@publisle/research 0.0.0-stage → 0.1.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (147) hide show
  1. package/LICENSE +21 -0
  2. package/NOTICE.md +31 -0
  3. package/README.md +14 -2
  4. package/compiler/Dockerfile +18 -0
  5. package/compiler/README.md +80 -0
  6. package/compiler/cacert.pem +2950 -0
  7. package/compiler/install-texlive.sh +38 -0
  8. package/compiler/release.json +13 -0
  9. package/dist/article.d.ts +10 -0
  10. package/dist/article.d.ts.map +1 -0
  11. package/dist/article.js +425 -0
  12. package/dist/article.js.map +1 -0
  13. package/dist/bibtex.d.ts +2 -0
  14. package/dist/bibtex.d.ts.map +1 -0
  15. package/dist/bibtex.js +2 -0
  16. package/dist/bibtex.js.map +1 -0
  17. package/dist/citeproc.d.ts +28 -0
  18. package/dist/csl.d.ts +35 -0
  19. package/dist/csl.d.ts.map +1 -0
  20. package/dist/csl.js +315 -0
  21. package/dist/csl.js.map +1 -0
  22. package/dist/index.d.ts +13 -0
  23. package/dist/index.d.ts.map +1 -0
  24. package/dist/index.js +12 -0
  25. package/dist/index.js.map +1 -0
  26. package/dist/jats.d.ts +14 -0
  27. package/dist/jats.d.ts.map +1 -0
  28. package/dist/jats.js +197 -0
  29. package/dist/jats.js.map +1 -0
  30. package/dist/latex.d.ts +5 -0
  31. package/dist/latex.d.ts.map +1 -0
  32. package/dist/latex.js +19 -0
  33. package/dist/latex.js.map +1 -0
  34. package/dist/locales.d.ts +2 -0
  35. package/dist/locales.d.ts.map +1 -0
  36. package/dist/locales.js +67 -0
  37. package/dist/locales.js.map +1 -0
  38. package/dist/node.d.ts +66 -0
  39. package/dist/node.d.ts.map +1 -0
  40. package/dist/node.js +542 -0
  41. package/dist/node.js.map +1 -0
  42. package/dist/package.d.ts +19 -0
  43. package/dist/package.d.ts.map +1 -0
  44. package/dist/package.js +48 -0
  45. package/dist/package.js.map +1 -0
  46. package/dist/pdf.d.ts +10 -0
  47. package/dist/pdf.d.ts.map +1 -0
  48. package/dist/pdf.js +207 -0
  49. package/dist/pdf.js.map +1 -0
  50. package/dist/portable-citations.d.ts +27 -0
  51. package/dist/portable-citations.d.ts.map +1 -0
  52. package/dist/portable-citations.js +185 -0
  53. package/dist/portable-citations.js.map +1 -0
  54. package/dist/profiles.d.ts +10 -0
  55. package/dist/profiles.d.ts.map +1 -0
  56. package/dist/profiles.js +166 -0
  57. package/dist/profiles.js.map +1 -0
  58. package/dist/remote.d.ts +24 -0
  59. package/dist/remote.d.ts.map +1 -0
  60. package/dist/remote.js +139 -0
  61. package/dist/remote.js.map +1 -0
  62. package/dist/resolve.d.ts +10 -0
  63. package/dist/resolve.d.ts.map +1 -0
  64. package/dist/resolve.js +62 -0
  65. package/dist/resolve.js.map +1 -0
  66. package/package.json +53 -3
  67. package/src/article.ts +478 -0
  68. package/src/bibtex.ts +1 -0
  69. package/src/citeproc.d.ts +28 -0
  70. package/src/csl.ts +367 -0
  71. package/src/index.ts +29 -0
  72. package/src/jats.ts +242 -0
  73. package/src/latex.ts +21 -0
  74. package/src/locales.ts +126 -0
  75. package/src/node.ts +752 -0
  76. package/src/package.ts +83 -0
  77. package/src/pdf.ts +225 -0
  78. package/src/portable-citations.ts +250 -0
  79. package/src/profiles.ts +188 -0
  80. package/src/remote.ts +163 -0
  81. package/src/resolve.ts +91 -0
  82. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/BITS-embedded-index2.ent +308 -0
  83. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/BITS-question-answer2.ent +531 -0
  84. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-XHTMLtablesetup1-3.ent +629 -0
  85. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-ali-namespace1-3.ent +293 -0
  86. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-archivearticle1-3.dtd +1085 -0
  87. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-archivecustom-classes1-3.ent +409 -0
  88. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-archivecustom-mixes1-3.ent +601 -0
  89. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-archivecustom-models1-3.ent +1613 -0
  90. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-archivecustom-modules1-3.ent +404 -0
  91. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-articlemeta1-3.ent +2552 -0
  92. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-backmatter1-3.ent +540 -0
  93. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-chars1-3.ent +664 -0
  94. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-common-atts1-3.ent +360 -0
  95. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-common1-3.ent +4659 -0
  96. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-default-classes1-3.ent +1595 -0
  97. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-default-mixes1-3.ent +630 -0
  98. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-display1-3.ent +1299 -0
  99. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-format1-3.ent +997 -0
  100. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-funding1-3.ent +1100 -0
  101. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-journalmeta1-3.ent +593 -0
  102. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-link1-3.ent +604 -0
  103. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-list1-3.ent +663 -0
  104. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-math1-3.ent +563 -0
  105. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-mathmlsetup1-3.ent +491 -0
  106. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-modules1-3.ent +769 -0
  107. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-nlmcitation1-3.ent +428 -0
  108. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-notat1-3.ent +412 -0
  109. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-para1-3.ent +648 -0
  110. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-phrase1-3.ent +664 -0
  111. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-references1-3.ent +1428 -0
  112. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-related-object1-3.ent +435 -0
  113. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-section1-3.ent +463 -0
  114. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-xmlspecchars1-3.ent +528 -0
  115. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/catalog-jats-v1-3-no-base.xml +999 -0
  116. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/catalog-jats-v1-3-with-base.xml +986 -0
  117. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isobox.ent +61 -0
  118. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isocyr1.ent +88 -0
  119. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isocyr2.ent +47 -0
  120. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isodia.ent +35 -0
  121. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isolat1.ent +83 -0
  122. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isolat2.ent +142 -0
  123. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isonum.ent +97 -0
