@sjcrh/proteinpaint-client 2.180.0 → 2.180.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/2dmaf-TA6JJ2OR.js +1371 -0
- package/dist/AIProjectAdmin-SAYM2UUO.js +830 -0
- package/dist/AppHeader-7TNVJJA7.js +833 -0
- package/dist/BoxPlot-IAROTQ5L.js +1184 -0
- package/dist/CorrelationVolcano-ZFSDE4PA.js +617 -0
- package/dist/DifferentialAnalysis-X44YRQNQ.js +238 -0
- package/dist/Disco-YI2INE5R.js +3199 -0
- package/dist/Disco-YI2INE5R.js.map +7 -0
- package/dist/Disco.UI-YWYNQSRV.js +242 -0
- package/dist/DmrPlot-5V5QL4VS.js +151 -0
- package/dist/GB-3P67R4TI.js +1125 -0
- package/dist/HicApp-GKI7GS7Y.js +2248 -0
- package/dist/NumBinaryEditor-FNIEMKOY.js +266 -0
- package/dist/NumBinaryEditor.unit.spec-CDHPXF7F.js +284 -0
- package/dist/NumContEditor-XICKQ4Y6.js +105 -0
- package/dist/NumContEditor.unit.spec-DVFH4SZT.js +167 -0
- package/dist/NumCustomBinEditor-ZMND7YMB.js +36 -0
- package/dist/NumCustomBinEditor.unit.spec-WLWD4FV2.js +282 -0
- package/dist/NumDiscreteEditor-H2GG4COK.js +170 -0
- package/dist/NumDiscreteEditor.unit.spec-OEREZ6HB.js +200 -0
- package/dist/NumRegularBinEditor-YGMQV7ZW.js +36 -0
- package/dist/NumRegularBinEditor.unit.spec-ZUTXFGGA.js +225 -0
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- package/dist/NumSplineEditor.unit.spec-IDEB3KAY.js +197 -0
- package/dist/NumericDensity-5DDVJBBW.js +36 -0
- package/dist/NumericDensity.unit.spec-KTOY3EON.js +219 -0
- package/dist/NumericHandler-XBY7A7TV.js +37 -0
- package/dist/NumericHandler.unit.spec-KKBJDLZY.js +217 -0
- package/dist/RunChart2-F4652KYJ.js +756 -0
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- package/dist/Volcano-ZHQFH2MP.js +1092 -0
- package/dist/WSIViewer-MU3YXF7I.js +46972 -0
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- package/dist/adSandbox-7FIAWUBA.js +36 -0
- package/dist/alphaGenome-ACWK2XZL.js +173 -0
- package/dist/app-6V52ULRQ.js +47 -0
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- package/dist/barchart-BKWC5UXM.js +45 -0
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- package/dist/barchart.events-ZJSQB3KV.js +45 -0
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- package/dist/block.mds.svcnv-C5HEGIAK.js +6799 -0
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- package/dist/block.tk.bedgraphdot-5ZBNIQFY.js +382 -0
- package/dist/block.tk.bigwig.ui-V2GLBUU5.js +209 -0
- package/dist/block.tk.hicstraw-3NJLYMEJ.js +821 -0
- package/dist/block.tk.junction-C4CAACOA.js +2362 -0
- package/dist/block.tk.junction.textmatrixui-NJCGCHZ5.js +197 -0
- package/dist/block.tk.ld-PNX72F42.js +97 -0
- package/dist/block.tk.menu-AZ44SBLU.js +1027 -0
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- package/dist/brainImaging-5DO3465Z.js +421 -0
- package/dist/chat-346IEKTC.js +147 -0
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- package/dist/chunk-3W2QIOL2.js +4202 -0
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- package/dist/databrowser.ui-EY4MYHIN.js +419 -0
- package/dist/dictionary-RXSFDNVZ.js +98 -0
- package/dist/dnaMethylation-LBLLHMD4.js +36 -0
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- /package/dist/{singleCellGeneExpression-QPVTXR5W.js.map → singleCellCellType-OLXPVJE6.js.map} +0 -0
- /package/dist/{singleCellCellType.unit.spec-BAIWJSUP.js.map → singleCellCellType.unit.spec-MQH6HMRC.js.map} +0 -0
- /package/dist/{singleCellPlot-T2YNDBTX.js.map → singleCellGeneExpression-P2K6EAGJ.js.map} +0 -0
- /package/dist/{singleCellGeneExpression.unit.spec-Q5TS6VB5.js.map → singleCellGeneExpression.unit.spec-LMCCDVIY.js.map} +0 -0
- /package/dist/{snp-DAIHQXTJ.js.map → singleCellPlot-CP5QDUSH.js.map} +0 -0
- /package/dist/{singlecell-PAOWCTF5.js.map → singlecell-57YOSKNP.js.map} +0 -0
- /package/dist/{singlecell-B3NERPJ5.js.map → singlecell-FGDYQAVM.js.map} +0 -0
- /package/dist/{ssGSEA-5H4QBOY2.js.map → snp-BYMKURQO.js.map} +0 -0
- /package/dist/{snp.unit.spec-MXTEPR3Z.js.map → snp.unit.spec-6UGQYGQR.js.map} +0 -0
- /package/dist/{snplocus-PMAVBMTK.js.map → snplocus-AYSJ7PSU.js.map} +0 -0
- /package/dist/{spliceevent.a53ss.diagram-G6W7EY3Q.js.map → spliceevent.a53ss.diagram-BB73A4HM.js.map} +0 -0
- /package/dist/{spliceevent.exonskip.diagram-YHUNDN4M.js.map → spliceevent.exonskip.diagram-VWIAD5DQ.js.map} +0 -0
- /package/dist/{spliceevent.noeventdiagram-FN3PORQA.js.map → spliceevent.noeventdiagram-QACCAJS4.js.map} +0 -0
- /package/dist/{summarizeMutationDiagnosis-OAUXQ6HD.js.map → ssGSEA-REHCYQ7Z.js.map} +0 -0
- /package/dist/{ssGSEA.unit.spec-UBZGATIZ.js.map → ssGSEA.unit.spec-XJNHMFF5.js.map} +0 -0
- /package/dist/{summarizeCnvGeneexp-IR7HMUG3.js.map → summarizeCnvGeneexp-NDEEB7PV.js.map} +0 -0
- /package/dist/{summarizeGeneexpSurvival-INZXCZ37.js.map → summarizeGeneexpSurvival-ZCGBEB4C.js.map} +0 -0
- /package/dist/{summarizeMutationCnv-GZFJTCRN.js.map → summarizeMutationCnv-OOMN2AVW.js.map} +0 -0
- /package/dist/{summary-SAVKS777.js.map → summarizeMutationDiagnosis-B6TF3KU5.js.map} +0 -0
- /package/dist/{summarizeMutationSurvival-PT2BGPWD.js.map → summarizeMutationSurvival-Y2J6T2CS.js.map} +0 -0
- /package/dist/{survival-65IBMTWU.js.map → summary-O5LSGPWD.js.map} +0 -0
- /package/dist/{summary.integration.spec-LWO7Y4OP.js.map → summary.integration.spec-EH7FMP7B.js.map} +0 -0
- /package/dist/{summaryInput-SEIB7F3A.js.map → summaryInput-ZWURF7E2.js.map} +0 -0
- /package/dist/{sunburst-HCF2V66V.js.map → sunburst-ZDE5Q2SJ.js.map} +0 -0
- /package/dist/{termCollection-GYMOT2EE.js.map → survival-DTUOFMGJ.js.map} +0 -0
- /package/dist/{survival-RIV2T7KO.js.map → survival-XKLFNJF2.js.map} +0 -0
- /package/dist/{survival.integration.spec-2V2O4H7K.js.map → survival.integration.spec-J352BAT4.js.map} +0 -0
- /package/dist/{svgraph-XV52FOMN.js.map → svgraph-NZQ6Z4HS.js.map} +0 -0
- /package/dist/{svmr-BDAHM7UH.js.map → svmr-BPDWKVL2.js.map} +0 -0
- /package/dist/{table-5N2CRI36.js.map → table-6FOITCXA.js.map} +0 -0
- /package/dist/{tk-IOJVJ34S.js.map → termCollection-HFDUSCPL.js.map} +0 -0
- /package/dist/{termCollection-TZY6DOSP.js.map → termCollection-SWYRSREU.js.map} +0 -0
- /package/dist/{termCollection.unit.spec-VWHQ72DD.js.map → termCollection.unit.spec-ZSAAQS26.js.map} +0 -0
- /package/dist/{tvs.density-AQ5GD437.js.map → tk-D2YVENB3.js.map} +0 -0
- /package/dist/{tp.ui-JHPHESWM.js.map → tp.ui-XALNLDLX.js.map} +0 -0
- /package/dist/{tvs.dt-JPB46UPH.js.map → tvs.density-HSVPDDGA.js.map} +0 -0
- /package/dist/{tvs.numeric-PLNP7MBV.js.map → tvs.dt-TOZ47QR3.js.map} +0 -0
- /package/dist/{tvs.dtcnv.categorical-37TA7GCY.js.map → tvs.dtcnv.categorical-OZFNQFCX.js.map} +0 -0
- /package/dist/{tvs.dtcnv.continuous-X4K3RPYG.js.map → tvs.dtcnv.continuous-XCZJ7JOD.js.map} +0 -0
- /package/dist/{tvs.dtfusion-77SKDRRH.js.map → tvs.dtfusion-G3BI6YSH.js.map} +0 -0
- /package/dist/{tvs.dtsnvindel-2QGQ455S.js.map → tvs.dtsnvindel-ETMWTQLL.js.map} +0 -0
- /package/dist/{tvs.dtsv-QBCE5IHM.js.map → tvs.dtsv-66AEHBQE.js.map} +0 -0
- /package/dist/{violin-DCKEHIVC.js.map → tvs.numeric-AU4U3UXI.js.map} +0 -0
- /package/dist/{tvs.samplelst-NRSYJ64L.js.map → tvs.samplelst-TMUNONJI.js.map} +0 -0
- /package/dist/{tvs.termCollection-BK36KZL2.js.map → tvs.termCollection-HZ2ZVONI.js.map} +0 -0
- /package/dist/{violin.interactivity-RS6D5YPY.js.map → violin-P4A4BLKJ.js.map} +0 -0
- /package/dist/{violin.integration.spec-IIYDX5DT.js.map → violin.integration.spec-DSSHXEES.js.map} +0 -0
- /package/dist/{violin.renderer-XIQTOVEK.js.map → violin.interactivity-FRXW7MH4.js.map} +0 -0
- /package/dist/{vocabulary-6437MWB6.js.map → violin.renderer-LQAFOSRK.js.map} +0 -0
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chartsInit,
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filterRxCompInit,
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getFilterItemByTag,
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groupsInit,
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renderTable,
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sayerror,
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to_textfile
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dofetch3
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select_default
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__toESM
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// mass/search.js
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var import_debounce = __toESM(require_debounce(), 1);
