 -0
  44. package/dist/app-GTHYSGWI.js +36 -0
  45. package/dist/app-XEKETNLG.js +48 -0
  46. package/dist/app.js +20 -20
  47. package/dist/bam-GQBFL6A7.js +859 -0
  48. package/dist/barchart-AESC4JSX.js +46 -0
  49. package/dist/barchart.data-RE34IC4G.js +22 -0
  50. package/dist/barchart.events-KM4J5ISO.js +46 -0
  51. package/dist/barchart.integration.spec-DFVSBGO3.js +1676 -0
  52. package/dist/barchart2-NNTL4RQZ.js +310 -0
  53. package/dist/block-EHZM3FUX.js +6201 -0
  54. package/dist/block.init-EAEFNNF6.js +37 -0
  55. package/dist/block.mds.expressionrank-ZBHA2CFE.js +358 -0
  56. package/dist/block.mds.geneboxplot-4ZU3QUAK.js +827 -0
  57. package/dist/block.mds.junction-PDH55JXO.js +1544 -0
  58. package/dist/block.mds.svcnv-QWBU54XQ.js +6800 -0
  59. package/dist/block.svg-HUGBYWXU.js +163 -0
  60. package/dist/block.tk.aicheck-SDCWXQZF.js +282 -0
  61. package/dist/block.tk.ase-HMUTHCJS.js +364 -0
  62. package/dist/block.tk.bam-Q7B2YQLI.js +1905 -0
  63. package/dist/block.tk.bedgraphdot-QBGBSVHN.js +383 -0
  64. package/dist/block.tk.bigwig.ui-767A3MUH.js +211 -0
  65. package/dist/block.tk.hicstraw-LEZUZHLF.js +822 -0
  66. package/dist/block.tk.junction-GQHCZOYR.js +2363 -0
  67. package/dist/block.tk.junction.textmatrixui-D5QUO7KQ.js +198 -0
  68. package/dist/block.tk.ld-E3MHZOG5.js +98 -0
  69. package/dist/block.tk.menu-XE7PFYGR.js +1028 -0
  70. package/dist/block.tk.pgv-MPPMPDED.js +943 -0
  71. package/dist/brainImaging-YQ443NOL.js +422 -0
  72. package/dist/chunk-26WXJBSR.js +228 -0
  73. package/dist/chunk-2P6Z7JFC.js +119 -0
  74. package/dist/chunk-2QQO4RRD.js +2681 -0
  75. package/dist/chunk-2T7VYQLY.js +281 -0
  76. package/dist/chunk-2T7VYQLY.js.map +7 -0
  77. package/dist/chunk-2XPDA6NL.js +20652 -0
  78. package/dist/chunk-2XPDA6NL.js.map +7 -0
  79. package/dist/chunk-37ARSZOI.js +2815 -0
  80. package/dist/chunk-42Q53PXE.js +381 -0
  81. package/dist/chunk-46ASPS5Y.js +386 -0
  82. package/dist/chunk-4KPI7PB5.js +142 -0
  83. package/dist/chunk-4MDNMCGZ.js +102 -0
  84. package/dist/chunk-5IG3E4DT.js +272 -0
  85. package/dist/chunk-5MIR7IHI.js +52 -0
  86. package/dist/chunk-5MZVXJVA.js +55 -0
  87. package/dist/chunk-66D5GRS5.js +263 -0
  88. package/dist/chunk-6ATE2TRC.js +534 -0
  89. package/dist/chunk-6BFR6MK3.js +158 -0
  90. package/dist/chunk-6NJMCO4X.js +335 -0
  91. package/dist/chunk-6ON5KAMO.js +54 -0
  92. package/dist/chunk-76GPYMHZ.js +102 -0
  93. package/dist/chunk-7AAFBFOH.js +147 -0
  94. package/dist/chunk-7OOZHEUC.js +302 -0
  95. package/dist/chunk-A4VLWLYF.js +226 -0
  96. package/dist/chunk-A6EFWGWD.js +444 -0
  97. package/dist/chunk-ALW5XXVW.js +170 -0
  98. package/dist/chunk-ANCT2BGO.js +34 -0
  99. package/dist/chunk-AROMXWCY.js +291 -0
  100. package/dist/chunk-AY4UBGLC.js +815 -0
  101. package/dist/chunk-B43MTEYB.js +84 -0
  102. package/dist/chunk-B43MTEYB.js.map +7 -0
  103. package/dist/chunk-BMVLR3TM.js +1210 -0
  104. package/dist/chunk-BR7JA2EO.js +621 -0
  105. package/dist/chunk-C3SYSMNE.js +42 -0
  106. package/dist/chunk-C3SYSMNE.js.map +7 -0
  107. package/dist/chunk-D3HJXMTH.js +17 -0
  108. package/dist/chunk-DKUEZ4XD.js +205 -0
  109. package/dist/chunk-DT3MMC5U.js +31 -0
  110. package/dist/chunk-DYVKN7EE.js +5000 -0
  111. package/dist/chunk-EF37UZY6.js +37 -0
  112. package/dist/chunk-ESXMS7FW.js +229 -0
  113. package/dist/chunk-FDK4UJMN.js +263 -0
  114. package/dist/chunk-FDK4UJMN.js.map +7 -0
  115. package/dist/chunk-FUSVXQ6C.js +368 -0
  116. package/dist/chunk-G7JRRTS5.js +170 -0
  117. package/dist/chunk-G7JRRTS5.js.map +7 -0
  118. package/dist/chunk-GHWHLSUX.js +192 -0
  119. package/dist/chunk-GHWHLSUX.js.map +7 -0
  120. package/dist/chunk-GXKVAPGP.js +2786 -0
  121. package/dist/chunk-H4JIENLQ.js +39 -0
  122. package/dist/chunk-H7YJG4YM.js +470 -0
  123. package/dist/chunk-I24KPIDD.js +148 -0
  124. package/dist/chunk-IENFDUWD.js +203 -0
  125. package/dist/chunk-IKHIY6IZ.js +2327 -0
  126. package/dist/chunk-IKHIY6IZ.js.map +7 -0
  127. package/dist/chunk-J7BISJTL.js +50 -0
  128. package/dist/chunk-J7KYOSEK.js +824 -0
  129. package/dist/chunk-JGPZ5254.js +371 -0
  130. package/dist/chunk-JUIPCWAM.js +194 -0
  131. package/dist/chunk-LO4NMQ7W.js +293 -0
  132. package/dist/chunk-LSSLS5HV.js +95 -0
  133. package/dist/chunk-MDLRB3MR.js +407 -0
  134. package/dist/chunk-MJLKGZ27.js +129 -0
  135. package/dist/chunk-MYWJQRTD.js +1849 -0
  136. package/dist/chunk-MYWJQRTD.js.map +7 -0
  137. package/dist/chunk-NL5T3SBK.js +4209 -0
  138. package/dist/chunk-NMBIT4IK.js +46 -0
  139. package/dist/chunk-NMBIT4IK.js.map +7 -0
  140. package/dist/chunk-ONAYJVN2.js +217 -0
  141. package/dist/chunk-PP7K4R2E.js +141 -0
  142. package/dist/chunk-PP7K4R2E.js.map +7 -0
  143. package/dist/chunk-PSMFOARZ.js +14 -0
  144. package/dist/chunk-QX3GF2IA.js +514 -0
  145. package/dist/chunk-QZ2U4BOS.js +1159 -0
  146. package/dist/chunk-RBZBBNLL.js +1087 -0
  147. package/dist/chunk-RQ2ZJ66W.js +276 -0
  148. package/dist/chunk-RQ2ZJ66W.js.map +7 -0
  149. package/dist/chunk-RZTFQXWV.js +117 -0
  150. package/dist/chunk-SJC2C77V.js +177 -0
  151. package/dist/chunk-THUXB7EE.js +698 -0
  152. package/dist/chunk-THUXB7EE.js.map +7 -0
  153. package/dist/chunk-TVXVP4M6.js +215 -0
  154. package/dist/chunk-UTDPKDIY.js +482 -0
  155. package/dist/chunk-UVIUB7QI.js +280 -0
  156. package/dist/chunk-VAUSRBL5.js +6364 -0
  157. package/dist/chunk-VP3IZVQA.js +54 -0
  158. package/dist/chunk-VP3IZVQA.js.map +7 -0
  159. package/dist/chunk-WP22GYZ2.js +446 -0
  160. package/dist/chunk-WUNX3VST.js +1271 -0
  161. package/dist/chunk-X7GDCYND.js +1561 -0
  162. package/dist/chunk-X7GDCYND.js.map +7 -0
  163. package/dist/chunk-XB3V6S2X.js +1230 -0
  164. package/dist/chunk-XB3V6S2X.js.map +7 -0
  165. package/dist/chunk-XD4TBJK2.js +455 -0
  166. package/dist/chunk-Y6DSXMPB.js +121 -0
  167. package/dist/chunk-YBIZRASR.js +252 -0
  168. package/dist/chunk-YI2YH7ZK.js +158 -0
  169. package/dist/chunk-YLDE3PVC.js +1943 -0
  170. package/dist/chunk-Z736NYXL.js +26 -0
  171. package/dist/chunk-ZEJB7CPC.js +95 -0
  172. package/dist/chunk-ZGWEBKZ4.js +100 -0
  173. package/dist/condition-FSF6ROJV.js +331 -0
  174. package/dist/controls-OPSBFDFZ.js +40 -0
  175. package/dist/controls.config-3QRV5363.js +38 -0
  176. package/dist/correlation-WLOI7Z35.js +97 -0
  177. package/dist/cuminc-G2UGJUUA.js +1148 -0
  178. package/dist/cuminc.integration.spec-X5NEZ6S5.js +677 -0
  179. package/dist/customdata.inputui-RNW3AO3Z.js +288 -0
  180. package/dist/dataDownload-4U3TGDMH.js +329 -0
  181. package/dist/dataDownload.integration.spec-6FUI2SJ4.js +192 -0
  182. package/dist/databrowser.ui-4GVJVJWG.js +432 -0
  183. package/dist/dictionary-NSDS7Z4K.js +110 -0
  184. package/dist/dnaMethylation-OYQB75LD.js +37 -0
  185. package/dist/dnaMethylation.integration.spec-6TTLV34N.js +202 -0
  186. package/dist/dofetch-4TO3QMT6.js +50 -0
  187. package/dist/e2pca-NYBVR6PL.js +349 -0
  188. package/dist/ep-RTDVEA4D.js +1255 -0
  189. package/dist/expclust.gdc.spec-JVIRESTP.js +306 -0
  190. package/dist/facet-OVBF2QMO.js +520 -0
  191. package/dist/forms2-HTLS54CX.js +533 -0
  192. package/dist/gb-Y3546HMZ.js +87 -0
  193. package/dist/geneExpClustering-PH3PWH3K.js +248 -0
  194. package/dist/geneExpression-2Z2EV3XM.js +37 -0
  195. package/dist/geneExpression-6CFXOCGW.js +312 -0
  196. package/dist/geneExpression.unit.spec-WKUTHRHC.js +101 -0
  197. package/dist/geneORA-SHLZESLB.js +277 -0
  198. package/dist/geneVariant-FHZUIFPM.js +38 -0
  199. package/dist/geneVariant-Y7ZUBEOX.js +40 -0
  200. package/dist/geneVariant.integration.spec-N7TZUOY3.js +197 -0
  201. package/dist/genefusion.ui-7PDVZPZ2.js +308 -0
  202. package/dist/geneset-HLVOGYUI.js +202 -0
  203. package/dist/genomeBrowser.spec-7IVIMUR5.js +280 -0
  204. package/dist/grin2-2GNWIYFU.js +845 -0
  205. package/dist/grin2-2GNWIYFU.js.map +7 -0
  206. package/dist/grin2-Z5O7254R.js +1555 -0
  207. package/dist/gsea-TFC3MBRW.js +46 -0
  208. package/dist/hierCluster-ERSE5I4I.js +62 -0
  209. package/dist/hierCluster-QQZQU5ZG.js +58 -0
  210. package/dist/hierCluster.config-WPINWW37.js +39 -0
  211. package/dist/hierCluster.integration.spec-Y6OHSKPW.js +394 -0
  212. package/dist/hierCluster.interactivity-HS3G5QC5.js +53 -0
  213. package/dist/hierCluster.renderers-W63ZKZTT.js +21 -0
  214. package/dist/imagePlot-QFVN25PM.js +162 -0
  215. package/dist/importPlot-MIDM5APH.js +8 -0
  216. package/dist/isoformExpression-L4TRNT4A.js +39 -0
  217. package/dist/isoformExpression.unit.spec-QQG323LA.js +207 -0
  218. package/dist/launch.adhoc-4NQ6GGGL.js +41 -0
  219. package/dist/leftlabel.sample-JU7AIPZL.js +259 -0
  220. package/dist/legacyDataset-TT4CHF23.js +119 -0
  221. package/dist/lollipop-JG74M6PJ.js +170 -0
  222. package/dist/maf-PDL2EGHI.js +451 -0
  223. package/dist/maftimeline-V43NQEEE.js +592 -0
  224. package/dist/matrix-EB2EFP4S.js +57 -0
  225. package/dist/matrix-Q57FU5FE.js +62 -0
  226. package/dist/matrix.cells-NJIMPD32.js +28 -0
  227. package/dist/matrix.config-GLDEQD3H.js +40 -0
  228. package/dist/matrix.data-6SHAKOQU.js +25 -0
  229. package/dist/matrix.groups-MTDEANQA.js +26 -0
  230. package/dist/matrix.integration.spec-JCZ5VQJU.js +3071 -0
  231. package/dist/matrix.interactivity-SVRNWL6V.js +41 -0
  232. package/dist/matrix.layout-2HREO42N.js +43 -0
  233. package/dist/matrix.legend-QHVKT3MP.js +22 -0
  234. package/dist/matrix.renderers-IYR3ZY6V.js +37 -0
  235. package/dist/matrix.serieses-2VMTQXL2.js +21 -0
  236. package/dist/matrix.sort-PWA2RQQR.js +27 -0
  237. package/dist/matrix.sort.unit.spec-3OYIPTFY.js +471 -0
  238. package/dist/matrix.sorterUi-Y5QLO75X.js +18 -0
  239. package/dist/matrix.sorterUi.unit.spec-BNEXQHLP.js +341 -0
  240. package/dist/mavb-IZDDU4KK.js +731 -0
  241. package/dist/mds.fimo-FWBL7JE6.js +517 -0
  242. package/dist/mds.samplescatterplot-T47C7DJB.js +1549 -0
  243. package/dist/mds.survivalplot-MFZJCGS6.js +482 -0
  244. package/dist/numericDictTermCluster-I2W67RGA.js +72 -0
  245. package/dist/oncomatrix-6W7IBAED.js +294 -0
