@sjcrh/proteinpaint-client 2.181.0 → 2.182.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/2dmaf-YHYYSSKR.js +1371 -0
- package/dist/AIProjectAdmin-D4AASQBM.js +830 -0
- package/dist/AIProjectAdmin-D4AASQBM.js.map +7 -0
- package/dist/AppHeader-T4ZLY3VG.js +833 -0
- package/dist/BoxPlot-DIU4YXNK.js +1217 -0
- package/dist/BoxPlot-DIU4YXNK.js.map +7 -0
- package/dist/CorrelationVolcano-EXH4P56S.js +617 -0
- package/dist/DE-C5K2TVUQ.js +93 -0
- package/dist/DE-C5K2TVUQ.js.map +7 -0
- package/dist/DEinput-KVILE7QQ.js +297 -0
- package/dist/DEinput-KVILE7QQ.js.map +7 -0
- package/dist/DifferentialAnalysis-P6GKHAS5.js +238 -0
- package/dist/Disco-IMLXEBPG.js +3235 -0
- package/dist/Disco-IMLXEBPG.js.map +7 -0
- package/dist/Disco.UI-4A2P5Q55.js +242 -0
- package/dist/DmrPlot-6EEEGD32.js +640 -0
- package/dist/GB-XFO5I6ND.js +1125 -0
- package/dist/HicApp-3LFHOOAR.js +2248 -0
- package/dist/NumBinaryEditor-74PY52BP.js +268 -0
- package/dist/NumBinaryEditor-74PY52BP.js.map +7 -0
- package/dist/NumBinaryEditor.unit.spec-2PYZ7P2R.js +284 -0
- package/dist/NumContEditor-BMWALLQM.js +105 -0
- package/dist/NumContEditor.unit.spec-ETVLVX6A.js +167 -0
- package/dist/NumCustomBinEditor-2XJ6GUWY.js +36 -0
- package/dist/NumCustomBinEditor.unit.spec-TZVL553E.js +282 -0
- package/dist/NumDiscreteEditor-4LNLKAXT.js +177 -0
- package/dist/NumDiscreteEditor-4LNLKAXT.js.map +7 -0
- package/dist/NumDiscreteEditor.unit.spec-KQND2XAE.js +200 -0
- package/dist/NumRegularBinEditor-OYELFDIB.js +36 -0
- package/dist/NumRegularBinEditor.unit.spec-44SALKLH.js +225 -0
- package/dist/NumSplineEditor-SENQC4P2.js +190 -0
- package/dist/NumSplineEditor-SENQC4P2.js.map +7 -0
- package/dist/NumSplineEditor.unit.spec-XKB4XXU4.js +197 -0
- package/dist/NumericDensity-GCNWO7YS.js +36 -0
- package/dist/NumericDensity.unit.spec-7LWNOUYK.js +219 -0
- package/dist/NumericHandler-EMQBI5UI.js +37 -0
- package/dist/NumericHandler.unit.spec-TEELPRIM.js +217 -0
- package/dist/RunChart2-LJBC5X2H.js +756 -0
- package/dist/RunChart2-LJBC5X2H.js.map +7 -0
- package/dist/SC-3EB6UYIS.js +682 -0
- package/dist/SC-3EB6UYIS.js.map +7 -0
- package/dist/Volcano-CPULLVYV.js +1185 -0
- package/dist/Volcano-CPULLVYV.js.map +7 -0
- package/dist/WSIViewer-2YCT4LCM.js +47974 -0
- package/dist/WSIViewer-2YCT4LCM.js.map +7 -0
- package/dist/WsiSamplesPlot-B2DM7Z3Q.js +163 -0
- package/dist/adSandbox-INF3NNEV.js +36 -0
- package/dist/alphaGenome-CO4TQHXN.js +173 -0
- package/dist/app-63JU2YIT.js +47 -0
- package/dist/app-BL3POUOO.js +35 -0
- package/dist/app.js +17 -17
- package/dist/bam-SVEJYICC.js +857 -0
- package/dist/bam-SVEJYICC.js.map +7 -0
- package/dist/barchart-PDUXZAIH.js +45 -0
- package/dist/barchart.data-EXENRVMU.js +22 -0
- package/dist/barchart.events-MQNQTSWI.js +45 -0
- package/dist/barchart.integration.spec-DSO2377T.js +1675 -0
- package/dist/bars.renderer-S7A7I6BQ.js +12 -0
- package/dist/block-OO2NLGUP.js +6200 -0
- package/dist/block-OO2NLGUP.js.map +7 -0
- package/dist/block.init-7J5OHYKA.js +36 -0
- package/dist/block.mds.expressionrank-643H7PN7.js +357 -0
- package/dist/block.mds.geneboxplot-C222ODSL.js +826 -0
- package/dist/block.mds.junction-C5DJRUOK.js +1543 -0
- package/dist/block.mds.svcnv-4G74JQ7Y.js +6799 -0
- package/dist/block.svg-35KUC5R7.js +162 -0
- package/dist/block.tk.aicheck-LLWT6K6H.js +281 -0
- package/dist/block.tk.ase-PQUKY65E.js +363 -0
- package/dist/block.tk.bam-EUEOB7BR.js +1904 -0
- package/dist/block.tk.bedgraphdot-XAHUY545.js +382 -0
- package/dist/block.tk.bigwig.ui-HEOPNL3T.js +209 -0
- package/dist/block.tk.hicstraw-EPH3LEX2.js +821 -0
- package/dist/block.tk.junction-MIUDAIAR.js +2362 -0
- package/dist/block.tk.junction.textmatrixui-AVFUQBDS.js +197 -0
- package/dist/block.tk.ld-ED7YMBQ4.js +97 -0
- package/dist/block.tk.menu-3CVIECWQ.js +1027 -0
- package/dist/block.tk.pgv-HETJVWXH.js +942 -0
- package/dist/brainImaging-K3LHK3DD.js +421 -0
- package/dist/chat-BYX5ARUK.js +148 -0
- package/dist/chunk-25RP5OSE.js +1426 -0
- package/dist/chunk-25RP5OSE.js.map +7 -0
- package/dist/chunk-2LULD7RN.js +31 -0
- package/dist/chunk-2M6JV7YS.js +261 -0
- package/dist/chunk-2M6JV7YS.js.map +7 -0
- package/dist/chunk-2TJESM3Z.js +158 -0
- package/dist/chunk-2TJESM3Z.js.map +7 -0
- package/dist/chunk-2VFYZ3EY.js +102 -0
- package/dist/chunk-3CD5ZROA.js +4952 -0
- package/dist/chunk-3DCABJHB.js +381 -0
- package/dist/chunk-3MMKHYUM.js +95 -0
- package/dist/chunk-3PRPMJTG.js +55 -0
- package/dist/chunk-4JON7TLI.js +176 -0
- package/dist/chunk-4JON7TLI.js.map +7 -0
- package/dist/chunk-5JD4D5GD.js +215 -0
- package/dist/chunk-5JD4D5GD.js.map +7 -0
- package/dist/chunk-5UMPBVA6.js +534 -0
- package/dist/chunk-64FGLSIM.js +56 -0
- package/dist/chunk-64FGLSIM.js.map +7 -0
- package/dist/chunk-6ITDJ5UR.js +261 -0
- package/dist/chunk-6ITDJ5UR.js.map +7 -0
- package/dist/chunk-6LAE5AVA.js +13624 -0
- package/dist/chunk-6VLA5NEW.js +335 -0
- package/dist/chunk-6VLA5NEW.js.map +7 -0
- package/dist/chunk-7FKIAQ4K.js +17 -0
- package/dist/chunk-7FKIAQ4K.js.map +7 -0
- package/dist/chunk-7FTDQDVF.js +824 -0
- package/dist/chunk-7IEZ2KMW.js +142 -0
- package/dist/chunk-7RN3L2BX.js +1788 -0
- package/dist/chunk-7RN3L2BX.js.map +7 -0
- package/dist/chunk-A5AFIW2T.js +14 -0
- package/dist/chunk-A6TQGNDQ.js +421 -0
- package/dist/chunk-A6TQGNDQ.js.map +7 -0
- package/dist/chunk-AIBODF32.js +2784 -0
- package/dist/chunk-AWWW6K2I.js +407 -0
- package/dist/chunk-AWWW6K2I.js.map +7 -0
- package/dist/chunk-BAY47D5E.js +226 -0
- package/dist/chunk-CFHKYLDY.js +26 -0
- package/dist/chunk-CJZN7HFL.js +293 -0
- package/dist/chunk-CXOF4UGH.js +229 -0
- package/dist/chunk-CXOF4UGH.js.map +7 -0
- package/dist/chunk-D4QFQQWJ.js +170 -0
- package/dist/chunk-DNCSPTOQ.js +446 -0
- package/dist/chunk-DQGSCCI3.js +100 -0
- package/dist/chunk-EWGMLVC7.js +34 -0
- package/dist/chunk-F7PB5HGT.js +148 -0
- package/dist/chunk-G7QKLA54.js +92 -0
- package/dist/chunk-HWHG63LH.js +148 -0
- package/dist/chunk-HWHG63LH.js.map +7 -0
- package/dist/chunk-HYZG6OPC.js +467 -0
- package/dist/chunk-HYZG6OPC.js.map +7 -0
- package/dist/chunk-IBBMKCO7.js +526 -0
- package/dist/chunk-IBBMKCO7.js.map +7 -0
- package/dist/chunk-IQUYTZOA.js +455 -0
- package/dist/chunk-IQUYTZOA.js.map +7 -0
- package/dist/chunk-J5RINDKS.js +480 -0
- package/dist/chunk-JMPSZMDD.js +52 -0
- package/dist/chunk-KQMEJUWI.js +815 -0
- package/dist/chunk-KWFEGPZL.js +97 -0
- package/dist/chunk-KWFEGPZL.js.map +7 -0
- package/dist/chunk-LBXZGYU5.js +368 -0
- package/dist/chunk-LBXZGYU5.js.map +7 -0
- package/dist/chunk-LRBNYEFI.js +50 -0
- package/dist/chunk-LRBNYEFI.js.map +7 -0
- package/dist/chunk-LRMV5DNW.js +441 -0
- package/dist/chunk-LWNOC7AJ.js +54 -0
- package/dist/chunk-MICNOSX7.js +129 -0
- package/dist/chunk-MLWNMXAV.js +272 -0
- package/dist/chunk-MMBLSLQR.js +158 -0
- package/dist/chunk-N3QEGDEZ.js +117 -0
- package/dist/chunk-N3QEGDEZ.js.map +7 -0
- package/dist/chunk-NV5XWADG.js +1150 -0
- package/dist/chunk-NVB7MQLH.js +20649 -0
- package/dist/chunk-NVB7MQLH.js.map +7 -0
- package/dist/chunk-O3255WPP.js +1087 -0
- package/dist/chunk-OSM7YS23.js +276 -0
- package/dist/chunk-PEWHCKCH.js +1205 -0
- package/dist/chunk-PEWHCKCH.js.map +7 -0
- package/dist/chunk-Q7PYFSNU.js +107 -0
- package/dist/chunk-QEZPKEWB.js +1159 -0
- package/dist/chunk-QEZPKEWB.js.map +7 -0
- package/dist/chunk-QMI222IJ.js +386 -0
- package/dist/chunk-QRIRWDIW.js +252 -0
- package/dist/chunk-SJTOSA7E.js +629 -0
- package/dist/chunk-SRYFYAXK.js +615 -0
- package/dist/chunk-SSPDNHDW.js +398 -0
- package/dist/chunk-SSPDNHDW.js.map +7 -0
- package/dist/chunk-SYMOQE3X.js +37 -0
- package/dist/chunk-SYMOQE3X.js.map +7 -0
- package/dist/chunk-TITA4HJA.js +228 -0
- package/dist/chunk-U7ZMIMI5.js +2815 -0
- package/dist/chunk-UJU3Q7QJ.js +119 -0
- package/dist/chunk-UL2ISTHR.js +2672 -0
- package/dist/chunk-VIPMLSZP.js +217 -0
- package/dist/chunk-VYIO7T6J.js +82 -0
- package/dist/chunk-VYIO7T6J.js.map +7 -0
- package/dist/chunk-VZPYIG77.js +1271 -0
- package/dist/chunk-VZPYIG77.js.map +7 -0
- package/dist/chunk-W345H42C.js +273 -0
- package/dist/chunk-W345H42C.js.map +7 -0
- package/dist/chunk-WGL6FIUE.js +330 -0
- package/dist/chunk-WIYKAKWE.js +302 -0
- package/dist/chunk-WJGVQJSX.js +514 -0
- package/dist/chunk-WJGVQJSX.js.map +7 -0
- package/dist/chunk-WPHOEG56.js +194 -0
- package/dist/chunk-WU63AOK2.js +4207 -0
- package/dist/chunk-WU63AOK2.js.map +7 -0
- package/dist/chunk-XS4QWRS3.js +205 -0
- package/dist/chunk-XYFDBYOY.js +1658 -0
- package/dist/chunk-XYFDBYOY.js.map +7 -0
- package/dist/chunk-YDWRIMCT.js +289 -0
- package/dist/chunk-YDWRIMCT.js.map +7 -0
- package/dist/chunk-YK5NFMHR.js +269 -0
- package/dist/chunk-YK5NFMHR.js.map +7 -0
- package/dist/chunk-YSW57QDM.js +6364 -0
- package/dist/chunk-YXQNZPCO.js +203 -0
- package/dist/chunk-YYYJB53A.js +2370 -0
- package/dist/chunk-ZTKQLABY.js +470 -0
- package/dist/condition-AM523RDR.js +330 -0
- package/dist/controls-HTMH5QBP.js +39 -0
- package/dist/controls.config-EEK2RBPI.js +37 -0
- package/dist/correlation-HKD67SPS.js +96 -0
- package/dist/cuminc-66V55MMN.js +1147 -0
- package/dist/cuminc.integration.spec-PNTOPB2L.js +676 -0
- package/dist/customdata.inputui-Z4WQDU6I.js +285 -0
- package/dist/dataDownload-3ZEI22OK.js +328 -0
- package/dist/dataDownload.integration.spec-C3JRC6K5.js +191 -0
- package/dist/databrowser.ui-Q365SHBG.js +419 -0
- package/dist/dictionary-D4E2VEJT.js +109 -0
- package/dist/dictionary-D4E2VEJT.js.map +7 -0
- package/dist/dnaMethylation-IFZWWBUG.js +36 -0
- package/dist/dnaMethylation.integration.spec-UKV4BSIO.js +165 -0
- package/dist/dnaMethylation.integration.spec-UKV4BSIO.js.map +7 -0
- package/dist/e2pca-I3QXF7EM.js +348 -0
- package/dist/ep-2VCQ36GT.js +1254 -0
- package/dist/expclust.gdc.spec-VWIQFY67.js +305 -0
- package/dist/facet-CHP3VUWS.js +519 -0
- package/dist/geneExpClustering-YDIDEH2O.js +246 -0
- package/dist/geneExpression-FA5RJRHZ.js +36 -0
- package/dist/geneExpression-X2KXJPND.js +312 -0
- package/dist/geneExpression.unit.spec-3LVHYZGG.js +100 -0
- package/dist/geneORA-4CAYRKSN.js +276 -0
- package/dist/geneVariant-OCOTNUH4.js +39 -0
- package/dist/geneVariant-Y4L5W5HF.js +37 -0
- package/dist/geneVariant.integration.spec-BOJ5MM5K.js +196 -0
- package/dist/genefusion.ui-I6HZOBIV.js +249 -0
- package/dist/geneset-GEWKDAAT.js +194 -0
- package/dist/genomeBrowser.spec-FDEGH4DY.js +279 -0
