@research-copilot/plugin 1.1.16 → 1.1.18

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (799) hide show
  1. package/dist/.claude-plugin/plugin.json +1 -1
  2. package/dist/.codex-plugin/plugin.toml +1 -1
  3. package/dist/.cursor-plugin/plugin.json +1 -1
  4. package/dist/.gemini-plugin/plugin.json +1 -1
  5. package/dist/.opencode-plugin/plugin.json +1 -1
  6. package/dist/.windsurf-plugin/plugin.json +1 -1
  7. package/dist/skills/ablation-planner/SKILL.md +126 -0
  8. package/dist/skills/alphaxiv/SKILL.md +186 -0
  9. package/dist/skills/analyze-results/SKILL.md +45 -0
  10. package/dist/skills/arxiv/SKILL.md +210 -0
  11. package/dist/skills/auto-paper-improvement-loop/SKILL.md +574 -0
  12. package/dist/skills/auto-review-loop/SKILL.md +370 -0
  13. package/dist/skills/auto-review-loop-llm/SKILL.md +247 -0
  14. package/dist/skills/auto-review-loop-minimax/SKILL.md +290 -0
  15. package/dist/skills/benchmark-paper-template/SKILL.md +142 -0
  16. package/dist/skills/benchmark-paper-template/references/benchmark-design.md +180 -0
  17. package/dist/skills/benchmark-paper-template/references/checklist.md +113 -0
  18. package/dist/skills/benchmark-paper-template/references/construction-pipeline.md +127 -0
  19. package/dist/skills/benchmark-paper-template/references/experiments.md +159 -0
  20. package/dist/skills/benchmark-paper-template/references/gap-analysis.md +86 -0
  21. package/dist/skills/benchmark-paper-template/references/instantiation-template.md +194 -0
  22. package/dist/skills/benchmark-paper-template/references/orchestrator-notes.md +96 -0
  23. package/dist/skills/benchmark-paper-template/references/paper-structure.md +209 -0
  24. package/dist/skills/citation-audit/SKILL.md +494 -0
  25. package/dist/skills/claims-drafting/SKILL.md +239 -0
  26. package/dist/skills/comm-lit-review/SKILL.md +299 -0
  27. package/dist/skills/comm-lit-review/references/domain-taxonomy.md +57 -0
  28. package/dist/skills/comm-lit-review/references/output-template.md +37 -0
  29. package/dist/skills/comm-lit-review/references/source-policy.md +99 -0
  30. package/dist/skills/comm-lit-review/references/venue-tiering.md +112 -0
  31. package/dist/skills/composer/SKILL.md +840 -0
  32. package/dist/skills/composer/references/section_guides.md +675 -0
  33. package/dist/skills/composer/references/writing_standards.md +629 -0
  34. package/dist/skills/composer/scripts/chapter_quality_check.py +470 -0
  35. package/dist/skills/composer/scripts/final_evaluation.py +550 -0
  36. package/dist/skills/deepxiv/SKILL.md +142 -0
  37. package/dist/skills/dse-loop/SKILL.md +277 -0
  38. package/dist/skills/embodiment-description/SKILL.md +129 -0
  39. package/dist/skills/exa-search/SKILL.md +192 -0
  40. package/dist/skills/experiment-audit/SKILL.md +262 -0
  41. package/dist/skills/experiment-bridge/SKILL.md +316 -0
  42. package/dist/skills/experiment-plan/SKILL.md +249 -0
  43. package/dist/skills/experiment-queue/SKILL.md +380 -0
  44. package/dist/skills/experiment-queue/scripts/build_manifest.py +142 -0
  45. package/dist/skills/experiment-queue/scripts/queue_manager.py +426 -0
  46. package/dist/skills/feishu-notify/SKILL.md +155 -0
  47. package/dist/skills/figure-description/SKILL.md +138 -0
  48. package/dist/skills/figure-designer/SKILL.md +207 -0
  49. package/dist/skills/figure-designer/references/design-rules.md +99 -0
  50. package/dist/skills/figure-designer/references/experimental-results.md +127 -0
  51. package/dist/skills/figure-designer/references/motivated-example.md +138 -0
  52. package/dist/skills/figure-designer/references/solution-overview.md +145 -0
  53. package/dist/skills/figure-designer/references/tools.md +124 -0
  54. package/dist/skills/figure-spec/SKILL.md +252 -0
  55. package/dist/skills/figure-spec/scripts/figure_renderer.py +799 -0
  56. package/dist/skills/formula-derivation/SKILL.md +280 -0
  57. package/dist/skills/gemini-search/SKILL.md +205 -0
  58. package/dist/skills/grant-proposal/SKILL.md +625 -0
  59. package/dist/skills/humanizer/AGENTS.md +25 -0
  60. package/dist/skills/humanizer/SKILL.md +621 -0
  61. package/dist/skills/idea-creator/SKILL.md +311 -0
  62. package/dist/skills/idea-discovery/SKILL.md +340 -0
  63. package/dist/skills/idea-discovery-robot/SKILL.md +362 -0
  64. package/dist/skills/idea-evaluator/SKILL.md +265 -0