  124. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isopub.ent +105 -0
  125. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamsa.ent +167 -0
  126. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamsb.ent +143 -0
  127. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamsc.ent +43 -0
  128. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamsn.ent +114 -0
  129. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamso.ent +73 -0
  130. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamsr.ent +204 -0
  131. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isogrk3.ent +64 -0
  132. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isomfrk.ent +75 -0
  133. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isomopf.ent +49 -0
  134. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isomscr.ent +75 -0
  135. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isotech.ent +182 -0
  136. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/mathml/mmlalias.ent +564 -0
  137. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/mathml/mmlextra.ent +122 -0
  138. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/mathml2-qname-1.mod +286 -0
  139. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/mathml2.dtd +2206 -0
  140. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/xhtml-inlstyle-1.mod +34 -0
  141. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/xhtml-table-1.mod +333 -0
  142. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/xmlchars/isogrk1.ent +70 -0
  143. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/xmlchars/isogrk2.ent +41 -0
  144. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/xmlchars/isogrk4.ent +66 -0
  145. package/vendor/jats/PROVENANCE.json +6 -0
  146. package/vendor/locales/PROVENANCE.json +5 -0
  147. package/vendor/locales/README.md +23 -0
@@ -0,0 +1,664 @@
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+ <!-- ============================================================= -->
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+ <!-- MODULE: Subject Phrase Class Elements -->
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+ <!-- VERSION: ANSI/NISO JATS Version 1.3 (Z39.96-2021) -->
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+ <!-- DATE: June 2021 -->
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+ <!-- -->
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+ <!-- ============================================================= -->
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+
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+ <!-- ============================================================= -->
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+ <!-- PUBLIC DOCUMENT TYPE DEFINITION -->
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+ <!-- TYPICAL INVOCATION -->
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+ <!--
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+ "-//NLM//DTD JATS (Z39.96) JATS DTD Suite Subject Phrase Class Elements v1.3 20210610//EN"
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+ Delivered as file "JATS-phrase1-3.ent" -->
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+ <!-- ============================================================= -->
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+
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+ <!-- ============================================================= -->
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+ <!-- SYSTEM: JATS DTD Suite -->
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+ <!-- -->
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+ <!-- PURPOSE: Defines the phrase.class, that is, names the -->
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+ <!-- inline, subject-specific elements -->
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+ <!-- -->
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+ <!-- If more specific subject words (such as "gene") -->
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+ <!-- are added to later version of this DTD, they -->
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+ <!-- should be added to the %phrase.class; entity and -->
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+ <!-- defined in this module or in %common.ent; -->
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+ <!-- -->
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+ <!-- TAG SET SPONSOR -->
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+ <!-- National Center for Biotechnology -->
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+ <!-- Information (NCBI) -->
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+ <!-- National Library of Medicine (NLM) -->
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+ <!-- -->
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+ <!-- CREATED FOR: -->
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+ <!-- This module was created for the JATS DTD Suite. -->
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+ <!-- Digital archives and publishers may use the -->
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+ <!-- DTD as is for markup of journal literature or -->
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+ <!-- related material for archiving and transferring -->
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+ <!-- such material between archives or create a -->
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+ <!-- custom XML DTD from the Suite for -->
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+ <!-- these purposes. -->
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+ <!-- -->
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+ <!-- This DTD is in the public domain. An organization -->
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+ <!-- that wishes to create its own DTD from the suite -->
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+ <!-- may do so without permission from NLM. -->
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+ <!-- -->
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+ <!-- The suite has been set up to be extended using a -->
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+ <!-- new DTD file and a new DTD-specific customization -->
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+ <!-- module to redefine the many Parameter Entities. -->
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+ <!-- Do not modify the suite directly or redistribute -->
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+ <!-- modified versions of the suite. -->
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+ <!-- -->
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+ <!-- In the interest of maintaining consistency and -->