- package/dist/grin2-K56B6XBZ.js +1031 -0
- package/dist/grin2-V6FMM44N.js +1554 -0
- package/dist/gsea-UNPPRU2U.js +45 -0
- package/dist/hierCluster-DXAWRQNI.js +58 -0
- package/dist/hierCluster-SPIQA2M2.js +62 -0
- package/dist/hierCluster.config-JW6D3T3Q.js +38 -0
- package/dist/hierCluster.integration.spec-5NXZY4LG.js +374 -0
- package/dist/hierCluster.interactivity-CPPBXHM7.js +52 -0
- package/dist/hierCluster.renderers-A6MEGO2B.js +21 -0
- package/dist/imagePlot-QLAHCULW.js +139 -0
- package/dist/importPlot-6ITZ6U7G.js +8 -0
- package/dist/isoformExpression-7GAUF2QV.js +38 -0
- package/dist/isoformExpression.unit.spec-3BVXVVNO.js +206 -0
- package/dist/isoformExpression.unit.spec-3BVXVVNO.js.map +7 -0
- package/dist/jspdf.es.min-FC3BCETM.js +40 -0
- package/dist/launch.adhoc-HFHBAUR6.js +40 -0
- package/dist/leftlabel.sample-CWPJUCHR.js +257 -0
- package/dist/lollipop-QFRQLEER.js +166 -0
- package/dist/maf-OEODBT3Y.js +450 -0
- package/dist/maf-OEODBT3Y.js.map +7 -0
- package/dist/maftimeline-2DFIF4C4.js +591 -0
- package/dist/matrix-3HFB5TUU.js +57 -0
- package/dist/matrix-MIXK27AD.js +62 -0
- package/dist/matrix.cells-U7AQNEBP.js +28 -0
- package/dist/matrix.config-FX5MHX6O.js +39 -0
- package/dist/matrix.controls-5K7BB5Z4.js +37 -0
- package/dist/matrix.data-EEIY6AO4.js +25 -0
- package/dist/matrix.dom-6QL3AJMW.js +11 -0
- package/dist/matrix.groups-CUB6UWC5.js +26 -0
- package/dist/matrix.integration.spec-ML4T7FRG.js +3070 -0
- package/dist/matrix.interactivity-QMPWX63Q.js +40 -0
- package/dist/matrix.layout-7SEF6MYI.js +42 -0
- package/dist/matrix.legend-42LQGAGX.js +22 -0
- package/dist/matrix.renderers-ZF7LLER3.js +36 -0
- package/dist/matrix.serieses-4B2WB526.js +21 -0
- package/dist/matrix.sort-BJACNR7G.js +27 -0
- package/dist/matrix.sort.unit.spec-ZGSM7HDJ.js +470 -0
- package/dist/matrix.sorterUi-W6XFYZY2.js +18 -0
- package/dist/matrix.sorterUi.unit.spec-V34ZZD7A.js +340 -0
- package/dist/mavb-NVQVFU6E.js +730 -0
- package/dist/mds.fimo-HOCF6U6K.js +516 -0
- package/dist/mds.samplescatterplot-ULD5BK5R.js +1548 -0
- package/dist/mds.survivalplot-5US32RQD.js +481 -0
- package/dist/oncomatrix-Y3G3MUJJ.js +293 -0
- package/dist/oncomatrix-Y3G3MUJJ.js.map +7 -0
- package/dist/oncomatrix.spec-MFUJLWEP.js +446 -0
- package/dist/plot.2dvaf-F4WZ4YPU.js +375 -0
- package/dist/plot.app-YFFLLBU5.js +39 -0
- package/dist/plot.barplot-2EJ2MWQD.js +100 -0
- package/dist/plot.boxplot-AKZM443E.js +150 -0
- package/dist/plot.brainImaging-DR6WJNFZ.js +51 -0
- package/dist/plot.disco-LBE5H67U.js +101 -0
- package/dist/plot.disco-LBE5H67U.js.map +7 -0
- package/dist/plot.dzi-R2MR7HAT.js +33 -0
- package/dist/plot.ssgq-C52YIUFY.js +137 -0
- package/dist/plot.vaf2cov-FOD3K7BC.js +257 -0
- package/dist/plot.wsi-D2TXYERK.js +36 -0
- package/dist/polar-2LC35O6K.js +184 -0
- package/dist/polar2-QPUOEUJZ.js +226 -0
- package/dist/profile.spec-3NCDGHLX.js +78 -0
- package/dist/profileBarchart-PPQ3NL4D.js +265 -0
- package/dist/profileForms-GS3VVW65.js +438 -0
- package/dist/profilePlot-DQWFH5NC.js +52 -0
- package/dist/profileRadar-KAKRDC4R.js +261 -0
- package/dist/profileRadarFacility-FZP62VPV.js +261 -0
- package/dist/profileRadarFacility-FZP62VPV.js.map +7 -0
- package/dist/proteinView-LWVWJY54.js +444 -0
- package/dist/proteinView-LWVWJY54.js.map +7 -0
- package/dist/proteomeAbundance-DE4NVBCN.js +21 -0
- package/dist/proteomeAbundance-LTB3QR3G.js +63 -0
- package/dist/qualitative-YOFAROVR.js +41 -0
- package/dist/regression-PF6IAHJK.js +54 -0
- package/dist/regression.inputs-77IUYED3.js +46 -0
- package/dist/regression.inputs.term-WWCHU6KF.js +46 -0
- package/dist/regression.inputs.values.table-I6GM6MU7.js +43 -0
- package/dist/regression.integration.spec-DGEZUURU.js +782 -0
- package/dist/regression.integration.spec-DGEZUURU.js.map +7 -0
- package/dist/regression.results-6GXNKYUS.js +38 -0
- package/dist/regression.spec-MEFQNY34.js +706 -0
- package/dist/report-LG3UKZHL.js +220 -0
- package/dist/sampleScatter.spec-D3IK7MSA.js +200 -0
- package/dist/sampleView-XUI2J5EC.js +46 -0
- package/dist/samplelst-A7IHCBAX.js +109 -0
- package/dist/samplematrix-VGUU7Q75.js +2196 -0
- package/dist/sc-UVKVT2RY.js +84 -0
- package/dist/scatter-UILUYOGO.js +800 -0
- package/dist/scatter.integration.spec-VPNALPUG.js +1194 -0
- package/dist/scatter.integration.spec-VPNALPUG.js.map +7 -0
- package/dist/selectGenomeWithTklst-LWKIMZEJ.js +132 -0
- package/dist/singleCellCellType-TI52WQQ4.js +36 -0
- package/dist/singleCellCellType.unit.spec-R3BTRFRU.js +158 -0
- package/dist/singleCellCellType.unit.spec-R3BTRFRU.js.map +7 -0
- package/dist/singleCellGeneExpression-I5SAHMGI.js +36 -0
- package/dist/singleCellGeneExpression.unit.spec-2JTB5HLY.js +151 -0
- package/dist/singleCellGeneExpression.unit.spec-2JTB5HLY.js.map +7 -0
- package/dist/singleCellPlot-HRWCHYCI.js +51 -0
- package/dist/singlecell-BHPP7KCO.js +1570 -0
- package/dist/singlecell-PQNKBKR7.js +84 -0
- package/dist/snp-V4YGI7B3.js +36 -0
- package/dist/snp.unit.spec-JSUCMGNP.js +174 -0
- package/dist/snplocus-3YT5NNCH.js +206 -0
- package/dist/spliceevent.a53ss.diagram-QEQJ44YH.js +149 -0
- package/dist/spliceevent.exonskip.diagram-HMWVSOJG.js +275 -0
- package/dist/spliceevent.noeventdiagram-L5HUCT5A.js +458 -0
- package/dist/ssGSEA-Z3XRCBYW.js +36 -0
- package/dist/ssGSEA.unit.spec-EUCTV2XJ.js +86 -0
- package/dist/summarizeCnvGeneexp-O7O2CFW4.js +161 -0
- package/dist/summarizeCnvGeneexp-O7O2CFW4.js.map +7 -0
- package/dist/summarizeGeneexpSurvival-DDPH56EI.js +106 -0
- package/dist/summarizeGeneexpSurvival-DDPH56EI.js.map +7 -0
- package/dist/summarizeMutationCnv-6KJQUJWR.js +162 -0
- package/dist/summarizeMutationCnv-6KJQUJWR.js.map +7 -0
- package/dist/summarizeMutationDiagnosis-HFFYLQOF.js +38 -0
- package/dist/summarizeMutationSurvival-OBK6YILP.js +97 -0
- package/dist/summary-W55WWIU2.js +47 -0
- package/dist/summary.integration.spec-X2PNAUKW.js +412 -0
- package/dist/summaryInput-X547Q6C7.js +218 -0
- package/dist/sunburst-KWNGYBRI.js +282 -0
- package/dist/sunburst-KWNGYBRI.js.map +7 -0
- package/dist/survival-PAJZHZPD.js +56 -0
- package/dist/survival-TQPWMOD5.js +44 -0
- package/dist/survival.integration.spec-YMQASOMX.js +800 -0
- package/dist/survival.integration.spec-YMQASOMX.js.map +7 -0
- package/dist/svg2pdf.es.min-CYTPRWNB.js +3157 -0
- package/dist/svgraph-Y35C2M3D.js +1385 -0
- package/dist/svmr-WGCIR7PE.js +3840 -0
- package/dist/table-Q3B2YXEN.js +198 -0
- package/dist/termCollection-A6YTSM5I.js +177 -0
- package/dist/termCollection-NTFNVQ7D.js +36 -0
- package/dist/termCollection.unit.spec-BX54PHKT.js +206 -0
- package/dist/tk-OCBZ7YR6.js +44 -0
- package/dist/tp.ui-ZT47N2CO.js +1457 -0
- package/dist/tvs.dt-BFB253O3.js +37 -0
- package/dist/tvs.dtcnv.categorical-ARGAYIDO.js +38 -0
- package/dist/tvs.dtcnv.continuous-JCU23ERV.js +70 -0
- package/dist/tvs.dtfusion-FV64XLZI.js +38 -0
- package/dist/tvs.dtsnvindel-DMOXMEVL.js +38 -0
- package/dist/tvs.dtsv-53FSZEPV.js +38 -0
- package/dist/tvs.samplelst-MVPL6VXX.js +102 -0
- package/dist/tvs.termCollection-UGJXTHTG.js +151 -0
- package/dist/violin-ZLUDGSQG.js +44 -0
- package/dist/violin.integration.spec-KWOFOFLT.js +1423 -0
- package/dist/violin.integration.spec-KWOFOFLT.js.map +7 -0
- package/dist/violin.interactivity-ULDOCZWW.js +36 -0
- package/dist/violin.renderer-KJAXPMIK.js +38 -0
- package/dist/vocabulary-34YUQ4ZQ.js +39 -0
- package/package.json +3 -3
- package/dist/2dmaf-PFPBHIUI.js +0 -1371
- package/dist/AIProjectAdmin-H2GB5ZOX.js +0 -830
- package/dist/AIProjectAdmin-H2GB5ZOX.js.map +0 -7
- package/dist/AppHeader-FCWML6WH.js +0 -833
- package/dist/BoxPlot-QKXGF76K.js +0 -1295
- package/dist/BoxPlot-QKXGF76K.js.map +0 -7
- package/dist/CorrelationVolcano-ZJ7Q6JBC.js +0 -617
- package/dist/DifferentialAnalysis-PWCFCWFY.js +0 -238
- package/dist/Disco-IE5JKIF2.js +0 -3199
- package/dist/Disco-IE5JKIF2.js.map +0 -7
- package/dist/Disco.UI-SR7LSJE3.js +0 -242
- package/dist/DmrPlot-UDY7GOSY.js +0 -640
- package/dist/GB-GNTOP5C6.js +0 -1125
- package/dist/HicApp-FZTJL3OA.js +0 -2248
- package/dist/NumBinaryEditor-R5QVG3C4.js +0 -266
- package/dist/NumBinaryEditor-R5QVG3C4.js.map +0 -7
- package/dist/NumBinaryEditor.unit.spec-BMVRI24W.js +0 -284
- package/dist/NumContEditor-6JT5D6IW.js +0 -105
- package/dist/NumContEditor.unit.spec-XBQF2SW6.js +0 -167
- package/dist/NumCustomBinEditor-MEKEFOQI.js +0 -36
- package/dist/NumCustomBinEditor.unit.spec-LEMQJHDT.js +0 -282
- package/dist/NumDiscreteEditor-U3N37XRQ.js +0 -170
- package/dist/NumDiscreteEditor-U3N37XRQ.js.map +0 -7
- package/dist/NumDiscreteEditor.unit.spec-WQM4DLKO.js +0 -200
- package/dist/NumRegularBinEditor-HQR5Y6P7.js +0 -36
- package/dist/NumRegularBinEditor.unit.spec-FL4IFT7L.js +0 -225
- package/dist/NumSplineEditor-OESWMWP5.js +0 -188
- package/dist/NumSplineEditor-OESWMWP5.js.map +0 -7
- package/dist/NumSplineEditor.unit.spec-HYOXO45B.js +0 -197
- package/dist/NumericDensity-GJZ4BBJS.js +0 -36
- package/dist/NumericDensity.unit.spec-6LXWAXW7.js +0 -219
- package/dist/NumericHandler-LZIMPOHS.js +0 -37
- package/dist/NumericHandler.unit.spec-ZSU35AMD.js +0 -217
- package/dist/RunChart2-7XV6TIFO.js +0 -756
- package/dist/RunChart2-7XV6TIFO.js.map +0 -7
- package/dist/SC-E4EYAG26.js +0 -733
- package/dist/SC-E4EYAG26.js.map +0 -7
- package/dist/Volcano-Z7TJK6PW.js +0 -1187
- package/dist/Volcano-Z7TJK6PW.js.map +0 -7
- package/dist/WSIViewer-ZH2XABLC.js +0 -47933
- package/dist/WSIViewer-ZH2XABLC.js.map +0 -7
- package/dist/WsiSamplesPlot-BL47MDHQ.js +0 -163
- package/dist/adSandbox-V3NTKVBC.js +0 -36
- package/dist/alphaGenome-IQVFCSWQ.js +0 -173
- package/dist/app-GJLZ2G2U.js +0 -47
- package/dist/app-YSD2U64Q.js +0 -35
- package/dist/bam-TRIF3AIQ.js +0 -849
- package/dist/bam-TRIF3AIQ.js.map +0 -7
- package/dist/barchart-GLLUYTAJ.js +0 -45
- package/dist/barchart.data-FRYRGKH3.js +0 -22
- package/dist/barchart.events-WODVSHRN.js +0 -45
- package/dist/barchart.integration.spec-6POS3V3T.js +0 -1675
- package/dist/bars.renderer-T5R3UIBW.js +0 -12
- package/dist/block-2QM37YSE.js +0 -6300
- package/dist/block-2QM37YSE.js.map +0 -7
- package/dist/block.init-7HDLKQVX.js +0 -36
- package/dist/block.mds.expressionrank-UIB25S6E.js +0 -357
- package/dist/block.mds.geneboxplot-4PQYO3MR.js +0 -826
- package/dist/block.mds.junction-DWFYZEC2.js +0 -1543