  246. package/dist/oncomatrix.spec-CEFH5IGH.js +447 -0
  247. package/dist/plot.2dvaf-BN6CFLNU.js +376 -0
  248. package/dist/plot.app-7EYWUCZV.js +40 -0
  249. package/dist/plot.barplot-MDIARSQD.js +101 -0
  250. package/dist/plot.boxplot-RUHGXC54.js +151 -0
  251. package/dist/plot.brainImaging-JEE32ZBV.js +51 -0
  252. package/dist/plot.disco-2RPNPX6E.js +101 -0
  253. package/dist/plot.dzi-7VTYYGGW.js +33 -0
  254. package/dist/plot.ssgq-FHE5KU5C.js +138 -0
  255. package/dist/plot.vaf2cov-WDJJM5Q4.js +258 -0
  256. package/dist/plot.wsi-FQZWHNSF.js +36 -0
  257. package/dist/polar-M7EGINN4.js +185 -0
  258. package/dist/polar2-JFYY43K2.js +227 -0
  259. package/dist/profile.spec-SIOHASOX.js +79 -0
  260. package/dist/profileBarchart-6JLEKVJV.js +266 -0
  261. package/dist/profileForms-G6CH73RV.js +440 -0
  262. package/dist/profilePlot-NQYJOBVV.js +53 -0
  263. package/dist/profileRadar-4TNWIXDB.js +262 -0
  264. package/dist/profileRadarFacility-XPH3LCBQ.js +262 -0
  265. package/dist/proteinView-OZLHO45J.js +1222 -0
  266. package/dist/proteinView-OZLHO45J.js.map +7 -0
  267. package/dist/proteomeAbundance-NQ4635NL.js +12 -0
  268. package/dist/proteomeAbundance-OV24UTZN.js +59 -0
  269. package/dist/proteomeAbundance-OV24UTZN.js.map +7 -0
  270. package/dist/qualitative-DL4WJG3O.js +42 -0
  271. package/dist/radar2-YNOQWHBT.js +315 -0
  272. package/dist/radarFacility2-24UPSI7S.js +324 -0
  273. package/dist/regression-URAUTLTD.js +55 -0
  274. package/dist/regression.inputs-UDVOU7FB.js +47 -0
  275. package/dist/regression.inputs.term-BWW6W34R.js +47 -0
  276. package/dist/regression.inputs.values.table-UKGIZTXG.js +44 -0
  277. package/dist/regression.integration.spec-EBHQTNA3.js +783 -0
  278. package/dist/regression.results-XTOSWIP6.js +39 -0
  279. package/dist/regression.spec-KG2I53VR.js +707 -0
  280. package/dist/report-KH7SNPVF.js +221 -0
  281. package/dist/sampleScatter.spec-PIXGS3LG.js +201 -0
  282. package/dist/sampleView-TWS6VT55.js +47 -0
  283. package/dist/samplelst-6AB5Y4WR.js +110 -0
  284. package/dist/samplematrix-AJAF555E.js +2197 -0
  285. package/dist/sc-PMNYZKXA.js +85 -0
  286. package/dist/scatter-Q2GH3ZJD.js +801 -0
  287. package/dist/scatter.integration.spec-SMMYKWH3.js +1195 -0
  288. package/dist/selectGenomeWithTklst-VE4SDYY7.js +133 -0
  289. package/dist/singleCellCellType-S324GCKW.js +37 -0
  290. package/dist/singleCellCellType.unit.spec-NXC2GELH.js +159 -0
  291. package/dist/singleCellGeneExpression-6H4HRKIA.js +37 -0
  292. package/dist/singleCellGeneExpression.unit.spec-HIJXVUWJ.js +152 -0
  293. package/dist/singleCellPlot-H7PCZ2DP.js +52 -0
  294. package/dist/singlecell-4LH3MQVL.js +85 -0
  295. package/dist/singlecell-MOSYT3RI.js +1571 -0
  296. package/dist/snp-IKLGTD4Q.js +37 -0
  297. package/dist/snp.unit.spec-GC74MUVM.js +175 -0
  298. package/dist/snplocus-RIABFSBQ.js +207 -0
  299. package/dist/spliceevent.a53ss.diagram-4E2IYYHL.js +150 -0
  300. package/dist/spliceevent.exonskip.diagram-C56R6XLQ.js +276 -0
  301. package/dist/spliceevent.noeventdiagram-SIPMAKXI.js +459 -0
  302. package/dist/ssGSEA-5QNHLSOI.js +37 -0
  303. package/dist/ssGSEA.unit.spec-KVPN553B.js +87 -0
  304. package/dist/summarizeCnvGeneexp-K4VGJSW6.js +162 -0
  305. package/dist/summarizeGeneexpSurvival-HGHX65FN.js +107 -0
  306. package/dist/summarizeMutationCnv-3K4Z6R2X.js +163 -0
  307. package/dist/summarizeMutationDiagnosis-M2MHUPRT.js +39 -0
  308. package/dist/summarizeMutationSurvival-WVBUP3GA.js +98 -0
  309. package/dist/summary-RZHZXCU5.js +48 -0
  310. package/dist/summary.integration.spec-FGZP7DY7.js +413 -0
  311. package/dist/summaryInput-UGM7MMCR.js +234 -0
  312. package/dist/sunburst-L27U7LV7.js +283 -0
  313. package/dist/survival-5ZMEBV6O.js +57 -0
  314. package/dist/survival-JWRRGTJT.js +45 -0
  315. package/dist/survival.integration.spec-Z5542I4V.js +801 -0
  316. package/dist/svgraph-O6ZVLNNN.js +1386 -0
  317. package/dist/svmr-ULFV7OSH.js +3841 -0
  318. package/dist/table-CHRQH2GH.js +199 -0
  319. package/dist/termCollection-FAO6ZA6F.js +178 -0
  320. package/dist/termCollection-GBXS3GOY.js +37 -0
  321. package/dist/termCollection.unit.spec-4WRTOV6E.js +207 -0
  322. package/dist/tk-KNUBWRNK.js +45 -0
  323. package/dist/tp.ui-2PPYOQYL.js +1458 -0
  324. package/dist/tvs.density-BZ5SKDQS.js +18 -0
  325. package/dist/tvs.dt-TDNSTGQR.js +38 -0
  326. package/dist/tvs.dtcnv.categorical-P2IGIE4I.js +39 -0
  327. package/dist/tvs.dtcnv.continuous-2XUCRBDR.js +71 -0
  328. package/dist/tvs.dtfusion-PRHZVMOG.js +39 -0
  329. package/dist/tvs.dtsnvindel-KGKBW5JS.js +39 -0
  330. package/dist/tvs.dtsv-M3CY5TZF.js +39 -0
  331. package/dist/tvs.numeric-W74JCC5P.js +21 -0
  332. package/dist/tvs.samplelst-BTWFBBAN.js +103 -0
  333. package/dist/tvs.termCollection-Y64QIKOA.js +158 -0
  334. package/dist/violin-3LLHHV3L.js +45 -0
  335. package/dist/violin.integration.spec-6NF5FDLQ.js +1424 -0
  336. package/dist/violin.interactivity-W2AKZ24D.js +37 -0
  337. package/dist/violin.renderer-CRFYYZRI.js +39 -0
  338. package/dist/vocabulary-AUJOAVYS.js +40 -0
  339. package/package.json +4 -3
  340. package/dist/2dmaf-DTWWXOZC.js +0 -1372
  341. package/dist/AIProjectAdmin-BCYIWOXD.js +0 -828
  342. package/dist/AppHeader-H3L2MRWP.js +0 -834
  343. package/dist/BoxPlot-INZ6IN3V.js +0 -1218
  344. package/dist/CorrelationVolcano-AK3XW4ZH.js +0 -618
  345. package/dist/DE-IBSFUKNG.js +0 -94
  346. package/dist/DEinput-H4GMQWDY.js +0 -300
  347. package/dist/DifferentialAnalysis-3DSL5LQC.js +0 -243
  348. package/dist/DifferentialAnalysis-3DSL5LQC.js.map +0 -7
  349. package/dist/Disco-5PXXMGGQ.js +0 -3236
  350. package/dist/Disco.UI-23LOT2U6.js +0 -244
  351. package/dist/DmrPlot-PBCU2XNF.js +0 -641
  352. package/dist/GB-HIEPWNPV.js +0 -1129
  353. package/dist/GeneExpInput-A4JNX7PU.js +0 -365
  354. package/dist/HicApp-IDH2A4BC.js +0 -2249
  355. package/dist/NumBinaryEditor-CZ54X7J3.js +0 -269
  356. package/dist/NumBinaryEditor.unit.spec-QLBRM7MJ.js +0 -285
  357. package/dist/NumContEditor-Z5MGLQ2I.js +0 -106
  358. package/dist/NumContEditor.unit.spec-TR7D7ULV.js +0 -168
  359. package/dist/NumCustomBinEditor-B7JID42Y.js +0 -37
  360. package/dist/NumCustomBinEditor.unit.spec-GZJIVY4K.js +0 -283
  361. package/dist/NumDiscreteEditor-LWHZ36T6.js +0 -178
  362. package/dist/NumDiscreteEditor.unit.spec-QCQCMEWO.js +0 -201
  363. package/dist/NumRegularBinEditor-IATRIUKD.js +0 -37
  364. package/dist/NumRegularBinEditor.unit.spec-J6UTQO76.js +0 -226
  365. package/dist/NumSplineEditor-2KMU6SRO.js +0 -191
  366. package/dist/NumSplineEditor.unit.spec-MX7Y4MTD.js +0 -198
  367. package/dist/NumericDensity-JCH7F5FV.js +0 -37
  368. package/dist/NumericDensity.unit.spec-4TKKRKHF.js +0 -220
  369. package/dist/NumericHandler-7FB3RJM7.js +0 -38
  370. package/dist/NumericHandler.unit.spec-U6DCADZY.js +0 -218
  371. package/dist/RunChart2-VQTIVMKM.js +0 -757
  372. package/dist/SC-XW272KAP.js +0 -827
  373. package/dist/SC-XW272KAP.js.map +0 -7
  374. package/dist/Volcano-Y4U3L6D2.js +0 -1352
  375. package/dist/Volcano-Y4U3L6D2.js.map +0 -7
  376. package/dist/WSIViewer-UFB7TI2D.js +0 -47972
  377. package/dist/WSIViewer-UFB7TI2D.js.map +0 -7
  378. package/dist/WsiSamplesPlot-2OAR57YB.js +0 -164
  379. package/dist/adSandbox-IKKFYRF7.js +0 -37
  380. package/dist/alphaGenome-WJNFQGGK.js +0 -174
  381. package/dist/app-UHGTFH6D.js +0 -48
  382. package/dist/app-YETYAR45.js +0 -36
  383. package/dist/bam-S6U7VNJP.js +0 -859
  384. package/dist/barchart-3NJDGHXU.js +0 -46
  385. package/dist/barchart.data-MVVKPDLE.js +0 -22
  386. package/dist/barchart.events-WQGA4CGB.js +0 -46
  387. package/dist/barchart.integration.spec-E6CJTWRN.js +0 -1676
  388. package/dist/barchart2-UNHFOYKB.js +0 -310
  389. package/dist/block-2XHZLY26.js +0 -6201
  390. package/dist/block.init-CMG4V6RB.js +0 -37
  391. package/dist/block.mds.expressionrank-QX2JOEMV.js +0 -358
  392. package/dist/block.mds.geneboxplot-USVQSDBT.js +0 -827
  393. package/dist/block.mds.junction-R6GJO75N.js +0 -1544
  394. package/dist/block.mds.svcnv-MRISSDAX.js +0 -6800
  395. package/dist/block.svg-Z5KKZTDB.js +0 -163
  396. package/dist/block.tk.aicheck-SOFJYYZX.js +0 -282
  397. package/dist/block.tk.ase-EHX5FV2Y.js +0 -364
  398. package/dist/block.tk.bam-DJS6LODM.js +0 -1905
  399. package/dist/block.tk.bedgraphdot-R2YHPXZA.js +0 -383
  400. package/dist/block.tk.bigwig.ui-VPEEQJLS.js +0 -211
  401. package/dist/block.tk.hicstraw-BDYN573B.js +0 -822
  402. package/dist/block.tk.junction-BONB4BXU.js +0 -2363
  403. package/dist/block.tk.junction.textmatrixui-Y5R6KY4N.js +0 -198
  404. package/dist/block.tk.ld-EGVVSXCB.js +0 -98
  405. package/dist/block.tk.menu-4YBMB5JT.js +0 -1028
  406. package/dist/block.tk.pgv-SBHGL6UH.js +0 -943
  407. package/dist/brainImaging-G3WZDYG6.js +0 -422
  408. package/dist/chunk-2K5DSRBJ.js +0 -84
  409. package/dist/chunk-2K5DSRBJ.js.map +0 -7
  410. package/dist/chunk-2O6JF76T.js +0 -121
  411. package/dist/chunk-2QULGYVE.js +0 -368
  412. package/dist/chunk-2VLGHVOL.js +0 -215
  413. package/dist/chunk-32TTOWY6.js +0 -1210
  414. package/dist/chunk-43PMSEMV.js +0 -50
  415. package/dist/chunk-4KSU6NBP.js +0 -194
  416. package/dist/chunk-4SFX42S7.js +0 -1271
  417. package/dist/chunk-4Y444IRJ.js +0 -272
  418. package/dist/chunk-56AN5PPQ.js +0 -679
  419. package/dist/chunk-56AN5PPQ.js.map +0 -7
  420. package/dist/chunk-5FO3NKA4.js +0 -155
  421. package/dist/chunk-5FO3NKA4.js.map +0 -7
  422. package/dist/chunk-5HOR6JQ2.js +0 -100
  423. package/dist/chunk-5LZKQFLO.js +0 -180
  424. package/dist/chunk-5LZKQFLO.js.map +0 -7
  425. package/dist/chunk-5RE3J6HK.js +0 -293
  426. package/dist/chunk-5SMOOFRW.js +0 -386
  427. package/dist/chunk-64Z22QAH.js +0 -14
  428. package/dist/chunk-6NMH6WPB.js +0 -446
  429. package/dist/chunk-7FKIAQ4K.js +0 -17
  430. package/dist/chunk-7NOKTEHK.js +0 -407
  431. package/dist/chunk-7UHUOC6F.js +0 -119
  432. package/dist/chunk-AMYSEKPF.js +0 -1658
  433. package/dist/chunk-AMYSEKPF.js.map +0 -7
  434. package/dist/chunk-ANGDY7VC.js +0 -170