  65. package/dist/skills/idea-evaluator/references/fatal-flaws.md +192 -0
  66. package/dist/skills/idea-evaluator/references/five-dimensions.md +251 -0
  67. package/dist/skills/idea-evaluator/references/lifecycle-capability-matching.md +177 -0
  68. package/dist/skills/idea-evaluator/references/paradigm-elephant.md +112 -0
  69. package/dist/skills/idea-evaluator/references/paradigm-examples.md +107 -0
  70. package/dist/skills/idea-evaluator/references/paradigm-first-principles.md +115 -0
  71. package/dist/skills/idea-evaluator/references/paradigm-hamming.md +137 -0
  72. package/dist/skills/idea-evaluator/references/paradigm-shift-probe.md +160 -0
  73. package/dist/skills/idea-evaluator/references/paradigm-technology-cycle.md +116 -0
  74. package/dist/skills/idea-evaluator/references/worked-examples.md +206 -0
  75. package/dist/skills/interview-cheatsheet/SKILL.md +245 -0
  76. package/dist/skills/intro-drafter/SKILL.md +250 -0
  77. package/dist/skills/intro-drafter/references/contribution-patterns.md +116 -0
  78. package/dist/skills/intro-drafter/references/flowchart.md +204 -0
  79. package/dist/skills/intro-drafter/references/paper-types.md +155 -0
  80. package/dist/skills/intro-drafter/references/running-example.md +133 -0
  81. package/dist/skills/intro-drafter/references/worked-examples.md +161 -0
  82. package/dist/skills/invention-structuring/SKILL.md +188 -0
  83. package/dist/skills/jurisdiction-format/SKILL.md +192 -0
  84. package/dist/skills/kill-argument/SKILL.md +384 -0
  85. package/dist/skills/llm-wiki/.mise.toml +2 -0
  86. package/dist/skills/llm-wiki/.nvmrc +1 -0
  87. package/dist/skills/llm-wiki/AGENTS.md +132 -0
  88. package/dist/skills/llm-wiki/CHANGELOG.md +459 -0
  89. package/dist/skills/llm-wiki/CLAUDE.md +109 -0
  90. package/dist/skills/llm-wiki/HERMES.md +44 -0
  91. package/dist/skills/llm-wiki/SKILL.md +1133 -0
  92. package/dist/skills/llm-wiki/assets/graph-demo.gif +0 -0
  93. package/dist/skills/llm-wiki/assets/graph-preview.png +0 -0
  94. package/dist/skills/llm-wiki/deps/LICENSE-d3.txt +13 -0
  95. package/dist/skills/llm-wiki/deps/LICENSE-marked.txt +44 -0
  96. package/dist/skills/llm-wiki/deps/LICENSE-purify.txt +568 -0
  97. package/{LICENSE → dist/skills/llm-wiki/deps/LICENSE-roughjs.txt} +1 -1
  98. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/SKILL.md +261 -0
  99. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/references/config/first-time-setup.md +106 -0
  100. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/cdp.ts +179 -0
  101. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/constants.ts +13 -0
  102. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/defuddle-converter.ts +58 -0
  103. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/html-to-markdown.ts +135 -0
  104. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/legacy-converter.ts +629 -0
  105. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/main.ts +314 -0
  106. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/markdown-conversion-shared.ts +305 -0
  107. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/media-localizer.ts +317 -0
  108. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/package.json +14 -0
  109. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/paths.ts +29 -0
  110. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/vendor/baoyu-chrome-cdp/package.json +9 -0
  111. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/vendor/baoyu-chrome-cdp/src/index.test.ts +307 -0
  112. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/vendor/baoyu-chrome-cdp/src/index.ts +523 -0
  113. package/dist/skills/llm-wiki/deps/d3.min.js +2 -0
  114. package/dist/skills/llm-wiki/deps/marked.min.js +6 -0
  115. package/dist/skills/llm-wiki/deps/purify.min.js +3 -0
  116. package/dist/skills/llm-wiki/deps/rough.min.js +7 -0
  117. package/dist/skills/llm-wiki/deps/youtube-transcript/SKILL.md +47 -0
  118. package/dist/skills/llm-wiki/deps/youtube-transcript/scripts/get_transcript.py +72 -0
  119. package/dist/skills/llm-wiki/docs/design/oriental-atlas/DESIGN.md +183 -0
  120. package/dist/skills/llm-wiki/docs/design/oriental-atlas/design-brief.md +170 -0
  121. package/dist/skills/llm-wiki/docs/design/oriental-atlas/oriental-editorial-atlas.html +1908 -0
  122. package/dist/skills/llm-wiki/docs/design/oriental-atlas/reviews/result-review.md +68 -0