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var MassSearch = class _MassSearch {
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constructor(opts) {
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async init(appState) {
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getState(appState) {
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cohortStr: appState.activeCohort == -1 || !appState.termdbConfig.selectCohort ? "" : appState.termdbConfig.selectCohort.values[appState.activeCohort].keys.slice().sort().join(","),
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async doSearch(str) {
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}
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const data = await this.app.vocabApi.findTerm(str, this.state.cohortStr, this.opts.usecase, this.opts.targetType);
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self.dom.holder.style("display", self.search && self.search.isVisible == false ? "none" : "inline-block");
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self.dom.input = self.dom.holder.style("text-align", "center").append("input").attr("type", "search").attr("class", "tree_search").attr("placeholder", "Search").style("width", "180px").style("display", "block").on("input", (0, import_debounce.debounce)(self.onInput, 300));
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self.dom.resultDiv = self.dom.tip.d.style("border-left", self.opts.resultsHolder ? "" : "solid 1px rgb(133,182,225)").style("padding-left", "5px");
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self.noResult = () => {
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self.showTerms = (data) => {
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self.clear({ hide: !data.lst.length });
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self.showTerm = function(term) {
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config: {
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}
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tr.append("td").text((term.__ancestorNames || []).join(" > ")).style("opacity", 0.5).style("font-size", ".7em");
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};
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self.clear = (opts = {}) => {
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};
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}
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function setInteractivity(self) {
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self.onInput = async () => {
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const str = self.dom.input.property("value");
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try {
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} catch (e) {
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};
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}
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// mass/sessionBtn.js
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var MassSessionBtn = class _MassSessionBtn {
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static type = "sessionBtn";
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constructor() {
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this.type = _MassSessionBtn.type;
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this.route = "termdb";
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this.embedderOrigin = window.location.origin;
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this.hostURL = sessionStorage.getItem("hostURL") || this.embedderOrigin;
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}
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async init(appState) {
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const tip = new Menu({ padding: "0px" });
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const copytip = new Menu({ padding: "5px" });
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this.dom = {
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button: this.opts.button,
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tip,
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copytip
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};
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this.dom.button.on("click", () => {
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this.dom.tip.clear();
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this.showMenu();
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});
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this.dslabel = appState.vocab.dslabel;
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this.savedSessions = JSON.parse(localStorage.getItem("savedMassSessions") || `{}`);
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this.requiredAuth = appState.termdbConfig?.requiredAuth?.find((a) => a.route == this.route && a.type == "jwt");
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}
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async showMenu() {
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this.dom.tip.clear().d.style("padding", 0);
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const gt = `<span style='margin-left: 24px; float: right'>></span>`;
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const options = [
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{ label: `Open`, title: "Recover a saved session", callback: this.open },
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{ label: `Save`, title: "Save the current view", callback: this.save },
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{ label: `Share`, title: "Share the current view", callback: this.getSessionUrl }
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];
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if (!this.serverCachedSessions) await this.setServerCachedSessions();
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if (Object.keys(this.savedSessions).length || Object.keys(this.serverCachedSessions).length) {
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options.push({ label: `Delete`, title: "Delete a saved session", callback: this.delete });
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}
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this.dom.tip.clear().d.selectAll(".sja_menuoption sja_sharp_border").data(options).enter().append("div").attr("class", "sja_menuoption sja_sharp_border").attr("aria-label", (d) => d.title).html((d) => d.label).on("click", (event2, d) => {
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this.dom.tip.clear().d.style("padding", "10px");
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this.showBackBtn();
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d.callback.call(this);
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});
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this.dom.tip.showunder(this.dom.button.node());
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}
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async open() {
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+
const radioName = `sjpp-session-open-radio-` + Math.random().toString().slice(-6);
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198
|
+
this.dom.tip.d.append("div").style("display", "none").style("padding", "3px 9px").html(`
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199
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+
<b>Open in</b>
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<label>
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201
|
+
<input type='radio' name='${radioName}' value='new' style='margin-right: 0; vertical-align: bottom'/>
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202
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<span>a new tab</span>
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203
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</label>
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204
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<label style='margin-left: 5px'>
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<input type='radio' name='${radioName}' value='current' checked=checked style='margin-right: 0; vertical-align: bottom'/>
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206
|