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+ <!-- clarity for potential users, NLM requests: -->
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+ <!-- -->
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+ <!-- 1. If you create a DTD from the JATS DTD Suite -->
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+ <!-- and intend to stay compatible with the suite, -->
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+ <!-- then please include the following statement -->
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+ <!-- as a comment in all of your DTD modules: -->
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+ <!-- "Created from, and fully compatible with, -->
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+ <!-- the ANSI/NISO Z39.96 Journal Article Tag -->
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+ <!-- Suite (JATS)." -->
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+ <!-- -->
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+ <!-- 2. If you alter one or more modules of the suite, -->
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+ <!-- then please rename your version and all its -->
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+ <!-- modules to avoid any confusion with the -->
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+ <!-- original suite. Also, please include the -->
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+ <!-- following statement as a comment in all your -->
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+ <!-- DTD modules: -->
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+ <!-- "Based in part on, but not fully compatible -->
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+ <!-- with, the ANSI/NISO Z39.96 Journal Article -->
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+ <!-- Tag Suite (JATS)." -->
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+ <!-- -->
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+ <!-- Suggestions for refinements and enhancements to -->
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+ <!-- the DTD suite should be sent in email to: -->
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+ <!-- jats@ncbi.nlm.nih.gov -->
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+ <!-- -->
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+ <!-- ORIGINAL CREATION DATE: -->
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+ <!-- December 2002 -->
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+ <!-- -->
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+ <!-- CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96 -->
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+ <!-- Working Group. Mulberry Technologies was -->
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+ <!-- supported by National Center for Biotechnology -->
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+ <!-- Information (NCBI), a center of the US National -->
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+ <!-- Library of Medicine (NLM). -->
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+ <!-- -->
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+ <!-- This module is part of the JATS DTD Suite. The -->
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+ <!-- Suite is a continuation of work done by NCBI, -->
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+ <!-- Mulberry Technologies, and Inera Inc. on the NLM -->
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+ <!-- Journal Archiving and Interchange DTD Suite, which-->
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+ <!-- was originally released in December, 2002. -->
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+ <!-- -->
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+ <!-- NLM thanks the Harvard University Libraries, both -->
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+ <!-- for proposing that a draft archiving NLM DTD for -->
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+ <!-- life sciences journals be extended to accommodate -->
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+ <!-- journals in all disciplines and for sponsoring -->
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+ <!-- Inera Inc.'s collaboration with other DTD -->
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+ <!-- authors in completing NLM Version 1.0. The -->
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+ <!-- Andrew W. Mellon Foundation provided support for -->
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+ <!-- these important contributions. -->
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+ <!-- -->
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+ <!-- Suggestions for refinements and enhancements to -->
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+ <!-- this DTD should be sent in email to: -->
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+ <!-- jats@ncbi.nlm.nih.gov -->
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+ <!-- ============================================================= -->
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+
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+
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+ <!-- ============================================================= -->
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+ <!-- DTD VERSION/CHANGE HISTORY -->
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+ <!-- ============================================================= -->
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+ <!--
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+ Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
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+ ==============================================================
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+ JATS Version 1.3 (ANSI/NISO Z39.96-2021)
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+ (DAL/BTU) v1.3 (2021-06-10)
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+
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+ ANSI NISO JATS is a continuing maintenance NISO Standard,
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+ which requires voting by both the NISO and ANSI memberships
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+ to be changed. This version of the NISO JATS was approved
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+ by ANSI vote on June 10, 2021, so it supersedes all Committee
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+ Drafts as well as the draft version JATS 1.3 2021 (the version
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+ submitted for vote), becoming NISO JATS v1.3 20210610
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+ (ANSI/NISO Z39.96-2019).