- package/dist/block.mds.svcnv-N3KJJ4GQ.js +0 -6799
- package/dist/block.svg-2HBDI7BT.js +0 -162
- package/dist/block.tk.aicheck-2M4522IQ.js +0 -281
- package/dist/block.tk.ase-URIKF6JD.js +0 -363
- package/dist/block.tk.bam-HTDMASHX.js +0 -1904
- package/dist/block.tk.bedgraphdot-RVKMSFCQ.js +0 -382
- package/dist/block.tk.bigwig.ui-7JPEOIKM.js +0 -209
- package/dist/block.tk.hicstraw-72J7UJ2J.js +0 -821
- package/dist/block.tk.junction-GGFMBCV5.js +0 -2362
- package/dist/block.tk.junction.textmatrixui-44SAYYWE.js +0 -197
- package/dist/block.tk.ld-XDKJFEOL.js +0 -97
- package/dist/block.tk.menu-46FOTM7H.js +0 -1027
- package/dist/block.tk.pgv-ZVONRT4B.js +0 -942
- package/dist/brainImaging-CSLO7ODJ.js +0 -421
- package/dist/chat-GMD22F3K.js +0 -148
- package/dist/chunk-22KWZOCN.js +0 -153
- package/dist/chunk-22KWZOCN.js.map +0 -7
- package/dist/chunk-2NQ4TM74.js +0 -48
- package/dist/chunk-2NQ4TM74.js.map +0 -7
- package/dist/chunk-2SRMRC6L.js +0 -421
- package/dist/chunk-2SRMRC6L.js.map +0 -7
- package/dist/chunk-2TIYJ3PH.js +0 -815
- package/dist/chunk-2UWHV2SB.js +0 -261
- package/dist/chunk-2UWHV2SB.js.map +0 -7
- package/dist/chunk-3656ZY4T.js +0 -237
- package/dist/chunk-3656ZY4T.js.map +0 -7
- package/dist/chunk-3TU6TRLQ.js +0 -98
- package/dist/chunk-3TU6TRLQ.js.map +0 -7
- package/dist/chunk-4FJ5GS6P.js +0 -4202
- package/dist/chunk-4FJ5GS6P.js.map +0 -7
- package/dist/chunk-4FO7KZY2.js +0 -534
- package/dist/chunk-4OEOQX4L.js +0 -334
- package/dist/chunk-4OEOQX4L.js.map +0 -7
- package/dist/chunk-5ZICCKEH.js +0 -4952
- package/dist/chunk-6UU7VPDO.js +0 -272
- package/dist/chunk-6YLQN7FF.js +0 -441
- package/dist/chunk-74QJDBIP.js +0 -480
- package/dist/chunk-75EBDB7G.js +0 -21
- package/dist/chunk-75EBDB7G.js.map +0 -7
- package/dist/chunk-7FXPMQRW.js +0 -34
- package/dist/chunk-A2Y3GEUH.js +0 -228
- package/dist/chunk-AAEXTQT3.js +0 -330
- package/dist/chunk-AG6HVFQY.js +0 -504
- package/dist/chunk-AG6HVFQY.js.map +0 -7
- package/dist/chunk-AHLUW2BN.js +0 -129
- package/dist/chunk-AYDXOUFX.js +0 -1275
- package/dist/chunk-AYDXOUFX.js.map +0 -7
- package/dist/chunk-BBIPZ2UF.js +0 -52
- package/dist/chunk-BBVOZ5BY.js +0 -230
- package/dist/chunk-BBVOZ5BY.js.map +0 -7
- package/dist/chunk-BHVDOW3W.js +0 -470
- package/dist/chunk-BNN32RI2.js +0 -36
- package/dist/chunk-BNN32RI2.js.map +0 -7
- package/dist/chunk-BQLC6QOH.js +0 -368
- package/dist/chunk-BQLC6QOH.js.map +0 -7
- package/dist/chunk-C5QOWZK6.js +0 -629
- package/dist/chunk-CJJ6LDZM.js +0 -170
- package/dist/chunk-CJJ6LDZM.js.map +0 -7
- package/dist/chunk-D4U5X2QQ.js +0 -261
- package/dist/chunk-D4U5X2QQ.js.map +0 -7
- package/dist/chunk-DV444SFD.js +0 -26
- package/dist/chunk-DWWAB4YQ.js +0 -102
- package/dist/chunk-FP5VKE3Z.js +0 -170
- package/dist/chunk-G2MAZI6I.js +0 -205
- package/dist/chunk-HLRNIO5K.js +0 -158
- package/dist/chunk-HTHH2B6D.js +0 -46
- package/dist/chunk-HTHH2B6D.js.map +0 -7
- package/dist/chunk-I7X6K4OL.js +0 -217
- package/dist/chunk-IC7SUXJD.js +0 -82
- package/dist/chunk-IC7SUXJD.js.map +0 -7
- package/dist/chunk-ITYEOGLB.js +0 -302
- package/dist/chunk-J6XKDYNZ.js +0 -276
- package/dist/chunk-JDX4E7ZO.js +0 -381
- package/dist/chunk-JWX7GYHP.js +0 -95
- package/dist/chunk-KISFQDQE.js +0 -258
- package/dist/chunk-KISFQDQE.js.map +0 -7
- package/dist/chunk-KLFROH3F.js +0 -203
- package/dist/chunk-KQSN7PUK.js +0 -215
- package/dist/chunk-KQSN7PUK.js.map +0 -7
- package/dist/chunk-L2ED35QZ.js +0 -2815
- package/dist/chunk-LLPFFNLV.js +0 -526
- package/dist/chunk-LLPFFNLV.js.map +0 -7
- package/dist/chunk-LRV4VWRF.js +0 -94
- package/dist/chunk-LRV4VWRF.js.map +0 -7
- package/dist/chunk-M464GTNI.js +0 -615
- package/dist/chunk-MDN3K2BG.js +0 -229
- package/dist/chunk-MDN3K2BG.js.map +0 -7
- package/dist/chunk-N46WTUX7.js +0 -286
- package/dist/chunk-N46WTUX7.js.map +0 -7
- package/dist/chunk-NBMJ2UMA.js +0 -194
- package/dist/chunk-NI7VSKJI.js +0 -293
- package/dist/chunk-NTVM4ZPG.js +0 -2784
- package/dist/chunk-O64UTRAC.js +0 -252
- package/dist/chunk-OM326NV3.js +0 -100
- package/dist/chunk-P4ENJUBN.js +0 -386
- package/dist/chunk-PEKVBCIH.js +0 -824
- package/dist/chunk-PF6MKI4X.js +0 -92
- package/dist/chunk-PJTQP6RL.js +0 -54
- package/dist/chunk-PVSRVJBE.js +0 -1201
- package/dist/chunk-PVSRVJBE.js.map +0 -7
- package/dist/chunk-PZ3L3KM6.js +0 -55
- package/dist/chunk-QEHUEG4X.js +0 -1788
- package/dist/chunk-QEHUEG4X.js.map +0 -7
- package/dist/chunk-QXCVG66S.js +0 -2672
- package/dist/chunk-RIGZHHCP.js +0 -119
- package/dist/chunk-SEIANPCX.js +0 -142
- package/dist/chunk-SK7YVOQN.js +0 -148
- package/dist/chunk-SPPZB5ZQ.js +0 -158
- package/dist/chunk-SPPZB5ZQ.js.map +0 -7
- package/dist/chunk-T5KFRIP4.js +0 -1087
- package/dist/chunk-TTSNECVD.js +0 -1413
- package/dist/chunk-TTSNECVD.js.map +0 -7
- package/dist/chunk-TVXESYIR.js +0 -439
- package/dist/chunk-TVXESYIR.js.map +0 -7
- package/dist/chunk-U3UR3U3F.js +0 -446
- package/dist/chunk-UBS5UVIY.js +0 -13624
- package/dist/chunk-UFYU7AKL.js +0 -107
- package/dist/chunk-VIYGTRUZ.js +0 -6364
- package/dist/chunk-WCTH7CB3.js +0 -31
- package/dist/chunk-WGSWVYHY.js +0 -1155
- package/dist/chunk-WGSWVYHY.js.map +0 -7
- package/dist/chunk-WYZ4COTF.js +0 -226
- package/dist/chunk-WZRXJ5LL.js +0 -2370
- package/dist/chunk-XDI4UFCZ.js +0 -467
- package/dist/chunk-XDI4UFCZ.js.map +0 -7
- package/dist/chunk-XZZLEHWC.js +0 -20328
- package/dist/chunk-XZZLEHWC.js.map +0 -7
- package/dist/chunk-Y7JAPSMG.js +0 -406
- package/dist/chunk-Y7JAPSMG.js.map +0 -7
- package/dist/chunk-YJ2HC4CP.js +0 -1150
- package/dist/chunk-ZLH4PJKX.js +0 -1658
- package/dist/chunk-ZLH4PJKX.js.map +0 -7
- package/dist/chunk-ZZSDYKD5.js +0 -14
- package/dist/condition-S52W57ZO.js +0 -330
- package/dist/controls-B4MTTPWO.js +0 -39
- package/dist/controls.config-6KBCTIPN.js +0 -37
- package/dist/correlation-VSBCBFFP.js +0 -96
- package/dist/cuminc-T5ZPAGVB.js +0 -1147
- package/dist/cuminc.integration.spec-2QT3IPHU.js +0 -676
- package/dist/customdata.inputui-5MHQQHJL.js +0 -285
- package/dist/dataDownload-S4EBNHMW.js +0 -328
- package/dist/dataDownload.integration.spec-OVSIWI34.js +0 -191
- package/dist/databrowser.ui-EAJS3NXV.js +0 -419
- package/dist/dictionary-CQHSMVYF.js +0 -98
- package/dist/dictionary-CQHSMVYF.js.map +0 -7
- package/dist/dnaMethylation-G3F2INDH.js +0 -36
- package/dist/dnaMethylation.integration.spec-FWF4353K.js +0 -179
- package/dist/dnaMethylation.integration.spec-FWF4353K.js.map +0 -7
- package/dist/e2pca-SLXGPVHP.js +0 -348
- package/dist/ep-4HGUSDGJ.js +0 -1254
- package/dist/expclust.gdc.spec-JJ42ESKE.js +0 -305
- package/dist/facet-6WVTVKDV.js +0 -519
- package/dist/geneExpClustering-5LOZPD5X.js +0 -246
- package/dist/geneExpression-BJ46UGXW.js +0 -312
- package/dist/geneExpression-PTSZWKCM.js +0 -36
- package/dist/geneExpression.unit.spec-NW5HTO7F.js +0 -100
- package/dist/geneORA-H65EZ7QO.js +0 -276
- package/dist/geneVariant-T6GWOVZD.js +0 -39
- package/dist/geneVariant-WTDFZTXG.js +0 -37
- package/dist/geneVariant.integration.spec-OPSBRUM3.js +0 -196
- package/dist/genefusion.ui-RSBCC37C.js +0 -249
- package/dist/geneset-B67PAZVL.js +0 -194
- package/dist/genomeBrowser.spec-AUTULF4C.js +0 -279
- package/dist/grin2-CMBP7XVH.js +0 -1031
- package/dist/grin2-JVCNH3KW.js +0 -1554
- package/dist/gsea-H774WVPQ.js +0 -45
- package/dist/hierCluster-IQTXQUMI.js +0 -58
- package/dist/hierCluster-ZQJDXYBD.js +0 -62
- package/dist/hierCluster.config-ZHJTZK5L.js +0 -38
- package/dist/hierCluster.integration.spec-MSJ5GHHK.js +0 -374
- package/dist/hierCluster.interactivity-H2GNO6AA.js +0 -52
- package/dist/hierCluster.renderers-2TE6HMK2.js +0 -21
- package/dist/imagePlot-FMNMB7JZ.js +0 -139
- package/dist/importPlot-N66G43XX.js +0 -8
- package/dist/isoformExpression-B64WLO3H.js +0 -38
- package/dist/isoformExpression.unit.spec-D2R6CRKO.js +0 -126
- package/dist/isoformExpression.unit.spec-D2R6CRKO.js.map +0 -7
- package/dist/jspdf.es.min-DO4YWL2R.js +0 -40
- package/dist/launch.adhoc-MPRAJ3GN.js +0 -40
- package/dist/leftlabel.sample-4JCKYXED.js +0 -257
- package/dist/lollipop-25ADHT7O.js +0 -166
- package/dist/maf-POYTGXT4.js +0 -442
- package/dist/maf-POYTGXT4.js.map +0 -7
- package/dist/maftimeline-FOQF6O3X.js +0 -591
- package/dist/matrix-LHLAYDTQ.js +0 -57
- package/dist/matrix-ZKF7NRAD.js +0 -62
- package/dist/matrix.cells-H4TS74FJ.js +0 -28
- package/dist/matrix.config-HE7QUDER.js +0 -39
- package/dist/matrix.controls-VILCLNSC.js +0 -37
- package/dist/matrix.data-2OUWYD35.js +0 -25
- package/dist/matrix.dom-IZFFS4RQ.js +0 -11
- package/dist/matrix.groups-5BGJIOOJ.js +0 -26
- package/dist/matrix.integration.spec-DSXZHAEY.js +0 -3070
- package/dist/matrix.interactivity-VK3NWX5M.js +0 -40
- package/dist/matrix.layout-PUNMMNCC.js +0 -42
- package/dist/matrix.legend-QMERGVYU.js +0 -22
- package/dist/matrix.renderers-2KQ2NXSQ.js +0 -36
- package/dist/matrix.serieses-24G3XPJD.js +0 -21
- package/dist/matrix.sort-HTVT4K7C.js +0 -27
- package/dist/matrix.sort.unit.spec-EUVL76NB.js +0 -470
- package/dist/matrix.sorterUi-PJPFXWOJ.js +0 -18
- package/dist/matrix.sorterUi.unit.spec-QWL5Y4DQ.js +0 -340
- package/dist/mavb-UGM5SHEF.js +0 -730
- package/dist/mds.fimo-64US7RTE.js +0 -516
- package/dist/mds.samplescatterplot-JMXLXVIE.js +0 -1548
- package/dist/mds.survivalplot-RJ5UD3IU.js +0 -481
- package/dist/oncomatrix-ZFT3DRAP.js +0 -293
- package/dist/oncomatrix-ZFT3DRAP.js.map +0 -7
- package/dist/oncomatrix.spec-4YLKDGFE.js +0 -446
- package/dist/plot.2dvaf-DYSU6BBN.js +0 -375
- package/dist/plot.app-NFBVLAXZ.js +0 -39
- package/dist/plot.barplot-DBGTDK7J.js +0 -100
- package/dist/plot.boxplot-MCKZUROP.js +0 -150
- package/dist/plot.brainImaging-BBAVUEB4.js +0 -51
- package/dist/plot.disco-VGOEQYRL.js +0 -101
- package/dist/plot.disco-VGOEQYRL.js.map +0 -7
- package/dist/plot.dzi-YQIFOTZQ.js +0 -33
- package/dist/plot.ssgq-MU3BRTMC.js +0 -137
- package/dist/plot.vaf2cov-KDHZ7JXJ.js +0 -257
- package/dist/plot.wsi-G2TUGQF7.js +0 -36
- package/dist/polar-RCCZXZIU.js +0 -184
- package/dist/polar2-COQ3WIGW.js +0 -226
- package/dist/profile.spec-A4ZASR2T.js +0 -78
- package/dist/profileBarchart-GB4RK5DF.js +0 -265
- package/dist/profileForms-O5KBHRF6.js +0 -438
- package/dist/profilePlot-COCLCP5B.js +0 -52
- package/dist/profileRadar-4EE3YDOH.js +0 -261
- package/dist/profileRadarFacility-JYTSGA5H.js +0 -261