  435. package/dist/chunk-AQ4OP4GR.js +0 -39
  436. package/dist/chunk-AQVOYTLS.js +0 -177
  437. package/dist/chunk-ARINZFQG.js +0 -276
  438. package/dist/chunk-ARINZFQG.js.map +0 -7
  439. package/dist/chunk-BQJVLXEL.js +0 -55
  440. package/dist/chunk-BRMASRRS.js +0 -455
  441. package/dist/chunk-BT4OOYPT.js +0 -280
  442. package/dist/chunk-BTJFVY3R.js +0 -190
  443. package/dist/chunk-BTJFVY3R.js.map +0 -7
  444. package/dist/chunk-C62CSWMV.js +0 -335
  445. package/dist/chunk-CAWDQURD.js +0 -6364
  446. package/dist/chunk-DMAHNBGN.js +0 -1230
  447. package/dist/chunk-DMAHNBGN.js.map +0 -7
  448. package/dist/chunk-EGWVYY7K.js +0 -264
  449. package/dist/chunk-EGWVYY7K.js.map +0 -7
  450. package/dist/chunk-ENWVV6EU.js +0 -2681
  451. package/dist/chunk-EPOELG75.js +0 -56
  452. package/dist/chunk-EPOELG75.js.map +0 -7
  453. package/dist/chunk-FA44G3GZ.js +0 -470
  454. package/dist/chunk-GD7FKXOA.js +0 -148
  455. package/dist/chunk-GF4OSOYW.js +0 -2815
  456. package/dist/chunk-GQOBT2W7.js +0 -203
  457. package/dist/chunk-GTBL7UHX.js +0 -2786
  458. package/dist/chunk-HE7CD7BD.js +0 -482
  459. package/dist/chunk-I7JDV4ZC.js +0 -226
  460. package/dist/chunk-IABWKPRK.js +0 -534
  461. package/dist/chunk-IPDH4FHY.js +0 -54
  462. package/dist/chunk-JNOOLCYB.js +0 -1159
  463. package/dist/chunk-JPKYHLNI.js +0 -158
  464. package/dist/chunk-KMQ6GQ3I.js +0 -1943
  465. package/dist/chunk-KTCW3JA6.js +0 -4209
  466. package/dist/chunk-L4QG7XZE.js +0 -46
  467. package/dist/chunk-L4QG7XZE.js.map +0 -7
  468. package/dist/chunk-LGUE54VX.js +0 -302
  469. package/dist/chunk-LJ4AUJXC.js +0 -95
  470. package/dist/chunk-LN3QYBGI.js +0 -20495
  471. package/dist/chunk-LN3QYBGI.js.map +0 -7
  472. package/dist/chunk-LQQSRNR5.js +0 -228
  473. package/dist/chunk-LSV4Z473.js +0 -31
  474. package/dist/chunk-LTSR7SLO.js +0 -514
  475. package/dist/chunk-LY7GD74F.js +0 -381
  476. package/dist/chunk-MHCTLVGE.js +0 -26
  477. package/dist/chunk-MSAMGAQF.js +0 -2370
  478. package/dist/chunk-MSAMGAQF.js.map +0 -7
  479. package/dist/chunk-NYX4B5CO.js +0 -291
  480. package/dist/chunk-OPPNZXYG.js +0 -129
  481. package/dist/chunk-P6TPXUMP.js +0 -117
  482. package/dist/chunk-PL2CM7RY.js +0 -621
  483. package/dist/chunk-PSGQWZN4.js +0 -147
  484. package/dist/chunk-PZLYNNST.js +0 -371
  485. package/dist/chunk-RA4RQYXQ.js +0 -142
  486. package/dist/chunk-RAJZYWFN.js +0 -95
  487. package/dist/chunk-ROLVOPVR.js +0 -252
  488. package/dist/chunk-RQZJIBIH.js +0 -34
  489. package/dist/chunk-RSE2FOKW.js +0 -217
  490. package/dist/chunk-SDLRTORS.js +0 -263
  491. package/dist/chunk-TF4EDNQO.js +0 -158
  492. package/dist/chunk-TV74I3Y5.js +0 -43
  493. package/dist/chunk-TV74I3Y5.js.map +0 -7
  494. package/dist/chunk-UPPBAFUK.js +0 -5000
  495. package/dist/chunk-UVPAZM3G.js +0 -52
  496. package/dist/chunk-UWYCEYML.js +0 -815
  497. package/dist/chunk-VB3SRNBK.js +0 -37
  498. package/dist/chunk-W6XQR5UL.js +0 -444
  499. package/dist/chunk-XBBUQW52.js +0 -824
  500. package/dist/chunk-XSA3VIEQ.js +0 -205
  501. package/dist/chunk-XZ6MGJQ3.js +0 -102
  502. package/dist/chunk-YC6ZJ7RP.js +0 -1842
  503. package/dist/chunk-YC6ZJ7RP.js.map +0 -7
  504. package/dist/chunk-YEMIL6QU.js +0 -1087
  505. package/dist/chunk-ZD47FENE.js +0 -229
  506. package/dist/chunk-ZYBM24FU.js +0 -102
  507. package/dist/chunk-ZYY54HBU.js +0 -330
  508. package/dist/chunk-ZYY54HBU.js.map +0 -7
  509. package/dist/condition-ARCN26MF.js +0 -331
  510. package/dist/controls-PKWN2JGN.js +0 -40
  511. package/dist/controls.config-NFRPXFUJ.js +0 -38
  512. package/dist/correlation-DPT6XL2U.js +0 -97
  513. package/dist/cuminc-M4U7LQD5.js +0 -1148
  514. package/dist/cuminc.integration.spec-MH4OFYDJ.js +0 -677
  515. package/dist/customdata.inputui-6TAHAMSV.js +0 -288
  516. package/dist/dataDownload-7GZEYSUT.js +0 -329
  517. package/dist/dataDownload.integration.spec-NAIJRFTV.js +0 -192
  518. package/dist/databrowser.ui-LLXHZ5O6.js +0 -432
  519. package/dist/dictionary-MUAURMYE.js +0 -110
  520. package/dist/dnaMethylation-AU5D3U3E.js +0 -37
  521. package/dist/dnaMethylation.integration.spec-JIDBRA6P.js +0 -202
  522. package/dist/dofetch-WSYK5OTB.js +0 -50
  523. package/dist/e2pca-ICG35YR5.js +0 -349
  524. package/dist/ep-CSSSQOUP.js +0 -1255
  525. package/dist/expclust.gdc.spec-4WPQUXH4.js +0 -306
  526. package/dist/facet-JAGILNY6.js +0 -520
  527. package/dist/forms2-IMVDB6AT.js +0 -533
  528. package/dist/gb-36LTYICV.js +0 -87
  529. package/dist/geneExpClustering-CGMENTHI.js +0 -248
  530. package/dist/geneExpression-AD2L46J4.js +0 -37
  531. package/dist/geneExpression-G2FHBDUQ.js +0 -312
  532. package/dist/geneExpression.unit.spec-XWCB7K5L.js +0 -101
  533. package/dist/geneORA-GVHQF7DF.js +0 -277
  534. package/dist/geneVariant-HE22CH76.js +0 -40
  535. package/dist/geneVariant-SQD5QUFH.js +0 -38
  536. package/dist/geneVariant.integration.spec-66XFLDNN.js +0 -197
  537. package/dist/genefusion.ui-TD32NWD4.js +0 -308
  538. package/dist/geneset-NSYPDXS3.js +0 -202
  539. package/dist/genomeBrowser.spec-CYFONLNQ.js +0 -280
  540. package/dist/grin2-3QB57OPH.js +0 -1555
  541. package/dist/grin2-FLQNWPMZ.js +0 -851
  542. package/dist/grin2-FLQNWPMZ.js.map +0 -7
  543. package/dist/gsea-RMTU5I3U.js +0 -46
  544. package/dist/hierCluster-LSQL6PGC.js +0 -58
  545. package/dist/hierCluster-XTEBDEVO.js +0 -62
  546. package/dist/hierCluster.config-SHXFSPOH.js +0 -39
  547. package/dist/hierCluster.integration.spec-KNMIYWV3.js +0 -394
  548. package/dist/hierCluster.interactivity-6NAKTUR5.js +0 -53
  549. package/dist/hierCluster.renderers-FWOV4Q47.js +0 -21
  550. package/dist/imagePlot-3IVG4SFN.js +0 -162
  551. package/dist/importPlot-HEMDRIVF.js +0 -8
  552. package/dist/isoformExpression-FJ3GEU6D.js +0 -39
  553. package/dist/isoformExpression.unit.spec-L7D22UDB.js +0 -207
  554. package/dist/launch.adhoc-PDGQF2UP.js +0 -41
  555. package/dist/leftlabel.sample-ZBI4NHCV.js +0 -259
  556. package/dist/legacyDataset-PBCPC5I7.js +0 -119
  557. package/dist/lollipop-K7S6ASFE.js +0 -170
  558. package/dist/maf-JEW6PPJB.js +0 -451
  559. package/dist/maftimeline-7URL27MC.js +0 -592
  560. package/dist/matrix-6EK5WGIG.js +0 -57
  561. package/dist/matrix-DKBD5RIL.js +0 -62
  562. package/dist/matrix.cells-KEIOXJQ7.js +0 -28
  563. package/dist/matrix.config-FGJB4VVM.js +0 -40
  564. package/dist/matrix.data-QGCGFLD7.js +0 -25
  565. package/dist/matrix.groups-HBPLZ2QX.js +0 -26
  566. package/dist/matrix.integration.spec-R4PF67KF.js +0 -3071
  567. package/dist/matrix.interactivity-M3SY33ET.js +0 -41
  568. package/dist/matrix.layout-H6WQ3ZMW.js +0 -43
  569. package/dist/matrix.legend-UCL7HM26.js +0 -22
  570. package/dist/matrix.renderers-3PPFSS7Z.js +0 -37
  571. package/dist/matrix.serieses-S2TJ3E6P.js +0 -21
  572. package/dist/matrix.sort-CFA4UWBJ.js +0 -27
  573. package/dist/matrix.sort.unit.spec-562VIWDS.js +0 -471
  574. package/dist/matrix.sorterUi-FT7K5664.js +0 -18
  575. package/dist/matrix.sorterUi.unit.spec-GAHHUN3K.js +0 -341
  576. package/dist/mavb-HPW5X55U.js +0 -731
  577. package/dist/mds.fimo-HSBKLIOX.js +0 -517
  578. package/dist/mds.samplescatterplot-DE27OMJE.js +0 -1549
  579. package/dist/mds.survivalplot-IW22UGCE.js +0 -482
  580. package/dist/numericDictTermCluster-DOD66G3A.js +0 -72
  581. package/dist/oncomatrix-BZCVCPR4.js +0 -294
  582. package/dist/oncomatrix.spec-IHYCIAP4.js +0 -447
  583. package/dist/plot.2dvaf-QLOZ54VC.js +0 -376
  584. package/dist/plot.app-XDVDR23J.js +0 -40
  585. package/dist/plot.barplot-XOESF7OQ.js +0 -101
  586. package/dist/plot.boxplot-VNOC2CHT.js +0 -151
  587. package/dist/plot.brainImaging-7ZEOY4UR.js +0 -51
  588. package/dist/plot.disco-6GVDYK7A.js +0 -101
  589. package/dist/plot.dzi-TEFPPPL6.js +0 -33
  590. package/dist/plot.ssgq-OG4TODLO.js +0 -138
  591. package/dist/plot.vaf2cov-VMZRJULA.js +0 -258
  592. package/dist/plot.wsi-2CHZZ7AC.js +0 -36
  593. package/dist/polar-QUYQRQOQ.js +0 -185
  594. package/dist/polar2-OXXLAXJC.js +0 -227
  595. package/dist/profile.spec-TI6PRHNJ.js +0 -79
  596. package/dist/profileBarchart-GEK77XEB.js +0 -266
  597. package/dist/profileForms-NR3VNHKM.js +0 -440
  598. package/dist/profilePlot-GGKO3IW5.js +0 -53
  599. package/dist/profileRadar-MN3LX5ER.js +0 -262
  600. package/dist/profileRadarFacility-3G2HWB2L.js +0 -262
  601. package/dist/proteinView-TZ5BGOTA.js +0 -1188
  602. package/dist/proteinView-TZ5BGOTA.js.map +0 -7
  603. package/dist/proteomeAbundance-JXNECXF7.js +0 -68
  604. package/dist/proteomeAbundance-JXNECXF7.js.map +0 -7
  605. package/dist/proteomeAbundance-O4BB55O3.js +0 -21
  606. package/dist/qualitative-Q3TT73O7.js +0 -42
  607. package/dist/radar2-LSD3VPZT.js +0 -315
  608. package/dist/radarFacility2-LZGIXY7A.js +0 -324
  609. package/dist/regression-J3XDAPAZ.js +0 -55
  610. package/dist/regression.inputs-BBZYI5OI.js +0 -47
  611. package/dist/regression.inputs.term-7BW6XGLG.js +0 -47
  612. package/dist/regression.inputs.values.table-DYX2YU4H.js +0 -44
  613. package/dist/regression.integration.spec-WLXZYKWW.js +0 -783
  614. package/dist/regression.results-K5Q2N2KW.js +0 -39
  615. package/dist/regression.spec-VT7T6KBY.js +0 -707
  616. package/dist/report-3D3L573D.js +0 -221
  617. package/dist/sampleScatter.spec-6IPJQLM2.js +0 -201
  618. package/dist/sampleView-5JMFI4HF.js +0 -47
  619. package/dist/samplelst-SUCB5WOZ.js +0 -110
  620. package/dist/samplematrix-A5SZBKO6.js +0 -2197
  621. package/dist/sc-NAA6ESO6.js +0 -85
  622. package/dist/scatter-EQCN2HYE.js +0 -801
  623. package/dist/scatter.integration.spec-7NXIYS67.js +0 -1195
  624. package/dist/selectGenomeWithTklst-KXODNCY6.js +0 -133
  625. package/dist/singleCellCellType-HMIW76YB.js +0 -37
  626. package/dist/singleCellCellType.unit.spec-ZCZET56X.js +0 -159
  627. package/dist/singleCellGeneExpression-IUCUHF6R.js +0 -37
  628. package/dist/singleCellGeneExpression.unit.spec-J4D6F2N3.js +0 -152
  629. package/dist/singleCellPlot-L6W3MDGG.js +0 -52
  630. package/dist/singlecell-A6ECAAPI.js +0 -85
  631. package/dist/singlecell-KBABNXC5.js +0 -1571