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+
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+ The file names and formal public identifiers have been
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+ changed in the modules and the catalogs.
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+
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+ 23. JATS 'v1.3d2 20201130' becomes 'v1.3 20210610'
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+ (final ANSI vote date)
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+ 'ANSI/NISO Z39.96-2019' becomes 'ANSI/NISO Z39.96-2021'
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+
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+ ==============================================================
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+ JATS Version 1.3d2 (ANSI/NISO Z39.96-2021)
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+ (DAL/BTU) v1.3d2 (2020-11-30)
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+
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+ ANSI NISO JATS is a continuing maintenance NISO Standard,
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+ which requires voting by the NISO and ANSI memberships
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+ to be changed.
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+
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+ This draft DTD represents an interim version of the
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+ non-normative JATS DTD Suite, as an indication to JATS users
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+ of the decisions that have been made by the JATS Standing
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+ Committee. This draft has not yet been given public review
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+ or voting; it is for Standing Committee review and
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+ testing. The formal public identifiers have been changed
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+ in the modules and the catalogs.
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+
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+ 22. JATS "v1.3d2 20201130" becomes 'v1.3 20210610' (second
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+ committee draft following the final ANSI/NISO 1.2 vote)
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+
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+ ==============================================================
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+ JATS Version 1.3d1 (ANSI/NISO Z39.96-2021)
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+ (DAL/BTU) v1.3.d1 (2019-08-31)
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+
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+ ANSI NISO JATS is a continuing maintenance NISO Standard,
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+ which requires voting by the NISO and ANSI memberships
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+ to be changed.
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+
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+ This draft DTD represents an interim version of the
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+ non-normative JATS DTD Suite, as an indication to JATS users
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+ of the decisions that have been made by the JATS Standing
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+ Committee. This draft has not yet been given public review
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+ or voting. The formal public identifiers were changed in the
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+ modules and the catalogs.
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+
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+ 21. JATS "1.2" becomes "v1.3d1 20190831" (first committee
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+ draft following the final ANSI/NISO vote)
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+
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+ ==============================================================
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+ JATS Version 1.2 (ANSI/NISO Z39.96-2021)
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+ (DAL/BTU) v1.2 (2019-02-08)
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+
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+ NISO JATS is a continuing maintenance NISO Standard, which
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+ requires voting by the both the NISO and ANSI membership
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+ to be changed. This version of the NISO JATS was approved
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+ by ANSI vote on Feb 08, 2019, so it supersedes all Committee
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+ Drafts as well as the draft version JATS 1.2 2018 (the version
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+ submitted for vote), becoming NISO JATS v1.2 20190208
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+ (ANSI/NISO Z39.96-2021).