- package/dist/profileRadarFacility-JYTSGA5H.js.map +0 -7
- package/dist/proteomeAbundance-JBVXUSD6.js +0 -19
- package/dist/proteomeAbundance-NQVU4DOW.js +0 -63
- package/dist/qualitative-QROOPDSI.js +0 -41
- package/dist/regression-7FQZ22OO.js +0 -54
- package/dist/regression.inputs-F62CES3A.js +0 -46
- package/dist/regression.inputs.term-BCGP7PX4.js +0 -46
- package/dist/regression.inputs.values.table-D3ZXZSH7.js +0 -43
- package/dist/regression.integration.spec-P2BBTT2O.js +0 -784
- package/dist/regression.integration.spec-P2BBTT2O.js.map +0 -7
- package/dist/regression.results-JX6RJQQP.js +0 -38
- package/dist/regression.spec-ROME7T33.js +0 -706
- package/dist/report-B6MM4T6B.js +0 -220
- package/dist/sampleScatter.spec-EPCMC3SR.js +0 -200
- package/dist/sampleView-77EAJ75T.js +0 -46
- package/dist/samplelst-CX4NQWA7.js +0 -109
- package/dist/samplematrix-PYQFAH64.js +0 -2196
- package/dist/sc-X6SI5VVI.js +0 -84
- package/dist/scatter-ZFFHAI4F.js +0 -800
- package/dist/scatter.integration.spec-NN43OXRN.js +0 -1194
- package/dist/scatter.integration.spec-NN43OXRN.js.map +0 -7
- package/dist/selectGenomeWithTklst-CZMVTBMD.js +0 -132
- package/dist/singleCellCellType-GOBX7JKV.js +0 -36
- package/dist/singleCellCellType.unit.spec-F344QMTQ.js +0 -177
- package/dist/singleCellCellType.unit.spec-F344QMTQ.js.map +0 -7
- package/dist/singleCellGeneExpression-BLMNMEAI.js +0 -36
- package/dist/singleCellGeneExpression.unit.spec-6ZEPUFWC.js +0 -163
- package/dist/singleCellGeneExpression.unit.spec-6ZEPUFWC.js.map +0 -7
- package/dist/singleCellPlot-HLD7PLQH.js +0 -51
- package/dist/singlecell-HL4GLGIA.js +0 -1570
- package/dist/singlecell-JQFPINRS.js +0 -84
- package/dist/snp-EAUNFDAV.js +0 -36
- package/dist/snp.unit.spec-AVLPMAWI.js +0 -174
- package/dist/snplocus-2J7OA6OL.js +0 -206
- package/dist/spliceevent.a53ss.diagram-4DU2U7NW.js +0 -149
- package/dist/spliceevent.exonskip.diagram-GG5FGXOK.js +0 -275
- package/dist/spliceevent.noeventdiagram-T6RNIMCM.js +0 -458
- package/dist/ssGSEA-XJWLRVFQ.js +0 -36
- package/dist/ssGSEA.unit.spec-MQ23ODYO.js +0 -86
- package/dist/summarizeCnvGeneexp-CJPC76RM.js +0 -158
- package/dist/summarizeCnvGeneexp-CJPC76RM.js.map +0 -7
- package/dist/summarizeGeneexpSurvival-FGCFZTVG.js +0 -105
- package/dist/summarizeGeneexpSurvival-FGCFZTVG.js.map +0 -7
- package/dist/summarizeMutationCnv-4E7R2NHQ.js +0 -159
- package/dist/summarizeMutationCnv-4E7R2NHQ.js.map +0 -7
- package/dist/summarizeMutationDiagnosis-ZVX7AZK7.js +0 -38
- package/dist/summarizeMutationSurvival-EWXD7TCT.js +0 -97
- package/dist/summary-VUYBKQOC.js +0 -47
- package/dist/summary.integration.spec-EPBV5XCT.js +0 -412
- package/dist/summaryInput-YX5IRGWM.js +0 -218
- package/dist/sunburst-HPDML45I.js +0 -282
- package/dist/sunburst-HPDML45I.js.map +0 -7
- package/dist/survival-E6SRRXBB.js +0 -44
- package/dist/survival-XOXDPXZR.js +0 -56
- package/dist/survival.integration.spec-SJBPJZGJ.js +0 -787
- package/dist/survival.integration.spec-SJBPJZGJ.js.map +0 -7
- package/dist/svg2pdf.es.min-EZ4UYRSH.js +0 -3157
- package/dist/svgraph-D23WG3UE.js +0 -1385
- package/dist/svmr-UFC4TKWV.js +0 -3840
- package/dist/table-US2K6IYZ.js +0 -198
- package/dist/termCollection-E7S57CIN.js +0 -177
- package/dist/termCollection-ZMP3VE2G.js +0 -36
- package/dist/termCollection.unit.spec-MDWK6XH3.js +0 -206
- package/dist/tk-TLQJK6R4.js +0 -44
- package/dist/tp.ui-NQEAKWUH.js +0 -1457
- package/dist/tvs.dt-U2MINIBH.js +0 -37
- package/dist/tvs.dtcnv.categorical-2OOAZJKC.js +0 -38
- package/dist/tvs.dtcnv.continuous-5ETKBJ52.js +0 -70
- package/dist/tvs.dtfusion-EB4PPR3Y.js +0 -38
- package/dist/tvs.dtsnvindel-IRQPTKQF.js +0 -38
- package/dist/tvs.dtsv-TOVXZJCR.js +0 -38
- package/dist/tvs.samplelst-4SCH543Y.js +0 -102
- package/dist/tvs.termCollection-GGN5F6HC.js +0 -151
- package/dist/violin-7D7DN74I.js +0 -44
- package/dist/violin.integration.spec-KE76AL54.js +0 -1417
- package/dist/violin.integration.spec-KE76AL54.js.map +0 -7
- package/dist/violin.interactivity-YPJ2H6SQ.js +0 -36
- package/dist/violin.renderer-UK7WSA2Z.js +0 -38
- package/dist/vocabulary-KLWZ6LRP.js +0 -39
- /package/dist/{2dmaf-PFPBHIUI.js.map → 2dmaf-YHYYSSKR.js.map} +0 -0
- /package/dist/{AppHeader-FCWML6WH.js.map → AppHeader-T4ZLY3VG.js.map} +0 -0
- /package/dist/{CorrelationVolcano-ZJ7Q6JBC.js.map → CorrelationVolcano-EXH4P56S.js.map} +0 -0
- /package/dist/{DifferentialAnalysis-PWCFCWFY.js.map → DifferentialAnalysis-P6GKHAS5.js.map} +0 -0
- /package/dist/{Disco.UI-SR7LSJE3.js.map → Disco.UI-4A2P5Q55.js.map} +0 -0
- /package/dist/{DmrPlot-UDY7GOSY.js.map → DmrPlot-6EEEGD32.js.map} +0 -0
- /package/dist/{GB-GNTOP5C6.js.map → GB-XFO5I6ND.js.map} +0 -0
- /package/dist/{HicApp-FZTJL3OA.js.map → HicApp-3LFHOOAR.js.map} +0 -0
- /package/dist/{NumBinaryEditor.unit.spec-BMVRI24W.js.map → NumBinaryEditor.unit.spec-2PYZ7P2R.js.map} +0 -0
- /package/dist/{NumContEditor-6JT5D6IW.js.map → NumContEditor-BMWALLQM.js.map} +0 -0
- /package/dist/{NumContEditor.unit.spec-XBQF2SW6.js.map → NumContEditor.unit.spec-ETVLVX6A.js.map} +0 -0
- /package/dist/{NumCustomBinEditor-MEKEFOQI.js.map → NumCustomBinEditor-2XJ6GUWY.js.map} +0 -0
- /package/dist/{NumCustomBinEditor.unit.spec-LEMQJHDT.js.map → NumCustomBinEditor.unit.spec-TZVL553E.js.map} +0 -0
- /package/dist/{NumDiscreteEditor.unit.spec-WQM4DLKO.js.map → NumDiscreteEditor.unit.spec-KQND2XAE.js.map} +0 -0
- /package/dist/{NumRegularBinEditor-HQR5Y6P7.js.map → NumRegularBinEditor-OYELFDIB.js.map} +0 -0
- /package/dist/{NumRegularBinEditor.unit.spec-FL4IFT7L.js.map → NumRegularBinEditor.unit.spec-44SALKLH.js.map} +0 -0
- /package/dist/{NumSplineEditor.unit.spec-HYOXO45B.js.map → NumSplineEditor.unit.spec-XKB4XXU4.js.map} +0 -0
- /package/dist/{NumericDensity-GJZ4BBJS.js.map → NumericDensity-GCNWO7YS.js.map} +0 -0
- /package/dist/{NumericDensity.unit.spec-6LXWAXW7.js.map → NumericDensity.unit.spec-7LWNOUYK.js.map} +0 -0
- /package/dist/{NumericHandler-LZIMPOHS.js.map → NumericHandler-EMQBI5UI.js.map} +0 -0
- /package/dist/{NumericHandler.unit.spec-ZSU35AMD.js.map → NumericHandler.unit.spec-TEELPRIM.js.map} +0 -0
- /package/dist/{WsiSamplesPlot-BL47MDHQ.js.map → WsiSamplesPlot-B2DM7Z3Q.js.map} +0 -0
- /package/dist/{adSandbox-V3NTKVBC.js.map → adSandbox-INF3NNEV.js.map} +0 -0
- /package/dist/{alphaGenome-IQVFCSWQ.js.map → alphaGenome-CO4TQHXN.js.map} +0 -0
- /package/dist/{app-GJLZ2G2U.js.map → app-63JU2YIT.js.map} +0 -0
- /package/dist/{app-YSD2U64Q.js.map → app-BL3POUOO.js.map} +0 -0
- /package/dist/{barchart-GLLUYTAJ.js.map → barchart-PDUXZAIH.js.map} +0 -0
- /package/dist/{barchart.data-FRYRGKH3.js.map → barchart.data-EXENRVMU.js.map} +0 -0
- /package/dist/{barchart.events-WODVSHRN.js.map → barchart.events-MQNQTSWI.js.map} +0 -0
- /package/dist/{barchart.integration.spec-6POS3V3T.js.map → barchart.integration.spec-DSO2377T.js.map} +0 -0
- /package/dist/{bars.renderer-T5R3UIBW.js.map → bars.renderer-S7A7I6BQ.js.map} +0 -0
- /package/dist/{block.init-7HDLKQVX.js.map → block.init-7J5OHYKA.js.map} +0 -0
- /package/dist/{block.mds.expressionrank-UIB25S6E.js.map → block.mds.expressionrank-643H7PN7.js.map} +0 -0
- /package/dist/{block.mds.geneboxplot-4PQYO3MR.js.map → block.mds.geneboxplot-C222ODSL.js.map} +0 -0
- /package/dist/{block.mds.junction-DWFYZEC2.js.map → block.mds.junction-C5DJRUOK.js.map} +0 -0
- /package/dist/{block.mds.svcnv-N3KJJ4GQ.js.map → block.mds.svcnv-4G74JQ7Y.js.map} +0 -0
- /package/dist/{block.svg-2HBDI7BT.js.map → block.svg-35KUC5R7.js.map} +0 -0
- /package/dist/{block.tk.aicheck-2M4522IQ.js.map → block.tk.aicheck-LLWT6K6H.js.map} +0 -0
- /package/dist/{block.tk.ase-URIKF6JD.js.map → block.tk.ase-PQUKY65E.js.map} +0 -0
- /package/dist/{block.tk.bam-HTDMASHX.js.map → block.tk.bam-EUEOB7BR.js.map} +0 -0
- /package/dist/{block.tk.bedgraphdot-RVKMSFCQ.js.map → block.tk.bedgraphdot-XAHUY545.js.map} +0 -0
- /package/dist/{block.tk.bigwig.ui-7JPEOIKM.js.map → block.tk.bigwig.ui-HEOPNL3T.js.map} +0 -0
- /package/dist/{block.tk.hicstraw-72J7UJ2J.js.map → block.tk.hicstraw-EPH3LEX2.js.map} +0 -0
- /package/dist/{block.tk.junction-GGFMBCV5.js.map → block.tk.junction-MIUDAIAR.js.map} +0 -0
- /package/dist/{block.tk.junction.textmatrixui-44SAYYWE.js.map → block.tk.junction.textmatrixui-AVFUQBDS.js.map} +0 -0
- /package/dist/{block.tk.ld-XDKJFEOL.js.map → block.tk.ld-ED7YMBQ4.js.map} +0 -0
- /package/dist/{block.tk.menu-46FOTM7H.js.map → block.tk.menu-3CVIECWQ.js.map} +0 -0
- /package/dist/{block.tk.pgv-ZVONRT4B.js.map → block.tk.pgv-HETJVWXH.js.map} +0 -0
- /package/dist/{brainImaging-CSLO7ODJ.js.map → brainImaging-K3LHK3DD.js.map} +0 -0
- /package/dist/{chat-GMD22F3K.js.map → chat-BYX5ARUK.js.map} +0 -0
- /package/dist/{chunk-WCTH7CB3.js.map → chunk-2LULD7RN.js.map} +0 -0
- /package/dist/{chunk-DWWAB4YQ.js.map → chunk-2VFYZ3EY.js.map} +0 -0
- /package/dist/{chunk-5ZICCKEH.js.map → chunk-3CD5ZROA.js.map} +0 -0
- /package/dist/{chunk-JDX4E7ZO.js.map → chunk-3DCABJHB.js.map} +0 -0
- /package/dist/{chunk-JWX7GYHP.js.map → chunk-3MMKHYUM.js.map} +0 -0
- /package/dist/{chunk-PZ3L3KM6.js.map → chunk-3PRPMJTG.js.map} +0 -0
- /package/dist/{chunk-4FO7KZY2.js.map → chunk-5UMPBVA6.js.map} +0 -0
- /package/dist/{chunk-UBS5UVIY.js.map → chunk-6LAE5AVA.js.map} +0 -0
- /package/dist/{chunk-PEKVBCIH.js.map → chunk-7FTDQDVF.js.map} +0 -0
- /package/dist/{chunk-SEIANPCX.js.map → chunk-7IEZ2KMW.js.map} +0 -0
- /package/dist/{chunk-ZZSDYKD5.js.map → chunk-A5AFIW2T.js.map} +0 -0
- /package/dist/{chunk-NTVM4ZPG.js.map → chunk-AIBODF32.js.map} +0 -0
- /package/dist/{chunk-WYZ4COTF.js.map → chunk-BAY47D5E.js.map} +0 -0
- /package/dist/{chunk-DV444SFD.js.map → chunk-CFHKYLDY.js.map} +0 -0
- /package/dist/{chunk-NI7VSKJI.js.map → chunk-CJZN7HFL.js.map} +0 -0
- /package/dist/{chunk-FP5VKE3Z.js.map → chunk-D4QFQQWJ.js.map} +0 -0
- /package/dist/{chunk-U3UR3U3F.js.map → chunk-DNCSPTOQ.js.map} +0 -0
- /package/dist/{chunk-OM326NV3.js.map → chunk-DQGSCCI3.js.map} +0 -0
- /package/dist/{chunk-7FXPMQRW.js.map → chunk-EWGMLVC7.js.map} +0 -0
- /package/dist/{chunk-SK7YVOQN.js.map → chunk-F7PB5HGT.js.map} +0 -0
- /package/dist/{chunk-PF6MKI4X.js.map → chunk-G7QKLA54.js.map} +0 -0
- /package/dist/{chunk-74QJDBIP.js.map → chunk-J5RINDKS.js.map} +0 -0
- /package/dist/{chunk-BBIPZ2UF.js.map → chunk-JMPSZMDD.js.map} +0 -0
- /package/dist/{chunk-2TIYJ3PH.js.map → chunk-KQMEJUWI.js.map} +0 -0