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<span>current tab</span>
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207
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</label>
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208
|
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`);
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|
209
|
+
const t = await this.listSessions({
|
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210
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trClickHandler: async (event2, d) => {
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const { loc, id: id2 } = d;
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if (!id2) return;
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if (loc.includes("browser")) {
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this.sessionName = id2;
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215
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const state = structuredClone(this.savedSessions[id2]);
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216
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await preprocessState(state, this.app);
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217
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const targetWindow = this.dom.tip.d.node().querySelector(`[name="${radioName}"]:checked`).value;
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if (targetWindow == "current") {
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|
+
this.app.dispatch({ type: "app_refresh", state });
|
|
220
|
+
} else if (window.location.origin == this.hostURL) {
|
|
221
|
+
window.open(`/?mass-session-id=${id2}&src=browser`);
|
|
222
|
+
} else {
|
|
223
|
+
if (state.embedder) parentCorsMessage({ state });
|
|
224
|
+
else {
|
|
225
|
+
const { protocol, host, search, origin, href } = window.location;
|
|
226
|
+
const embedder = { protocol, host, search, origin, href };
|
|
227
|
+
parentCorsMessage({ state: Object.assign({ embedder }, state) });
|
|
228
|
+
}
|
|
229
|
+
}
|
|
230
|
+
this.dom.tip.hide();
|
|
231
|
+
} else if (loc == "server") {
|
|
232
|
+
const headers = await this.app.vocabApi.mayGetAuthHeaders(this.route);
|
|
233
|
+
const body = { id: id2, route: this.route, dslabel: this.dslabel, embedder: window.location.hostname };
|
|
234
|
+
const res = await dofetch3(`/massSession?`, { headers, body });
|
|
235
|
+
if (!res.state) throw res.error || "unable to get the cached session from the server";
|
|
236
|
+
await preprocessState(res.state, this.app);
|
|
237
|
+
this.savedSessions[id2] = res.state;
|
|
238
|
+
const targetWindow = this.dom.tip.d.node().querySelector(`[name="${radioName}"]:checked`).value;
|
|
239
|
+
if (targetWindow == "current") {
|
|
240
|
+
this.app.dispatch({ type: "app_refresh", state: res.state });
|
|
241
|
+
} else if (window.location.origin == this.hostURL) {
|
|
242
|
+
window.open(`/?mass-session-id=${id2}&src=cred&dslabel=${this.dslabel}&route=${this.route}`);
|
|
243
|
+
} else {
|
|
244
|
+
parentCorsMessage(res);
|
|
245
|
+
}
|
|
246
|
+
this.dom.tip.hide();
|
|
247
|
+
}
|
|
248
|
+
}
|
|
249
|
+
});
|
|
250
|
+
t.headtr.select("th").html("Open from");
|
|
251
|
+
const tr1 = t.tbody.insert("tr", "tr");
|
|
252
|
+
tr1.append("td").style("text-align", "center").style("padding", "3px 9px").html("Local file");
|
|
253
|
+
const label = tr1.append("td").style("text-align", "left").append("label");
|
|
254
|
+
label.append("span").style("padding", "3px 9px").style("text-decoration", "underline").style("cursor", "pointer").html("Choose File");
|
|
255
|
+
label.append("input").attr("type", "file").attr("placeholder", "file name").style("opacity", 0).style("width", "0.1px").style("height", "0.1px").style("position", "absolute").on("change", async () => {
|
|
256
|
+
const file = event.target.files.item(0);
|
|
257
|
+
const json = await file.text();
|
|
258
|
+
let sessionName = file.name;
|
|
259
|
+
if (this.savedSessions[sessionName]) {
|
|
260
|
+
sessionName = prompt(
|
|
261
|
+
`Leave as-is to overwrite a session with the same name, or enter a different session name.`,
|
|
262
|
+
sessionName
|
|
263
|
+
);
|
|
264
|
+
}
|
|
265
|
+
this.sessionName = sessionName;
|
|
266
|
+
const state = JSON.parse(json);
|
|
267
|
+
await preprocessState(state, this.app);
|
|
268
|
+
this.savedSessions[sessionName] = state;
|
|
269
|
+
localStorage.setItem("savedMassSessions", JSON.stringify(this.savedSessions));
|
|
270
|
+
const targetWindow = this.dom.tip.d.node().querySelector(`[name="${radioName}"]:checked`).value;
|
|
271
|
+
if (targetWindow == "current") {
|
|
272
|
+
this.app.dispatch({ type: "app_refresh", state });
|
|
273
|
+
} else if (window.location.origin == this.hostURL) {
|
|
274
|
+
window.open(`/?mass-session-id=${sessionName}&src=browser`);
|
|
275
|
+
} else {
|
|
276
|
+
if (state.embedder) parentCorsMessage({ state });
|
|
277
|
+
else {
|
|
278
|
+
const { protocol, host, search, origin, href } = window.location;
|
|
279
|
+
const embedder = { protocol, host, search, origin, href };
|
|
280
|
+
parentCorsMessage({ state: Object.assign({ embedder }, state) });
|
|
281
|
+
}
|
|
282
|
+
}
|
|
283
|
+
this.dom.tip.hide();
|
|
284
|
+
});
|
|
285
|
+
}
|
|
286
|
+
async listSessions(opts = {}) {
|
|
287
|
+
const table = this.dom.tip.d.append("table").attr("class", "sjpp-controls-table");
|
|
288
|
+
const headtr = table.append("thead").append("tr");
|
|
289
|
+
headtr.selectAll("th").data(["Cache Location", "Session ID"]).enter().append("th").style("text-align", (d, i) => i === 0 ? "center" : "left").style("padding", "3px 9px").html((d) => d);
|
|
290
|
+
const sessionIds = Object.keys(this.savedSessions).map((id2) => ({ loc: "browser", id: id2 }));
|
|
291
|
+
if (!this.serverCachedSessions) await this.setServerCachedSessions();
|
|
292
|
+
sessionIds.push(...this.serverCachedSessions.map((id2) => ({ loc: "server", id: id2 })));
|
|
293
|
+
const tbody = table.append("tbody");
|
|
294
|
+
const trs = tbody.selectAll("tr").data(sessionIds).enter().append("tr").on("click", opts.trClickHandler || null);
|
|
295
|
+
trs.selectAll("td").data((d) => [d, d]).enter().append("td").style("text-align", (d, i) => i === 0 ? "center" : "left").style("padding", "3px 9px").style("cursor", "pointer").html((d, i) => i === 0 ? d.loc : d.id);
|
|
296
|
+
if (!this.serverCachedSessions.length && this.requiredAuth && !this.app.vocabApi.hasVerifiedToken()) {
|
|
297
|
+
const tbody2 = table.append("tbody").append("tr").selectAll("td").data(["server", "requires sign-in"]).enter().append("td").style("text-align", (d, i) => i === 0 ? "center" : "left").style("padding", "3px 9px").html((d) => d);
|
|
298
|
+
}
|
|
299
|
+
return { table, headtr, tbody, trs };
|
|
300
|
+
}
|
|
301
|
+
async setServerCachedSessions() {
|
|
302
|
+
const state = this.app.getState();
|
|
303
|
+
this.requiredAuth = state.termdbConfig?.requiredAuth?.find((a) => a.route == this.route && a.type == "jwt");
|
|
304
|
+
if (!this.requiredAuth) {
|
|
305
|
+
this.serverCachedSessions = [];
|
|
306
|
+
return;
|
|
307
|
+
}
|
|
308
|
+
const headers = this.app.vocabApi.mayGetAuthHeaders(this.route);
|
|
309
|
+
const body = { route: this.route, dslabel: this.dslabel, embedder: window.location.hostname };
|
|
310
|
+
const res = await dofetch3("/sessionIds", { headers, body });
|
|
311
|
+
this.serverCachedSessions = res.sessionIds || [];
|
|
312
|
+
}
|
|
313
|
+
async save(d) {
|
|
314
|
+
const div = this.dom.tip.d;
|
|
315
|
+
const inputDiv = div.append("div");
|
|
316
|
+
inputDiv.append("span").html("Save as");
|
|
317
|
+
const sessionNames = Object.keys(this.savedSessions);
|
|
318
|
+
if (!this.serverCachedSessions) await this.setServerCachedSessions();
|
|
319
|
+
sessionNames.push(...this.serverCachedSessions.filter((d2) => !sessionNames.includes(d2)));
|
|
320
|
+
const placeholder = this.sessionName || "unnamed-session";
|
|
321
|
+
const input = inputDiv.append("input").attr("type", "text").attr("placeholder", placeholder).style("width", "220px").on("input", () => {
|
|
322
|
+
searchResultDiv.selectAll("*").remove();
|
|
323
|
+
const value = input.property("value");
|
|
324
|
+
const exactMatch = sessionNames.filter((s) => s === value);
|
|
325
|
+
const startsWith = sessionNames.filter((s) => s.startsWith(value));
|
|
326
|
+