  123. package/dist/skills/llm-wiki/docs/plans/2026-06-15-omp-tool-status-events-phased-plan.md +655 -0
  124. package/dist/skills/llm-wiki/docs/plans/2026-06-15-omp-tool-status-events-progress.json +913 -0
  125. package/dist/skills/llm-wiki/docs/spark/2026-06-15-omp-tool-status-events-design.md +174 -0
  126. package/dist/skills/llm-wiki/install.ps1 +87 -0
  127. package/dist/skills/llm-wiki/install.sh +722 -0
  128. package/dist/skills/llm-wiki/package-lock.json +10309 -0
  129. package/dist/skills/llm-wiki/package.json +24 -0
  130. package/dist/skills/llm-wiki/packages/graph-engine/package.json +33 -0
  131. package/dist/skills/llm-wiki/packages/graph-engine/src/anim/.gitkeep +1 -0
  132. package/dist/skills/llm-wiki/packages/graph-engine/src/anim/index.ts +179 -0
  133. package/dist/skills/llm-wiki/packages/graph-engine/src/diff.ts +121 -0
  134. package/dist/skills/llm-wiki/packages/graph-engine/src/graph-node.ts +37 -0
  135. package/dist/skills/llm-wiki/packages/graph-engine/src/index.ts +140 -0
  136. package/dist/skills/llm-wiki/packages/graph-engine/src/model/atlas.ts +18 -0
  137. package/dist/skills/llm-wiki/packages/graph-engine/src/model/index.ts +6 -0
  138. package/dist/skills/llm-wiki/packages/graph-engine/src/model/labels.ts +11 -0
  139. package/dist/skills/llm-wiki/packages/graph-engine/src/model/learning.ts +8 -0
  140. package/dist/skills/llm-wiki/packages/graph-engine/src/model/legacy-helpers.ts +1373 -0
  141. package/dist/skills/llm-wiki/packages/graph-engine/src/model/queue.ts +7 -0
  142. package/dist/skills/llm-wiki/packages/graph-engine/src/model/storage.ts +4 -0
  143. package/dist/skills/llm-wiki/packages/graph-engine/src/model/visibility.ts +9 -0
  144. package/dist/skills/llm-wiki/packages/graph-engine/src/render/.gitkeep +1 -0
  145. package/dist/skills/llm-wiki/packages/graph-engine/src/render/index.ts +59 -0
  146. package/dist/skills/llm-wiki/packages/graph-engine/src/render/legend.ts +25 -0
  147. package/dist/skills/llm-wiki/packages/graph-engine/src/render/model.ts +593 -0
  148. package/dist/skills/llm-wiki/packages/graph-engine/src/render/preview.ts +65 -0
  149. package/dist/skills/llm-wiki/packages/graph-engine/src/render/search.ts +48 -0
  150. package/dist/skills/llm-wiki/packages/graph-engine/src/render/static-renderer.ts +2783 -0
  151. package/dist/skills/llm-wiki/packages/graph-engine/src/render/toolbar.ts +40 -0
  152. package/dist/skills/llm-wiki/packages/graph-engine/src/render/viewport.ts +272 -0
  153. package/dist/skills/llm-wiki/packages/graph-engine/src/select/.gitkeep +1 -0
  154. package/dist/skills/llm-wiki/packages/graph-engine/src/select/index.ts +189 -0
  155. package/dist/skills/llm-wiki/packages/graph-engine/src/sim/index.ts +298 -0
  156. package/dist/skills/llm-wiki/packages/graph-engine/src/sim/pins.ts +96 -0
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  160. package/dist/skills/llm-wiki/packages/graph-engine/src/types.ts +313 -0
  161. package/dist/skills/llm-wiki/packages/graph-engine/test/anim.test.ts +100 -0
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  164. package/dist/skills/llm-wiki/packages/graph-engine/test/learning.test.ts +259 -0
  165. package/dist/skills/llm-wiki/packages/graph-engine/test/preview.test.ts +56 -0
  166. package/dist/skills/llm-wiki/packages/graph-engine/test/queue.test.ts +114 -0
  167. package/dist/skills/llm-wiki/packages/graph-engine/test/render-model.test.ts +322 -0
  168. package/dist/skills/llm-wiki/packages/graph-engine/test/runtime-state.test.ts +281 -0
  169. package/dist/skills/llm-wiki/packages/graph-engine/test/search-and-legend.test.ts +111 -0
  170. package/dist/skills/llm-wiki/packages/graph-engine/test/select.test.ts +168 -0
  171. package/dist/skills/llm-wiki/packages/graph-engine/test/sim.test.ts +123 -0
  172. package/dist/skills/llm-wiki/packages/graph-engine/test/themes.test.ts +62 -0
  173. package/dist/skills/llm-wiki/packages/graph-engine/test/toolbar.test.ts +64 -0
  174. package/dist/skills/llm-wiki/packages/graph-engine/test/viewport.test.ts +167 -0
  175. package/dist/skills/llm-wiki/packages/graph-engine/tsconfig.json +17 -0
  176. package/dist/skills/llm-wiki/packages/graph-engine/vite.config.ts +15 -0
  177. package/dist/skills/llm-wiki/platforms/claude/CLAUDE.md +37 -0