  632. package/dist/snp-RO7ATG6E.js +0 -37
  633. package/dist/snp.unit.spec-ZJLRGJD4.js +0 -175
  634. package/dist/snplocus-N3CU6NRP.js +0 -207
  635. package/dist/spliceevent.a53ss.diagram-7PHT4COB.js +0 -150
  636. package/dist/spliceevent.exonskip.diagram-3CZTY6QD.js +0 -276
  637. package/dist/spliceevent.noeventdiagram-GQE256DT.js +0 -459
  638. package/dist/ssGSEA-4I3L5MX2.js +0 -37
  639. package/dist/ssGSEA.unit.spec-PZCC5YU7.js +0 -87
  640. package/dist/summarizeCnvGeneexp-ASXUQW56.js +0 -162
  641. package/dist/summarizeGeneexpSurvival-ULGUOW5V.js +0 -107
  642. package/dist/summarizeMutationCnv-VDUCIUGM.js +0 -163
  643. package/dist/summarizeMutationDiagnosis-FMAAMCZC.js +0 -39
  644. package/dist/summarizeMutationSurvival-GZ4NGDJT.js +0 -98
  645. package/dist/summary-2WNZ6JSB.js +0 -48
  646. package/dist/summary.integration.spec-XPMYB6GM.js +0 -413
  647. package/dist/summaryInput-2UGXEA5C.js +0 -234
  648. package/dist/sunburst-76WCQLTT.js +0 -283
  649. package/dist/survival-23IZM4ML.js +0 -45
  650. package/dist/survival-3EAMPHSX.js +0 -57
  651. package/dist/survival.integration.spec-YNVAKBV3.js +0 -801
  652. package/dist/svgraph-G2M5LXEP.js +0 -1386
  653. package/dist/svmr-BUDBVU34.js +0 -3841
  654. package/dist/table-QJSZ6YFK.js +0 -199
  655. package/dist/termCollection-2YAY3RLZ.js +0 -178
  656. package/dist/termCollection-MAMDMEDD.js +0 -37
  657. package/dist/termCollection.unit.spec-UY7G2BHG.js +0 -207
  658. package/dist/tk-GFGP3F76.js +0 -45
  659. package/dist/tp.ui-OQ757UIE.js +0 -1458
  660. package/dist/tvs.density-BJK23JYJ.js +0 -18
  661. package/dist/tvs.dt-TOYEFKNT.js +0 -38
  662. package/dist/tvs.dtcnv.categorical-EO2VLFL2.js +0 -39
  663. package/dist/tvs.dtcnv.continuous-ZAHTKZ4Y.js +0 -71
  664. package/dist/tvs.dtfusion-BY3AHBL3.js +0 -39
  665. package/dist/tvs.dtsnvindel-UM5LQ4FR.js +0 -39
  666. package/dist/tvs.dtsv-H7ZVHLS5.js +0 -39
  667. package/dist/tvs.numeric-66FP6RRH.js +0 -21
  668. package/dist/tvs.samplelst-Q5ECTZOY.js +0 -103
  669. package/dist/tvs.termCollection-FYNMKZTR.js +0 -158
  670. package/dist/violin-EGWLAJVM.js +0 -45
  671. package/dist/violin.integration.spec-3P4TYHBR.js +0 -1424
  672. package/dist/violin.interactivity-VWDR4LYB.js +0 -37
  673. package/dist/violin.renderer-WWTU6J7X.js +0 -39
  674. package/dist/vocabulary-JG4ZITOH.js +0 -40
  675. /package/dist/{2dmaf-DTWWXOZC.js.map → 2dmaf-6YIEXAIG.js.map} +0 -0
  676. /package/dist/{AIProjectAdmin-BCYIWOXD.js.map → AIProjectAdmin-5K5NIQNT.js.map} +0 -0
  677. /package/dist/{AppHeader-H3L2MRWP.js.map → AppHeader-4SN5M6SZ.js.map} +0 -0
  678. /package/dist/{BoxPlot-INZ6IN3V.js.map → BoxPlot-DBJA6TQF.js.map} +0 -0
  679. /package/dist/{CorrelationVolcano-AK3XW4ZH.js.map → CorrelationVolcano-MDMTMTT5.js.map} +0 -0
  680. /package/dist/{DE-IBSFUKNG.js.map → DE-S5AFNI4I.js.map} +0 -0
  681. /package/dist/{DEinput-H4GMQWDY.js.map → DEinput-XVBBA74N.js.map} +0 -0
  682. /package/dist/{Disco-5PXXMGGQ.js.map → Disco-VV7FQ7WW.js.map} +0 -0
  683. /package/dist/{Disco.UI-23LOT2U6.js.map → Disco.UI-JDJFJFEY.js.map} +0 -0
  684. /package/dist/{DmrPlot-PBCU2XNF.js.map → DmrPlot-XOG67W74.js.map} +0 -0
  685. /package/dist/{GB-HIEPWNPV.js.map → GB-K3AWZQFF.js.map} +0 -0
  686. /package/dist/{GeneExpInput-A4JNX7PU.js.map → GeneExpInput-Y7MDS2CA.js.map} +0 -0
  687. /package/dist/{HicApp-IDH2A4BC.js.map → HicApp-53OTZ3YU.js.map} +0 -0
  688. /package/dist/{NumBinaryEditor-CZ54X7J3.js.map → NumBinaryEditor-SB4YR3JM.js.map} +0 -0
  689. /package/dist/{NumBinaryEditor.unit.spec-QLBRM7MJ.js.map → NumBinaryEditor.unit.spec-V2W2OZYP.js.map} +0 -0
  690. /package/dist/{NumContEditor-Z5MGLQ2I.js.map → NumContEditor-RZZBM7PR.js.map} +0 -0
  691. /package/dist/{NumContEditor.unit.spec-TR7D7ULV.js.map → NumContEditor.unit.spec-GAAW3ZZN.js.map} +0 -0
  692. /package/dist/{NumCustomBinEditor-B7JID42Y.js.map → NumCustomBinEditor-GFCGPRPI.js.map} +0 -0
  693. /package/dist/{NumCustomBinEditor.unit.spec-GZJIVY4K.js.map → NumCustomBinEditor.unit.spec-24MXSO3L.js.map} +0 -0
  694. /package/dist/{NumDiscreteEditor-LWHZ36T6.js.map → NumDiscreteEditor-HAHIOFNC.js.map} +0 -0
  695. /package/dist/{NumDiscreteEditor.unit.spec-QCQCMEWO.js.map → NumDiscreteEditor.unit.spec-JYN2CWSI.js.map} +0 -0
  696. /package/dist/{NumRegularBinEditor-IATRIUKD.js.map → NumRegularBinEditor-7DOE64RB.js.map} +0 -0
  697. /package/dist/{NumRegularBinEditor.unit.spec-J6UTQO76.js.map → NumRegularBinEditor.unit.spec-2WU4GGNT.js.map} +0 -0
  698. /package/dist/{NumSplineEditor-2KMU6SRO.js.map → NumSplineEditor-JLRD5TVX.js.map} +0 -0
  699. /package/dist/{NumSplineEditor.unit.spec-MX7Y4MTD.js.map → NumSplineEditor.unit.spec-LOG7CECJ.js.map} +0 -0
  700. /package/dist/{NumericDensity-JCH7F5FV.js.map → NumericDensity-IDOP7I34.js.map} +0 -0
  701. /package/dist/{NumericDensity.unit.spec-4TKKRKHF.js.map → NumericDensity.unit.spec-HTJQRPVH.js.map} +0 -0
  702. /package/dist/{NumericHandler-7FB3RJM7.js.map → NumericHandler-DWVVGLLB.js.map} +0 -0
  703. /package/dist/{NumericHandler.unit.spec-U6DCADZY.js.map → NumericHandler.unit.spec-BDDFTHOF.js.map} +0 -0
  704. /package/dist/{RunChart2-VQTIVMKM.js.map → RunChart2-PBJ56YX3.js.map} +0 -0
  705. /package/dist/{WsiSamplesPlot-2OAR57YB.js.map → WsiSamplesPlot-FOMPMEXK.js.map} +0 -0
  706. /package/dist/{adSandbox-IKKFYRF7.js.map → adSandbox-SRPPCYYR.js.map} +0 -0
  707. /package/dist/{alphaGenome-WJNFQGGK.js.map → alphaGenome-IS2WAJCK.js.map} +0 -0
  708. /package/dist/{app-UHGTFH6D.js.map → app-GTHYSGWI.js.map} +0 -0
  709. /package/dist/{app-YETYAR45.js.map → app-XEKETNLG.js.map} +0 -0
  710. /package/dist/{bam-S6U7VNJP.js.map → bam-GQBFL6A7.js.map} +0 -0
  711. /package/dist/{barchart-3NJDGHXU.js.map → barchart-AESC4JSX.js.map} +0 -0
  712. /package/dist/{barchart.data-MVVKPDLE.js.map → barchart.data-RE34IC4G.js.map} +0 -0
  713. /package/dist/{barchart.events-WQGA4CGB.js.map → barchart.events-KM4J5ISO.js.map} +0 -0
  714. /package/dist/{barchart.integration.spec-E6CJTWRN.js.map → barchart.integration.spec-DFVSBGO3.js.map} +0 -0
  715. /package/dist/{barchart2-UNHFOYKB.js.map → barchart2-NNTL4RQZ.js.map} +0 -0
  716. /package/dist/{block-2XHZLY26.js.map → block-EHZM3FUX.js.map} +0 -0
  717. /package/dist/{block.init-CMG4V6RB.js.map → block.init-EAEFNNF6.js.map} +0 -0
  718. /package/dist/{block.mds.expressionrank-QX2JOEMV.js.map → block.mds.expressionrank-ZBHA2CFE.js.map} +0 -0
  719. /package/dist/{block.mds.geneboxplot-USVQSDBT.js.map → block.mds.geneboxplot-4ZU3QUAK.js.map} +0 -0
  720. /package/dist/{block.mds.junction-R6GJO75N.js.map → block.mds.junction-PDH55JXO.js.map} +0 -0
  721. /package/dist/{block.mds.svcnv-MRISSDAX.js.map → block.mds.svcnv-QWBU54XQ.js.map} +0 -0
  722. /package/dist/{block.svg-Z5KKZTDB.js.map → block.svg-HUGBYWXU.js.map} +0 -0
  723. /package/dist/{block.tk.aicheck-SOFJYYZX.js.map → block.tk.aicheck-SDCWXQZF.js.map} +0 -0
  724. /package/dist/{block.tk.ase-EHX5FV2Y.js.map → block.tk.ase-HMUTHCJS.js.map} +0 -0
  725. /package/dist/{block.tk.bam-DJS6LODM.js.map → block.tk.bam-Q7B2YQLI.js.map} +0 -0
  726. /package/dist/{block.tk.bedgraphdot-R2YHPXZA.js.map → block.tk.bedgraphdot-QBGBSVHN.js.map} +0 -0
  727. /package/dist/{block.tk.bigwig.ui-VPEEQJLS.js.map → block.tk.bigwig.ui-767A3MUH.js.map} +0 -0
  728. /package/dist/{block.tk.hicstraw-BDYN573B.js.map → block.tk.hicstraw-LEZUZHLF.js.map} +0 -0
  729. /package/dist/{block.tk.junction-BONB4BXU.js.map → block.tk.junction-GQHCZOYR.js.map} +0 -0
  730. /package/dist/{block.tk.junction.textmatrixui-Y5R6KY4N.js.map → block.tk.junction.textmatrixui-D5QUO7KQ.js.map} +0 -0
  731. /package/dist/{block.tk.ld-EGVVSXCB.js.map → block.tk.ld-E3MHZOG5.js.map} +0 -0
  732. /package/dist/{block.tk.menu-4YBMB5JT.js.map → block.tk.menu-XE7PFYGR.js.map} +0 -0
  733. /package/dist/{block.tk.pgv-SBHGL6UH.js.map → block.tk.pgv-MPPMPDED.js.map} +0 -0
  734. /package/dist/{brainImaging-G3WZDYG6.js.map → brainImaging-YQ443NOL.js.map} +0 -0
  735. /package/dist/{chunk-LQQSRNR5.js.map → chunk-26WXJBSR.js.map} +0 -0
  736. /package/dist/{chunk-7UHUOC6F.js.map → chunk-2P6Z7JFC.js.map} +0 -0
  737. /package/dist/{chunk-ENWVV6EU.js.map → chunk-2QQO4RRD.js.map} +0 -0
  738. /package/dist/{chunk-GF4OSOYW.js.map → chunk-37ARSZOI.js.map} +0 -0
  739. /package/dist/{chunk-LY7GD74F.js.map → chunk-42Q53PXE.js.map} +0 -0
  740. /package/dist/{chunk-5SMOOFRW.js.map → chunk-46ASPS5Y.js.map} +0 -0
  741. /package/dist/{chunk-RA4RQYXQ.js.map → chunk-4KPI7PB5.js.map} +0 -0
  742. /package/dist/{chunk-XZ6MGJQ3.js.map → chunk-4MDNMCGZ.js.map} +0 -0
  743. /package/dist/{chunk-4Y444IRJ.js.map → chunk-5IG3E4DT.js.map} +0 -0
  744. /package/dist/{chunk-UVPAZM3G.js.map → chunk-5MIR7IHI.js.map} +0 -0
  745. /package/dist/{chunk-BQJVLXEL.js.map → chunk-5MZVXJVA.js.map} +0 -0
  746. /package/dist/{chunk-SDLRTORS.js.map → chunk-66D5GRS5.js.map} +0 -0
  747. /package/dist/{chunk-IABWKPRK.js.map → chunk-6ATE2TRC.js.map} +0 -0
  748. /package/dist/{chunk-JPKYHLNI.js.map → chunk-6BFR6MK3.js.map} +0 -0
  749. /package/dist/{chunk-C62CSWMV.js.map → chunk-6NJMCO4X.js.map} +0 -0
  750. /package/dist/{chunk-IPDH4FHY.js.map → chunk-6ON5KAMO.js.map} +0 -0
  751. /package/dist/{chunk-ZYBM24FU.js.map → chunk-76GPYMHZ.js.map} +0 -0
  752. /package/dist/{chunk-PSGQWZN4.js.map → chunk-7AAFBFOH.js.map} +0 -0
  753. /package/dist/{chunk-LGUE54VX.js.map → chunk-7OOZHEUC.js.map} +0 -0
  754. /package/dist/{chunk-I7JDV4ZC.js.map → chunk-A4VLWLYF.js.map} +0 -0
  755. /package/dist/{chunk-W6XQR5UL.js.map → chunk-A6EFWGWD.js.map} +0 -0
  756. /package/dist/{chunk-ANGDY7VC.js.map → chunk-ALW5XXVW.js.map} +0 -0
  757. /package/dist/{chunk-RQZJIBIH.js.map → chunk-ANCT2BGO.js.map} +0 -0
  758. /package/dist/{chunk-NYX4B5CO.js.map → chunk-AROMXWCY.js.map} +0 -0
  759. /package/dist/{chunk-UWYCEYML.js.map → chunk-AY4UBGLC.js.map} +0 -0
  760. /package/dist/{chunk-32TTOWY6.js.map → chunk-BMVLR3TM.js.map} +0 -0
  761. /package/dist/{chunk-PL2CM7RY.js.map → chunk-BR7JA2EO.js.map} +0 -0
  762. /package/dist/{chunk-7FKIAQ4K.js.map → chunk-D3HJXMTH.js.map} +0 -0
  763. /package/dist/{chunk-XSA3VIEQ.js.map → chunk-DKUEZ4XD.js.map} +0 -0