const includes = sessionNames.filter((s) => s.includes(value) && s !== value && !startsWith.includes(s));
|
|
327
|
+
searchResultDiv.selectAll("div").data([...exactMatch, ...startsWith, ...includes]).enter().append("div").attr("class", "sja_menuoption").html((d2) => d2).on("click", (event2, d2) => {
|
|
328
|
+
input.property("value", d2);
|
|
329
|
+
searchResultDiv.selectAll("*").remove();
|
|
330
|
+
});
|
|
331
|
+
});
|
|
332
|
+
const searchResultDiv = div.append("div");
|
|
333
|
+
const submitDiv = div.append("div");
|
|
334
|
+
submitDiv.append("span").html("Save to ");
|
|
335
|
+
submitDiv.append("button").style("min-width", "80px").html("Browser").attr(
|
|
336
|
+
"title",
|
|
337
|
+
`Save the session in your current browser's cache. The session can be easily recovered, but not shared among your other devices`
|
|
338
|
+
).on("click", () => {
|
|
339
|
+
this.sessionName = input.property("value") || placeholder;
|
|
340
|
+
this.savedSessions[this.sessionName] = this.app.getState();
|
|
341
|
+
localStorage.setItem("savedMassSessions", JSON.stringify(this.savedSessions));
|
|
342
|
+
this.confirmAction(`Cached '<b>${this.sessionName}</b>' in browser`);
|
|
343
|
+
});
|
|
344
|
+
submitDiv.append("button").style("min-width", "80px").html("File").attr(
|
|
345
|
+
"title",
|
|
346
|
+
`Save the session into a local file. The session can be easily recoved using the 'Open from local file' option.`
|
|
347
|
+
).on("click", () => {
|
|
348
|
+
const name = input.property("value") || placeholder;
|
|
349
|
+
this.savedSessions[name] = this.app.getState();
|
|
350
|
+
this.download(name);
|
|
351
|
+
this.confirmAction(`Downloaded '<b>${name}</b>'`);
|
|
352
|
+
});
|
|
353
|
+
if (this.requiredAuth) {
|
|
354
|
+
const requiresSignIn = this.app.vocabApi.hasVerifiedToken() ? "" : "Requires sign-in. ";
|
|
355
|
+
submitDiv.append("button").style("min-width", "80px").html("Server").attr(
|
|
356
|
+
"title",
|
|
357
|
+
`${requiresSignIn}Save the session into a remote server. The session can be easily shared across your different devices and recovered using the 'Open from server' option.`
|
|
358
|
+
).property("disabled", !this.app.vocabApi.hasVerifiedToken()).on("click", async () => {
|
|
359
|
+
if (!this.app.vocabApi.hasVerifiedToken()) {
|
|
360
|
+
alert("Requires sign-in");
|
|
361
|
+
return;
|
|
362
|
+
}
|
|
363
|
+
const name = input.property("value") || placeholder;
|
|
364
|
+
this.savedSessions[name] = this.app.getState();
|
|
365
|
+
const res = await this.getSessionUrl(name);
|
|
366
|
+
if (res.id != name) throw `error saving ${name}`;
|
|
367
|
+
this.confirmAction(`Saved '<b>${name}</b>' on the server`);
|
|
368
|
+
});
|
|
369
|
+
}
|
|
370
|
+
}
|
|
371
|
+
download(name = "") {
|
|
372
|
+
const sessionName = name || this.sessionName;
|
|
373
|
+
const ext = sessionName?.endsWith(".txt") ? "" : ".txt";
|
|
374
|
+
const filename = `${sessionName}${ext}`;
|
|
375
|
+
to_textfile(filename, JSON.stringify(this.savedSessions[sessionName]));
|
|
376
|
+
}
|
|
377
|
+
async getSessionUrl(filename = "") {
|
|
378
|
+
const headers = await this.app.vocabApi.mayGetAuthHeaders("termdb");
|
|
379
|
+
const state = structuredClone(this.app.getState());
|
|
380
|
+
const { protocol, host, search, origin, href } = window.location;
|
|
381
|
+
state.embedder = { protocol, host, search, origin, href };
|
|
382
|
+
if (filename) {
|
|
383
|
+
state.__sessionFor__ = {
|
|
384
|
+
route: this.route,
|
|
385
|
+
filename,
|
|
386
|
+
dslabel: this.dslabel,
|
|
387
|
+
embedder: window.location.hostname
|
|
388
|
+
};
|
|
389
|
+
}
|
|
390
|
+
const res = await dofetch3("/massSession", {
|
|
391
|
+
headers,
|
|
392
|
+
method: "POST",
|
|
393
|
+
body: JSON.stringify(state)
|
|
394
|
+
});
|
|
395
|
+
if (filename) {
|
|
396
|
+
return res;
|
|
397
|
+
} else {
|
|
398
|
+
const url = `${this.hostURL}/?mass-session-id=${res.id}&noheader=1`;
|
|
399
|
+
this.dom.tip.showunder(this.dom.button.node());
|
|
400
|
+
const linkDiv = this.dom.tip.d.append("div").style("margin", "10px");
|
|
401
|
+
linkDiv.append("div").style("display", "flex").style("margin-bottom", "12px").html(`Open or copy the session link.`);
|
|
402
|
+
const a = linkDiv.append("a").style("display", "none").attr("href", url).attr("target", "_blank").html(res.id);
|
|
403
|
+
linkDiv.append("button").style("cursor", "pointer").text("Open link").on("click", () => {
|
|
404
|
+
a.node().click();
|
|
405
|
+
});
|
|
406
|
+
linkDiv.append("button").style("cursor", "pointer").style("margin-left", "10px").text("Copy link").on("click", async (event2) => {
|
|
407
|
+
await navigator.clipboard.writeText(url);
|
|
408
|
+
this.dom.copytip.clear().showunder(event2.target);
|
|
409
|
+
this.dom.copytip.d.append("div").html("✓");
|
|
410
|
+
setTimeout(() => {
|
|
411
|
+
this.dom.copytip.hide();
|
|
412
|
+
}, 1e3);
|
|
413
|
+
});
|
|
414
|
+
if (this.hostURL != window.location.origin) {
|
|
415
|
+
a.on("click", (event2) => {
|
|
416
|
+
event2.preventDefault();
|
|
417
|
+
parentCorsMessage({ state }, "noredirect");
|
|
418
|
+
return false;
|
|
419
|
+
});
|
|
420
|
+
}
|
|
421
|
+
linkDiv.append("div").html(`
|
|
422
|
+
<br>
|
|
423
|
+
<div style="max-width: 400px; font-size: 1em; opacity:.6">
|
|
424
|
+
<span>NOTES</span>
|
|
425
|
+
<ul>
|
|
426
|
+
<li>A recovered session may hide data or views to users that are not authorized to access the saved datasets or features.</li>
|
|
427
|
+
<li>This session will be saved for ${this.opts.massSessionDuration} days.</li>
|
|
428
|
+
</ul>
|
|
429
|
+
</div>`);
|
|
430
|
+
setTimeout(() => {
|
|
431
|
+
this.dom.button.property("disabled", false);
|
|
432
|
+
}, 1e3);
|
|
433
|
+
}
|
|
434
|
+
}
|
|
435
|
+
async delete() {
|
|
436
|
+
const t = await this.listSessions({
|
|
437
|
+
trClickHandler: function(event2) {
|
|
438
|
+
const input = this.lastChild.querySelector("input");
|
|
439
|
+
const checked = event2.target == input ? input.checked : !input.checked;
|
|
440
|
+
select_default(this).style("text-decoration", checked ? "line-through" : "");
|
|
441
|
+
if (event2.target != input) input.checked = checked;
|
|
442
|
+
const checkedRows = t.table.node().querySelectorAll("input:checked");
|
|
443
|
+
submitBtn.property("disabled", checkedRows.length ? false : true);
|
|
444
|
+
}
|
|
445
|
+
});
|
|
446
|
+
t.headtr.append("th").html("Delete");
|
|
447
|
+
t.trs.each(function(d) {
|
|
448
|
+
select_default(this).append("td").style("text-align", "center").append("input").attr("type", "checkbox").attr("value", d.id);
|
|
449
|
+
});
|
|
450
|
+
const submitBtn = this.dom.tip.d.append("div").style("text-align", "center").append("button").html("Delete selected sessions").property("disabled", true).on("click", async () => {
|
|
451
|
+
const inputs = t.table.node().querySelectorAll("input");
|
|
452
|
+
const sessionIdsDeletedFromServer = [];
|
|
453
|
+
for (const input of inputs) {
|
|
454
|
+
if (select_default(input).property("checked")) {
|
|
455
|
+
const d = input.parentNode.parentNode.__data__;
|
|
456
|
+
if (d.loc == "browser") {
|
|
457
|
+
delete this.savedSessions[input.value];
|
|
458
|
+
} else if (d.loc == "server") {
|
|
459
|
+
delete this.serverCachedSessions[input.value];
|
|
460
|
+
sessionIdsDeletedFromServer.push(input.value);
|
|
461
|
+
} else throw `unknown cache location=${d.loc}`;
|
|
462
|
+
}
|
|
463
|
+
}
|
|
464
|
+
localStorage.setItem("savedMassSessions", JSON.stringify(this.savedSessions));
|
|
465
|
+
try {
|
|
466
|
+
const headers = await this.app.vocabApi.mayGetAuthHeaders("termdb");
|
|
467
|
+
const body = {
|
|
468
|
+
ids: sessionIdsDeletedFromServer,
|
|
469
|
+
route: this.route,
|
|
470
|
+
dslabel: this.dslabel,
|
|
471
|
+
embedder: window.location.hostname
|
|
472
|
+
};
|
|
473
|
+
const res = dofetch3(`/massSession?`, { method: "DELETE", headers, body });
|
|
474
|
+
} catch (e) {
|
|
475
|
+
throw e;
|
|
476
|
+
}
|
|
477
|
+
this.dom.tip.hide();
|
|
478
|
+
});
|
|
479
|
+
}
|
|
480
|
+
showBackBtn() {
|
|
481
|
+
this.dom.tip.d.append("div").attr("class", "sja_clbtext2").style("margin-bottom", "10px").style("cursor", "pointer").html(`< Session Menu`).on("click", () => this.showMenu());
|
|
482
|
+
}
|
|
483
|
+
confirmAction(html) {
|
|
484
|
+
this.dom.tip.clear().d.append("div").html(html).transition().delay(3e3).duration(1e3).style("opacity", 0);
|
|
485
|
+
setTimeout(() => {
|
|