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+
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+ 20. JATS "1.2" becomes "v1.2 20190208" (final ANSI vote date)
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+ "ANSI/NISO Z39.96-2015" becomes "ANSI/NISO Z39.96-2019"
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+
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+ ==============================================================
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+ JATS Version 1.2 (ANSI/NISO Z39.96-2018)
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+
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+ (DAL/BTU) v1.2 (2018-11-30)
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+
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+ NISO JATS is a continuing maintenance NISO Standard, which
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+ requires voting by the both the NISO and ANSI membership
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+ to be changed. This version of the NISO JATS was approved
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+ by ANSI and NISO vote, so it supersedes all Committee Drafts
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+ and becoming NISO JATS 1.2 (ANSI/NISO Z39.96-2018).
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+
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+ 19.
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+ JATS "1.2d2" and "v1.2d2 20180401" became
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+ JATS "1.2" and "v1.2 20181130"
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+
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+ =============================================================
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+
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+ JATS Version 1.2d2 (DAL/BTU) v1.2d2 (2018-04-01)
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+
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+ JATS is a continuing maintenance NISO Standard, which
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+ requires voting by the ANSI and NISO memberships to be changed.
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+ BITS is under continuous maintenance, and is modified at the
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+ discretion of the working group.
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+
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+ This draft DTD represents an interim version of the
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+ non-normative JATS DTD Suite, as an indication to JATS users
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+ the decisions that have been made by the JATS Standing
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+ Committee. This draft has not yet been given public review
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+ or voting. The formal public identifiers were changed in the
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+ modules and the catalogs.
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+
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+ 18. BITS "2.0" and "v2.0 20151225" remain unchanged
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+
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+
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+ JATS "1.2d1" and "v1.2d1 20171231" became
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+ JATS "1.2d2" and "v1.2d2 20180401".
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+
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+ No module names were changed.
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+
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+ =============================================================
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+ JATS Version 1.2d1 (ANSI/NISO Z39.96-2015)
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+ (DAL/BTU) v1.2d1 (2017-12-31)
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+
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+ NISO JATS is a continuing maintenance NISO Standard, which
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+ requires voting by the ANSI and NISO memberships to be changed.
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+
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+ This draft DTD represents an interim version of the
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+ non-normative JATS DTD Suite, as an indication to JATS users
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+ the decisions that have been made by the JATS Standing
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+ Committee. This draft has not yet been given public review
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+ or voting. The formal public identifiers were changed in the
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+ modules and the catalogs.
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+
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+ 17. JATS "1.2d1" and "v1.2d1 20170631" became
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+ JATS "1.2d1" and "v1.2d1 20171231".
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+
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+ =============================================================
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+ JATS Version 1.2d1 (DAL/BTU) v1.2d1 (2017-06-31)
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+
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+ NISO JATS is a continuing maintenance NISO Standard, which
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+ requires voting by the ANSI and NISO memberships to be changed.
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+
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+ This draft DTD represents an interim version of the
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+ non-normative JATS DTD Suite, as an indication to JATS users
246
+ the decisions that have been made by the JATS Standing
247
+ Committee. This draft has not yet been given public review
248
+ or voting. The formal public identifiers were changed in the
249
+ modules and the catalogs.
250
+
251
+ 16. STYLED CONTENT - Added new @style-detail attribute to
252
+ <styled-content>, to account for dots, sesamis, and
253
+ other non-western emphasis.
254
+
255
+ 15. VOCABULARY/TAXONOMY ATTRIBUTES - Added 4 new attributes for
256
+ naming (and possibly linking to) a general or controlled
257
+ taxonomy, vocabulary, index, database or other source of
258
+ terms: @vocab, @vocab-identifier, @vocab-term, and
259
+ @vocab-term-identifier
260
+ - All 4 added to <named-content>, to name a vocabulary
261
+ as the source of the content being identified
262
+
263
+ 14. JATS became version "1.2d1" and "v1.2d1 20170631"
264
+
265
+ =============================================================
266
+ JATS Version 1.1 (DAL/BTU) v1.1 (2015-12-15)
267
+
268
+ JATS is a continuing maintenance NISO Standard, which
269
+ requires voting by the ANSI and NISO memberships to be changed.
270
+ JATS 1.1 was approved in late 2015, so the formal public
271
+ identifiers were changed in the modules and the catalogs.
272
+ No model or attribute changes were made at this time.