  764. /package/dist/{chunk-LSV4Z473.js.map → chunk-DT3MMC5U.js.map} +0 -0
  765. /package/dist/{chunk-UPPBAFUK.js.map → chunk-DYVKN7EE.js.map} +0 -0
  766. /package/dist/{chunk-VB3SRNBK.js.map → chunk-EF37UZY6.js.map} +0 -0
  767. /package/dist/{chunk-ZD47FENE.js.map → chunk-ESXMS7FW.js.map} +0 -0
  768. /package/dist/{chunk-2QULGYVE.js.map → chunk-FUSVXQ6C.js.map} +0 -0
  769. /package/dist/{chunk-GTBL7UHX.js.map → chunk-GXKVAPGP.js.map} +0 -0
  770. /package/dist/{chunk-AQ4OP4GR.js.map → chunk-H4JIENLQ.js.map} +0 -0
  771. /package/dist/{chunk-FA44G3GZ.js.map → chunk-H7YJG4YM.js.map} +0 -0
  772. /package/dist/{chunk-GD7FKXOA.js.map → chunk-I24KPIDD.js.map} +0 -0
  773. /package/dist/{chunk-GQOBT2W7.js.map → chunk-IENFDUWD.js.map} +0 -0
  774. /package/dist/{chunk-43PMSEMV.js.map → chunk-J7BISJTL.js.map} +0 -0
  775. /package/dist/{chunk-XBBUQW52.js.map → chunk-J7KYOSEK.js.map} +0 -0
  776. /package/dist/{chunk-PZLYNNST.js.map → chunk-JGPZ5254.js.map} +0 -0
  777. /package/dist/{chunk-4KSU6NBP.js.map → chunk-JUIPCWAM.js.map} +0 -0
  778. /package/dist/{chunk-5RE3J6HK.js.map → chunk-LO4NMQ7W.js.map} +0 -0
  779. /package/dist/{chunk-RAJZYWFN.js.map → chunk-LSSLS5HV.js.map} +0 -0
  780. /package/dist/{chunk-7NOKTEHK.js.map → chunk-MDLRB3MR.js.map} +0 -0
  781. /package/dist/{chunk-OPPNZXYG.js.map → chunk-MJLKGZ27.js.map} +0 -0
  782. /package/dist/{chunk-KTCW3JA6.js.map → chunk-NL5T3SBK.js.map} +0 -0
  783. /package/dist/{chunk-RSE2FOKW.js.map → chunk-ONAYJVN2.js.map} +0 -0
  784. /package/dist/{chunk-64Z22QAH.js.map → chunk-PSMFOARZ.js.map} +0 -0
  785. /package/dist/{chunk-LTSR7SLO.js.map → chunk-QX3GF2IA.js.map} +0 -0
  786. /package/dist/{chunk-JNOOLCYB.js.map → chunk-QZ2U4BOS.js.map} +0 -0
  787. /package/dist/{chunk-YEMIL6QU.js.map → chunk-RBZBBNLL.js.map} +0 -0
  788. /package/dist/{chunk-P6TPXUMP.js.map → chunk-RZTFQXWV.js.map} +0 -0
  789. /package/dist/{chunk-AQVOYTLS.js.map → chunk-SJC2C77V.js.map} +0 -0
  790. /package/dist/{chunk-2VLGHVOL.js.map → chunk-TVXVP4M6.js.map} +0 -0
  791. /package/dist/{chunk-HE7CD7BD.js.map → chunk-UTDPKDIY.js.map} +0 -0
  792. /package/dist/{chunk-BT4OOYPT.js.map → chunk-UVIUB7QI.js.map} +0 -0
  793. /package/dist/{chunk-CAWDQURD.js.map → chunk-VAUSRBL5.js.map} +0 -0
  794. /package/dist/{chunk-6NMH6WPB.js.map → chunk-WP22GYZ2.js.map} +0 -0
  795. /package/dist/{chunk-4SFX42S7.js.map → chunk-WUNX3VST.js.map} +0 -0
  796. /package/dist/{chunk-BRMASRRS.js.map → chunk-XD4TBJK2.js.map} +0 -0
  797. /package/dist/{chunk-2O6JF76T.js.map → chunk-Y6DSXMPB.js.map} +0 -0
  798. /package/dist/{chunk-ROLVOPVR.js.map → chunk-YBIZRASR.js.map} +0 -0
  799. /package/dist/{chunk-TF4EDNQO.js.map → chunk-YI2YH7ZK.js.map} +0 -0
  800. /package/dist/{chunk-KMQ6GQ3I.js.map → chunk-YLDE3PVC.js.map} +0 -0
  801. /package/dist/{chunk-MHCTLVGE.js.map → chunk-Z736NYXL.js.map} +0 -0
  802. /package/dist/{chunk-LJ4AUJXC.js.map → chunk-ZEJB7CPC.js.map} +0 -0
  803. /package/dist/{chunk-5HOR6JQ2.js.map → chunk-ZGWEBKZ4.js.map} +0 -0
  804. /package/dist/{condition-ARCN26MF.js.map → condition-FSF6ROJV.js.map} +0 -0
  805. /package/dist/{controls-PKWN2JGN.js.map → controls-OPSBFDFZ.js.map} +0 -0
  806. /package/dist/{controls.config-NFRPXFUJ.js.map → controls.config-3QRV5363.js.map} +0 -0
  807. /package/dist/{correlation-DPT6XL2U.js.map → correlation-WLOI7Z35.js.map} +0 -0
  808. /package/dist/{cuminc-M4U7LQD5.js.map → cuminc-G2UGJUUA.js.map} +0 -0
  809. /package/dist/{cuminc.integration.spec-MH4OFYDJ.js.map → cuminc.integration.spec-X5NEZ6S5.js.map} +0 -0
  810. /package/dist/{customdata.inputui-6TAHAMSV.js.map → customdata.inputui-RNW3AO3Z.js.map} +0 -0
  811. /package/dist/{dataDownload-7GZEYSUT.js.map → dataDownload-4U3TGDMH.js.map} +0 -0
  812. /package/dist/{dataDownload.integration.spec-NAIJRFTV.js.map → dataDownload.integration.spec-6FUI2SJ4.js.map} +0 -0
  813. /package/dist/{databrowser.ui-LLXHZ5O6.js.map → databrowser.ui-4GVJVJWG.js.map} +0 -0
  814. /package/dist/{dictionary-MUAURMYE.js.map → dictionary-NSDS7Z4K.js.map} +0 -0
  815. /package/dist/{dnaMethylation-AU5D3U3E.js.map → dnaMethylation-OYQB75LD.js.map} +0 -0
  816. /package/dist/{dnaMethylation.integration.spec-JIDBRA6P.js.map → dnaMethylation.integration.spec-6TTLV34N.js.map} +0 -0
  817. /package/dist/{dofetch-WSYK5OTB.js.map → dofetch-4TO3QMT6.js.map} +0 -0
  818. /package/dist/{e2pca-ICG35YR5.js.map → e2pca-NYBVR6PL.js.map} +0 -0
  819. /package/dist/{ep-CSSSQOUP.js.map → ep-RTDVEA4D.js.map} +0 -0
  820. /package/dist/{expclust.gdc.spec-4WPQUXH4.js.map → expclust.gdc.spec-JVIRESTP.js.map} +0 -0
  821. /package/dist/{facet-JAGILNY6.js.map → facet-OVBF2QMO.js.map} +0 -0
  822. /package/dist/{forms2-IMVDB6AT.js.map → forms2-HTLS54CX.js.map} +0 -0
  823. /package/dist/{gb-36LTYICV.js.map → gb-Y3546HMZ.js.map} +0 -0
  824. /package/dist/{geneExpClustering-CGMENTHI.js.map → geneExpClustering-PH3PWH3K.js.map} +0 -0
  825. /package/dist/{geneExpression-AD2L46J4.js.map → geneExpression-2Z2EV3XM.js.map} +0 -0
  826. /package/dist/{geneExpression-G2FHBDUQ.js.map → geneExpression-6CFXOCGW.js.map} +0 -0
  827. /package/dist/{geneExpression.unit.spec-XWCB7K5L.js.map → geneExpression.unit.spec-WKUTHRHC.js.map} +0 -0
  828. /package/dist/{geneORA-GVHQF7DF.js.map → geneORA-SHLZESLB.js.map} +0 -0
  829. /package/dist/{geneVariant-HE22CH76.js.map → geneVariant-FHZUIFPM.js.map} +0 -0
  830. /package/dist/{geneVariant-SQD5QUFH.js.map → geneVariant-Y7ZUBEOX.js.map} +0 -0
  831. /package/dist/{geneVariant.integration.spec-66XFLDNN.js.map → geneVariant.integration.spec-N7TZUOY3.js.map} +0 -0
  832. /package/dist/{genefusion.ui-TD32NWD4.js.map → genefusion.ui-7PDVZPZ2.js.map} +0 -0
  833. /package/dist/{geneset-NSYPDXS3.js.map → geneset-HLVOGYUI.js.map} +0 -0
  834. /package/dist/{genomeBrowser.spec-CYFONLNQ.js.map → genomeBrowser.spec-7IVIMUR5.js.map} +0 -0
  835. /package/dist/{grin2-3QB57OPH.js.map → grin2-Z5O7254R.js.map} +0 -0
  836. /package/dist/{gsea-RMTU5I3U.js.map → gsea-TFC3MBRW.js.map} +0 -0
  837. /package/dist/{hierCluster-LSQL6PGC.js.map → hierCluster-ERSE5I4I.js.map} +0 -0
  838. /package/dist/{hierCluster-XTEBDEVO.js.map → hierCluster-QQZQU5ZG.js.map} +0 -0
  839. /package/dist/{hierCluster.config-SHXFSPOH.js.map → hierCluster.config-WPINWW37.js.map} +0 -0
  840. /package/dist/{hierCluster.integration.spec-KNMIYWV3.js.map → hierCluster.integration.spec-Y6OHSKPW.js.map} +0 -0
  841. /package/dist/{hierCluster.interactivity-6NAKTUR5.js.map → hierCluster.interactivity-HS3G5QC5.js.map} +0 -0
  842. /package/dist/{hierCluster.renderers-FWOV4Q47.js.map → hierCluster.renderers-W63ZKZTT.js.map} +0 -0
  843. /package/dist/{imagePlot-3IVG4SFN.js.map → imagePlot-QFVN25PM.js.map} +0 -0
  844. /package/dist/{importPlot-HEMDRIVF.js.map → importPlot-MIDM5APH.js.map} +0 -0
  845. /package/dist/{isoformExpression-FJ3GEU6D.js.map → isoformExpression-L4TRNT4A.js.map} +0 -0
  846. /package/dist/{isoformExpression.unit.spec-L7D22UDB.js.map → isoformExpression.unit.spec-QQG323LA.js.map} +0 -0
  847. /package/dist/{launch.adhoc-PDGQF2UP.js.map → launch.adhoc-4NQ6GGGL.js.map} +0 -0
  848. /package/dist/{leftlabel.sample-ZBI4NHCV.js.map → leftlabel.sample-JU7AIPZL.js.map} +0 -0
  849. /package/dist/{legacyDataset-PBCPC5I7.js.map → legacyDataset-TT4CHF23.js.map} +0 -0
  850. /package/dist/{lollipop-K7S6ASFE.js.map → lollipop-JG74M6PJ.js.map} +0 -0
  851. /package/dist/{maf-JEW6PPJB.js.map → maf-PDL2EGHI.js.map} +0 -0
  852. /package/dist/{maftimeline-7URL27MC.js.map → maftimeline-V43NQEEE.js.map} +0 -0
  853. /package/dist/{matrix-6EK5WGIG.js.map → matrix-EB2EFP4S.js.map} +0 -0
  854. /package/dist/{matrix-DKBD5RIL.js.map → matrix-Q57FU5FE.js.map} +0 -0
  855. /package/dist/{matrix.cells-KEIOXJQ7.js.map → matrix.cells-NJIMPD32.js.map} +0 -0
  856. /package/dist/{matrix.config-FGJB4VVM.js.map → matrix.config-GLDEQD3H.js.map} +0 -0
  857. /package/dist/{matrix.data-QGCGFLD7.js.map → matrix.data-6SHAKOQU.js.map} +0 -0
  858. /package/dist/{matrix.groups-HBPLZ2QX.js.map → matrix.groups-MTDEANQA.js.map} +0 -0
  859. /package/dist/{matrix.integration.spec-R4PF67KF.js.map → matrix.integration.spec-JCZ5VQJU.js.map} +0 -0
  860. /package/dist/{matrix.interactivity-M3SY33ET.js.map → matrix.interactivity-SVRNWL6V.js.map} +0 -0
  861. /package/dist/{matrix.layout-H6WQ3ZMW.js.map → matrix.layout-2HREO42N.js.map} +0 -0
  862. /package/dist/{matrix.legend-UCL7HM26.js.map → matrix.legend-QHVKT3MP.js.map} +0 -0
  863. /package/dist/{matrix.renderers-3PPFSS7Z.js.map → matrix.renderers-IYR3ZY6V.js.map} +0 -0
  864. /package/dist/{matrix.serieses-S2TJ3E6P.js.map → matrix.serieses-2VMTQXL2.js.map} +0 -0
  865. /package/dist/{matrix.sort-CFA4UWBJ.js.map → matrix.sort-PWA2RQQR.js.map} +0 -0
  866. /package/dist/{matrix.sort.unit.spec-562VIWDS.js.map → matrix.sort.unit.spec-3OYIPTFY.js.map} +0 -0
  867. /package/dist/{matrix.sorterUi-FT7K5664.js.map → matrix.sorterUi-Y5QLO75X.js.map} +0 -0
  868. /package/dist/{matrix.sorterUi.unit.spec-GAHHUN3K.js.map → matrix.sorterUi.unit.spec-BNEXQHLP.js.map} +0 -0
  869. /package/dist/{mavb-HPW5X55U.js.map → mavb-IZDDU4KK.js.map} +0 -0
  870. /package/dist/{mds.fimo-HSBKLIOX.js.map → mds.fimo-FWBL7JE6.js.map} +0 -0
  871. /package/dist/{mds.samplescatterplot-DE27OMJE.js.map → mds.samplescatterplot-T47C7DJB.js.map} +0 -0
  872. /package/dist/{mds.survivalplot-IW22UGCE.js.map → mds.survivalplot-MFZJCGS6.js.map} +0 -0
  873. /package/dist/{numericDictTermCluster-DOD66G3A.js.map → numericDictTermCluster-I2W67RGA.js.map} +0 -0
  874. /package/dist/{oncomatrix-BZCVCPR4.js.map → oncomatrix-6W7IBAED.js.map} +0 -0
  875. /package/dist/{oncomatrix.spec-IHYCIAP4.js.map → oncomatrix.spec-CEFH5IGH.js.map} +0 -0
  876. /package/dist/{plot.2dvaf-QLOZ54VC.js.map → plot.2dvaf-BN6CFLNU.js.map} +0 -0
  877. /package/dist/{plot.app-XDVDR23J.js.map → plot.app-7EYWUCZV.js.map} +0 -0
  878. /package/dist/{plot.barplot-XOESF7OQ.js.map → plot.barplot-MDIARSQD.js.map} +0 -0
  879. /package/dist/{plot.boxplot-VNOC2CHT.js.map → plot.boxplot-RUHGXC54.js.map} +0 -0
  880. /package/dist/{plot.brainImaging-7ZEOY4UR.js.map → plot.brainImaging-JEE32ZBV.js.map} +0 -0