- /package/dist/{chunk-6YLQN7FF.js.map → chunk-LRMV5DNW.js.map} +0 -0
- /package/dist/{chunk-PJTQP6RL.js.map → chunk-LWNOC7AJ.js.map} +0 -0
- /package/dist/{chunk-AHLUW2BN.js.map → chunk-MICNOSX7.js.map} +0 -0
- /package/dist/{chunk-6UU7VPDO.js.map → chunk-MLWNMXAV.js.map} +0 -0
- /package/dist/{chunk-HLRNIO5K.js.map → chunk-MMBLSLQR.js.map} +0 -0
- /package/dist/{chunk-YJ2HC4CP.js.map → chunk-NV5XWADG.js.map} +0 -0
- /package/dist/{chunk-T5KFRIP4.js.map → chunk-O3255WPP.js.map} +0 -0
- /package/dist/{chunk-J6XKDYNZ.js.map → chunk-OSM7YS23.js.map} +0 -0
- /package/dist/{chunk-UFYU7AKL.js.map → chunk-Q7PYFSNU.js.map} +0 -0
- /package/dist/{chunk-P4ENJUBN.js.map → chunk-QMI222IJ.js.map} +0 -0
- /package/dist/{chunk-O64UTRAC.js.map → chunk-QRIRWDIW.js.map} +0 -0
- /package/dist/{chunk-C5QOWZK6.js.map → chunk-SJTOSA7E.js.map} +0 -0
- /package/dist/{chunk-M464GTNI.js.map → chunk-SRYFYAXK.js.map} +0 -0
- /package/dist/{chunk-A2Y3GEUH.js.map → chunk-TITA4HJA.js.map} +0 -0
- /package/dist/{chunk-L2ED35QZ.js.map → chunk-U7ZMIMI5.js.map} +0 -0
- /package/dist/{chunk-RIGZHHCP.js.map → chunk-UJU3Q7QJ.js.map} +0 -0
- /package/dist/{chunk-QXCVG66S.js.map → chunk-UL2ISTHR.js.map} +0 -0
- /package/dist/{chunk-I7X6K4OL.js.map → chunk-VIPMLSZP.js.map} +0 -0
- /package/dist/{chunk-AAEXTQT3.js.map → chunk-WGL6FIUE.js.map} +0 -0
- /package/dist/{chunk-ITYEOGLB.js.map → chunk-WIYKAKWE.js.map} +0 -0
- /package/dist/{chunk-NBMJ2UMA.js.map → chunk-WPHOEG56.js.map} +0 -0
- /package/dist/{chunk-G2MAZI6I.js.map → chunk-XS4QWRS3.js.map} +0 -0
- /package/dist/{chunk-VIYGTRUZ.js.map → chunk-YSW57QDM.js.map} +0 -0
- /package/dist/{chunk-KLFROH3F.js.map → chunk-YXQNZPCO.js.map} +0 -0
- /package/dist/{chunk-WZRXJ5LL.js.map → chunk-YYYJB53A.js.map} +0 -0
- /package/dist/{chunk-BHVDOW3W.js.map → chunk-ZTKQLABY.js.map} +0 -0
- /package/dist/{condition-S52W57ZO.js.map → condition-AM523RDR.js.map} +0 -0
- /package/dist/{controls-B4MTTPWO.js.map → controls-HTMH5QBP.js.map} +0 -0
- /package/dist/{controls.config-6KBCTIPN.js.map → controls.config-EEK2RBPI.js.map} +0 -0
- /package/dist/{correlation-VSBCBFFP.js.map → correlation-HKD67SPS.js.map} +0 -0
- /package/dist/{cuminc-T5ZPAGVB.js.map → cuminc-66V55MMN.js.map} +0 -0
- /package/dist/{cuminc.integration.spec-2QT3IPHU.js.map → cuminc.integration.spec-PNTOPB2L.js.map} +0 -0
- /package/dist/{customdata.inputui-5MHQQHJL.js.map → customdata.inputui-Z4WQDU6I.js.map} +0 -0
- /package/dist/{dataDownload-S4EBNHMW.js.map → dataDownload-3ZEI22OK.js.map} +0 -0
- /package/dist/{dataDownload.integration.spec-OVSIWI34.js.map → dataDownload.integration.spec-C3JRC6K5.js.map} +0 -0
- /package/dist/{databrowser.ui-EAJS3NXV.js.map → databrowser.ui-Q365SHBG.js.map} +0 -0
- /package/dist/{dnaMethylation-G3F2INDH.js.map → dnaMethylation-IFZWWBUG.js.map} +0 -0
- /package/dist/{e2pca-SLXGPVHP.js.map → e2pca-I3QXF7EM.js.map} +0 -0
- /package/dist/{ep-4HGUSDGJ.js.map → ep-2VCQ36GT.js.map} +0 -0
- /package/dist/{expclust.gdc.spec-JJ42ESKE.js.map → expclust.gdc.spec-VWIQFY67.js.map} +0 -0
- /package/dist/{facet-6WVTVKDV.js.map → facet-CHP3VUWS.js.map} +0 -0
- /package/dist/{geneExpClustering-5LOZPD5X.js.map → geneExpClustering-YDIDEH2O.js.map} +0 -0
- /package/dist/{geneExpression-PTSZWKCM.js.map → geneExpression-FA5RJRHZ.js.map} +0 -0
- /package/dist/{geneExpression-BJ46UGXW.js.map → geneExpression-X2KXJPND.js.map} +0 -0
- /package/dist/{geneExpression.unit.spec-NW5HTO7F.js.map → geneExpression.unit.spec-3LVHYZGG.js.map} +0 -0
- /package/dist/{geneORA-H65EZ7QO.js.map → geneORA-4CAYRKSN.js.map} +0 -0
- /package/dist/{geneVariant-T6GWOVZD.js.map → geneVariant-OCOTNUH4.js.map} +0 -0
- /package/dist/{geneVariant-WTDFZTXG.js.map → geneVariant-Y4L5W5HF.js.map} +0 -0
- /package/dist/{geneVariant.integration.spec-OPSBRUM3.js.map → geneVariant.integration.spec-BOJ5MM5K.js.map} +0 -0
- /package/dist/{genefusion.ui-RSBCC37C.js.map → genefusion.ui-I6HZOBIV.js.map} +0 -0
- /package/dist/{geneset-B67PAZVL.js.map → geneset-GEWKDAAT.js.map} +0 -0
- /package/dist/{genomeBrowser.spec-AUTULF4C.js.map → genomeBrowser.spec-FDEGH4DY.js.map} +0 -0
- /package/dist/{grin2-CMBP7XVH.js.map → grin2-K56B6XBZ.js.map} +0 -0
- /package/dist/{grin2-JVCNH3KW.js.map → grin2-V6FMM44N.js.map} +0 -0
- /package/dist/{gsea-H774WVPQ.js.map → gsea-UNPPRU2U.js.map} +0 -0
- /package/dist/{hierCluster-IQTXQUMI.js.map → hierCluster-DXAWRQNI.js.map} +0 -0
- /package/dist/{hierCluster-ZQJDXYBD.js.map → hierCluster-SPIQA2M2.js.map} +0 -0
- /package/dist/{hierCluster.config-ZHJTZK5L.js.map → hierCluster.config-JW6D3T3Q.js.map} +0 -0
- /package/dist/{hierCluster.integration.spec-MSJ5GHHK.js.map → hierCluster.integration.spec-5NXZY4LG.js.map} +0 -0
- /package/dist/{hierCluster.interactivity-H2GNO6AA.js.map → hierCluster.interactivity-CPPBXHM7.js.map} +0 -0
- /package/dist/{hierCluster.renderers-2TE6HMK2.js.map → hierCluster.renderers-A6MEGO2B.js.map} +0 -0
- /package/dist/{imagePlot-FMNMB7JZ.js.map → imagePlot-QLAHCULW.js.map} +0 -0
- /package/dist/{importPlot-N66G43XX.js.map → importPlot-6ITZ6U7G.js.map} +0 -0
- /package/dist/{isoformExpression-B64WLO3H.js.map → isoformExpression-7GAUF2QV.js.map} +0 -0
- /package/dist/{jspdf.es.min-DO4YWL2R.js.map → jspdf.es.min-FC3BCETM.js.map} +0 -0
- /package/dist/{launch.adhoc-MPRAJ3GN.js.map → launch.adhoc-HFHBAUR6.js.map} +0 -0
- /package/dist/{leftlabel.sample-4JCKYXED.js.map → leftlabel.sample-CWPJUCHR.js.map} +0 -0
- /package/dist/{lollipop-25ADHT7O.js.map → lollipop-QFRQLEER.js.map} +0 -0
- /package/dist/{maftimeline-FOQF6O3X.js.map → maftimeline-2DFIF4C4.js.map} +0 -0
- /package/dist/{matrix-LHLAYDTQ.js.map → matrix-3HFB5TUU.js.map} +0 -0
- /package/dist/{matrix-ZKF7NRAD.js.map → matrix-MIXK27AD.js.map} +0 -0
- /package/dist/{matrix.cells-H4TS74FJ.js.map → matrix.cells-U7AQNEBP.js.map} +0 -0
- /package/dist/{matrix.config-HE7QUDER.js.map → matrix.config-FX5MHX6O.js.map} +0 -0
- /package/dist/{matrix.controls-VILCLNSC.js.map → matrix.controls-5K7BB5Z4.js.map} +0 -0
- /package/dist/{matrix.data-2OUWYD35.js.map → matrix.data-EEIY6AO4.js.map} +0 -0
- /package/dist/{matrix.dom-IZFFS4RQ.js.map → matrix.dom-6QL3AJMW.js.map} +0 -0
- /package/dist/{matrix.groups-5BGJIOOJ.js.map → matrix.groups-CUB6UWC5.js.map} +0 -0
- /package/dist/{matrix.integration.spec-DSXZHAEY.js.map → matrix.integration.spec-ML4T7FRG.js.map} +0 -0
- /package/dist/{matrix.interactivity-VK3NWX5M.js.map → matrix.interactivity-QMPWX63Q.js.map} +0 -0
- /package/dist/{matrix.layout-PUNMMNCC.js.map → matrix.layout-7SEF6MYI.js.map} +0 -0
- /package/dist/{matrix.legend-QMERGVYU.js.map → matrix.legend-42LQGAGX.js.map} +0 -0
- /package/dist/{matrix.renderers-2KQ2NXSQ.js.map → matrix.renderers-ZF7LLER3.js.map} +0 -0
- /package/dist/{matrix.serieses-24G3XPJD.js.map → matrix.serieses-4B2WB526.js.map} +0 -0
- /package/dist/{matrix.sort-HTVT4K7C.js.map → matrix.sort-BJACNR7G.js.map} +0 -0
- /package/dist/{matrix.sort.unit.spec-EUVL76NB.js.map → matrix.sort.unit.spec-ZGSM7HDJ.js.map} +0 -0
- /package/dist/{matrix.sorterUi-PJPFXWOJ.js.map → matrix.sorterUi-W6XFYZY2.js.map} +0 -0
- /package/dist/{matrix.sorterUi.unit.spec-QWL5Y4DQ.js.map → matrix.sorterUi.unit.spec-V34ZZD7A.js.map} +0 -0
- /package/dist/{mavb-UGM5SHEF.js.map → mavb-NVQVFU6E.js.map} +0 -0
- /package/dist/{mds.fimo-64US7RTE.js.map → mds.fimo-HOCF6U6K.js.map} +0 -0
- /package/dist/{mds.samplescatterplot-JMXLXVIE.js.map → mds.samplescatterplot-ULD5BK5R.js.map} +0 -0
- /package/dist/{mds.survivalplot-RJ5UD3IU.js.map → mds.survivalplot-5US32RQD.js.map} +0 -0
- /package/dist/{oncomatrix.spec-4YLKDGFE.js.map → oncomatrix.spec-MFUJLWEP.js.map} +0 -0
- /package/dist/{plot.2dvaf-DYSU6BBN.js.map → plot.2dvaf-F4WZ4YPU.js.map} +0 -0
- /package/dist/{plot.app-NFBVLAXZ.js.map → plot.app-YFFLLBU5.js.map} +0 -0
- /package/dist/{plot.barplot-DBGTDK7J.js.map → plot.barplot-2EJ2MWQD.js.map} +0 -0
- /package/dist/{plot.boxplot-MCKZUROP.js.map → plot.boxplot-AKZM443E.js.map} +0 -0
- /package/dist/{plot.brainImaging-BBAVUEB4.js.map → plot.brainImaging-DR6WJNFZ.js.map} +0 -0
- /package/dist/{plot.dzi-YQIFOTZQ.js.map → plot.dzi-R2MR7HAT.js.map} +0 -0
- /package/dist/{plot.ssgq-MU3BRTMC.js.map → plot.ssgq-C52YIUFY.js.map} +0 -0
- /package/dist/{plot.vaf2cov-KDHZ7JXJ.js.map → plot.vaf2cov-FOD3K7BC.js.map} +0 -0
- /package/dist/{plot.wsi-G2TUGQF7.js.map → plot.wsi-D2TXYERK.js.map} +0 -0
- /package/dist/{polar-RCCZXZIU.js.map → polar-2LC35O6K.js.map} +0 -0
- /package/dist/{polar2-COQ3WIGW.js.map → polar2-QPUOEUJZ.js.map} +0 -0
- /package/dist/{profile.spec-A4ZASR2T.js.map → profile.spec-3NCDGHLX.js.map} +0 -0
- /package/dist/{profileBarchart-GB4RK5DF.js.map → profileBarchart-PPQ3NL4D.js.map} +0 -0
- /package/dist/{profileForms-O5KBHRF6.js.map → profileForms-GS3VVW65.js.map} +0 -0
- /package/dist/{profilePlot-COCLCP5B.js.map → profilePlot-DQWFH5NC.js.map} +0 -0
- /package/dist/{profileRadar-4EE3YDOH.js.map → profileRadar-KAKRDC4R.js.map} +0 -0
- /package/dist/{proteomeAbundance-JBVXUSD6.js.map → proteomeAbundance-DE4NVBCN.js.map} +0 -0
- /package/dist/{proteomeAbundance-NQVU4DOW.js.map → proteomeAbundance-LTB3QR3G.js.map} +0 -0
- /package/dist/{qualitative-QROOPDSI.js.map → qualitative-YOFAROVR.js.map} +0 -0
- /package/dist/{regression-7FQZ22OO.js.map → regression-PF6IAHJK.js.map} +0 -0
- /package/dist/{regression.inputs-F62CES3A.js.map → regression.inputs-77IUYED3.js.map} +0 -0
- /package/dist/{regression.inputs.term-BCGP7PX4.js.map → regression.inputs.term-WWCHU6KF.js.map} +0 -0
- /package/dist/{regression.inputs.values.table-D3ZXZSH7.js.map → regression.inputs.values.table-I6GM6MU7.js.map} +0 -0
- /package/dist/{regression.results-JX6RJQQP.js.map → regression.results-6GXNKYUS.js.map} +0 -0
- /package/dist/{regression.spec-ROME7T33.js.map → regression.spec-MEFQNY34.js.map} +0 -0
- /package/dist/{report-B6MM4T6B.js.map → report-LG3UKZHL.js.map} +0 -0
- /package/dist/{sampleScatter.spec-EPCMC3SR.js.map → sampleScatter.spec-D3IK7MSA.js.map} +0 -0
- /package/dist/{sampleView-77EAJ75T.js.map → sampleView-XUI2J5EC.js.map} +0 -0
- /package/dist/{samplelst-CX4NQWA7.js.map → samplelst-A7IHCBAX.js.map} +0 -0
- /package/dist/{samplematrix-PYQFAH64.js.map → samplematrix-VGUU7Q75.js.map} +0 -0
- /package/dist/{sc-X6SI5VVI.js.map → sc-UVKVT2RY.js.map} +0 -0
- /package/dist/{scatter-ZFFHAI4F.js.map → scatter-UILUYOGO.js.map} +0 -0
- /package/dist/{selectGenomeWithTklst-CZMVTBMD.js.map → selectGenomeWithTklst-LWKIMZEJ.js.map} +0 -0