486
|
+
this.dom.tip.hide();
|
|
487
|
+
}, 3500);
|
|
488
|
+
}
|
|
489
|
+
};
|
|
490
|
+
async function preprocessState(state, app) {
|
|
491
|
+
delete state.termdbConfig;
|
|
492
|
+
if (state.plots) {
|
|
493
|
+
const promises = [];
|
|
494
|
+
for (const plot of state.plots) {
|
|
495
|
+
promises.push(
|
|
496
|
+
(async () => {
|
|
497
|
+
const _ = await importPlot(plot.chartType);
|
|
498
|
+
return await _.getPlotConfig(plot, app);
|
|
499
|
+
})()
|
|
500
|
+
);
|
|
501
|
+
}
|
|
502
|
+
try {
|
|
503
|
+
await Promise.all(promises);
|
|
504
|
+
} catch (e) {
|
|
505
|
+
console.log(e);
|
|
506
|
+
app.printError(e);
|
|
507
|
+
}
|
|
508
|
+
}
|
|
509
|
+
}
|
|
510
|
+
var sessionBtnInit = getCompInit(MassSessionBtn);
|
|
511
|
+
|
|
512
|
+
// mass/about.ts
|
|
513
|
+
var cohortTableActiveColor = "yellow";
|
|
514
|
+
var MassAbout = class _MassAbout {
|
|
515
|
+
constructor(opts) {
|
|
516
|
+
this.initCohort = (appState) => {
|
|
517
|
+
if (this.selectCohort == null) return;
|
|
518
|
+
if (!this.selectCohort.values) return;
|
|
519
|
+
const instanceNum2 = this.instanceNum;
|
|
520
|
+
const activeCohort = appState.activeCohort;
|
|
521
|
+
const app = this.app;
|
|
522
|
+
this.dom.cohortOpts.append("table").selectAll("tr").data(this.selectCohort.values).enter().append("tr").each(function(d, i, nodes) {
|
|
523
|
+
const tr = select_default(nodes[i]);
|
|
524
|
+
const td0 = tr.append("td");
|
|
525
|
+
const radioName = "sja-termdb-cohort-" + instanceNum2;
|
|
526
|
+
const radioId = radioName + "-" + i;
|
|
527
|
+
td0.append("input").style("scale", "1.2").attr("type", "radio").attr("name", radioName).attr("id", radioId).attr("value", i).property("checked", i === activeCohort).style("margin-right", "5px").style("margin-left", "0px").on("click", async (event2) => {
|
|
528
|
+
const state = app.getState();
|
|
529
|
+
const clearOnChange = state.termdbConfig.selectCohort.clearOnChange;
|
|
530
|
+
if (clearOnChange) {
|
|
531
|
+
const subactions = [];
|
|
532
|
+
const toBeCleared = [];
|
|
533
|
+
const plots = state.plots;
|
|
534
|
+
const filter = state.termfilter.filter.lst.find((f) => f.tag == "filterUiRoot")?.lst;
|
|
535
|
+
const groups = state.groups;
|
|
536
|
+
if (clearOnChange.plots && plots?.length) toBeCleared.push("plots");
|
|
537
|
+
for (const plot of plots) {
|
|
538
|
+
subactions.push({
|
|
539
|
+
type: "plot_delete",
|
|
540
|
+
id: plot.id
|
|
541
|
+
});
|
|
542
|
+
}
|
|
543
|
+
if (clearOnChange.filter && filter?.length) toBeCleared.push("filters");
|
|
544
|
+
subactions.push({
|
|
545
|
+
type: "filter_replace",
|
|
546
|
+
filter: {
|
|
547
|
+
type: "tvslst",
|
|
548
|
+
in: true,
|
|
549
|
+
join: "",
|
|
550
|
+
tag: "filterUiRoot",
|
|
551
|
+
lst: []
|
|
552
|
+
}
|
|
553
|
+
});
|
|
554
|
+
if (clearOnChange.groups && groups?.length) {
|
|
555
|
+
toBeCleared.push("groups");
|
|
556
|
+
for (const group of groups) {
|
|
557
|
+
subactions.push({
|
|
558
|
+
type: "delete_group",
|
|
559
|
+
name: group.name
|
|
560
|
+
});
|
|
561
|
+
}
|
|
562
|
+
for (const term of state.customTerms) {
|
|
563
|
+
subactions.push({
|
|
564
|
+
type: "delete_customTerm",
|
|
565
|
+
name: term.name
|
|
566
|
+
});
|
|
567
|
+
}
|
|
568
|
+
}
|
|
569
|
+
subactions.push({ type: "cohort_set", activeCohort: i });
|
|
570
|
+
if (toBeCleared.length) {
|
|
571
|
+
const confirm = window.confirm(
|
|
572
|
+
`Changing the cohort will clear all ${joinByComma(
|
|
573
|
+
toBeCleared
|
|
574
|
+
)}. To proceed, click "OK". To save the session, click "Cancel" and then click the "Session" button at the top of the page.`
|
|
575
|
+
);
|
|
576
|
+
if (!confirm) {
|
|
577
|
+
event2.preventDefault();
|
|
578
|
+
return;
|
|
579
|
+
}
|
|
580
|
+
}
|
|
581
|
+
app.dispatch({
|
|
582
|
+
type: "app_refresh",
|
|
583
|
+
subactions
|
|
584
|
+
});
|
|
585
|
+
} else app.dispatch({ type: "cohort_set", activeCohort: i });
|
|
586
|
+
});
|
|
587
|
+
td0.append("label").style("font-size", "1.4em").attr("for", radioId).attr("colspan", 2).style("cursor", "pointer").html((d2) => d2.label);
|
|
588
|
+
tr.selectAll("td").style("max-width", "600px").style("padding-bottom", "10px").style("padding-right", "20px").style("vertical-align", "top");
|
|
589
|
+
});
|
|
590
|
+
this.dom.cohortTable = this.subheader.append("div").style("margin-left", "12px");
|
|
591
|
+
if (this.selectCohort.asterisk) {
|
|
592
|
+
this.dom.cohortAsterisk = this.subheader.append("div").style("margin", "10px").style("font-size", ".8em").text(this.selectCohort.asterisk);
|
|
593
|
+
}
|
|
594
|
+
};
|
|
595
|
+
this.renderCohortsTable = async () => {
|
|
596
|
+
if (!this.dom.cohortTable) return;
|
|
597
|
+
this.dom.cohortTable.selectAll("*").remove();
|
|
598
|
+
const columns = [{ label: "Feature" }];
|
|
599
|
+
const rows = [];
|
|
600
|
+
const result = await this.app.vocabApi.getCohortsData();
|
|
601
|
+
if ("error" in result) throw result.error;
|
|
602
|
+
if (this.selectCohort?.values) {
|
|
603
|
+
const values = this.selectCohort.values;
|
|
604
|
+
result.cohorts.sort((a, b) => {
|
|
605
|
+
const aIndex = values.findIndex((v) => v.keys.toString() == a.cohort);
|
|
606
|
+
const bIndex = values.findIndex((v) => v.keys.toString() == b.cohort);
|
|
607
|
+
if (aIndex < bIndex) return -1;
|
|
608
|
+
if (aIndex > bIndex) return 1;
|
|
609
|
+
return 0;
|
|
610
|
+
});
|
|
611
|
+
}
|
|
612
|
+
if (!result.cfeatures.length) return;
|
|
613
|
+
for (const feature of result.features) rows.push([{ value: feature.name }]);
|
|
614
|
+
for (const cohort of result.cohorts) {
|
|
615
|
+
if (cohort.subcohorts?.length) continue;
|
|
616
|
+
columns.push({ label: cohort.name });
|
|
617
|
+
for (const [i, feature] of result.features.entries()) {
|
|
618
|
+
const cf = result.cfeatures.find((cf2) => cf2.idfeature === feature.idfeature && cf2.cohort === cohort.cohort);
|
|
619
|
+
if (cf) rows[i].push({ value: cf.value });
|
|
620
|
+
}
|
|
621
|
+
}
|
|
622
|
+
renderTable({
|
|
623
|
+
rows,
|
|
624
|
+
columns,
|
|
625
|
+
div: this.dom.cohortTable,
|
|
626
|
+
showLines: false,
|
|
627
|
+
maxHeight: "60vh",
|
|
628
|
+
header: { style: { "font-size": "1.2em", "font-weight": "bold" } }
|
|
629
|
+
});
|
|
630
|
+
this.dom.cohortTable.select("table").style("border-collapse", "collapse");
|
|
631
|
+
this.dom.cohortTable.selectAll(`tbody > tr > td`).style("background-color", "transparent").style("padding", "6px");
|
|
632
|
+
const state = this.app.getState();
|
|
633
|
+
const selectCohort = state.termdbConfig.selectCohort;
|
|
634
|
+
const activeCohort = state.activeCohort;
|
|
635
|
+
const keys = selectCohort.values[activeCohort].keys;
|
|
636
|
+
let selector = `tbody > tr > td:nth-child(${activeCohort + 2})`;
|
|
637
|
+
const combined = keys.length > 1;
|
|
638
|
+
if (combined) {
|
|
639
|
+
selector = "";
|
|
640
|
+
for (const key of keys) {
|
|
641
|
+
const i = result.cohorts.map((c) => c.cohort).indexOf(key);
|
|
642
|
+
if (selector !== "") selector += ",";
|
|
643
|
+
selector += `tbody > tr > td:nth-child(${i + 2})`;
|
|
644
|
+
}
|
|
645
|
+
}
|
|
646
|
+
const activeColumns = this.dom.cohortTable.selectAll(selector);
|
|
647
|
+
const color = state.termdbConfig.massNav?.activeColor || cohortTableActiveColor;
|
|
648
|
+
activeColumns.style("background-color", color);
|
|
649
|
+
};
|
|
650
|
+
this.initCustomHtml = () => {
|
|
651
|
+
if (this.selectCohort != null) return;
|
|
652
|
+
if (!this.aboutOverrides?.html) return;
|
|
653
|
+
this.subheader.append("div").attr("data-testid", "sjpp-custom-about-content").style("padding", "10px").html(this.aboutOverrides.html);
|
|
654
|
+
};
|
|
655
|
+
this.initActiveItems = () => {
|
|
656
|
+
if (!this.aboutOverrides?.activeItems) return;
|
|
657
|
+
const div = this.subheader.append("div").attr("data-testid", "sjpp-custom-about-activeItems").style("padding", "0px 0px 20px 20px");
|
|
658
|
+
for (const item of this.aboutOverrides.activeItems.items) {
|
|
659
|
+
div.append("div").style("display", "inline-block").style("margin", "5px").attr("class", "sja_menuoption").attr("data-testid", "sjpp-custom-active-item-btn").html(item.title).on("click", async () => {
|
|
660
|
+
await this.app.dispatch({
|
|
661
|
+
type: "tab_set",
|
|
662
|
+
activeTab: 1
|
|
663
|
+
});
|
|
664
|
+
this.app.dispatch({
|
|
665
|
+
type: "plot_create",
|
|
666
|
+
id: getId(),
|
|
667
|
+