273
+
274
+ 13. JATS became version "1.1" and "v1.1 20151215"
275
+ BITS remained version "2.0" but becomes "v2.0 20151225"
276
+
277
+ =============================================================
278
+ JATS Version 1.1d3 (DAL/BTU) v1.1d3 (2015-03-01)
279
+
280
+ The changes in this release are in response to NISO
281
+ License and Indicators Recommended Practice.
282
+
283
+ NISO JATS is a continuing maintenance NISO Standard, which
284
+ requires voting by the NISO membership to be changed. This
285
+ Committee Draft 1.1d3 will be sent to the NISO voting
286
+ membership, to become (if approved) NISO JATS 1.1.
287
+
288
+ This draft DTD represents an interim version of the
289
+ non-normative JATS DTD Suite, as an indication to JATS users
290
+ the decisions that have been made by the JATS Standing
291
+ Committee.
292
+
293
+ 12. JATS became version "1.1d3" and "v1.1 20150301//EN"
294
+
295
+ =============================================================
296
+ JATS Version 1.1d2 (DAL/BTU) v1.1d2 (2014-09-30)
297
+
298
+ NISO JATS is a continuing maintenance NISO Standard, which
299
+ requires voting by the NISO membership to be changed. This
300
+ Committee Draft 1.1d2 will be sent to the NISO voting
301
+ membership, to become (if approved) NISO JATS 1.1.
302
+
303
+ This catalog represents an interim version of the
304
+ non-normative JATS DTD Suite, as an indication to JATS users
305
+ the decisions that have been made by the JATS Standing
306
+ Committee.
307
+
308
+ 11. JATS became version "1.1d2" and "v1.1d2 20140930//EN"
309
+
310
+ =============================================================
311
+ NISO JATS Version 1.1d1 (DAL/BTU) v1.1 (2013-11-15)
312
+
313
+ ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1d1)
314
+
315
+ NISO JATS Standing Committee met and answered the requests and
316
+ suggestions from the NISO request forms.
317
+
318
+ Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,
319
+ XSDs, RNGs and supporting documentation are available at
320
+ http://jats.nlm.nih.gov/1.3d2/
321
+
322
+ 10. GLOBAL ATTRIBUTES - Added the new parameter entity
323
+ %jats-common-atts;
324
+ to every element in this module. This PE adds (for now) the
325
+ @id attribute and the @xml:base attribute to every element,
326
+ whether metadata or narrative.
327
+ Since the @id in this parameter entity is optional, a second
328
+ parameter entity jats-common-atts-id-required was also added.
329
+ The two are kept in sync with the jats-base-atts parameter
330
+ entity.
331
+
332
+ =============================================================
333
+ NISO JATS Version 1.0 (DAL/BTU) v1.0 (2012-xx-xx)
334
+
335
+ ANSI/NISO Z39.96-2012 (Version 1.0)
336
+
337
+ Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,
338
+ XSDs, RNGs and supporting documentation are available at
339
+ http://jats.nlm.nih.gov/1.3d2/
340
+
341
+ 9. NAMED CONTENT ATTRIBUTE - Added @rid to the attributes of
342
+ <named-content>.
343
+
344
+ 8. Updated the DTD-version attribute to "1.0" and the formal
345
+ public identifier to the date: "v1.0 20120330//EN".
346
+
347
+ =============================================================
348
+ Version 0.4 (DAL/BTU) v0.4 (2011-01-31)
349
+
350
+ This Tag Set is in the process of becoming a NISO standard.
351
+ The version numbers are starting over from 0.4", as a Trial
352
+ Use Draft, to be made into "Version 1.0" when the Tag Suite
353
+ becomes a NISO standard. Thus, the version number that would
354
+ have been "NLM Version 3.1 Draft" has become NISO JATS
355
+ "Version 0.4".
356
+
357
+ Details on NISO Trial Use Draft Version 0.4 are available at
358
+ http://jats.nlm.nih.gov/JATS-0.4.
359
+
360
+ 7. Updated the DTD-version attribute to "0.4"
361
+
362
+ 6. Updated the public identifier to "v0.4 20110131",
363
+ modified the formal public identifier to include "JATS (Z39.96)",
364
+ and the filename as delivered to include "JATS" and the
365
+ new version number "0".
366
+
367
+ 5. MILESTONE END ATTRIBUTES - The new parameter entity
368
+ %milestone-end-atts; now uses %milestone-atts;, as it used to,
369
+ for compatibility purposes. This had not been done.