  178. package/dist/skills/llm-wiki/platforms/claude/companions/llm-wiki-upgrade/SKILL.md +95 -0
  179. package/dist/skills/llm-wiki/platforms/codex/AGENTS.md +23 -0
  180. package/dist/skills/llm-wiki/scripts/adapter-state.sh +424 -0
  181. package/dist/skills/llm-wiki/scripts/build-graph-data.sh +395 -0
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  799. package/package.json +1 -1
@@ -0,0 +1,46 @@
1
+ #!/bin/bash
2
+ # SessionStart hook: 会话开始时注入 wiki 上下文(只触发一次)
3
+
4
+ set -euo pipefail
5
+
6
+ SCRIPT_DIR="$(cd "$(dirname "$0")" && pwd)"
7
+ # shellcheck disable=SC1091
8
+ source "$SCRIPT_DIR/shared-config.sh"
9
+
10
+ WIKI_PATH=""
11
+
12
+ if [ -f "$HOME/.llm-wiki-path" ]; then
13
+ WIKI_PATH="$(cat "$HOME/.llm-wiki-path")"
14
+ fi
15
+
16
+ if [ -z "$WIKI_PATH" ] && [ -f .wiki-schema.md ]; then
17
+ WIKI_PATH="$(pwd)"
18
+ fi
19
+
20
+ if [ -z "$WIKI_PATH" ] || [ ! -f "$WIKI_PATH/.wiki-schema.md" ]; then
21
+ printf '{}\n'
22
+ exit 0
23
+ fi
24
+
25
+ require_python_cmd
26
+
27
+ "$PYTHON_CMD" - "$WIKI_PATH" <<'PY'
28
+ import json
29
+ import os
30
+ import sys
31
+
32
+ # 防御性:即使上游 shared-config.sh 未设置 PYTHONIOENCODING,
33
+ # 此处也强制 stdout 为 UTF-8,避免 Agent 接到 gbk 字节
34
+ if hasattr(sys.stdout, "reconfigure"):
35
+ sys.stdout.reconfigure(encoding="utf-8")
36
+
37
+ wiki_path = os.path.realpath(sys.argv[1])
38
+ message = f"[llm-wiki] 检测到知识库: {wiki_path}/index.md,回答问题时优先查阅 wiki 内容获取上下文"
39
+
40
+ print(json.dumps({
41
+ "hookSpecificOutput": {
42
+ "hookEventName": "SessionStart",
43
+ "additionalContext": message,
44
+ }
45
+ }, ensure_ascii=False))
46
+ PY
@@ -0,0 +1,95 @@
1
+ #!/bin/bash
2
+ # llm-wiki 初始化脚本
3
+ # 自动创建知识库的目录结构
4
+ # 用法:bash init-wiki.sh <知识库路径> <主题>
5
+
6
+ set -e
7
+
8
+ WIKI_ROOT="${1:-$HOME/Documents/我的知识库}"
9
+ TOPIC="${2:-我的知识库}"
10
+ LANGUAGE="${3:-中文}"
11
+ DATE=$(date +%Y-%m-%d)
12
+ SKILL_DIR="$(cd "$(dirname "$0")/.." && pwd)"
13
+
14
+ # 安全的模板变量替换函数(用 perl 替代 sed,避免中文/空格/特殊字符问题)
15
+ replace_vars() {
16
+ local input_file="$1"
17
+ local output_file="$2"
18
+ TOPIC_VALUE="$TOPIC" \
19
+ DATE_VALUE="$DATE" \
20
+ WIKI_ROOT_VALUE="$WIKI_ROOT" \
21
+ LANGUAGE_VALUE="$LANGUAGE" \
22
+ perl -pe '
23
+ s/\{\{TOPIC\}\}/$ENV{TOPIC_VALUE}/g;
24
+ s/\{\{DATE\}\}/$ENV{DATE_VALUE}/g;
25
+ s/\{\{WIKI_ROOT\}\}/$ENV{WIKI_ROOT_VALUE}/g;
26
+ s/\{\{LANGUAGE\}\}/$ENV{LANGUAGE_VALUE}/g;
27
+ ' "$input_file" > "$output_file"
28
+ }
29
+
30
+ echo "正在创建知识库..."
31
+ echo " 路径:$WIKI_ROOT"
32
+ echo " 主题:$TOPIC"
33
+ echo " 语言:$LANGUAGE"
34
+ echo ""
35
+
36
+ # 创建目录结构(包含小红书和知乎)
37
+ mkdir -p "$WIKI_ROOT"/raw/{articles,tweets,wechat,xiaohongshu,zhihu,pdfs,notes,assets}
38
+ mkdir -p "$WIKI_ROOT"/wiki/{entities,topics,sources,comparisons,synthesis,synthesis/sessions,queries}
39
+
40
+ cat > "$WIKI_ROOT/.gitignore" <<'EOF'
41
+ .wiki-tmp/
42
+ EOF
43
+
44
+ echo "[完成] 目录结构已创建"
45
+
46
+ # 从模板生成文件
47
+ replace_vars "$SKILL_DIR/templates/schema-template.md" "$WIKI_ROOT/.wiki-schema.md"
48
+ echo "[完成] Schema 文件已生成"
49
+
50
+ replace_vars "$SKILL_DIR/templates/index-template.md" "$WIKI_ROOT/index.md"
51
+ echo "[完成] 索引文件已生成"
52
+
53
+ replace_vars "$SKILL_DIR/templates/log-template.md" "$WIKI_ROOT/log.md"
54
+ echo "[完成] 日志文件已生成"
55
+
56
+ replace_vars "$SKILL_DIR/templates/overview-template.md" "$WIKI_ROOT/wiki/overview.md"
57
+ echo "[完成] 总览文件已生成"
58
+
59
+ if [ "$LANGUAGE" = "English" ]; then
60
+ replace_vars "$SKILL_DIR/templates/purpose-en-template.md" "$WIKI_ROOT/purpose.md"
61
+ else
62
+ replace_vars "$SKILL_DIR/templates/purpose-template.md" "$WIKI_ROOT/purpose.md"
63
+ fi
64
+ echo "[完成] 研究方向文件已生成"
65
+
66
+ cat > "$WIKI_ROOT/.wiki-cache.json" <<'EOF'
67
+ {
68
+ "version": 1,
69
+ "entries": {}
70
+ }
71
+ EOF
72
+ echo "[完成] 缓存文件已生成"
73
+
74
+ echo ""
75
+ echo "知识库创建完成!"
76
+ echo ""
77
+ echo "目录结构:"
78
+ echo " $WIKI_ROOT/"
79
+ echo " ├── raw/ (原始素材)"
80
+ echo " │ ├── articles/ 网页文章"
81
+ echo " │ ├── tweets/ X/Twitter"
82
+ echo " │ ├── wechat/ 微信公众号"
83
+ echo " │ ├── xiaohongshu/ 小红书"
84
+ echo " │ ├── zhihu/ 知乎"
85
+ echo " │ ├── pdfs/ PDF"
86
+ echo " │ ├── notes/ 笔记"
87
+ echo " │ └── assets/ 图片等附件"
88
+ echo " ├── wiki/ (知识库)"
89
+ echo " ├── index.md (索引)"
90
+ echo " ├── log.md (日志)"
91
+ echo " ├── purpose.md (研究方向)"
92
+ echo " ├── .wiki-cache.json (缓存)"
93
+ echo " └── .wiki-schema.md (配置)"
94
+ echo ""
95
+ echo "下一步:给 agent 一个链接或文件,开始构建知识库!"