config: structuredClone(item.plot)
|
|
668
|
+
});
|
|
669
|
+
});
|
|
670
|
+
}
|
|
671
|
+
};
|
|
672
|
+
this.showServerInfo = () => {
|
|
673
|
+
const state = this.app.getState();
|
|
674
|
+
const about = state.termdbConfig.massNav?.tabs?.about;
|
|
675
|
+
if (!about && !this.app.opts.pkgver && !this.app.opts.launchDate) return;
|
|
676
|
+
const dataRelease = about?.dataRelease;
|
|
677
|
+
const additionalInfo = about?.additionalInfo;
|
|
678
|
+
const div = this.subheader.append("div").attr("data-testid", "sjpp-about-server-info").style("margin", "10px").style("font-size", ".8em");
|
|
679
|
+
const htmlArr = [];
|
|
680
|
+
if (dataRelease) {
|
|
681
|
+
htmlArr.push(`Data Release: <a href=${dataRelease.link} target=_blank>${dataRelease.version}</a>`);
|
|
682
|
+
}
|
|
683
|
+
if (this.app.opts.pkgver) {
|
|
684
|
+
htmlArr.push(
|
|
685
|
+
`Software Release: <a href=https://github.com/stjude/proteinpaint/pkgs/container/ppfull target=_blank>${this.app.opts.pkgver}</a>`
|
|
686
|
+
);
|
|
687
|
+
}
|
|
688
|
+
if (this.app.opts.launchDate) {
|
|
689
|
+
htmlArr.push(`Server Launched: ${this.app.opts.launchDate}`);
|
|
690
|
+
}
|
|
691
|
+
if (additionalInfo) {
|
|
692
|
+
htmlArr.push(additionalInfo);
|
|
693
|
+
}
|
|
694
|
+
div.append("div").html(htmlArr.join("; "));
|
|
695
|
+
};
|
|
696
|
+
this.opts = opts;
|
|
697
|
+
this.type = _MassAbout.type;
|
|
698
|
+
this.app = opts.app;
|
|
699
|
+
this.subheader = opts.subheader;
|
|
700
|
+
this.instanceNum = opts.instanceNum;
|
|
701
|
+
this.aboutOverrides = opts.aboutOverrides;
|
|
702
|
+
this.selectCohort = opts.selectCohort;
|
|
703
|
+
this.dom = {
|
|
704
|
+
cohortDescription: this.subheader.append("div").attr("data-testid", "sjpp-about-cohort-desc").style("margin-left", "10px")
|
|
705
|
+
};
|
|
706
|
+
if (opts?.selectCohort?.title) {
|
|
707
|
+
this.dom.cohortTitle = opts.subheader.append("h2").style("margin-left", "10px").text(opts.selectCohort.title);
|
|
708
|
+
}
|
|
709
|
+
if (opts.selectCohort?.prompt) {
|
|
710
|
+
this.dom.cohortPrompt = this.subheader.append("div").style("margin-left", "10px").style("padding-top", "30px").style("padding-bottom", "10px").style("font-weight", "bold").style("font-size", "1.2em").text(opts.selectCohort.prompt);
|
|
711
|
+
}
|
|
712
|
+
if (opts.selectCohort) {
|
|
713
|
+
this.dom.cohortOpts = this.subheader.append("div").style("margin-bottom", "30px").style("margin-left", "10px");
|
|
714
|
+
}
|
|
715
|
+
}
|
|
716
|
+
static {
|
|
717
|
+
this.type = "about";
|
|
718
|
+
}
|
|
719
|
+
/* render all contents into this.subheader
|
|
720
|
+
do it through init() means that contents are rendered just once on launching mass ui and won't be rerendered or updated
|
|
721
|
+
since there's no reason to update about tab contents while user is interacting with mass ui
|
|
722
|
+
*/
|
|
723
|
+
init(appState) {
|
|
724
|
+
this.initCohort(appState);
|
|
725
|
+
this.initCustomHtml();
|
|
726
|
+
this.initActiveItems();
|
|
727
|
+
this.showServerInfo();
|
|
728
|
+
}
|
|
729
|
+
async main() {
|
|
730
|
+
if (this.state.nav.activeTab !== 0) return;
|
|
731
|
+
await this.renderCohortsTable();
|
|
732
|
+
if (this.opts.selectCohort) {
|
|
733
|
+
if (this.opts.selectCohort.description) {
|
|
734
|
+
this.dom.cohortDescription.html(this.opts.selectCohort.description);
|
|
735
|
+
} else if (this.opts.selectCohort.descriptionByCohort) {
|
|
736
|
+
this.dom.cohortDescription.html(
|
|
737
|
+
this.opts.selectCohort.descriptionByCohort[this.state.termdbConfig.selectCohort.values[this.state.activeCohort].keys.join(",")]
|
|
738
|
+
);
|
|
739
|
+
}
|
|
740
|
+
}
|
|
741
|
+
}
|
|
742
|
+
};
|
|
743
|
+
var aboutInit = getCompInit(MassAbout);
|
|
744
|
+
function joinByComma(arr) {
|
|
745
|
+
if (!arr.length) return "";
|
|
746
|
+
else if (arr.length == 1) return arr[0];
|
|
747
|
+
else if (arr.length == 2) return arr.join(" and ");
|
|
748
|
+
else return `${arr.slice(0, -1).join(", ")}, and ${arr.slice(-1)}`;
|
|
749
|
+
}
|
|
750
|
+
|
|
751
|
+
// mass/nav.js
|
|
752
|
+
var activeTabBgColor = "#ececec";
|
|
753
|
+
var activeTabBgColorHover = "#e0e0e0";
|
|
754
|
+
var activeTabTextColor = "black";
|
|
755
|
+
var inactiveTabBgColorHover = "#fcfced";
|
|
756
|
+
var inactiveTabTextColor = "gray";
|
|
757
|
+
var instanceNum = 0;
|
|
758
|
+
var idPrefix = "_MASS_AUTOID_" + Math.random().toString().slice(-6);
|
|
759
|
+
var id = (+/* @__PURE__ */ new Date()).toString().slice(-8);
|
|
760
|
+
var headtip = new Menu({ padding: "0px", offsetX: 0, offsetY: 0 });
|
|
761
|
+
headtip.d.style("z-index", 5555);
|
|
762
|
+
var aboutTab = { top: "ABOUT", mid: "", btm: "", subheader: "about" };
|
|
763
|
+
var chartTab = { top: "CHARTS", mid: "NONE", btm: "", subheader: "charts" };
|
|
764
|
+
var groupsTab = { top: "GROUPS", mid: "NONE", btm: "", subheader: "groups" };
|
|
765
|
+
var filterTab = { top: "FILTER", mid: "NONE", btm: "", subheader: "filter" };
|
|
766
|
+
function getId() {
|
|
767
|
+
return idPrefix + "_" + id++;
|
|
768
|
+
}
|
|
769
|
+
var TdbNav = class _TdbNav {
|
|
770
|
+
static type = "nav";
|
|
771
|
+
constructor(opts) {
|
|
772
|
+
this.type = _TdbNav.type;
|
|
773
|
+
this.instanceNum = instanceNum++;
|
|
774
|
+
this.tabs = [];
|
|
775
|
+
this.activeTab = 0;
|
|
776
|
+
this.activeCohort = 0;
|
|
777
|
+
this.samplecounts = {};
|
|
778
|
+
this.searching = false;
|
|
779
|
+
this.massSessionDuration = opts.massSessionDuration;
|
|
780
|
+
this.sessionDaysLeft = opts.app.opts.sessionDaysLeft || null;
|
|
781
|
+
this.sessionId = opts.app.opts.sessionId || null;
|
|
782
|
+
this.pkgver = opts.pkgver || null;
|
|
783
|
+
setInteractivity2(this);
|
|
784
|
+
setRenderers2(this);
|
|
785
|
+
}
|
|
786
|
+
async init(appState) {
|
|
787
|
+
try {
|
|
788
|
+
this.cohortFilter = getFilterItemByTag(appState.termfilter.filter, "cohortFilter");
|
|
789
|
+
this.initUI(appState);
|
|
790
|
+
if (appState?.termdbConfig?.selectCohort) {
|
|
791
|
+
this.dom.tds.filter((d) => d.colNum === 0).style("display", "");
|
|
792
|
+
this.cohortNames = appState.termdbConfig.selectCohort.values.map((d) => d.keys.slice().sort().join(","));
|
|
793
|
+
}
|
|
794
|
+
this.components = await multiInit({
|
|
795
|
+
search: searchInit({
|
|
796
|
+
app: this.app,
|
|
797
|
+
holder: this.dom.searchDiv,
|
|
798
|
+
usecase: { target: "summary", detail: "term" },
|
|
799
|
+
targetType: "Dictionary Variables"
|
|
800
|
+
}),
|
|
801
|
+
filter: filterRxCompInit({
|
|
802
|
+
app: this.app,
|
|
803
|
+
vocabApi: this.app.vocabApi,
|
|
804
|
+
holder: this.dom.subheader.filter.append("div").style("margin", "5px"),
|
|
805
|
+
hideLabel: this.opts.header_mode === "with_tabs",
|
|
806
|
+
emptyLabel: "+Add new filter",
|
|
807
|
+
callback: (filter) => {
|
|
808
|
+
this.app.dispatch({
|
|
809
|
+
type: "filter_replace",
|
|
810
|
+
filter
|
|
811
|
+
});
|
|
812
|
+
}
|
|
813
|
+
}),
|
|
814
|
+
charts: chartsInit({
|
|
815
|
+
app: this.app,
|
|
816
|
+
holder: this.dom.subheader.charts,
|
|
817
|
+
vocab: this.opts.vocab
|
|
818
|
+
}),
|
|
819
|
+
groups: groupsInit({
|
|
820
|
+
app: this.app,
|
|
821
|
+
holder: this.dom.subheader.groups,
|
|
822
|
+
vocab: this.opts.vocab
|
|
823
|
+
}),
|
|
824
|
+
recover: recoverInit({
|
|
825
|
+
app: this.app,
|
|
826
|
+
holder: this.dom.recoverDiv,
|
|
827
|
+
// TODO: ???? may limit the tracked state to only the filter, activeCohort ???
|
|
828
|
+
getState: (appState2) => appState2,
|
|
829
|
+
reactsTo: (action) => action.type != "plot_edit",
|
|
830
|
+
maxHistoryLen: 5
|
|
831
|
+
}),
|
|
832
|
+
sessionBtn: sessionBtnInit({
|
|
833
|
+
app: this.app,
|
|
834
|
+
button: this.dom.saveBtn,
|
|
835
|
+
massSessionDuration: this.opts.massSessionDuration,
|
|
836
|
+
sessionDaysLeft: this.app.opts.sessionDaysLeft || null
|
|
837
|
+
}),
|
|
838
|
+
about: aboutInit({
|
|
839
|
+
app: this.app,
|
|
840
|
+
subheader: this.dom.subheader.about,
|
|
841
|
+
instanceNum: this.instanceNum,
|
|
842
|
+
aboutOverrides: appState?.termdbConfig?.massNav?.tabs?.about || null,
|
|
843
|
+
selectCohort: appState?.termdbConfig?.selectCohort || null
|
|
844
|
+
})
|
|
845
|
+
});
|
|
846
|
+
this.mayShowMessage_sessionDaysLeft();
|
|
847
|
+
} catch (e) {
|
|
848
|
+
throw e;
|
|
849
|
+
}
|
|
850
|
+
}
|
|
851
|
+
reactsTo(action) {
|
|
852
|
+
if (action.type.includes("cache_termq")) return true;