- /package/dist/{singleCellCellType-GOBX7JKV.js.map → singleCellCellType-TI52WQQ4.js.map} +0 -0
- /package/dist/{singleCellGeneExpression-BLMNMEAI.js.map → singleCellGeneExpression-I5SAHMGI.js.map} +0 -0
- /package/dist/{singleCellPlot-HLD7PLQH.js.map → singleCellPlot-HRWCHYCI.js.map} +0 -0
- /package/dist/{singlecell-HL4GLGIA.js.map → singlecell-BHPP7KCO.js.map} +0 -0
- /package/dist/{singlecell-JQFPINRS.js.map → singlecell-PQNKBKR7.js.map} +0 -0
- /package/dist/{snp-EAUNFDAV.js.map → snp-V4YGI7B3.js.map} +0 -0
- /package/dist/{snp.unit.spec-AVLPMAWI.js.map → snp.unit.spec-JSUCMGNP.js.map} +0 -0
- /package/dist/{snplocus-2J7OA6OL.js.map → snplocus-3YT5NNCH.js.map} +0 -0
- /package/dist/{spliceevent.a53ss.diagram-4DU2U7NW.js.map → spliceevent.a53ss.diagram-QEQJ44YH.js.map} +0 -0
- /package/dist/{spliceevent.exonskip.diagram-GG5FGXOK.js.map → spliceevent.exonskip.diagram-HMWVSOJG.js.map} +0 -0
- /package/dist/{spliceevent.noeventdiagram-T6RNIMCM.js.map → spliceevent.noeventdiagram-L5HUCT5A.js.map} +0 -0
- /package/dist/{ssGSEA-XJWLRVFQ.js.map → ssGSEA-Z3XRCBYW.js.map} +0 -0
- /package/dist/{ssGSEA.unit.spec-MQ23ODYO.js.map → ssGSEA.unit.spec-EUCTV2XJ.js.map} +0 -0
- /package/dist/{summarizeMutationDiagnosis-ZVX7AZK7.js.map → summarizeMutationDiagnosis-HFFYLQOF.js.map} +0 -0
- /package/dist/{summarizeMutationSurvival-EWXD7TCT.js.map → summarizeMutationSurvival-OBK6YILP.js.map} +0 -0
- /package/dist/{summary-VUYBKQOC.js.map → summary-W55WWIU2.js.map} +0 -0
- /package/dist/{summary.integration.spec-EPBV5XCT.js.map → summary.integration.spec-X2PNAUKW.js.map} +0 -0
- /package/dist/{summaryInput-YX5IRGWM.js.map → summaryInput-X547Q6C7.js.map} +0 -0
- /package/dist/{survival-XOXDPXZR.js.map → survival-PAJZHZPD.js.map} +0 -0
- /package/dist/{survival-E6SRRXBB.js.map → survival-TQPWMOD5.js.map} +0 -0
- /package/dist/{svg2pdf.es.min-EZ4UYRSH.js.map → svg2pdf.es.min-CYTPRWNB.js.map} +0 -0
- /package/dist/{svgraph-D23WG3UE.js.map → svgraph-Y35C2M3D.js.map} +0 -0
- /package/dist/{svmr-UFC4TKWV.js.map → svmr-WGCIR7PE.js.map} +0 -0
- /package/dist/{table-US2K6IYZ.js.map → table-Q3B2YXEN.js.map} +0 -0
- /package/dist/{termCollection-E7S57CIN.js.map → termCollection-A6YTSM5I.js.map} +0 -0
- /package/dist/{termCollection-ZMP3VE2G.js.map → termCollection-NTFNVQ7D.js.map} +0 -0
- /package/dist/{termCollection.unit.spec-MDWK6XH3.js.map → termCollection.unit.spec-BX54PHKT.js.map} +0 -0
- /package/dist/{tk-TLQJK6R4.js.map → tk-OCBZ7YR6.js.map} +0 -0
- /package/dist/{tp.ui-NQEAKWUH.js.map → tp.ui-ZT47N2CO.js.map} +0 -0
- /package/dist/{tvs.dt-U2MINIBH.js.map → tvs.dt-BFB253O3.js.map} +0 -0
- /package/dist/{tvs.dtcnv.categorical-2OOAZJKC.js.map → tvs.dtcnv.categorical-ARGAYIDO.js.map} +0 -0
- /package/dist/{tvs.dtcnv.continuous-5ETKBJ52.js.map → tvs.dtcnv.continuous-JCU23ERV.js.map} +0 -0
- /package/dist/{tvs.dtfusion-EB4PPR3Y.js.map → tvs.dtfusion-FV64XLZI.js.map} +0 -0
- /package/dist/{tvs.dtsnvindel-IRQPTKQF.js.map → tvs.dtsnvindel-DMOXMEVL.js.map} +0 -0
- /package/dist/{tvs.dtsv-TOVXZJCR.js.map → tvs.dtsv-53FSZEPV.js.map} +0 -0
- /package/dist/{tvs.samplelst-4SCH543Y.js.map → tvs.samplelst-MVPL6VXX.js.map} +0 -0
- /package/dist/{tvs.termCollection-GGN5F6HC.js.map → tvs.termCollection-UGJXTHTG.js.map} +0 -0
- /package/dist/{violin-7D7DN74I.js.map → violin-ZLUDGSQG.js.map} +0 -0
- /package/dist/{violin.interactivity-YPJ2H6SQ.js.map → violin.interactivity-ULDOCZWW.js.map} +0 -0
- /package/dist/{violin.renderer-UK7WSA2Z.js.map → violin.renderer-KJAXPMIK.js.map} +0 -0
- /package/dist/{vocabulary-KLWZ6LRP.js.map → vocabulary-34YUQ4ZQ.js.map} +0 -0
|
@@ -0,0 +1,591 @@
|
|
|
1
|
+
import {
|
|
2
|
+
axisstyle,
|
|
3
|
+
bulk_badline,
|
|
4
|
+
disappear2 as disappear,
|
|
5
|
+
make_table_2col,
|
|
6
|
+
newpane,
|
|
7
|
+
newpane3,
|
|
8
|
+
renderSandboxFormDiv,
|
|
9
|
+
to_svg
|
|
10
|
+
} from "./chunk-NVB7MQLH.js";
|
|
11
|
+
import "./chunk-HJ6L54YS.js";
|
|
12
|
+
import "./chunk-4JON7TLI.js";
|
|
13
|
+
import "./chunk-7RN3L2BX.js";
|
|
14
|
+
import {
|
|
15
|
+
Menu
|
|
16
|
+
} from "./chunk-A6TQGNDQ.js";
|
|
17
|
+
import "./chunk-HYZG6OPC.js";
|
|
18
|
+
import "./chunk-FN5XPUPH.js";
|
|
19
|
+
import "./chunk-LSEFWW72.js";
|
|
20
|
+
import "./chunk-5EF5U7MX.js";
|
|
21
|
+
import "./chunk-2K5DSRBJ.js";
|
|
22
|
+
import "./chunk-UCLS2SVB.js";
|
|
23
|
+
import "./chunk-MVTCBVSX.js";
|
|
24
|
+
import "./chunk-SEQLC4AD.js";
|
|
25
|
+
import "./chunk-L4QG7XZE.js";
|
|
26
|
+
import "./chunk-DQC5FFGV.js";
|
|
27
|
+
import "./chunk-KQMEJUWI.js";
|
|
28
|
+
import "./chunk-UJU3Q7QJ.js";
|
|
29
|
+
import "./chunk-WGL6FIUE.js";
|
|
30
|
+
import "./chunk-6ITDJ5UR.js";
|
|
31
|
+
import "./chunk-XYFDBYOY.js";
|
|
32
|
+
import "./chunk-TV74I3Y5.js";
|
|
33
|
+
import {
|
|
34
|
+
category10_default
|
|
35
|
+
} from "./chunk-IH7ILDJS.js";
|
|
36
|
+
import {
|
|
37
|
+
axisBottom,
|
|
38
|
+
axisLeft
|
|
39
|
+
} from "./chunk-LOZEKOES.js";
|
|
40
|
+
import "./chunk-TOU7EVFQ.js";
|
|
41
|
+
import {
|
|
42
|
+
format,
|
|
43
|
+
linear,
|
|
44
|
+
log,
|
|
45
|
+
ordinal,
|
|
46
|
+
time,
|
|
47
|
+
timeParse
|
|
48
|
+
} from "./chunk-OAWQ6LOO.js";
|
|
49
|
+
import "./chunk-SEEYV6P2.js";
|
|
50
|
+
import {
|
|
51
|
+
select_default
|
|
52
|
+
} from "./chunk-NDWTN4U5.js";
|
|
53
|
+
import "./chunk-OMR2DT66.js";
|
|
54
|
+
import "./chunk-HFNDKYVF.js";
|
|
55
|
+
|
|
56
|
+
// src/maftimeline.js
|
|
57
|
+
var zerovalue = 1e-5;
|
|
58
|
+
var showcircle = true;
|
|
59
|
+
var maflogscale = true;
|
|
60
|
+
var tip = new Menu();
|
|
61
|
+
function maftimelineui(genomes, holder, sandbox_header) {
|
|
62
|
+
let pane, inputdiv, gselect, filediv, saydiv, visualdiv;
|
|
63
|
+
if (holder !== void 0) [inputdiv, gselect, filediv, saydiv, visualdiv] = renderSandboxFormDiv(holder, genomes);
|
|
64
|
+
else {
|
|
65
|
+
;
|
|
66
|
+
[pane, inputdiv, gselect, filediv, saydiv, visualdiv] = newpane3(100, 100, genomes);
|
|
67
|
+
pane.header.text("MAF timeline plot");
|
|
68
|
+
}
|
|
69
|
+
inputdiv.append("p").html(
|
|
70
|
+
"<a href=https://docs.google.com/document/d/1WXlCVHLq_P2jGiRGJ55uzXCC6p-6Jqn7h406RUID_xo/edit?usp=sharing target=_blank>File format</a>"
|
|
71
|
+
);
|
|
72
|
+
inputdiv.append("p").html("<a href=https://www.dropbox.com/s/940wfo6rd1ttlim/example.maftimeline?dl=0 target=_blank>Example file</a>");
|
|
73
|
+
{
|
|
74
|
+
const id = Math.random().toString();
|
|
75
|
+
const p = inputdiv.append("p");
|
|
76
|
+
p.append("input").attr("type", "checkbox").attr("id", id).property("checked", true).style("margin-right", "5px").on("change", () => {
|
|
77
|
+
maflogscale = !maflogscale;
|
|
78
|
+
});
|
|
79
|
+
p.append("label").attr("for", id).text("Y axis (MAF) log10 scale");
|
|
80
|
+
}
|
|
81
|
+
const fileui = () => {
|
|
82
|
+
filediv.selectAll("*").remove();
|
|
83
|
+
const butt = filediv.append("input").attr("type", "file").on("change", (event) => {
|
|
84
|
+
saydiv.text("");
|
|
85
|
+
const file = event.target.files[0];
|
|
86
|
+
if (!file) {
|
|
87
|
+
fileui();
|
|
88
|
+
return;
|
|
89
|
+
}
|
|
90
|
+
if (file.size == 0) {
|
|
91
|
+
saydiv.text("Wrong file: " + file.name);
|
|
92
|
+
fileui();
|
|
93
|
+
return;
|
|
94
|
+
}
|
|
95
|
+
const reader = new FileReader();
|
|
96
|
+
reader.onload = (event2) => {
|
|
97
|
+
const lines = event2.target.result.trim().split(/\r?\n/);
|
|
98
|
+
const [err, header] = parseheader(lines[0].trim());
|
|
99
|
+
if (err) {
|
|
100
|
+
saydiv.text("File header error: " + err);
|
|
101
|
+
fileui();
|
|
102
|
+
return;
|
|
103
|
+
}
|
|
104
|
+
const badlines = [];
|
|
105
|
+
const data = {};
|
|
106
|
+
let good = 0;
|
|
107
|
+
for (let i = 1; i < lines.length; i++) {
|
|
108
|
+
if (lines[i] == "") continue;
|
|
109
|
+
if (lines[i][0] == "#") continue;
|
|
110
|
+
const m = parseline(i, lines[i], header, badlines, data);
|
|
111
|
+
if (m) {
|
|
112
|
+
good++;
|
|
113
|
+
}
|
|
114
|
+
}
|
|
115
|
+
if (badlines.length) {
|
|
116
|
+
bulk_badline(header, badlines);
|
|
117
|
+
}
|
|
118
|
+
if (good == 0) {
|
|
119
|
+
fileui();
|
|
120
|
+
return;
|
|
121
|
+
}
|
|
122
|
+
let visual_holder;
|
|
123
|
+
if (pane) {
|
|
124
|
+
disappear(pane.pane);
|
|
125
|
+
const pane2 = newpane({ x: 100, y: 100, toshrink: true });
|
|
126
|
+
pane2.header.html('<span style="opacity:.5;font-size:.7em">MAF TIMELINE</span> ' + file.name);
|
|
127
|
+
visual_holder = pane2.body;
|
|
128
|
+
}
|
|
129
|
+
if (holder !== void 0) {
|
|
130
|
+
visual_holder = visualdiv.html('<span style="opacity:.5;font-size:.7em">MAF TIMELINE</span> ' + file.name);
|
|
131
|
+
inputdiv.selectAll("*").remove();
|
|
132
|
+
saydiv.text("");
|
|
133
|
+
}
|
|
134
|
+
render(data, header, visual_holder);
|
|
135
|
+
};
|
|
136
|
+
reader.onerror = function() {
|
|
137
|
+
saydiv.text("Error reading file " + file.name);
|
|
138
|
+
fileui();
|
|
139
|
+
return;
|
|
140
|
+
};
|
|
141
|
+
saydiv.text("Parsing file " + file.name + " ...");
|
|
142
|
+
reader.readAsText(file, "utf8");
|
|
143
|
+
});
|
|
144
|
+
setTimeout(() => butt.node().focus(), 1100);
|
|
145
|
+
};
|
|
146
|
+
fileui();
|
|
147
|
+
}
|
|
148
|
+
function parseheader(line) {
|
|
149
|
+
const header = line.toLowerCase().split(" ");
|
|
150
|
+
if (header.length <= 1) return ["columns must be separated by tab"];
|
|
151
|
+
const htry = (...lst) => {
|
|
152
|
+
for (const i2 of lst) {
|
|
153
|
+
const j = header.indexOf(i2);
|
|
154
|
+
if (j != -1) return j;
|
|
155
|
+
}
|
|
156
|
+
return -1;
|
|
157
|
+
};
|
|
158
|
+
let i = htry("person", "patient", "caseid");
|
|
159
|
+
if (i == -1) return ["person missing"];
|
|
160
|
+
header[i] = "patient";
|
|
161
|
+
i = htry("sample", "sampleid");
|
|
162
|
+
if (i == -1) return ["sample missing"];
|
|
163
|
+
header[i] = "sample";
|
|
164
|
+
i = htry("snv4");
|
|
165
|
+
if (i == -1) return ["snv4 missing"];
|
|
166
|
+
header[i] = "snv4";
|
|
167
|
+
i = htry("date", "dateofsample");
|
|
168
|
+
if (i == -1) return ["date missing"];
|
|
169
|
+
header[i] = "date";
|
|
170
|
+
i = htry("mutant_readcount", "mutantcount");
|
|
171
|
+
if (i != -1) header[i] = "mutant_readcount";
|
|
172
|
+
i = htry("ref_readcount", "refcount");
|
|
173
|
+
if (i != -1) header[i] = "ref_readcount";
|
|
174
|
+
i = htry("total_readcount", "coveragecount");
|
|
175
|
+
if (i == -1) return ["total_readcount missing"];
|
|