@@ -0,0 +1,158 @@
1
+ #!/usr/bin/env node
2
+ "use strict";
3
+
4
+ const SCAN_KINDS = [
5
+ { subdir: "entities", pageType: "entity", applicable: true },
6
+ { subdir: "topics", pageType: "topic", applicable: true },
7
+ { subdir: "sources", pageType: "source", applicable: true },
8
+ { subdir: "comparisons", pageType: "comparison", applicable: true },
9
+ { subdir: "queries", pageType: "query", applicable: false },
10
+ { subdir: "synthesis", pageType: "synthesis", applicable: false }
11
+ ];
12
+
13
+ function sortedUnique(values) {
14
+ return Array.from(new Set(values)).sort();
15
+ }
16
+
17
+ function extractFrontmatter(text) {
18
+ if (!text.startsWith("---\n") && !text.startsWith("---\r\n")) {
19
+ return { hasFrontmatter: false, frontmatter: "", body: text };
20
+ }
21
+
22
+ const match = text.match(/^---\r?\n([\s\S]*?)\r?\n---(?:\r?\n|$)([\s\S]*)$/);
23
+ if (!match) {
24
+ return { hasFrontmatter: false, frontmatter: "", body: text };
25
+ }
26
+
27
+ return {
28
+ hasFrontmatter: true,
29
+ frontmatter: match[1],
30
+ body: match[2]
31
+ };
32
+ }
33
+
34
+ function normalizeSourceToken(token) {
35
+ const trimmed = String(token || "").trim();
36
+ if (!trimmed) return null;
37
+
38
+ let value = trimmed;
39
+ if ((value.startsWith('"') && value.endsWith('"')) || (value.startsWith("'") && value.endsWith("'"))) {
40
+ value = value.slice(1, -1).trim();
41
+ }
42
+
43
+ return value || null;
44
+ }
45
+
46
+ function parseInlineSources(raw) {
47
+ const trimmed = raw.trim();
48
+ if (trimmed === "[]") return { ok: true, values: [] };
49
+ if (!(trimmed.startsWith("[") && trimmed.endsWith("]"))) {
50
+ return { ok: false, values: [] };
51
+ }
52
+
53
+ const inner = trimmed.slice(1, -1).trim();
54
+ if (!inner) return { ok: true, values: [] };
55
+
56
+ const values = inner
57
+ .split(",")
58
+ .map(normalizeSourceToken)
59
+ .filter(Boolean);
60
+
61
+ return { ok: true, values };
62
+ }
63
+
64
+ function parseSourcesFrontmatter(frontmatter) {
65
+ if (!frontmatter) {
66
+ return { hasField: false, parsed: false, sources: [], signalAvailable: false };
67
+ }
68
+
69
+ const lines = frontmatter.split(/\r?\n/);
70
+
71
+ for (let index = 0; index < lines.length; index += 1) {
72
+ const match = lines[index].match(/^sources:\s*(.*)$/);
73
+ if (!match) continue;
74
+
75
+ const rest = match[1].trim();
76
+ if (rest) {
77
+ if (!rest.startsWith("[")) {
78
+ const single = normalizeSourceToken(rest);
79
+ return {
80
+ hasField: true,
81
+ parsed: Boolean(single),
82
+ sources: single ? [single] : [],
83
+ signalAvailable: Boolean(single)
84
+ };
85
+ }
86
+
87
+ const parsedInline = parseInlineSources(rest);
88
+ return {
89
+ hasField: true,
90
+ parsed: parsedInline.ok,
91
+ sources: parsedInline.ok ? sortedUnique(parsedInline.values) : [],
92
+ signalAvailable: parsedInline.ok && parsedInline.values.length > 0
93
+ };
94
+ }
95
+
96
+ const collected = [];
97
+ let parsed = true;
98
+ let consumed = 0;
99
+
100
+ for (let cursor = index + 1; cursor < lines.length; cursor += 1) {
101
+ const line = lines[cursor];
102
+ if (!line.trim()) {
103
+ consumed += 1;
104
+ continue;
105
+ }
106
+ if (/^[^\s-]/.test(line)) break;
107
+ const itemMatch = line.match(/^\s*-\s*(.+)$/);
108
+ if (!itemMatch) {
109
+ parsed = false;
110
+ consumed += 1;
111
+ continue;
112
+ }
113
+ const token = normalizeSourceToken(itemMatch[1]);
114
+ if (token) collected.push(token);
115
+ consumed += 1;
116
+ }
117
+
118
+ index += consumed;
119
+ return {
120
+ hasField: true,
121
+ parsed,
122
+ sources: parsed ? sortedUnique(collected) : [],
123
+ signalAvailable: parsed && collected.length > 0
124
+ };
125
+ }
126
+
127
+ return { hasField: false, parsed: false, sources: [], signalAvailable: false };
128
+ }
129
+
130
+ function evaluateSourceSignalEligibility({ pageType, frontmatter }) {
131
+ const kind = SCAN_KINDS.find((k) => k.pageType === pageType);
132
+ if (!kind || !kind.applicable) {
133
+ return { eligible: false, reason: "not_applicable", sources: [] };
134
+ }
135
+
136
+ const parsed = parseSourcesFrontmatter(frontmatter);
137
+
138
+ if (!parsed.hasField) {
139
+ return { eligible: false, reason: "missing_sources", sources: [] };
140
+ }
141
+ if (!parsed.parsed) {
142
+ return { eligible: false, reason: "invalid_sources", sources: [] };
143
+ }
144
+ if (parsed.sources.length === 0) {
145
+ return { eligible: false, reason: "empty_sources", sources: [] };
146
+ }
147
+
148
+ return { eligible: true, reason: "ok", sources: parsed.sources };
149
+ }
150
+
151
+ module.exports = {
152
+ SCAN_KINDS,
153
+ extractFrontmatter,
154
+ evaluateSourceSignalEligibility,
155
+ normalizeSourceToken,
156
+ parseSourcesFrontmatter,
157
+ sortedUnique
158
+ };
@@ -0,0 +1,114 @@
1
+ #!/bin/bash
2
+ # lint-fix.sh — 自动修复 lint 发现的低风险问题
3
+ # 用法:bash scripts/lint-fix.sh <wiki_root> [--dry-run]
4
+ # 修复范围:仅处理确定性修复(补 index 条目),不做高风险操作(删页面、改内容)
5
+ # 退出码:0 = 完成,1 = 参数错误
6
+
7
+ set -u
8
+ shopt -s nullglob
9
+
10
+ WIKI_ROOT="${1:-.}"
11
+ DRY_RUN=false
12
+ [ "${2:-}" = "--dry-run" ] && DRY_RUN=true
13
+
14
+ WIKI_DIR="$WIKI_ROOT/wiki"
15
+ INDEX_FILE="$WIKI_ROOT/index.md"
16
+
17
+ if [ ! -d "$WIKI_DIR" ]; then
18
+ echo "ERROR: wiki directory not found: $WIKI_DIR" >&2
19
+ exit 1
20
+ fi
21
+ if [ ! -f "$INDEX_FILE" ]; then
22
+ echo "ERROR: index.md not found: $INDEX_FILE" >&2
23
+ exit 1
24
+ fi
25
+
26
+ FIXED=0
27
+
28
+ index_has_entry() {
29
+ local entry="$1"
30
+ grep -ohE "\[\[[^]]+\]\]" "$INDEX_FILE" 2>/dev/null | \
31
+ sed -e 's/\[\[//g' -e 's/\]\]//g' -e 's/|.*//' | \
32
+ grep -Fxq "$entry"
33
+ }
34
+
35
+ # Insert a [[link]] entry after the matching section header in index.md.