|
|
853
|
+
if (action.type.startsWith("filter")) return true;
|
|
854
|
+
if (action.type.startsWith("cohort")) return true;
|
|
855
|
+
if (action.type.startsWith("tab")) return true;
|
|
856
|
+
if (action.type == "plot_prep") return true;
|
|
857
|
+
if (action.type == "plot_create") return true;
|
|
858
|
+
if (action.type == "plot_delete") return true;
|
|
859
|
+
if (action.type == "app_refresh") return true;
|
|
860
|
+
if (action.type.endsWith("_customTerm")) return true;
|
|
861
|
+
if (action.type.endsWith("_group")) return true;
|
|
862
|
+
}
|
|
863
|
+
getState(appState) {
|
|
864
|
+
return {
|
|
865
|
+
searching: this.searching,
|
|
866
|
+
// for detection of internal state change
|
|
867
|
+
nav: appState.nav,
|
|
868
|
+
activeCohort: appState.activeCohort,
|
|
869
|
+
termdbConfig: appState.termdbConfig,
|
|
870
|
+
filter: appState.termfilter.filter,
|
|
871
|
+
plots: appState.plots,
|
|
872
|
+
groups: appState.groups
|
|
873
|
+
};
|
|
874
|
+
}
|
|
875
|
+
async main() {
|
|
876
|
+
this.dom.tabDiv.style("display", this.state.nav.header_mode === "with_tabs" ? "inline-block" : "none");
|
|
877
|
+
this.dom.tip.hide();
|
|
878
|
+
this.activeTab = this.state.nav.activeTab;
|
|
879
|
+
this.prevCohort = this.activeCohort;
|
|
880
|
+
this.activeCohort = +this.state.activeCohort;
|
|
881
|
+
this.filterUiRoot = getFilterItemByTag(this.state.filter, "filterUiRoot");
|
|
882
|
+
this.cohortFilter = getFilterItemByTag(this.state.filter, "cohortFilter");
|
|
883
|
+
if (this.cohortNames) {
|
|
884
|
+
this.activeCohortName = this.cohortNames[this.activeCohort];
|
|
885
|
+
if (this.activeCohort !== -1)
|
|
886
|
+
this.activeCohortLabel = this.state.termdbConfig.selectCohort.values[this.activeCohort].shortLabel;
|
|
887
|
+
}
|
|
888
|
+
this.filterJSON = JSON.stringify(this.state.filter);
|
|
889
|
+
this.cohortsData = await this.app.vocabApi.getCohortsData();
|
|
890
|
+
if (this.state.nav.header_mode === "with_tabs") {
|
|
891
|
+
if (!(this.activeCohort in this.samplecounts)) {
|
|
892
|
+
this.samplecounts[this.activeCohort] = await this.app.vocabApi.getCohortSampleCount(this.activeCohortName);
|
|
893
|
+
}
|
|
894
|
+
if (!(this.filterJSON in this.samplecounts)) {
|
|
895
|
+
if (!this.filterUiRoot || !this.filterUiRoot.lst.length) {
|
|
896
|
+
this.samplecounts[this.filterJSON] = this.samplecounts[this.activeCohort];
|
|
897
|
+
} else {
|
|
898
|
+
const n = await this.app.vocabApi.getFilteredSampleCount(this.filterJSON);
|
|
899
|
+
this.samplecounts[this.filterJSON] = n;
|
|
900
|
+
}
|
|
901
|
+
}
|
|
902
|
+
}
|
|
903
|
+
this.updateUI();
|
|
904
|
+
}
|
|
905
|
+
};
|
|
906
|
+
var navInit = getCompInit(TdbNav);
|
|
907
|
+
function setRenderers2(self) {
|
|
908
|
+
self.initUI = (appState) => {
|
|
909
|
+
const verifiedToken = self.app.vocabApi.verifiedToken;
|
|
910
|
+
const invalidTokenErrorHandling = appState.termdbConfig.invalidTokenErrorHandling;
|
|
911
|
+
if (!verifiedToken && invalidTokenErrorHandling?.affectedCharts?.includes("*"))
|
|
912
|
+
throw new Error(appState.termdbConfig.invalidTokenErrorHandling.errorMessage);
|
|
913
|
+
const header = self.opts.holder.append("div").style("white-space", "nowrap");
|
|
914
|
+
const massNav = appState.termdbConfig?.massNav || {};
|
|
915
|
+
let titleDiv = header.append("div").style("display", "inline-block").style("float", "right").style("font-size", "1.1em").style("margin", "50px 10px 0 0").text(massNav?.title?.text);
|
|
916
|
+
const tabDiv = header.append("div").style("display", "none").style("vertical-align", "bottom");
|
|
917
|
+
const controlsDiv = header.append("div").style("vertical-align", "top").style("margin", "10px").style("display", "inline-block").style("float", "right");
|
|
918
|
+
if (self.opts.header_mode === "only_buttons") {
|
|
919
|
+
tabDiv.style("display", "none");
|
|
920
|
+
titleDiv.style("display", "none");
|
|
921
|
+
controlsDiv.style("display", "none");
|
|
922
|
+
}
|
|
923
|
+
self.opts.holder.attr("class", "sjpp-nav");
|
|
924
|
+
self.dom = {
|
|
925
|
+
holder: self.opts.holder,
|
|
926
|
+
header,
|
|
927
|
+
tabDiv,
|
|
928
|
+
controlsDiv,
|
|
929
|
+
searchDiv: controlsDiv.append("div").style("margin", "10px"),
|
|
930
|
+
sessionDiv: controlsDiv.append("div").style("display", "inline-block"),
|
|
931
|
+
recoverDiv: controlsDiv.append("div").style("display", "inline-block"),
|
|
932
|
+
pdfDiv: controlsDiv.append("div").style("display", "inline-block").style("padding", "4px").style("vertical-align", "middle"),
|
|
933
|
+
deleteAllDiv: controlsDiv.append("div").style("display", "inline-block").style("padding", "4px").style("vertical-align", "middle"),
|
|
934
|
+
helpDiv: controlsDiv.append("div").style("display", "none"),
|
|
935
|
+
sessionElapsedMessageDiv: controlsDiv.append("div").style("display", "none"),
|
|
936
|
+
subheaderDiv: self.opts.holder.append("div").style("display", "block").style("border-bottom", "1px solid #000"),
|
|
937
|
+
messageDiv: self.opts.holder.append("div").style("margin", "30px").style("display", "none"),
|
|
938
|
+
titleDiv,
|
|
939
|
+
tip: new Menu({ padding: "5px" })
|
|
940
|
+
};
|
|
941
|
+
icons["trash"](self.dom.deleteAllDiv, {
|
|
942
|
+
handler: self.deletePlots,
|
|
943
|
+
title: "Delete all plots. To revert, click Undo button"
|
|
944
|
+
});
|
|
945
|
+
icons["pdf"](self.dom.pdfDiv, {
|
|
946
|
+
handler: self.opts.downloadPlots,
|
|
947
|
+
title: "Generate a PDF of all the plots opened"
|
|
948
|
+
});
|
|
949
|
+
if (self.opts.header_mode === "with_cohortHtmlSelect") {
|
|
950
|
+
self.dom.cohortStandaloneDiv = header.append("div").style("display", "inline-block").style("margin", "10px").style("vertical-align", "top");
|
|
951
|
+
self.dom.cohortStandaloneDiv.append("label").html("Cohort: ");
|
|
952
|
+
self.dom.cohortSelect = self.dom.cohortStandaloneDiv.append("select").on("change", async function() {
|
|
953
|
+
self.app.dispatch({ type: "cohort_set", activeCohort: +this.value });
|
|
954
|
+
});
|
|
955
|
+
self.dom.cohortSelect.selectAll("option").data(appState.termdbConfig.selectCohort.values).enter().append("option").attr("value", (d, i) => i).property("selected", (d, i) => i === appState.activeCohort).html((d) => d.shortLabel);
|
|
956
|
+
}
|
|
957
|
+
self.dom.subheader = Object.freeze({
|
|
958
|
+
// For either the COHORT or ABOUT tab
|
|
959
|
+
about: self.dom.subheaderDiv.append("div").style("display", "none").attr("data-testid", "sjpp-mass-about"),
|
|
960
|
+
search: self.dom.subheaderDiv.append("div").style("display", "none"),
|
|
961
|
+
groups: self.dom.subheaderDiv.append("div").style("display", "none"),
|
|
962
|
+
charts: self.dom.subheaderDiv.append("div").style("display", "none"),
|
|
963
|
+
filter: self.dom.subheaderDiv.append("div").style("display", "none")
|
|
964
|
+
// cart: self.dom.subheaderDiv.append('div').style('display', 'none').html('<br/>Cart feature under construction - work in progress<br/> <br/>'),
|
|
965
|
+
});
|
|
966
|
+
if (!massNav.tabs?.about?.hide) {
|
|
967
|
+
self.tabs.push(aboutTab);
|
|
968
|
+
const override = Object.assign({}, massNav.tabs?.about);
|
|
969
|
+
if (appState.termdbConfig?.selectCohort) {
|
|
970
|
+
if (!override.top) override.top = "COHORT";
|
|
971
|
+
} else {
|
|
972
|
+
if (!override.mid) override.mid = self.pickDatasetLabel(appState);
|
|
973
|
+
}
|
|
974
|
+
Object.assign(aboutTab, override);
|
|
975
|
+
}
|
|
976
|
+
if (!massNav.tabs?.charts?.hide) {
|
|
977
|
+
self.tabs.push(chartTab);
|
|
978
|
+
Object.assign(chartTab, massNav.tabs?.charts);
|
|
979
|
+
}
|
|
980
|
+
if (!massNav.tabs?.groups?.hide) {
|
|
981
|
+
self.tabs.push(groupsTab);
|
|
982
|
+
Object.assign(groupsTab, massNav.tabs?.groups);
|
|
983
|
+
}
|
|
984
|
+
if (!massNav.tabs?.filter?.hide) {
|
|
985
|
+
self.tabs.push(filterTab);
|
|
986
|
+
Object.assign(filterTab, massNav.tabs?.filter);
|
|
987
|
+
}
|
|
988
|
+
const table = self.dom.tabDiv.append("table").style("border-collapse", "collapse");
|
|
989
|
+
table.selectAll("tr").data(["top", "mid", "btm"]).enter().append("tr").style("font-size", (d, i) => i == 1 ? "20px" : "12px").selectAll("td").data(
|
|
990
|
+
(key, i) => self.tabs.map((row, colNum) => {
|
|
991
|
+
return { rowNum: i, key, colNum, label: row[key], subheader: row.subheader };
|
|
992
|
+
})
|
|
993
|
+