  881. /package/dist/{plot.disco-6GVDYK7A.js.map → plot.disco-2RPNPX6E.js.map} +0 -0
  882. /package/dist/{plot.dzi-TEFPPPL6.js.map → plot.dzi-7VTYYGGW.js.map} +0 -0
  883. /package/dist/{plot.ssgq-OG4TODLO.js.map → plot.ssgq-FHE5KU5C.js.map} +0 -0
  884. /package/dist/{plot.vaf2cov-VMZRJULA.js.map → plot.vaf2cov-WDJJM5Q4.js.map} +0 -0
  885. /package/dist/{plot.wsi-2CHZZ7AC.js.map → plot.wsi-FQZWHNSF.js.map} +0 -0
  886. /package/dist/{polar-QUYQRQOQ.js.map → polar-M7EGINN4.js.map} +0 -0
  887. /package/dist/{polar2-OXXLAXJC.js.map → polar2-JFYY43K2.js.map} +0 -0
  888. /package/dist/{profile.spec-TI6PRHNJ.js.map → profile.spec-SIOHASOX.js.map} +0 -0
  889. /package/dist/{profileBarchart-GEK77XEB.js.map → profileBarchart-6JLEKVJV.js.map} +0 -0
  890. /package/dist/{profileForms-NR3VNHKM.js.map → profileForms-G6CH73RV.js.map} +0 -0
  891. /package/dist/{profilePlot-GGKO3IW5.js.map → profilePlot-NQYJOBVV.js.map} +0 -0
  892. /package/dist/{profileRadar-MN3LX5ER.js.map → profileRadar-4TNWIXDB.js.map} +0 -0
  893. /package/dist/{profileRadarFacility-3G2HWB2L.js.map → profileRadarFacility-XPH3LCBQ.js.map} +0 -0
  894. /package/dist/{proteomeAbundance-O4BB55O3.js.map → proteomeAbundance-NQ4635NL.js.map} +0 -0
  895. /package/dist/{qualitative-Q3TT73O7.js.map → qualitative-DL4WJG3O.js.map} +0 -0
  896. /package/dist/{radar2-LSD3VPZT.js.map → radar2-YNOQWHBT.js.map} +0 -0
  897. /package/dist/{radarFacility2-LZGIXY7A.js.map → radarFacility2-24UPSI7S.js.map} +0 -0
  898. /package/dist/{regression-J3XDAPAZ.js.map → regression-URAUTLTD.js.map} +0 -0
  899. /package/dist/{regression.inputs-BBZYI5OI.js.map → regression.inputs-UDVOU7FB.js.map} +0 -0
  900. /package/dist/{regression.inputs.term-7BW6XGLG.js.map → regression.inputs.term-BWW6W34R.js.map} +0 -0
  901. /package/dist/{regression.inputs.values.table-DYX2YU4H.js.map → regression.inputs.values.table-UKGIZTXG.js.map} +0 -0
  902. /package/dist/{regression.integration.spec-WLXZYKWW.js.map → regression.integration.spec-EBHQTNA3.js.map} +0 -0
  903. /package/dist/{regression.results-K5Q2N2KW.js.map → regression.results-XTOSWIP6.js.map} +0 -0
  904. /package/dist/{regression.spec-VT7T6KBY.js.map → regression.spec-KG2I53VR.js.map} +0 -0
  905. /package/dist/{report-3D3L573D.js.map → report-KH7SNPVF.js.map} +0 -0
  906. /package/dist/{sampleScatter.spec-6IPJQLM2.js.map → sampleScatter.spec-PIXGS3LG.js.map} +0 -0
  907. /package/dist/{sampleView-5JMFI4HF.js.map → sampleView-TWS6VT55.js.map} +0 -0
  908. /package/dist/{samplelst-SUCB5WOZ.js.map → samplelst-6AB5Y4WR.js.map} +0 -0
  909. /package/dist/{samplematrix-A5SZBKO6.js.map → samplematrix-AJAF555E.js.map} +0 -0
  910. /package/dist/{sc-NAA6ESO6.js.map → sc-PMNYZKXA.js.map} +0 -0
  911. /package/dist/{scatter-EQCN2HYE.js.map → scatter-Q2GH3ZJD.js.map} +0 -0
  912. /package/dist/{scatter.integration.spec-7NXIYS67.js.map → scatter.integration.spec-SMMYKWH3.js.map} +0 -0
  913. /package/dist/{selectGenomeWithTklst-KXODNCY6.js.map → selectGenomeWithTklst-VE4SDYY7.js.map} +0 -0
  914. /package/dist/{singleCellCellType-HMIW76YB.js.map → singleCellCellType-S324GCKW.js.map} +0 -0
  915. /package/dist/{singleCellCellType.unit.spec-ZCZET56X.js.map → singleCellCellType.unit.spec-NXC2GELH.js.map} +0 -0
  916. /package/dist/{singleCellGeneExpression-IUCUHF6R.js.map → singleCellGeneExpression-6H4HRKIA.js.map} +0 -0
  917. /package/dist/{singleCellGeneExpression.unit.spec-J4D6F2N3.js.map → singleCellGeneExpression.unit.spec-HIJXVUWJ.js.map} +0 -0
  918. /package/dist/{singleCellPlot-L6W3MDGG.js.map → singleCellPlot-H7PCZ2DP.js.map} +0 -0
  919. /package/dist/{singlecell-A6ECAAPI.js.map → singlecell-4LH3MQVL.js.map} +0 -0
  920. /package/dist/{singlecell-KBABNXC5.js.map → singlecell-MOSYT3RI.js.map} +0 -0
  921. /package/dist/{snp-RO7ATG6E.js.map → snp-IKLGTD4Q.js.map} +0 -0
  922. /package/dist/{snp.unit.spec-ZJLRGJD4.js.map → snp.unit.spec-GC74MUVM.js.map} +0 -0
  923. /package/dist/{snplocus-N3CU6NRP.js.map → snplocus-RIABFSBQ.js.map} +0 -0
  924. /package/dist/{spliceevent.a53ss.diagram-7PHT4COB.js.map → spliceevent.a53ss.diagram-4E2IYYHL.js.map} +0 -0
  925. /package/dist/{spliceevent.exonskip.diagram-3CZTY6QD.js.map → spliceevent.exonskip.diagram-C56R6XLQ.js.map} +0 -0
  926. /package/dist/{spliceevent.noeventdiagram-GQE256DT.js.map → spliceevent.noeventdiagram-SIPMAKXI.js.map} +0 -0
  927. /package/dist/{ssGSEA-4I3L5MX2.js.map → ssGSEA-5QNHLSOI.js.map} +0 -0
  928. /package/dist/{ssGSEA.unit.spec-PZCC5YU7.js.map → ssGSEA.unit.spec-KVPN553B.js.map} +0 -0
  929. /package/dist/{summarizeCnvGeneexp-ASXUQW56.js.map → summarizeCnvGeneexp-K4VGJSW6.js.map} +0 -0
  930. /package/dist/{summarizeGeneexpSurvival-ULGUOW5V.js.map → summarizeGeneexpSurvival-HGHX65FN.js.map} +0 -0
  931. /package/dist/{summarizeMutationCnv-VDUCIUGM.js.map → summarizeMutationCnv-3K4Z6R2X.js.map} +0 -0
  932. /package/dist/{summarizeMutationDiagnosis-FMAAMCZC.js.map → summarizeMutationDiagnosis-M2MHUPRT.js.map} +0 -0
  933. /package/dist/{summarizeMutationSurvival-GZ4NGDJT.js.map → summarizeMutationSurvival-WVBUP3GA.js.map} +0 -0
  934. /package/dist/{summary-2WNZ6JSB.js.map → summary-RZHZXCU5.js.map} +0 -0
  935. /package/dist/{summary.integration.spec-XPMYB6GM.js.map → summary.integration.spec-FGZP7DY7.js.map} +0 -0
  936. /package/dist/{summaryInput-2UGXEA5C.js.map → summaryInput-UGM7MMCR.js.map} +0 -0
  937. /package/dist/{sunburst-76WCQLTT.js.map → sunburst-L27U7LV7.js.map} +0 -0
  938. /package/dist/{survival-3EAMPHSX.js.map → survival-5ZMEBV6O.js.map} +0 -0
  939. /package/dist/{survival-23IZM4ML.js.map → survival-JWRRGTJT.js.map} +0 -0
  940. /package/dist/{survival.integration.spec-YNVAKBV3.js.map → survival.integration.spec-Z5542I4V.js.map} +0 -0
  941. /package/dist/{svgraph-G2M5LXEP.js.map → svgraph-O6ZVLNNN.js.map} +0 -0
  942. /package/dist/{svmr-BUDBVU34.js.map → svmr-ULFV7OSH.js.map} +0 -0
  943. /package/dist/{table-QJSZ6YFK.js.map → table-CHRQH2GH.js.map} +0 -0
  944. /package/dist/{termCollection-2YAY3RLZ.js.map → termCollection-FAO6ZA6F.js.map} +0 -0
  945. /package/dist/{termCollection-MAMDMEDD.js.map → termCollection-GBXS3GOY.js.map} +0 -0
  946. /package/dist/{termCollection.unit.spec-UY7G2BHG.js.map → termCollection.unit.spec-4WRTOV6E.js.map} +0 -0
  947. /package/dist/{tk-GFGP3F76.js.map → tk-KNUBWRNK.js.map} +0 -0
  948. /package/dist/{tp.ui-OQ757UIE.js.map → tp.ui-2PPYOQYL.js.map} +0 -0
  949. /package/dist/{tvs.density-BJK23JYJ.js.map → tvs.density-BZ5SKDQS.js.map} +0 -0
  950. /package/dist/{tvs.dt-TOYEFKNT.js.map → tvs.dt-TDNSTGQR.js.map} +0 -0
  951. /package/dist/{tvs.dtcnv.categorical-EO2VLFL2.js.map → tvs.dtcnv.categorical-P2IGIE4I.js.map} +0 -0
  952. /package/dist/{tvs.dtcnv.continuous-ZAHTKZ4Y.js.map → tvs.dtcnv.continuous-2XUCRBDR.js.map} +0 -0
  953. /package/dist/{tvs.dtfusion-BY3AHBL3.js.map → tvs.dtfusion-PRHZVMOG.js.map} +0 -0
  954. /package/dist/{tvs.dtsnvindel-UM5LQ4FR.js.map → tvs.dtsnvindel-KGKBW5JS.js.map} +0 -0
  955. /package/dist/{tvs.dtsv-H7ZVHLS5.js.map → tvs.dtsv-M3CY5TZF.js.map} +0 -0
  956. /package/dist/{tvs.numeric-66FP6RRH.js.map → tvs.numeric-W74JCC5P.js.map} +0 -0
  957. /package/dist/{tvs.samplelst-Q5ECTZOY.js.map → tvs.samplelst-BTWFBBAN.js.map} +0 -0
  958. /package/dist/{tvs.termCollection-FYNMKZTR.js.map → tvs.termCollection-Y64QIKOA.js.map} +0 -0
  959. /package/dist/{violin-EGWLAJVM.js.map → violin-3LLHHV3L.js.map} +0 -0
  960. /package/dist/{violin.integration.spec-3P4TYHBR.js.map → violin.integration.spec-6NF5FDLQ.js.map} +0 -0
  961. /package/dist/{violin.interactivity-VWDR4LYB.js.map → violin.interactivity-W2AKZ24D.js.map} +0 -0
  962. /package/dist/{violin.renderer-WWTU6J7X.js.map → violin.renderer-CRFYYZRI.js.map} +0 -0
  963. /package/dist/{vocabulary-JG4ZITOH.js.map → vocabulary-AUJOAVYS.js.map} +0 -0
@@ -1,514 +0,0 @@
1
- import {
2
- colorDelta,
3
- getInterpolatedDomainRange,
4
- removeOutliers
5
- } from "./chunk-LN3QYBGI.js";
6
- import {
7
- copyMerge
8
- } from "./chunk-MVTCBVSX.js";
9
- import {
10
- dtcnv
11
- } from "./chunk-AMYSEKPF.js";
12
- import {
13
- Blues_default,
14
- Reds_default
15
- } from "./chunk-KSGA62R2.js";
16
- import {
17
- axisBottom,
18
- axisLeft,
19
- axisRight,
20
- axisTop
21
- } from "./chunk-LOZEKOES.js";
22
- import {
23
- linear
24
- } from "./chunk-OAWQ6LOO.js";
25
- import {
26
- roundValueAuto
27
- } from "./chunk-L4QG7XZE.js";
28
- import {
29
- __export
30
- } from "./chunk-HFNDKYVF.js";
31
-
32
- // plots/matrix/matrix.layout.js
33
- var matrix_layout_exports = {};
34
- __export(matrix_layout_exports, {
35
- getMaxGrpLabelWidth: () => getMaxGrpLabelWidth,
36
- setAutoDimensions: () => setAutoDimensions,
37
- setLabelsAndScales: () => setLabelsAndScales,
38
- setLayout: () => setLayout
39
- });
40
- var MINCOLWSPACED = 7;
41
- function setAutoDimensions(xOffset) {
42
- const m = this.state.config.settings.matrix;
43
- if (!this.autoDimensions) this.autoDimensions = /* @__PURE__ */ new Set();
44
- if (!m.colw) this.autoDimensions.add("colw");
45
- else this.autoDimensions.delete("colw");
46
- if (!m.rowh) this.autoDimensions.add("rowh");
47
- else this.autoDimensions.delete("rowh");
48
- const s = this.settings.matrix;
49
- this.computedSettings = {
50
- useCanvas: this.sampleOrder.length > m.svgCanvasSwitch
51
- };
52
- if (s.availContentWidth) {
53
- this.availContentWidth = s.availContentWidth;
54
- } else {
55
- let boundingWidth = this.dom.contentNode.getBoundingClientRect().width;
56
- if (boundingWidth < 600) {
57
- boundingWidth = window.document.body.clientWidth;
58
- }
59
- const maxGrpLabelWidth = this.getMaxGrpLabelWidth();
60
- const padding = Math.max(65, maxGrpLabelWidth);
61
- const hcw = this.state.config.settings.hierCluster?.xDendrogramHeight || 0;
62
- this.availContentWidth = boundingWidth - padding - s.margin.right - xOffset - hcw;
63
- }
64
- let colwSpaced, colwNoSpace;
65
- if (this.autoDimensions.has("colw")) {
66
- const totalColgspace = s.colgspace * Math.max(0, this.visibleSampleGrps.size - 1);
67
- const tentativeGaps = this.sampleOrder.length * s.colspace + totalColgspace;
68