36
+ # If no matching section is found, appends to end of file as fallback.
37
+ insert_under_section() {
38
+ local index_file="$1"
39
+ local section_pattern="$2"
40
+ local entry="$3"
41
+
42
+ # Find the line number of the section header
43
+ local line_num
44
+ line_num=$(grep -n -i -E "^#.*($section_pattern)" "$index_file" 2>/dev/null | head -1 | cut -d: -f1)
45
+
46
+ if [ -n "$line_num" ]; then
47
+ # Scan from section header to find insert point:
48
+ # last "- [[" line before next "##" header or EOF
49
+ local total_lines last_list_line offset
50
+ total_lines=$(wc -l < "$index_file" | tr -d ' ')
51
+ last_list_line="$line_num"
52
+ offset=$((line_num + 1))
53
+ while [ "$offset" -le "$total_lines" ]; do
54
+ local cur_line
55
+ cur_line=$(sed -n "${offset}p" "$index_file")
56
+ case "$cur_line" in
57
+ "##"*) break ;;
58
+ "- [["*) last_list_line="$offset" ;;
59
+ esac
60
+ offset=$((offset + 1))
61
+ done
62
+ # Insert after the last list item
63
+ local tmp_file
64
+ tmp_file=$(mktemp "${index_file}.tmp.XXXXXX") || return 1
65
+ awk -v insert_after="$last_list_line" -v entry="$entry" '
66
+ { print }
67
+ NR == insert_after { print "- [[" entry "]]" }
68
+ ' "$index_file" > "$tmp_file" && mv "$tmp_file" "$index_file"
69
+ else
70
+ # Fallback: append to end of file
71
+ printf '\n- [[%s]]\n' "$entry" >> "$index_file"
72
+ fi
73
+ }
74
+
75
+ echo "=== lint-fix: low-risk auto-repair ==="
76
+ echo ""
77
+
78
+ # Fix 1: Add unlisted pages to index.md
79
+ # Only adds pages that exist in wiki/ but are not referenced in index.md
80
+ # Skips derived pages (queries/, sessions/)
81
+ echo "--- Checking for unlisted pages ---"
82
+ for _subdir in entities topics sources comparisons synthesis; do
83
+ for f in "$WIKI_DIR"/$_subdir/*.md; do
84
+ [ -f "$f" ] || continue
85
+ BASENAME=$(basename "$f" .md)
86
+ # Skip derived pages
87
+ case "$f" in
88
+ */queries/*|*/sessions/*) continue ;;
89
+ esac
90
+ if ! index_has_entry "$BASENAME"; then
91
+ SECTION_PATTERN=""
92
+ case "$_subdir" in
93
+ entities) SECTION_PATTERN="实体页|Entities" ;;
94
+ topics) SECTION_PATTERN="主题页|Topics" ;;
95
+ sources) SECTION_PATTERN="素材摘要|Sources" ;;
96
+ comparisons) SECTION_PATTERN="对比分析|Comparisons" ;;
97
+ synthesis) SECTION_PATTERN="综合分析|Synthesis" ;;
98
+ esac
99
+ if [ "$DRY_RUN" = true ]; then
100
+ echo " [dry-run] Would add [[$BASENAME]] under $_subdir section"
101
+ else
102
+ insert_under_section "$INDEX_FILE" "$SECTION_PATTERN" "$BASENAME"
103
+ echo " Fixed: added [[$BASENAME]] under $_subdir section"
104
+ fi
105
+ FIXED=$((FIXED + 1))
106
+ fi
107
+ done
108
+ done
109
+ [ "$FIXED" -eq 0 ] && echo " (all pages already listed)"
110
+ echo ""
111
+
112
+ echo "=== lint-fix complete: $FIXED fix(es) applied ==="
113
+ [ "$DRY_RUN" = true ] && echo "(dry-run mode — no files were modified)"
114
+ exit 0
@@ -0,0 +1,217 @@
1
+ #!/bin/bash
2
+ # lint-runner.sh — wiki 机械健康检查
3
+ # 用法:bash scripts/lint-runner.sh <wiki_root>
4
+ # 输出:结构化文本报告(供 AI 后续分析使用)
5
+ # 退出码:0 = 运行完成,1 = 脚本错误(路径不存在、wiki 结构不完整)
6
+
7
+ set -u
8
+ shopt -s nullglob
9
+
10
+ WIKI_ROOT="${1:-.}"
11
+ WIKI_DIR="$WIKI_ROOT/wiki"
12
+ INDEX_FILE="$WIKI_ROOT/index.md"
13
+
14
+ if [ ! -d "$WIKI_DIR" ]; then
15
+ echo "ERROR: wiki 目录不存在:$WIKI_DIR" >&2
16
+ echo " 请确认路径正确,或先运行 init 工作流初始化知识库。" >&2
17
+ exit 1
18
+ fi
19
+ if [ ! -f "$INDEX_FILE" ]; then
20