).enter().append("td").style("display", "none").style("width", "100px").style("padding", (d) => d.rowNum === 0 ? "12px 12px 3px 12px" : "3px 12px").style("text-align", "center").style("border-left", "1px solid #ccc").style("border-right", "1px solid #ccc").style("color", "#aaa").style("cursor", "pointer").html((d) => d.label).on("click", (event2, d) => {
|
|
994
|
+
self.setTab(event2, d);
|
|
995
|
+
}).on("mouseover", (event2, d) => {
|
|
996
|
+
self.mouseover(event2, d);
|
|
997
|
+
}).on("mouseout", () => {
|
|
998
|
+
self.mouseout();
|
|
999
|
+
});
|
|
1000
|
+
self.dom.trs = table.selectAll("tr");
|
|
1001
|
+
self.dom.tds = table.selectAll("td");
|
|
1002
|
+
self.subheaderKeys = self.tabs.map((d) => d.subheader);
|
|
1003
|
+
self.dom.saveBtn = self.dom.sessionDiv.append("button").style("margin", "10px").text("Session \u25BC");
|
|
1004
|
+
if (self.sessionDaysLeft != null) {
|
|
1005
|
+
self.dom.fileBtn = self.dom.sessionDiv.append("button").style("margin", "10px").text("Export Session").on("click", (event2) => {
|
|
1006
|
+
self.getSessionFile(event2);
|
|
1007
|
+
});
|
|
1008
|
+
}
|
|
1009
|
+
};
|
|
1010
|
+
self.deletePlots = () => {
|
|
1011
|
+
const state = self.app.getState();
|
|
1012
|
+
const subactions = [];
|
|
1013
|
+
for (const plot of state.plots) subactions.push({ type: "plot_delete", id: plot.id });
|
|
1014
|
+
self.app.dispatch({ type: "app_refresh", subactions });
|
|
1015
|
+
};
|
|
1016
|
+
self.mayShowMessage_sessionDaysLeft = () => {
|
|
1017
|
+
if (!Number.isFinite(self.sessionDaysLeft)) {
|
|
1018
|
+
return;
|
|
1019
|
+
}
|
|
1020
|
+
self.dom.sessionElapsedMessageDiv.style("display", "block");
|
|
1021
|
+
self.dom.remainingDaysMessage = self.dom.sessionElapsedMessageDiv.append("div").style("display", "block").style("opacity", "0.65").html(
|
|
1022
|
+
`<u>${self.sessionDaysLeft} days</u> left until this session is removed. Click the "Session \u25BC" button and select "Save" option to create a new one.`
|
|
1023
|
+
);
|
|
1024
|
+
};
|
|
1025
|
+
self.updateUI = async () => {
|
|
1026
|
+
if (!self.dom.subheaderDiv) return;
|
|
1027
|
+
if (self.activeTab && self.state.termdbConfig.selectCohort && self.activeCohort == -1) {
|
|
1028
|
+
self.dom.subheaderDiv.style("display", "none");
|
|
1029
|
+
self.dom.messageDiv.selectAll("text").remove();
|
|
1030
|
+
self.dom.messageDiv.style("display", "").text('No cohort selected. Please select a cohort in the "COHORT" tab.');
|
|
1031
|
+
} else {
|
|
1032
|
+
if (self.dom.subheaderDiv) self.dom.subheaderDiv.style("display", self.activeTab != -1 ? "block" : "none");
|
|
1033
|
+
if (self.dom.messageDiv) self.dom.messageDiv.style("display", "none");
|
|
1034
|
+
}
|
|
1035
|
+
const selectCohort = self.state.termdbConfig.selectCohort;
|
|
1036
|
+
const massNav = self.state.termdbConfig.massNav;
|
|
1037
|
+
self.dom.searchDiv.style("display", selectCohort && self.activeCohort == -1 ? "none" : "inline-block");
|
|
1038
|
+
self.dom.header.style("border-bottom", self.state.nav.header_mode === "with_tabs" ? "1px solid #000" : "");
|
|
1039
|
+
self.dom.tds.style("display", "").style("color", (d) => d.colNum == self.activeTab ? activeTabTextColor : inactiveTabTextColor).style(
|
|
1040
|
+
"background-color",
|
|
1041
|
+
(d) => d.colNum == self.activeTab && self.dom.subheaderDiv.style("display") != "none" ? self.state.termdbConfig.massNav?.activeColor || activeTabBgColor : "transparent"
|
|
1042
|
+
).html(function(d, i) {
|
|
1043
|
+
if (d.key == "top") return this.innerHTML;
|
|
1044
|
+
if (d.subheader == "groups") {
|
|
1045
|
+
if (d.key == "mid") return self.state.groups.length || "NONE";
|
|
1046
|
+
return "";
|
|
1047
|
+
}
|
|
1048
|
+
if (d.subheader === "charts") {
|
|
1049
|
+
const n = self.state.plots.filter((p) => !p.parentId).length;
|
|
1050
|
+
if (d.key == "mid") return !n ? "NONE" : n;
|
|
1051
|
+
else return "";
|
|
1052
|
+
} else if (d.subheader === "about") {
|
|
1053
|
+
if (self.activeCohort != -1 && self.activeCohort in self.samplecounts) {
|
|
1054
|
+
const aboutMap = {
|
|
1055
|
+
top: this.innerHTML,
|
|
1056
|
+
mid: self.activeCohortLabel,
|
|
1057
|
+
btm: self.samplecounts[self.activeCohort]
|
|
1058
|
+
};
|
|
1059
|
+
return aboutMap[d.key] || "";
|
|
1060
|
+
} else if (!selectCohort) {
|
|
1061
|
+
const aboutMap = {
|
|
1062
|
+
top: massNav?.tabs?.about?.top || "ABOUT",
|
|
1063
|
+
mid: massNav?.tabs?.about?.mid || this.innerHTML,
|
|
1064
|
+
btm: massNav?.tabs?.about?.btm || self.samplecounts[self.activeCohort]
|
|
1065
|
+
};
|
|
1066
|
+
return aboutMap[d.key] || "";
|
|
1067
|
+
} else {
|
|
1068
|
+
return d.key === "mid" ? "NONE" : this.innerHTML;
|
|
1069
|
+
}
|
|
1070
|
+
} else if (d.subheader === "filter") {
|
|
1071
|
+
const filter = self.filterUiRoot ? self.filterUiRoot : { lst: [] };
|
|
1072
|
+
if (filter.lst.length === 0) {
|
|
1073
|
+
return d.key === "mid" ? "NONE" : "";
|
|
1074
|
+
} else {
|
|
1075
|
+
const n = self.samplecounts[self.filterJSON] != void 0 ? "" + self.samplecounts[self.filterJSON] : "";
|
|
1076
|
+
return d.key === "mid" ? filter.lst.length : n;
|
|
1077
|
+
}
|
|
1078
|
+
} else {
|
|
1079
|
+
return d.key === "mid" ? this.innerHTML : " ";
|
|
1080
|
+
}
|
|
1081
|
+
});
|
|
1082
|
+
for (const key in self.dom.subheader) {
|
|
1083
|
+
self.dom.subheader[key].style(
|
|
1084
|
+
"display",
|
|
1085
|
+
self.activeTab == -1 ? "none" : self.tabs[self.activeTab].subheader === key ? "block" : "none"
|
|
1086
|
+
);
|
|
1087
|
+
}
|
|
1088
|
+
if (self.opts.header_mode === "with_cohortHtmlSelect") {
|
|
1089
|
+
self.dom.cohortSelect.selectAll("option").property("value", self.activeCohort);
|
|
1090
|
+
}
|
|
1091
|
+
};
|
|
1092
|
+
}
|
|
1093
|
+
function setInteractivity2(self) {
|
|
1094
|
+
self.setTab = async (event2, d) => {
|
|
1095
|
+
if (self.activeTab == -1) self.activeTab == d.colNum;
|
|
1096
|
+
if (d.colNum === self.activeTab && !self.searching) {
|
|
1097
|
+
if (self.activeTab == 0) return;
|
|
1098
|
+
self.prevCohort = self.activeCohort;
|
|
1099
|
+
await self.updateUI();
|
|
1100
|
+
self.app.dispatch({ type: "tab_set", activeTab: -1 });
|
|
1101
|
+
return;
|
|
1102
|
+
}
|
|
1103
|
+
self.activeTab = d.colNum;
|
|
1104
|
+
self.searching = false;
|
|
1105
|
+
self.app.dispatch({ type: "tab_set", activeTab: self.activeTab });
|
|
1106
|
+
const chartsIdx = self.subheaderKeys.indexOf("charts");
|
|
1107
|
+
if (self.activeTab == chartsIdx && self.activeCohort != -1 && !self.state.plots.length) {
|
|
1108
|
+
const defaultChartType = self.state.termdbConfig.defaultChartType || "dictionary";
|
|
1109
|
+
self.app.dispatch({
|
|
1110
|
+
type: "plot_create",
|
|
1111
|
+
id: getId(),
|
|
1112
|
+
config: { chartType: defaultChartType }
|
|
1113
|
+
});
|
|
1114
|
+
}
|
|
1115
|
+
};
|
|
1116
|
+
self.mouseover = (event2, d) => {
|
|
1117
|
+
const defaultActiveColor = self.state.termdbConfig.massNav?.activeColor || activeTabBgColor;
|
|
1118
|
+
self.dom.tds.style("background-color", (t) => {
|
|
1119
|
+
if (t.colNum === d.colNum)
|
|
1120
|
+
return self.activeTab == t.colNum ? self.state.termdbConfig.massNav?.activeColorHover || activeTabBgColorHover : inactiveTabBgColorHover;
|
|
1121
|
+
return self.activeTab == t.colNum ? defaultActiveColor : "transparent";
|
|
1122
|
+
});
|
|
1123
|
+
};
|
|
1124
|
+
self.mouseout = () => {
|
|
1125
|
+
const defaultActiveColor = self.state.termdbConfig.massNav?.activeColor || activeTabBgColor;
|
|
1126
|
+
self.dom.tds.style("background-color", (t) => self.activeTab == t.colNum ? defaultActiveColor : "transparent");
|
|
1127
|
+
};
|
|
1128
|
+
self.getSessionFile = async (event2) => {
|
|
1129
|
+
const res = await dofetch3(`/massSession?id=${self.sessionId}`);
|
|
1130
|
+
const a = document.createElement("a");
|
|
1131
|
+
const dataStr = "data:application/json;charset=utf-8," + encodeURIComponent(JSON.stringify(res.state));
|
|
1132
|
+
a.setAttribute("href", dataStr);
|
|
1133
|
+
a.download = `${self.sessionId}.json`;
|
|
1134
|
+
a.click();
|
|
1135
|
+
a.remove();
|
|
1136
|
+
};
|
|
1137
|
+
self.pickDatasetLabel = (appState) => {
|
|
1138
|
+
const dslabel = appState.vocab.dslabel.toUpperCase();
|
|
1139
|
+
return dslabel.length > 10 ? `${dslabel.slice(0, 10)}...` : dslabel;
|
|
1140
|
+
};
|
|
1141
|
+
}
|
|
1142
|
+
|
|
1143
|
+
export {
|
|
1144
|
+
getId,
|
|
1145
|
+
navInit
|
|
1146
|
+
};
|
|
1147
|
+
//# sourceMappingURL=chunk-HMXYZXDN.js.map
|