370
+
371
+ 4. ACCESSIBILITY- Added @alt to
372
+ - <abbrev> through %abbrev-atts;
373
+ - <named-content> through %named-content-atts;
374
+ - <styled-content> through %styled-content-atts:
375
+
376
+ 3. @SPECIFIC-USE and @XML:LANG - Added the @specific-use and
377
+ @xml:lang to the following elements:
378
+ - abbrev through abbrev-atts (both)
379
+ - milestone-start through milestone-atts (@xml:lang only;
380
+ @specific-use already)
381
+ - milestone-end through milestone-end-atts (both)
382
+ - named-content through named-content-atts (@xml:lang only;
383
+ @specific-use already)
384
+ - styled-content through styled-content-atts (@xml:lang only;
385
+ @specific-use already)
386
+
387
+ 2. MILESTONE - The attribute list for <milestone-start> was
388
+ named milestone-atts not milestone-start-atts. Added the
389
+ new PE milestone-start-atts, but set it to the value of
390
+ milestone-atts so as not to break customizations.
391
+
392
+ =============================================================
393
+ Version 3.0 (DAL/BTU) v3.0 (2007-10-31)
394
+
395
+ Version 3.0 is the first non-backward-compatible release.
396
+ In addition to the usual incremental changes, some
397
+ elements and attributes have been renamed and/or remodeled
398
+ to better meet user needs and to increase tag set consistency.
399
+ All module change histories are available through the Tag Suite
400
+ web site at http://dtd.nlm.nih.gov.
401
+
402
+ Details on version 3.0 are available at
403
+ http://dtd.nlm.nih.gov/3.0.
404
+
405
+ 1. Updated public identifier to "v3.0 20071031//EN" -->
406
+
407
+ <!-- ============================================================= -->
408
+ <!-- Details concerning
409
+ ANSI/NISO Z39.96-2015 JATS-based DTDs, XSDs,
410
+ RNGs and supporting documentation are available at
411
+ http://jats.nlm.nih.gov/1.1/ -->
412
+
413
+ <!-- ============================================================= -->
414
+ <!-- PARAMETER ENTITIES FOR ATTRIBUTE LISTS -->
415
+ <!-- ============================================================= -->
416
+
417
+
418
+ <!-- ABBREVIATION ATTRIBUTES -->
419
+ <!-- Attributes for the <abbrev> element -->
420
+ <!ENTITY % abbrev-atts
421
+ "%jats-common-atts;
422
+ content-type
423
+ CDATA #IMPLIED
424
+ specific-use
425
+ CDATA #IMPLIED
426
+ alt CDATA #IMPLIED
427
+ xml:lang NMTOKEN #IMPLIED
428
+ %might-link-atts;" >
429
+
430
+
431
+ <!-- MILESTONE ATTRIBUTES -->
432
+ <!-- Attributes for both the <milestone-start>
433
+ and <milestone-end> elements -->
434
+ <!ENTITY % milestone-atts
435
+ "%jats-common-atts;
436
+ rid IDREF #IMPLIED
437
+ content-type
438
+ CDATA #IMPLIED
439
+ rationale CDATA #IMPLIED
440
+ specific-use
441
+ CDATA #IMPLIED
442
+ xml:lang NMTOKEN #IMPLIED" >
443
+
444
+
445
+ <!-- MILESTONE START ATTRIBUTES -->
446
+ <!-- Attributes for the <milestone-start>
447
+ element -->
448
+ <!ENTITY % milestone-start-atts
449
+ "%milestone-atts;" >
450
+
451
+
452
+ <!-- MILESTONE END ATTRIBUTES -->
453
+ <!-- Attributes for the <milestone-end>
454
+ element -->
455
+ <!ENTITY % milestone-end-atts
456
+ "%milestone-atts;" >
457
+
458
+
459
+ <!-- NAMED CONTENT ATTRIBUTES -->
460
+ <!-- Attributes for the <named-content> element -->
461
+ <!ENTITY % named-content-atts
462
+ "%jats-common-atts;
463
+ rid IDREFS #IMPLIED
464
+ alt CDATA #IMPLIED
465
+ content-type
466