- const spacedColw = (this.availContentWidth - tentativeGaps) / this.sampleOrder.length;
69
- const constrainedMINCOLWSPACED = Math.max(s.colwMin, Math.min(MINCOLWSPACED, s.colwMax));
70
- colwSpaced = Math.max(constrainedMINCOLWSPACED, Math.min(spacedColw, s.colwMax));
71
- const noSpacedColw = (this.availContentWidth - totalColgspace) / this.sampleOrder.length;
72
- colwNoSpace = Math.max(s.colwMin, Math.min(noSpacedColw, s.colwMax));
73
- this.computedSettings.colw = colwSpaced <= MINCOLWSPACED ? colwNoSpace : colwSpaced;
74
- this.computedSettings.zoomMin = s.colwMin / this.computedSettings.colw;
75
- this.computedSettings.zoomMax = s.colwMax / this.computedSettings.colw;
76
- } else {
77
- colwSpaced = m.colw;
78
- colNoSpace = m.colw;
79
- this.computedSettings.colw = m.colw;
80
- this.computedSettings.zoomMin = s.colwMin / m.colw;
81
- this.computedSettings.zoomMax = s.colwMax / m.colw;
82
- }
83
- const { colw } = this.computedSettings;
84
- this.computedSettings.colspace = colw === colwNoSpace && colwSpaced < colwNoSpace || colw * s.zoomLevel < MINCOLWSPACED ? 0 : s.colspace;
85
- const hch = this.state.config.settings.hierCluster?.yDendrogramHeight || 0;
86
- const availHeight = s.availContentHeight || screen.availHeight - hch;
87
- this.computedSettings.clusterRowh = Math.min(
88
- s.rowhMax,
89
- Math.max(s.rowhMin, Math.floor(availHeight / this.numClusterTerms))
90
- );
91
- copyMerge(this.settings.matrix, this.computedSettings);
92
- }
93
- function getMaxGrpLabelWidth() {
94
- const s = this.settings.matrix;
95
- const g = this.dom.svg.append("g").attr("opacity", 0.01);
96
- let maxWidth = 0;
97
- for (const grp of this.termGroups) {
98
- const grpLabel = !grp.name ? "" : grp.name.length <= s.termGrpLabelMaxChars ? grp.name : grp.name.slice(0, s.termGrpLabelMaxChars) + "\u2026";
99
- const text = g.append("text").text(grpLabel).attr("font-size", 12);
100
- const box = text.node().getBBox();
101
- if (maxWidth < box.width) maxWidth = box.width;
102
- }
103
- g.remove();
104
- return maxWidth;
105
- }
106
- function setLabelsAndScales() {
107
- const s = this.settings.matrix;
108
- this.cnvValues = [];
109
- const ht = s.transpose ? s.colw : s.rowh;
110
- const grpTotals = {};
111
- const processedLabels = { sampleGrpByName: {}, termGrpByName: {} };
112
- let totalHtAdjustments = 0;
113
- for (const t of this.termOrder) {
114
- const countedSamples = /* @__PURE__ */ new Set();
115
- t.counts = { samples: 0, hits: 0 };
116
- const renderedContinuousVs = [];
117
- let hasMixedValues = false;
118
- if (t.tw.term.type == "termCollection") {
119
- t.counts.minval = 0;
120
- t.counts.maxval = 0;
121
- }
122
- t.counts.subGroupCounts = {};
123
- for (const group of this.sampleGroups) {
124
- t.counts.subGroupCounts[group.name] = {
125
- samplesTotal: 0,
126
- // number of counted (not Blank or WT) samples
127
- classes: {}
128
- // number of each class
129
- };
130
- if (t.tw.term.type == "geneVariant") {
131
- t.counts.subGroupCounts[group.name].samplesNotTested = 0;
132
- }
133
- }
134
- if (!processedLabels.termGrpByName[t.grp.name || ""]) {
135
- const name = t.grp.name || "";
136
- t.grp.label = name.length <= s.termGrpLabelMaxChars ? name : name.slice(0, s.termGrpLabelMaxChars) + "\u2026";
137
- processedLabels.termGrpByName[name] = t.grp.label;
138
- }
139
- for (const sample of this.sampleOrder) {
140
- if (countedSamples.has(sample.row.sample)) continue;
141
- const name = sample.grp.name || "";
142
- if (!(name in processedLabels.sampleGrpByName)) {
143
- sample.grp.label = name.length <= s.sampleGrpLabelMaxChars ? name : name.slice(0, s.sampleGrpLabelMaxChars) + "\u2026";
144
- if (this.config.divideBy) sample.grp.label += ` (${sample.grp.lst.length})`;
145
- processedLabels.sampleGrpByName[name] = sample.grp.label;
146
- }
147
- const sampleName = sample.row._ref_.label || "";
148
- sample.label = sampleName.length <= s.collabelmaxchars ? sampleName : sampleName.slice(0, s.collabelmaxchars) + "\u2026";
149
- const anno = sample.row[t.tw.$id];
150
- if (!anno) continue;
151
- if (t.tw.term.type == "termCollection" && anno.hasMixedValues) {
152
- hasMixedValues = true;
153
- }
154
- if (t.tw.term.type == "termCollection" && anno.values) {
155
- for (const val of anno.values) {
156
- const pct = val.value;
157
- if (pct > 0) {
158
- const cumSum = val.pre_val_sum + pct;
159
- if (!("maxval" in t.counts) || t.counts.maxval < cumSum) {
160
- t.counts.maxval = cumSum;
161
- }
162
- } else if (pct < 0) {
163
- const cumSum = val.pre_val_sum + pct;
164
- if (!("minval" in t.counts) || t.counts.minval > cumSum) {
165
- t.counts.minval = cumSum;
166
- }
167
- }
168
- }
169
- }
170
- const { filteredValues, countedValues, renderedValues } = this.classifyValues(
171
- anno,
172
- t.tw,
173
- t.grp,
174
- this.settings.matrix,
175
- sample.row
176
- );
177
- anno.filteredValues = filteredValues;
178
- anno.countedValues = countedValues;
179
- anno.renderedValues = renderedValues;
180
- if (anno.countedValues?.length) {
181
- t.counts.samples += 1;
182
- t.counts.hits += anno.countedValues.length;
183
- if (t.tw.q?.mode == "continuous") {
184
- const v = anno.value;
185
- if (!t.tw.term.values?.[v]?.uncomputable) {
186
- if (!("minval" in t.counts) || t.counts.minval > v) t.counts.minval = v;
187
- if (!("maxval" in t.counts) || t.counts.maxval < v) t.counts.maxval = v;
188
- }
189
- }
190
- if (t.tw.term.type == "geneVariant" && anno.values) {
191
- for (const val of anno.values) {
192
- if (val.dt == dtcnv && "value" in val && !s.ignoreCnvValues) {
193
- const v = val.value;
194
- this.cnvValues.push(v);
195
- }
196
- }
197
- }
198
- }
199
- if (t.tw.q?.mode == "continuous" && renderedValues?.length && t.grp.type != "hierCluster") {
200
- renderedContinuousVs.push(
201
- t.tw.term.valueConversion ? t.tw.term.valueConversion.scaleFactor * (renderedValues[0].value || renderedValues[0]) : renderedValues[0].value || renderedValues[0]
202
- );
203
- }
204
- const subGroup = t.counts.subGroupCounts?.[sample.grp.name];
205
- const countedValuesNoSkip = anno.filteredValues.filter((v) => {
206
- if (t.tw.term.type == "geneVariant") {
207
- if (v.class == "WT" || v.class == "Blank") return false;
208
- }
209
- return true;
210
- });
211
- if (countedValuesNoSkip.length) {
212
- if (t.tw.term.type == "geneVariant") {
213
- let sampleCounted = false;
214
- for (const countedValue of countedValuesNoSkip) {
215
- if (s.geneVariantCountSamplesSkipMclass.includes(countedValue.class)) {
216
- if (!subGroup.notTestedClasses) subGroup.notTestedClasses = {};
217
- if (!(countedValue.class in subGroup.notTestedClasses)) subGroup.notTestedClasses[countedValue.class] = 1;
218
- else subGroup.notTestedClasses[countedValue.class] += 1;
219
- } else if (!(countedValue.class in subGroup.classes)) {
220
- if (!sampleCounted) {
221
- subGroup.samplesTotal += 1;
222
- sampleCounted = true;
223
- }
224
- subGroup.classes[countedValue.class] = 1;
225
- } else {
226
- if (!sampleCounted) {
227
- subGroup.samplesTotal += 1;
228
- sampleCounted = true;
229
- }
230
- subGroup.classes[countedValue.class] += 1;
231
- }
232
- }
233
- } else {
234
- subGroup.samplesTotal += 1;
235
- for (const countedValue of countedValuesNoSkip) {
236
- if (!(countedValue in subGroup.classes)) subGroup.classes[countedValue] = 1;
237
- else subGroup.classes[countedValue] += 1;
238
- }
239
- }
240
- }
241
- if (anno.filteredValues?.length && t.tw.term.type == "geneVariant") {
242
- const notTested = anno.filteredValues.every((v) => v.class == "Blank");
243
- if (notTested) {
244
- subGroup.samplesNotTested += 1;
245
- }
246
- }
247
- }
248
- if (t.tw.label) {
249
- t.label = t.tw.label;
250
- } else if (t.grp.type == "hierCluster") {
251
- t.label = t.tw.term.gene || t.tw.term.name;
252
- } else {
253
- t.label = t.tw.term.name;
254
- }
255
- if (t.label.length > s.rowlabelmaxchars) t.label = t.label.slice(0, s.rowlabelmaxchars - 1) + "\u2026";
256
- const termGroupName = this.config?.settings.hierCluster?.termGroupName;
257
- if (s.samplecount4gene && t.tw.term.type.startsWith("gene") && (!termGroupName || t.grp.name !== termGroupName)) {
258
- const count = s.samplecount4gene === "abs" ? t.counts.samples : (100 * t.counts.samples / this.sampleOrder.length).toFixed(1) + "%";
259
- t.label = `${t.label} (${count})`;
260
- }
261
- const twSpecificSettings = this.config.settings.matrix.twSpecificSettings;
262
- if (!twSpecificSettings[t.tw.$id]) twSpecificSettings[t.tw.$id] = {};
263
- const twSettings = twSpecificSettings[t.tw.$id];
264
- if (t.grp.type !== "hierCluster" && t.tw.q?.mode == "continuous") {
265
- const vc = t.tw.term.valueConversion;
266
- if (vc) {
267
- t.counts.minval *= vc.scaleFactor;
268
- t.counts.maxval *= vc.scaleFactor;
269
- }
270
- if (renderedContinuousVs.length && t.tw.q.convert2ZScore) {
271
- const mean = renderedContinuousVs.reduce((acc, val) => acc + val, 0) / renderedContinuousVs.length;
272
- const std = Math.sqrt(
273
- renderedContinuousVs.reduce((acc, val) => acc + Math.pow(val - mean, 2), 0) / renderedContinuousVs.length
274
- );
275
- t.mean = mean;
276
- t.std = std;
277
- t.counts.minval = (t.counts.minval - mean) / std;
278
- t.counts.maxval = (t.counts.maxval - mean) / std;
279
- }
280
- if (!twSettings.contBarH) twSettings.contBarH = t.tw.term.type == "termCollection" ? 150 : s.barh;
281
- if (!("gap" in twSettings)) twSettings.contBarGap = 4;
282
- const barh = twSettings.contBarH;
283
- if (t.tw.term.type == "termCollection") {
284
- if (!("minval" in t.counts)) t.counts.minval = 0;
285
- if (!("maxval" in t.counts)) t.counts.maxval = 0;
286
- }
287
- const absMin = Math.abs(t.counts.minval);
288
- const rangeSpansZero = t.counts.minval < 0 && t.counts.maxval > 0;
289
- const ratio = t.counts.minval >= 0 ? 1 : t.counts.maxval / (absMin + t.counts.maxval);
290
- t.counts.posMaxHt = ratio * barh;
291
- const tickValues = [t.counts.maxval, t.counts.minval];
292
- t.scales = {
293
- tickValues,
294
- full: linear().domain(tickValues).range([1, barh])
295
- };
296
- if (t.counts.maxval >= 0) {
297
- const domainMin = rangeSpansZero ? 0 : t.counts.minval;
298