+ echo "ERROR: index.md 不存在:$INDEX_FILE" >&2
21
+ exit 1
22
+ fi
23
+
24
+ index_has_entry() {
25
+ local entry="$1"
26
+ grep -ohE "\[\[[^]]+\]\]" "$INDEX_FILE" 2>/dev/null | \
27
+ sed -e 's/\[\[//g' -e 's/\]\]//g' -e 's/|.*//' | \
28
+ grep -Fxq "$entry"
29
+ }
30
+
31
+ echo "=== llm-wiki lint 报告 ==="
32
+ echo "时间:$(date '+%Y-%m-%d %H:%M')"
33
+ echo "检查路径:$WIKI_DIR"
34
+ echo ""
35
+
36
+ # 检查 1:孤立页面
37
+ # 定义:entities/、topics/、sources/ 下的页面,除了自己之外没有任何其他 wiki 页面用 [[名称]] 引用它
38
+ echo "--- 孤立页面(没有被其他页面引用) ---"
39
+ _ORPHANS=0
40
+ for _subdir in entities topics sources; do
41
+ for f in "$WIKI_DIR"/$_subdir/*.md; do
42
+ [ -f "$f" ] || continue
43
+ BASENAME=$(basename "$f" .md)
44
+ if ! grep -rlF "[[$BASENAME]]" "$WIKI_DIR" 2>/dev/null | grep -vxF "$f" | grep -q .; then
45
+ echo " 孤立: $_subdir/$BASENAME"
46
+ _ORPHANS=$((_ORPHANS + 1))
47
+ fi
48
+ done
49
+ done
50
+ [ "$_ORPHANS" -eq 0 ] && echo " (无孤立页面)"
51
+ echo ""
52
+
53
+ # 检查 2:断链
54
+ # 定义:wiki/ 下的页面里有 [[X]] 链接(支持 [[X|别名]] 语法),但 wiki/ 任意子目录找不到 X.md
55
+ echo "--- 断链(被链接但不存在的页面) ---"
56
+ _TMP_BROKEN=$(mktemp)
57
+ grep -rohE "\[\[[^]]+\]\]" "$WIKI_DIR" 2>/dev/null | \
58
+ sed -e 's/\[\[//g' -e 's/\]\]//g' -e 's/|.*//' | \
59
+ sort -u | \
60
+ while read -r LINK; do
61
+ [ -z "$LINK" ] && continue
62
+ if ! find "$WIKI_DIR" -name "$LINK.md" 2>/dev/null | grep -q .; then
63
+ echo " 断链: [[$LINK]]"
64
+ echo "$LINK" >> "$_TMP_BROKEN"
65
+ fi
66
+ done
67
+ if [ ! -s "$_TMP_BROKEN" ]; then
68
+ echo " (无断链)"
69
+ fi
70
+ rm -f "$_TMP_BROKEN"
71
+ echo ""
72
+
73
+ # 检查 3:index 一致性
74
+ # 定义:index.md 里有 [[X]] 记录(去掉别名),但 wiki/ 任意子目录都找不到 X.md
75
+ echo "--- index 一致性(index.md 有记录但文件缺失) ---"
76
+ _TMP_MISSING=$(mktemp)
77
+ grep -ohE "\[\[[^]]+\]\]" "$INDEX_FILE" 2>/dev/null | \
78
+ sed -e 's/\[\[//g' -e 's/\]\]//g' -e 's/|.*//' | \
79
+ sort -u | \
80
+ while read -r ENTRY; do
81
+ [ -z "$ENTRY" ] && continue
82
+ if ! find "$WIKI_DIR" -name "$ENTRY.md" 2>/dev/null | grep -q .; then
83
+ echo " index 有但文件缺失: $ENTRY"
84
+ echo "$ENTRY" >> "$_TMP_MISSING"
85
+ fi
86
+ done
87
+ if [ ! -s "$_TMP_MISSING" ]; then
88
+ echo " (index 与文件一致)"
89
+ fi
90
+ rm -f "$_TMP_MISSING"
91
+ echo ""
92
+
93
+ # 检查 4:反向 index 一致性
94
+ # 定义:wiki/ 下实际存在的页面,但 index.md 里没有 [[页面名]] 记录
95
+ # 排除 derived 页面(queries/、synthesis/sessions/)
96
+ echo "--- 反向 index 一致性(文件存在但 index.md 未收录) ---"
97
+ _TMP_UNLISTED=$(mktemp)
98
+ for _subdir in entities topics sources comparisons synthesis; do
99
+ for f in "$WIKI_DIR"/$_subdir/*.md; do
100
+ [ -f "$f" ] || continue
101
+ BASENAME=$(basename "$f" .md)
102
+ # 跳过 derived 页面
103
+ case "$f" in
104
+ */queries/*|*/sessions/*) continue ;;
105
+ esac
106
+ if ! index_has_entry "$BASENAME"; then
107
+ echo " 未收录: $_subdir/$BASENAME"
108
+ echo "$BASENAME" >> "$_TMP_UNLISTED"
109
+ fi
110
+ done
111
+ done
112
+ if [ ! -s "$_TMP_UNLISTED" ]; then
113
+ echo " (所有页面均已收录)"
114
+ fi
115
+ rm -f "$_TMP_UNLISTED"
116
+ echo ""
117
+
118
+ # 检查 5:图片资产一致性
119
+ # 定义:source 页面 frontmatter 中 image_paths 列出的文件,在知识库中是否实际存在
120
+ # 支持 block list 格式和 inline array 格式
121
+ echo "--- 图片资产一致性(image_paths 声明但文件缺失) ---"
122
+ _IMG_ISSUES=0
123
+ for f in "$WIKI_DIR"/sources/*.md; do
124
+ [ -f "$f" ] || continue
125
+ _BASENAME=$(basename "$f" .md)
126
+ # 提取 frontmatter 中 image_paths 的值
127
+ _IN_FM=false
128
+ _IN_IMG=false
129
+ _INLINE_VAL=""
130
+ while IFS= read -r line; do