176
|
+
header[i] = "coverage";
|
|
177
|
+
i = htry("maf");
|
|
178
|
+
if (i == -1) return ["maf missing"];
|
|
179
|
+
header[i] = "maf";
|
|
180
|
+
i = htry("call_manual");
|
|
181
|
+
if (i != -1) header[i] = "call_manual";
|
|
182
|
+
return [null, header];
|
|
183
|
+
}
|
|
184
|
+
function parseline(i, line, header, badlines, data) {
|
|
185
|
+
const lst = line.split(" ");
|
|
186
|
+
const m = {};
|
|
187
|
+
for (let j = 0; j < header.length; j++) {
|
|
188
|
+
m[header[j]] = lst[j];
|
|
189
|
+
}
|
|
190
|
+
if (!m.patient) {
|
|
191
|
+
badlines.push([i, "missing patient", lst]);
|
|
192
|
+
return;
|
|
193
|
+
}
|
|
194
|
+
if (!data[m.patient]) {
|
|
195
|
+
data[m.patient] = {
|
|
196
|
+
snv4: {},
|
|
197
|
+
show: false
|
|
198
|
+
};
|
|
199
|
+
}
|
|
200
|
+
if (!m.snv4) {
|
|
201
|
+
badlines.push([i, "missing snv4", lst]);
|
|
202
|
+
return;
|
|
203
|
+
}
|
|
204
|
+
if (!data[m.patient].snv4[m.snv4]) {
|
|
205
|
+
data[m.patient].snv4[m.snv4] = {
|
|
206
|
+
mutationname: m.snv4,
|
|
207
|
+
samples: [],
|
|
208
|
+
subidx: void 0
|
|
209
|
+
};
|
|
210
|
+
}
|
|
211
|
+
if (m.gene) {
|
|
212
|
+
data[m.patient].snv4[m.snv4].gene = m.gene;
|
|
213
|
+
}
|
|
214
|
+
if (!m.maf) {
|
|
215
|
+
badlines.push([i, "missing maf", lst]);
|
|
216
|
+
return;
|
|
217
|
+
}
|
|
218
|
+
let v = Number.parseFloat(m.maf);
|
|
219
|
+
if (Number.isNaN(v)) {
|
|
220
|
+
badlines.push([i, "invalid maf", lst]);
|
|
221
|
+
return;
|
|
222
|
+
}
|
|
223
|
+
if (v < zerovalue) {
|
|
224
|
+
v = zerovalue;
|
|
225
|
+
}
|
|
226
|
+
m.maf = v;
|
|
227
|
+
if (!m.coverage) {
|
|
228
|
+
badlines.push([i, "missing total_readcount", lst]);
|
|
229
|
+
return;
|
|
230
|
+
}
|
|
231
|
+
if (m.call_manual && m.call_manual == "wildtype") {
|
|
232
|
+
m.maf = zerovalue;
|
|
233
|
+
}
|
|
234
|
+
v = Number.parseInt(m.coverage);
|
|
235
|
+
if (Number.isNaN(v)) {
|
|
236
|
+
badlines.push([i, "invalid total_readcount", lst]);
|
|
237
|
+
return;
|
|
238
|
+
}
|
|
239
|
+
m.coverage = v;
|
|
240
|
+
let date;
|
|
241
|
+
if (m.date) {
|
|
242
|
+
const f = timeParse("%m/%d/%Y");
|
|
243
|
+
date = f(m.date);
|
|
244
|
+
m.Date = m.date;
|
|
245
|
+
} else {
|
|
246
|
+
badlines.push([i, "missing date", lst]);
|
|
247
|
+
return;
|
|
248
|
+
}
|
|
249
|
+
if (date == null) {
|
|
250
|
+
badlines.push([i, "cannot parse date", lst]);
|
|
251
|
+
return;
|
|
252
|
+
}
|
|
253
|
+
m.date = date;
|
|
254
|
+
if (!m.sample) {
|
|
255
|
+
badlines.push([i, "missing sample", lst]);
|
|
256
|
+
return;
|
|
257
|
+
}
|
|
258
|
+
data[m.patient].snv4[m.snv4].samples.push(m);
|
|
259
|
+
return true;
|
|
260
|
+
}
|
|
261
|
+
function render(data, header, holder) {
|
|
262
|
+
const table = holder.append("table").style("margin", "20px");
|
|
263
|
+
const tr1 = table.append("tr");
|
|
264
|
+
let td = tr1.append("td").style("vertical-align", "top").attr("rowspan", 2);
|
|
265
|
+
td.append("button").text("Toggle circle visibility").on("click", () => {
|
|
266
|
+
showcircle = !showcircle;
|
|
267
|
+
for (const n in data) {
|
|
268
|
+
if (data[n].show) {
|
|
269
|
+
data[n].handle.node().click();
|
|
270
|
+
break;
|
|
271
|
+
}
|
|
272
|
+
}
|
|
273
|
+
});
|
|
274
|
+
const patientholder = td.append("div").style("margin-top", "10px");
|
|
275
|
+
const td1 = tr1.append("td").style("vertical-align", "top");
|
|
276
|
+
const graphholder = td1.append("div").style("display", "inline-block");
|
|
277
|
+
const controlholder = td1.append("div").style("display", "inline-block").style("vertical-align", "top");
|
|
278
|
+
const tr2 = table.append("tr");
|
|
279
|
+
const tiantable = tr2.append("td").append("table").style("border-spacing", "20px").style("border-collapse", "separate");
|
|
280
|
+
const gtr1 = tiantable.append("tr");
|
|
281
|
+
td = gtr1.append("td").style("vertical-align", "top");
|
|
282
|
+
td.append("div").text("Shared").style("font-size", "2em");
|
|
283
|
+
const graph1holder = td.append("div").style("border", "solid 1px black");
|
|
284
|
+
td = gtr1.append("td").style("vertical-align", "top");
|
|
285
|
+
td.append("div").text("Rising").style("font-size", "2em");
|
|
286
|
+
const graph2holder = td.append("div").style("border", "solid 1px black");
|
|
287
|
+
const gtr2 = tiantable.append("tr");
|
|
288
|
+
td = gtr2.append("td").style("vertical-align", "top");
|
|
289
|
+
td.append("div").text("Falling").style("font-size", "2em");
|
|
290
|
+
const graph3holder = td.append("div").style("border", "solid 1px black");
|
|
291
|
+
td = gtr2.append("td").style("vertical-align", "top");
|
|
292
|
+
td.append("div").text("R-only").style("font-size", "2em");
|
|
293
|
+
const graph4holder = td.append("div").style("border", "solid 1px black");
|
|
294
|
+
for (const patient in data) {
|
|
295
|
+
const snvlst = [];
|
|
296
|
+
const colors = ordinal(category10_default);
|
|
297
|
+
for (const x in data[patient].snv4) {
|
|
298
|
+
const snv = data[patient].snv4[x];
|
|
299
|
+
snv.show = true;
|
|
300
|
+
snv.color = colors(snv.mutationname);
|
|
301
|
+
snv.samples.sort((a, b) => a.date - b.date);
|
|
302
|
+
for (const s of snv.samples) {
|
|
303
|
+
s.color = snv.color;
|
|
304
|
+
}
|
|
305
|
+
snvlst.push(snv);
|
|
306
|
+
}
|
|
307
|
+
const div = patientholder.append("div").classed("sja_menuoption", true).style("color", "black").text(patient).on("click", () => {
|
|
308
|
+
for (const pn in data) {
|
|
309
|
+
data[pn].handle.style("color", "black");
|
|
310
|
+
data[pn].show = false;
|
|
311
|
+
}
|
|
312
|
+
data[patient].handle.style("color", "red");
|
|
313
|
+
data[patient].show = true;
|
|
314
|
+
makegraph(snvlst, header, graphholder);
|
|
315
|
+
makesubgraph(snvlst, graph1holder, graph2holder, graph3holder, graph4holder);
|
|
316
|
+
makecontrol(snvlst, header, controlholder, graphholder, graph1holder, graph2holder, graph3holder, graph4holder);
|
|
317
|
+
});
|
|
318
|
+
data[patient].handle = div;
|
|
319
|
+
}
|
|
320
|
+
for (const n in data) {
|
|
321
|
+
data[n].handle.node().click();
|
|
322
|
+
break;
|
|
323
|
+
}
|
|
324
|
+
}
|
|
325
|
+
function makesubgraph(snvlst, g1, g2, g3, g4) {
|
|
326
|
+
g1.selectAll("*").remove();
|
|
327
|
+
g2.selectAll("*").remove();
|
|
328
|
+
g3.selectAll("*").remove();
|
|
329
|
+
g4.selectAll("*").remove();
|
|
330
|
+
const l1 = [];
|
|
331
|
+
const l2 = [];
|
|
332
|
+
const l3 = [];
|
|
333
|
+
const l4 = [];
|
|
334
|
+
for (const snv of snvlst) {
|
|
335
|
+
switch (snv.subidx) {
|
|
336
|
+
case 1:
|
|
337
|
+
l1.push(snv);
|
|
338
|
+
break;
|
|
339
|
+
case 2:
|
|
340
|
+
l2.push(snv);
|
|
341
|
+
break;
|
|
342
|
+
case 3:
|
|
343
|
+
l3.push(snv);
|
|
344
|
+
break;
|
|
345
|
+
case 4:
|
|
346
|
+
l4.push(snv);
|
|
347
|
+
break;
|
|
348
|
+
}
|
|
349
|
+
}
|
|
350
|
+
if (l1.length) {
|
|
351
|
+
makegraph(l1, null, g1, true);
|
|
352
|
+
} else {
|
|
353
|
+
g1.append("div").style("padding", "60px").style("background-color", "#ededed").text("no data");
|
|
354
|
+
}
|
|
355
|
+
if (l2.length) {
|
|
356
|
+
makegraph(l2, null, g2, true);
|
|
357
|
+
} else {
|
|
358
|
+
g2.append("div").style("padding", "60px").style("background-color", "#ededed").text("no data");
|
|
359
|
+
}
|
|
360
|
+
if (l3.length) {
|
|
361
|
+
makegraph(l3, null, g3, true);
|
|
362
|
+
} else {
|
|
363
|
+
g3.append("div").style("padding", "60px").style("background-color", "#ededed").text("no data");
|
|
364
|
+
}
|
|
365
|
+
if (l4.length) {
|
|
366
|
+
makegraph(l4, null, g4, true);
|
|
367
|
+
} else {
|
|
368
|
+
g4.append("div").style("padding", "60px").style("background-color", "#ededed").text("no data");
|
|
369
|
+
}
|
|
370
|
+
}
|
|
371
|
+
function makegraph(snvlst0, header, holder, issub) {
|
|
372
|
+
holder.selectAll("*").remove();
|
|
373
|
+
const samples = [];
|
|
374
|
+
const snvlst = [];
|
|
375
|
+
for (const snv of snvlst0) {
|
|
376
|
+
if (!issub && !snv.show) continue;
|
|
377
|
+
snvlst.push(snv);
|
|
378
|
+
for (const s of snv.samples) {
|
|
379
|
+
samples.push(s);
|
|
380
|
+
}
|
|
381
|
+
}
|
|
382
|
+
if (snvlst.length == 0) return;
|
|
383
|
+
let mindate = snvlst[0].samples[0].date;
|
|
384
|
+
let maxdate = snvlst[0].samples[0].date;
|
|
385
|
+
let maxmaf = snvlst[0].samples[0].maf;
|
|
386
|
+
let maxcoverage = snvlst[0].samples[0].coverage;
|
|
387
|
+
for (const snv of snvlst) {
|
|
388
|
+
for (const s of snv.samples) {
|
|
389
|
+
mindate = Math.min(mindate, s.date);
|
|
390
|
+
maxdate = Math.max(maxdate, s.date);
|
|
391
|
+
maxmaf = Math.max(maxmaf, s.maf);
|
|
392
|
+
maxcoverage = Math.max(maxcoverage, s.coverage);
|
|
393
|
+
}
|
|
394
|
+
}
|
|
395
|
+
const svg = holder.append("svg");
|
|
396
|
+
const toppad = 30, rightpad = 200, yaxisw = 100, xaxish = 50;
|
|
397
|
+
let width = 600;
|
|
398
|
+
let height = 400;
|
|
399
|
+
let xpad, ypad, minradius;
|
|
400
|
+
const xaxisg = svg.append("g");
|
|
401
|
+
const yaxisg = svg.append("g");
|
|
402
|
+
const drag = svg.append("text").text("drag to resize").attr("class", "sja_clb").attr("text-anchor", "end").on("mousedown", (event) => {
|
|
403
|
+
event.preventDefault();
|
|
404
|
+
const x = event.clientX;
|
|
405
|
+
const y = event.clientY;
|
|
406
|
+
const w0 = width;
|
|
407
|
+
const h0 = height;
|
|
408
|
+
const body = select_default(document.body);
|
|
409
|
+
body.on("mousemove", (event2) => {
|
|
410
|
+
setsize(w0 + event2.clientX - x, h0 + event2.clientY - y);
|
|
411
|
+
}).on("mouseup", () => {
|
|
412
|
+
body.on("mousemove", null).on("mouseup", null);
|
|
413
|
+
});
|
|
414
|
+
});
|
|
415
|
+
const xscale = time().domain([mindate, maxdate]);
|
|
416
|
+
const yscale = (maflogscale ? log() : linear()).domain([zerovalue, 1]);
|
|
417
|
+
const rscale = linear().domain([1, maxcoverage]);
|
|
418
|
+
const g = svg.append("g");
|
|
419
|
+
const lines = g.selectAll().data(snvlst).enter().append("path").attr("stroke", (d) => d.color).attr("fill", "none");
|
|
420
|
+
let circles;
|
|
421
|
+
if (showcircle) {
|
|
422
|
+
circles = g.selectAll().data(samples).enter().append("circle").attr("fill", (d) => d.color).attr("fill-opacity", 0.1).on("mouseover", (event, d) => {
|
|
423
|
+
event.target.setAttribute("fill-opacity", 0.4);
|
|
424
|
+
tip.clear();
|
|
425
|
+
tip.show(event.clientX, event.clientY);
|
|
426
|
+
const lst = [];
|
|
427
|
+
for (const k in d) {
|
|
428
|
+
if (k == "color") continue;