- t.scales.pos = linear().domain([domainMin, t.counts.maxval]).range([1, t.counts.posMaxHt]);
299
- }
300
- if (t.counts.minval < 0) {
301
- const domainMax = rangeSpansZero ? 0 : t.counts.maxval;
302
- t.scales.neg = linear().domain([domainMax, t.counts.minval]).range([1, barh - t.counts.posMaxHt]);
303
- }
304
- }
305
- t.totalHtAdjustments = totalHtAdjustments;
306
- t.rowHt = t.grp.type == "hierCluster" ? s.clusterRowh : twSettings.contBarH && t.tw.q?.mode == "continuous" ? twSettings.contBarH + 2 * twSettings.contBarGap : ht;
307
- const adjustment = t.rowHt - ht - (t.grp.type == "hierCluster" ? s.rowspace : 0);
308
- totalHtAdjustments += adjustment;
309
- t.cumulativeAdjustment = totalHtAdjustments;
310
- if (!(t.visibleGrpIndex in grpTotals)) grpTotals[t.visibleGrpIndex] = { htAdjustment: 0 };
311
- grpTotals[t.visibleGrpIndex].htAdjustment += adjustment;
312
- t.grpTotals = grpTotals[t.visibleGrpIndex];
313
- }
314
- let cnvLegendDomainRange;
315
- if (this.cnvValues.length) {
316
- if (s.cnvValues.cutoffMode == "fixed") {
317
- this.cnvValues = this.cnvValues.filter((v) => v >= s.cnvValues.min && v <= s.cnvValues.max).sort((a, b) => a - b);
318
- if (this.cnvValues[0] != s.cnvValues.min) this.cnvValues.unshift(s.cnvValues.min);
319
- if (this.cnvValues[this.cnvValues.length - 1] != s.cnvValues.max) this.cnvValues.push(s.cnvValues.max);
320
- } else if (s.cnvValues.cutoffMode == "percentile" || s.cnvValues.cutoffMode == "auto") {
321
- let maxPercentile = s.cnvValues.cutoffMode == "auto" ? s.cnvValues.defaultPercentile : s.cnvValues.percentile;
322
- maxPercentile = maxPercentile / 100;
323
- const minPercentile = roundValueAuto(1 - maxPercentile);
324
- this.cnvValues = removeOutliers(this.cnvValues, { minPercentile, maxPercentile, baseValue: 0 });
325
- } else throw new Error(`Invalid cnvValues cutoffMode: ${s.cnvValues.cutoffMode}`);
326
- const minLoss = this.cnvValues[0] <= 0 ? this.cnvValues[0] : void 0;
327
- const maxGain = this.cnvValues[this.cnvValues.length - 1] >= 0 ? this.cnvValues[this.cnvValues.length - 1] : void 0;
328
- let maxLoss, minGain, absMax;
329
- for (const n of this.cnvValues) {
330
- if (n < 0) maxLoss = n;
331
- if (!minGain && n > 0) {
332
- minGain = n;
333
- break;
334
- }
335
- }
336
- for (const t of this.termOrder) {
337
- if (t.tw.term.type == "geneVariant") {
338
- if (!cnvLegendDomainRange) {
339
- const loss0color = Blues_default(0);
340
- const gain0color = Reds_default(0);
341
- const colorDiff = colorDelta(loss0color, gain0color);
342
- if (minLoss !== void 0 && maxGain !== void 0 && colorDiff > 25)
343
- console.warn(
344
- `CNV loss and gain do not have the same middle color for value=0'${loss0color}' vs '${gain0color}', color difference=${colorDiff}`
345
- );
346
- absMax = minLoss !== void 0 && maxGain !== void 0 ? Math.max(Math.abs(minLoss), maxGain) : minLoss !== void 0 ? Math.abs(minLoss) : maxGain;
347
- cnvLegendDomainRange = getInterpolatedDomainRange({
348
- absMin: 0,
349
- absMax,
350
- totalNumSteps: 10,
351
- negInterpolator: minLoss !== void 0 && Blues_default,
352
- posInterpolator: maxGain !== void 0 && Reds_default,
353
- // force this middleColor to white, knowing that interpolateBlues and interpolateReds,
354
- // as hardcoded above and below, share similar white colors for their minimum abs values
355
- middleColor: "white"
356
- });
357
- }
358
- t.scales = {
359
- loss: Blues_default,
360
- gain: Reds_default,
361
- maxLoss,
362
- maxGain,
363
- minLoss,
364
- minGain,
365
- absMax,
366
- legend: cnvLegendDomainRange
367
- };
368
- }
369
- }
370
- }
371
- }
372
- function setLayout() {
373
- const s = this.settings.matrix;
374
- const [col, row] = !s.transpose ? ["sample", "term"] : ["term", "sample"];
375
- const [_t_, _b_] = s.collabelpos == "top" ? ["", "Grp"] : ["Grp", ""];
376
- const [_l_, _r_] = s.rowlabelpos == "left" ? ["", "Grp"] : ["Grp", ""];
377
- const top = col + _t_;
378
- const btm = col + _b_;
379
- const left = row + _l_;
380
- const right = row + _r_;
381
- this.samples = this.sampleOrder;
382
- this.sampleGrps = this.sampleOrder.filter((s2) => s2.index === 0);
383
- this.terms = this.termOrder;
384
- this.termGrps = this.termOrder.filter((t) => t.index === 0);
385
- const layout = {};
386
- const sides = { top, btm, left, right };
387
- for (const direction in sides) {
388
- const d = sides[direction];
389
- const Direction = direction[0].toUpperCase() + direction.slice(1);
390
- layout[direction] = {
391
- prefix: d,
392
- data: this[`${d}s`],
393
- offset: s[`${d}LabelOffset`],
394
- box: this.dom[`${d}LabelG`],
395
- key: this[`${d}Key`],
396
- label: this[`${d}Label`],
397
- render: this[`render${Direction}Label`],
398
- isGroup: sides[direction].includes("Grp")
399
- };
400
- }
401
- const yOffset = layout.top.offset + s.margin.top + s.scrollHeight;
402
- const xOffset = layout.left.offset + s.margin.left;
403
- this.setAutoDimensions(xOffset);
404
- this.setLabelsAndScales();
405
- const colw = Math.max(s.colwMin, Math.min(s.colwMax, s.colw * s.zoomLevel));
406
- const dx = colw + s.colspace;
407
- const nx = this[`${col}s`].length;
408
- const dy = s.rowh + s.rowspace;
409
- const ny = this[`${row}s`].length;
410
- const mainwByColDimensions = nx * (colw + s.colspace) + this[`${col}Grps`].length * s.colgspace + (this[`${col}s`].slice(-1)[0]?.totalHtAdjustments || 0);
411
- const mainw = Math.min(mainwByColDimensions, this.availContentWidth);
412
- const lastRow = this[`${row}s`].slice(-1)[0];
413
- const mainh = ny * dy + (this[`${row}Grps`].length - 1) * s.rowgspace + (lastRow?.cumulativeAdjustment || 0);
414
- const colLabelFontSize = Math.min(
415
- Math.max(colw + s.colspace - 2 * s.collabelpad - s.colspace, s.minLabelFontSize),
416
- s.maxLabelFontSize
417
- );
418
- const topFontSize = _t_ == "Grp" ? s.grpLabelFontSize : colLabelFontSize;
419
- layout.top.attr = {
420
- boxTransform: `translate(${xOffset}, ${yOffset - s.collabelgap})`,
421
- adjustBoxTransform: (dx2) => layout.top.box.attr("transform", `translate(${xOffset + dx2}, ${yOffset - s.collabelgap})`),
422
- labelTransform: "rotate(-90)",
423
- labelAnchor: "start",
424
- labelGY: 0,
425
- labelGTransform: this[`col${_t_}LabelGTransform`],
426
- fontSize: topFontSize,
427
- textpos: { coord: "y", factor: -1 },
428
- axisFxn: axisTop
429
- };
430
- if (layout.top.prefix == "sample")
431
- layout.top.display = s.sampleLabelsToggle !== "hide" && colw >= s.minLabelFontSize ? "" : "none";
432
- const btmFontSize = _b_ == "Grp" ? s.grpLabelFontSize : colLabelFontSize;
433
- layout.btm.attr = {
434
- boxTransform: `translate(${xOffset}, ${yOffset + mainh + s.collabelgap})`,
435
- adjustBoxTransform: (dx2) => layout.btm.box.attr("transform", `translate(${xOffset + dx2}, ${yOffset + mainh + s.collabelgap})`),
436
- labelTransform: "rotate(-90)",
437
- labelAnchor: "end",
438
- labelGY: 0,
439
- labelGTransform: this[`col${_b_}LabelGTransform`],
440
- fontSize: btmFontSize,
441
- textpos: { coord: "y", factor: 1 },
442
- axisFxn: axisBottom
443
- };
444
- if (layout.btm.prefix == "sample")
445
- layout.btm.display = s.sampleLabelsToggle !== "hide" && colw >= s.minLabelFontSize ? "" : "none";
446
- const leftFontSize = _l_ == "Grp" ? s.grpLabelFontSize : Math.max(s.rowh + s.rowspace - 2 * s.rowlabelpad - s.rowspace, s.minLabelFontSize);
447
- layout.left.attr = {
448
- boxTransform: `translate(${xOffset - s.rowlabelgap}, ${yOffset})`,
449
- labelTransform: "",
450
- labelAnchor: "end",
451
- labelGX: 0,
452
- labelGTransform: this[`row${_l_}LabelGTransform`],
453
- fontSize: leftFontSize,
454
- textpos: { coord: "x", factor: -1 },
455
- axisFxn: axisLeft
456
- };
457
- const rtFontSize = _r_ == "Grp" ? s.grpLabelFontSize : Math.max(s.rowh + s.rowspace - 2 * s.rowlabelpad, s.minLabelFontSize);
458
- layout.right.attr = {
459
- boxTransform: `translate(${xOffset + mainw + s.rowlabelgap}, ${yOffset})`,
460
- labelTransform: "",
461
- labelAnchor: "start",
462
- labelGX: 0,
463
- labelGTransform: this[`row${_r_}LabelGTransform`],
464
- fontSize: rtFontSize,
465
- textpos: { coord: "x", factor: 1 },
466
- axisFxn: axisRight
467
- };
468
- this.dom.sampleLabelsPG.attr("clip-path", s.transpose ? "" : `url(#${this.seriesClipId})`);
469
- this.dom.termLabelsPG.attr("clip-path", s.transpose ? `url(#${this.seriesClipId})` : "");
470
- this.layout = layout;
471
- if (!s.zoomCenterPct) {
472
- s.zoomCenterPct = 0.5;
473
- s.zoomIndex = Math.round(s.zoomCenterPct * mainw / dx);
474
- s.zoomGrpIndex = this.sampleOrder[s.zoomIndex]?.grpIndex || 0;
475
- }
476
- const zoomCenter = s.zoomCenterPct * mainw;
477
- const centerCellX = s.zoomIndex * dx + s.zoomGrpIndex * s.colgspace;
478
- const zoomedMainW = Math.max(0, nx * dx + (this[`${col}Grps`].length - 1) * s.colgspace);
479
- const seriesXoffset = s.zoomLevel <= 1 && mainw >= zoomedMainW ? 0 : Math.max(zoomCenter - centerCellX, mainw - zoomedMainW);
480
- const imgW = (s.imgWMax > zoomedMainW ? zoomedMainW : s.imgWMax) - 1e-7;
481
- const halfImgW = 0.5 * imgW;
482
- const unwantedRightOvershoot = Math.max(0, centerCellX + halfImgW - zoomedMainW);
483
- const imgLeftMin = Math.max(0, centerCellX - Math.min(halfImgW, imgW) - unwantedRightOvershoot);
484
- const xMin = s.zoomLevel <= 1 && mainw >= zoomedMainW ? 0 : imgLeftMin;
485
- const xMax = imgW + xMin;
486
- this.dimensions = {
487
- xMin,
488
- xMax,
489
- dx,
490
- dy,
491
- xOffset,
492
- yOffset,
493
- mainw,
494
- mainh,
495
- colw,
496
- zoomedMainW,
497
- seriesXoffset: seriesXoffset > 0 ? 0 : seriesXoffset,
498
- maxMainW: Math.max(mainwByColDimensions, this.availContentWidth),
499
- imgW,
500
- // recompute the resolvable "pixel width", in case the pixel ratio changes
501
- // when moving the browser window to a different monitor,
502
- // will be used to sharpen canvas shapes that are smaller than this pixel width
503
- pxw: 1 / window.devicePixelRatio
504
- };
505
- }
506
-
507
- export {
508
- setAutoDimensions,
509
- getMaxGrpLabelWidth,
510
- setLabelsAndScales,
511
- setLayout,
512
- matrix_layout_exports
513
- };
514
- //# sourceMappingURL=chunk-LTSR7SLO.js.map