131
+ case "$line" in
132
+ "---")
133
+ if [ "$_IN_FM" = true ]; then break; fi
134
+ _IN_FM=true
135
+ continue
136
+ ;;
137
+ esac
138
+ [ "$_IN_FM" = true ] || continue
139
+ case "$line" in
140
+ image_paths:*)
141
+ # 检查是否有 inline value(如 image_paths: ["a.png", "b.jpg"])
142
+ _INLINE_VAL=$(echo "$line" | sed 's/^image_paths:[[:space:]]*//')
143
+ if [ -n "$_INLINE_VAL" ] && [ "$_INLINE_VAL" != "[]" ]; then
144
+ # 解析 inline array:去掉 [],按逗号分割
145
+ echo "$_INLINE_VAL" | tr -d '[]' | tr ',' '\n' | while IFS= read -r _ITEM; do
146
+ _PATH=$(echo "$_ITEM" | sed 's/^[[:space:]]*//' | sed 's/[[:space:]]*$//' | tr -d '"' | tr -d "'")
147
+ [ -z "$_PATH" ] && continue
148
+ if [ ! -f "$WIKI_ROOT/$_PATH" ]; then
149
+ echo " 缺失: $_BASENAME → $_PATH"
150
+ fi
151
+ done
152
+ _INLINE_COUNT=$(echo "$_INLINE_VAL" | tr -d '[]' | tr ',' '\n' | while IFS= read -r _ITEM; do
153
+ _P=$(echo "$_ITEM" | sed 's/^[[:space:]]*//' | sed 's/[[:space:]]*$//' | tr -d '"' | tr -d "'")
154
+ [ -z "$_P" ] && continue
155
+ [ ! -f "$WIKI_ROOT/$_P" ] && echo "x"
156
+ done | wc -l | tr -d ' ')
157
+ _IMG_ISSUES=$((_IMG_ISSUES + _INLINE_COUNT))
158
+ _IN_IMG=false
159
+ else
160
+ _IN_IMG=true
161
+ fi
162
+ continue
163
+ ;;
164
+ " - "*)
165
+ if [ "$_IN_IMG" = true ]; then
166
+ _PATH=$(echo "$line" | sed 's/^[[:space:]]*- //' | sed 's/^[[:space:]]*//' | sed 's/[[:space:]]*$//' | tr -d '"' | tr -d "'")
167
+ [ -z "$_PATH" ] && continue
168
+ if [ ! -f "$WIKI_ROOT/$_PATH" ]; then
169
+ echo " 缺失: $_BASENAME → $_PATH"
170
+ _IMG_ISSUES=$((_IMG_ISSUES + 1))
171
+ fi
172
+ fi
173
+ ;;
174
+ *) _IN_IMG=false ;;
175
+ esac
176
+ done < "$f"
177
+ done
178
+ [ "$_IMG_ISSUES" -eq 0 ] && echo " (无缺失图片)"
179
+ echo ""
180
+
181
+ # 检查 6:source-signal 覆盖情况
182
+ echo "--- source-signal 覆盖情况 ---"
183
+ _COVERAGE_SCRIPT="$(cd "$(dirname "$0")" && pwd)/source-signal-coverage.js"
184
+ if [ -f "$_COVERAGE_SCRIPT" ] && command -v node >/dev/null 2>&1; then
185
+ _COVERAGE_JSON=$(node "$_COVERAGE_SCRIPT" "$WIKI_ROOT" 2>/dev/null)
186
+ if [ $? -eq 0 ] && [ -n "$_COVERAGE_JSON" ]; then
187
+ node -e '
188
+ const data = JSON.parse(require("fs").readFileSync("/dev/stdin", "utf8"));
189
+ const s = data.summary;
190
+ console.log(" 已参与:" + s.ok);
191
+ console.log(" 缺少 sources 字段:" + s.missing_sources);
192
+ console.log(" sources 为空:" + s.empty_sources);
193
+ console.log(" sources 格式无效:" + s.invalid_sources);
194
+ console.log(" 当前不参与:" + s.not_applicable);
195
+ const issues = data.pages.filter(p => p.reason !== "ok" && p.reason !== "not_applicable");
196
+ if (issues.length > 0) {
197
+ const byReason = { missing_sources: [], empty_sources: [], invalid_sources: [] };
198
+ for (const p of issues) { if (byReason[p.reason]) byReason[p.reason].push(p.path); }
199
+ for (const [reason, paths] of Object.entries(byReason)) {
200
+ if (paths.length === 0) continue;
201
+ const label = { missing_sources: "缺少 sources 字段", empty_sources: "sources 为空", invalid_sources: "sources 格式无效" }[reason];
202
+ console.log("");
203
+ console.log(" " + label + ":");
204
+ for (const p of paths) console.log(" - " + p);
205
+ }
206
+ }
207
+ ' <<< "$_COVERAGE_JSON"
208
+ else
209
+ echo " (coverage 脚本执行失败,跳过覆盖检查)"
210
+ fi
211
+ else
212
+ echo " (coverage 脚本或 node 不可用,跳过覆盖检查)"
213
+ fi
214
+ echo ""
215
+
216
+ echo "=== 机械检查完成。矛盾检测、交叉引用、置信度抽查由 AI 继续执行 ==="
217
+ exit 0