|
|
429
|
+
if (k == "gene") {
|
|
430
|
+
lst.push({ k: "gene", v: '<span style="color:' + d.color + '">' + d.gene + "</span>" });
|
|
431
|
+
continue;
|
|
432
|
+
}
|
|
433
|
+
if (k == "date") continue;
|
|
434
|
+
if (k == "url") {
|
|
435
|
+
lst.push({ k: "URL", v: "<a href=" + d.url + " target=_blank>LINK</a>" });
|
|
436
|
+
continue;
|
|
437
|
+
}
|
|
438
|
+
lst.push({ k, v: d[k] });
|
|
439
|
+
}
|
|
440
|
+
make_table_2col(tip.d, lst);
|
|
441
|
+
}).on("mouseout", (event) => {
|
|
442
|
+
event.target.setAttribute("fill-opacity", 0.1);
|
|
443
|
+
});
|
|
444
|
+
}
|
|
445
|
+
const legend = svg.append("g");
|
|
446
|
+
const setsize = (w, h) => {
|
|
447
|
+
width = w;
|
|
448
|
+
height = h;
|
|
449
|
+
minradius = 2;
|
|
450
|
+
const maxradius = Math.max(width, height) / 30;
|
|
451
|
+
xpad = maxradius;
|
|
452
|
+
ypad = maxradius;
|
|
453
|
+
rscale.range([Math.pow(minradius, 2), Math.pow(maxradius, 2)]);
|
|
454
|
+
xscale.range([0, width]);
|
|
455
|
+
yscale.range([height, 0]);
|
|
456
|
+
svg.attr("width", yaxisw + xpad + width + rightpad).attr("height", toppad + height + ypad + xaxish);
|
|
457
|
+
xaxisg.attr("transform", "translate(" + (yaxisw + xpad) + "," + (toppad + height + ypad) + ")");
|
|
458
|
+
yaxisg.attr("transform", "translate(" + yaxisw + "," + toppad + ")");
|
|
459
|
+
drag.attr("x", yaxisw + xpad + width).attr("y", toppad + height + ypad + xaxish - 4);
|
|
460
|
+
axisstyle({
|
|
461
|
+
axis: xaxisg.call(axisBottom().scale(xscale)),
|
|
462
|
+
showline: true,
|
|
463
|
+
color: "black",
|
|
464
|
+
fontsize: Math.max(12, Math.min(20, width / 100))
|
|
465
|
+
});
|
|
466
|
+
axisstyle({
|
|
467
|
+
axis: yaxisg.call(
|
|
468
|
+
axisLeft().scale(yscale).tickValues([1, 0.1, 0.01, 1e-3, 1e-4, zerovalue]).tickFormat(format(" "))
|
|
469
|
+
),
|
|
470
|
+
showline: true,
|
|
471
|
+
color: "black",
|
|
472
|
+
fontsize: Math.max(12, Math.min(20, height / 100))
|
|
473
|
+
});
|
|
474
|
+
g.attr("transform", "translate(" + (yaxisw + xpad) + "," + toppad + ")");
|
|
475
|
+
lines.attr("d", (d) => {
|
|
476
|
+
const lst = [];
|
|
477
|
+
for (let i = 0; i < d.samples.length; i++) {
|
|
478
|
+
const s = d.samples[i];
|
|
479
|
+
lst.push((i == 0 ? "M" : "L") + " " + xscale(s.date) + " " + yscale(s.maf));
|
|
480
|
+
}
|
|
481
|
+
return lst.join(" ");
|
|
482
|
+
});
|
|
483
|
+
if (showcircle) {
|
|
484
|
+
circles.attr("cx", (d) => xscale(d.date)).attr("cy", (d) => yscale(d.maf)).attr("r", (d) => Math.sqrt(rscale(d.coverage)));
|
|
485
|
+
}
|
|
486
|
+
legend.attr("transform", "translate(" + (yaxisw + xpad + width + maxradius + 5) + "," + toppad + ")");
|
|
487
|
+
legend.selectAll("*").remove();
|
|
488
|
+
let y = minradius;
|
|
489
|
+
if (showcircle) {
|
|
490
|
+
legend.append("circle").attr("r", minradius).attr("cx", minradius).attr("cy", y).attr("fill", "#ccc");
|
|
491
|
+
legend.append("text").text(1).attr("x", minradius * 2 + 10).attr("y", y).attr("font-size", 10).attr("dominant-baseline", "central");
|
|
492
|
+
y += 5 + minradius + maxradius;
|
|
493
|
+
legend.append("circle").attr("r", maxradius).attr("cx", maxradius).attr("cy", y).attr("fill", "#ccc");
|
|
494
|
+
legend.append("text").text(maxcoverage).attr("x", maxradius * 2 + 10).attr("y", y).attr("font-size", 15).attr("dominant-baseline", "central");
|
|
495
|
+
y += 15 + maxradius;
|
|
496
|
+
}
|
|
497
|
+
const fontsize = 12;
|
|
498
|
+
for (const snv of snvlst) {
|
|
499
|
+
legend.append("line").attr("x2", 30).attr("y1", y).attr("y2", y).attr("stroke", snv.color);
|
|
500
|
+
if (showcircle) {
|
|
501
|
+
legend.append("circle").attr("cx", 15).attr("cy", y).attr("r", 8).attr("fill", snv.color).attr("fill-opacity", 0.1);
|
|
502
|
+
}
|
|
503
|
+
legend.append("text").text(snv.gene).attr("dominant-baseline", "central").attr("font-size", fontsize).attr("x", 30 + 10).attr("y", y).attr("fill", snv.color).style("cursor", "default").on("mouseover", (event) => {
|
|
504
|
+
event.target.setAttribute("font-weight", "bold");
|
|
505
|
+
lines.filter((d) => d.mutationname == snv.mutationname).attr("stroke-width", 3);
|
|
506
|
+
}).on("mouseout", (event) => {
|
|
507
|
+
event.target.setAttribute("font-weight", "normal");
|
|
508
|
+
lines.filter((d) => d.mutationname == snv.mutationname).attr("stroke-width", 1);
|
|
509
|
+
});
|
|
510
|
+
y += fontsize + 10;
|
|
511
|
+
}
|
|
512
|
+
};
|
|
513
|
+
setsize(width, height);
|
|
514
|
+
holder.append("div").style("text-align", "right").append("button").text("SVG").on("click", () => {
|
|
515
|
+
to_svg(svg.node(), "maf-timeline");
|
|
516
|
+
});
|
|
517
|
+
}
|
|
518
|
+
function makecontrol(snvlst, header, holder, graphholder, g1, g2, g3, g4) {
|
|
519
|
+
holder.selectAll("*").remove();
|
|
520
|
+
const table = holder.append("table");
|
|
521
|
+
for (const snv of snvlst) {
|
|
522
|
+
const tr = table.append("tr");
|
|
523
|
+
const td1 = tr.append("td");
|
|
524
|
+
td1.text(snv.gene).style("color", snv.color);
|
|
525
|
+
const td2 = tr.append("td");
|
|
526
|
+
const checkbox = td2.append("input").attr("type", "checkbox").style("zoom", "150%").property("checked", snv.show);
|
|
527
|
+
snv.checkbox = checkbox;
|
|
528
|
+
checkbox.on("change", (event) => {
|
|
529
|
+
snv.show = event.target.checked;
|
|
530
|
+
makegraph(snvlst, header, graphholder);
|
|
531
|
+
});
|
|
532
|
+
const butt = td2.append("button").style("margin-left", "5px").text("Only").on("click", () => {
|
|
533
|
+
for (const s2 of snvlst) {
|
|
534
|
+
s2.show = false;
|
|
535
|
+
s2.checkbox.property("checked", false);
|
|
536
|
+
}
|
|
537
|
+
snv.show = true;
|
|
538
|
+
snv.checkbox.property("checked", true);
|
|
539
|
+
makegraph(snvlst, header, graphholder);
|
|
540
|
+
});
|
|
541
|
+
let cname = Math.random();
|
|
542
|
+
const td11 = tr.append("td");
|
|
543
|
+
const c1 = td11.append("input").attr("type", "checkbox").attr("id", cname).on("change", (event) => cchange(1, event.target));
|
|
544
|
+
td11.append("label").html(" shared").attr("for", cname);
|
|
545
|
+
cname = Math.random();
|
|
546
|
+
const td22 = tr.append("td");
|
|
547
|
+
const c2 = td22.append("input").attr("type", "checkbox").attr("id", cname).on("change", (event) => cchange(2, event.target));
|
|
548
|
+
td22.append("label").html(" rising").attr("for", cname);
|
|
549
|
+
cname = Math.random();
|
|
550
|
+
const td33 = tr.append("td");
|
|
551
|
+
const c3 = td33.append("input").attr("type", "checkbox").attr("id", cname).on("change", (event) => cchange(3, event.target));
|
|
552
|
+
td33.append("label").html(" falling").attr("for", cname);
|
|
553
|
+
cname = Math.random();
|
|
554
|
+
const td44 = tr.append("td");
|
|
555
|
+
const c4 = td44.append("input").attr("type", "checkbox").attr("id", cname).on("change", (event) => cchange(4, event.target));
|
|
556
|
+
td44.append("label").html(" R-only").attr("for", cname);
|
|
557
|
+
if (snv.subidx == 1) c1.property("checked", true);
|
|
558
|
+
if (snv.subidx == 2) c2.property("checked", true);
|
|
559
|
+
if (snv.subidx == 3) c3.property("checked", true);
|
|
560
|
+
if (snv.subidx == 4) c4.property("checked", true);
|
|
561
|
+
const cchange = (which, check) => {
|
|
562
|
+
if (!check.checked) {
|
|
563
|
+
snv.subidx = -1;
|
|
564
|
+
} else {
|
|
565
|
+
snv.subidx = which;
|
|
566
|
+
if (which == 1) {
|
|
567
|
+
c2.property("checked", false);
|
|
568
|
+
c3.property("checked", false);
|
|
569
|
+
c4.property("checked", false);
|
|
570
|
+
} else if (which == 2) {
|
|
571
|
+
c1.property("checked", false);
|
|
572
|
+
c3.property("checked", false);
|
|
573
|
+
c4.property("checked", false);
|
|
574
|
+
} else if (which == 3) {
|
|
575
|
+
c1.property("checked", false);
|
|
576
|
+
c2.property("checked", false);
|
|
577
|
+
c4.property("checked", false);
|
|
578
|
+
} else {
|
|
579
|
+
c1.property("checked", false);
|
|
580
|
+
c2.property("checked", false);
|
|
581
|
+
c3.property("checked", false);
|
|
582
|
+
}
|
|
583
|
+
}
|
|
584
|
+
makesubgraph(snvlst, g1, g2, g3, g4);
|
|
585
|
+
};
|
|
586
|
+
}
|
|
587
|
+
}
|
|
588
|
+
export {
|
|
589
|
+
maftimelineui as default
|
|
590
|
+
};
|
|
591
|
+
//# sourceMappingURL=maftimeline-2DFIF4C4.js.map
|
|
@@ -0,0 +1,57 @@
|
|
|
1
|
+
import {
|
|
2
|
+
Matrix,
|
|
3
|
+
componentInit,
|
|
4
|
+
makeChartBtnMenu,
|
|
5
|
+
matrixInit
|
|
6
|
+
} from "./chunk-IBBMKCO7.js";
|
|
7
|
+
import "./chunk-QRIRWDIW.js";
|
|
8
|
+
import "./chunk-YDWRIMCT.js";
|
|
9
|
+
import "./chunk-25RP5OSE.js";
|
|
10
|
+
import "./chunk-3DCABJHB.js";
|
|
11
|
+
import "./chunk-WPHOEG56.js";
|
|
12
|
+
import "./chunk-WJGVQJSX.js";
|
|
13
|
+
import "./chunk-D4QFQQWJ.js";
|
|
14
|
+
import "./chunk-QMI222IJ.js";
|
|
15
|
+
import "./chunk-DNCSPTOQ.js";
|
|
16
|
+
import "./chunk-5UMPBVA6.js";
|
|
17
|
+
import "./chunk-VYIO7T6J.js";
|
|
18
|
+
import "./chunk-UL2ISTHR.js";
|
|
19
|
+
import "./chunk-LBXZGYU5.js";
|
|
20
|
+
import "./chunk-A5TSPTYC.js";
|
|
21
|
+
import "./chunk-V2OJLJSK.js";
|
|
22
|
+
import "./chunk-NVB7MQLH.js";
|
|
23
|
+
import "./chunk-HJ6L54YS.js";
|
|
24
|
+
import "./chunk-4JON7TLI.js";
|
|
25
|
+
import "./chunk-7RN3L2BX.js";
|
|
26
|
+
import "./chunk-A6TQGNDQ.js";
|
|
27
|
+
import "./chunk-HYZG6OPC.js";
|
|
28
|
+
import "./chunk-FN5XPUPH.js";
|
|
29
|
+
import "./chunk-LSEFWW72.js";
|
|
30
|
+
import "./chunk-5EF5U7MX.js";
|
|
31
|
+
import "./chunk-2K5DSRBJ.js";
|
|
32
|
+
import "./chunk-UCLS2SVB.js";
|
|
33
|
+
import "./chunk-MVTCBVSX.js";
|
|
34
|
+
import "./chunk-SEQLC4AD.js";
|
|
35
|
+
import "./chunk-L4QG7XZE.js";
|
|
36
|
+
import "./chunk-DQC5FFGV.js";
|
|
37
|
+
import "./chunk-KQMEJUWI.js";
|
|
38
|
+
import "./chunk-UJU3Q7QJ.js";
|
|
39
|
+
import "./chunk-WGL6FIUE.js";
|
|
40
|
+
import "./chunk-6ITDJ5UR.js";
|
|
41
|
+
import "./chunk-XYFDBYOY.js";
|
|
42
|
+
import "./chunk-TV74I3Y5.js";
|
|
43
|
+
import "./chunk-IH7ILDJS.js";
|
|
44
|
+
import "./chunk-LOZEKOES.js";
|
|
45
|
+
import "./chunk-TOU7EVFQ.js";
|
|
46
|
+
import "./chunk-OAWQ6LOO.js";
|
|
47
|
+
import "./chunk-SEEYV6P2.js";
|
|
48
|
+
import "./chunk-NDWTN4U5.js";
|
|
49
|
+
import "./chunk-OMR2DT66.js";
|
|
50
|
+
import "./chunk-HFNDKYVF.js";
|
|
51
|
+
export {
|
|
52
|
+
Matrix,
|
|
53
|
+
componentInit,
|
|
54
|
+
makeChartBtnMenu,
|
|
55
|
+
matrixInit
|
|
56
|
+
};
|
|
57
|
+
//# sourceMappingURL=matrix-3HFB5TUU.js.map
|