+ CDATA #REQUIRED
467
+ vocab CDATA #IMPLIED
468
+ vocab-identifier
469
+ CDATA #IMPLIED
470
+ vocab-term CDATA #IMPLIED
471
+ vocab-term-identifier
472
+ CDATA #IMPLIED
473
+ specific-use
474
+ CDATA #IMPLIED
475
+ xml:lang NMTOKEN #IMPLIED
476
+ %might-link-atts;" >
477
+
478
+
479
+ <!-- STYLED CONTENT ATTRIBUTES -->
480
+ <!-- Attributes for the <styled-content> element-->
481
+ <!ENTITY % styled-content-atts
482
+ "%jats-common-atts;
483
+ toggle (yes | no) #IMPLIED
484
+ style CDATA #IMPLIED
485
+ style-type CDATA #IMPLIED
486
+ style-detail
487
+ CDATA #IMPLIED
488
+ alt CDATA #IMPLIED
489
+ specific-use
490
+ CDATA #IMPLIED
491
+ xml:lang NMTOKEN #IMPLIED" >
492
+
493
+
494
+ <!-- ============================================================= -->
495
+ <!-- PHRASE-LEVEL ELEMENTS -->
496
+ <!-- ============================================================= -->
497
+
498
+
499
+ <!-- ABBREVIATION ELEMENTS -->
500
+ <!-- Elements for use in the <abbrev> element -->
501
+ <!ENTITY % abbrev-elements
502
+ "| %def.class;" >
503
+
504
+
505
+ <!-- ABBREVIATION OR ACRONYM -->
506
+ <!-- Used to identify an abbreviation or acronym
507
+ Details at:
508
+ http://jats.nlm.nih.gov/archiving/tag-library/1.3/index.html?elem=abbrev
509
+ http://jats.nlm.nih.gov/publishing/tag-library/1.3/index.html?elem=abbrev
510
+ http://jats.nlm.nih.gov/articleauthoring/tag-library/1.3/index.html?elem=abbrev
511
+ -->
512
+ <!ELEMENT abbrev (#PCDATA %abbrev-elements;)* >
513
+ <!ATTLIST abbrev
514
+ %abbrev-atts; >
515
+
516
+
517
+ <!-- ============================================================= -->
518
+ <!-- MILESTONE ELEMENTS -->
519
+ <!-- ============================================================= -->
520
+
521
+
522
+ <!-- MILESTONE MODEL -->
523
+ <!-- Model for both the <milestone-start> and
524
+ <milestone-end> elements -->
525
+ <!ENTITY % milestone-model
526
+ "EMPTY" >
527
+
528
+
529
+ <!-- MILESTONE START MODEL -->
530
+ <!-- Model for the both the <milestone-start>
531
+ element -->
532
+ <!ENTITY % milestone-start-model
533
+ "%milestone-model;" >
534
+
535
+
536
+ <!-- MILESTONE START -->
537
+ <!-- Used to mark the start of a non-hierarchically
538
+ nested object, that is, a textual component
539
+ which cannot be expressed in the normal
540
+ non-overlapping, OCHO structure of an XML
541
+ document. When this element is used, it is
542
+ assumed that the end of the textual
543
+ component will be marked with a
544
+ <milestone-end> element.
545
+ Details at:
546
+ http://jats.nlm.nih.gov/archiving/tag-library/1.3/index.html?elem=milestone-start
547
+ http://jats.nlm.nih.gov/publishing/tag-library/1.3/index.html?elem=milestone-start
548
+ -->
549
+ <!ELEMENT milestone-start
550
+ %milestone-start-model; >
551
+ <!ATTLIST milestone-start
552
+ %milestone-start-atts; >
553
+
554
+
555
+ <!-- MILESTONE END MODEL -->
556
+ <!-- Model for the both the <milestone-end>
557
+ element -->
558
+ <!ENTITY % milestone-end-model
559
+ "%milestone-model;" >
560
+
561
+
562
+ <!-- MILESTONE END -->
563
+ <!-- Used to mark the end of a non-hierarchically
564
+ nested object, that is, a textual component
565
+ which cannot be expressed in the normal
566
+ non-overlapping, OCHO structure of an XML
567
+ document. When this element is used, it is
568
+ assumed that the start of the textual
569
+ component was marked with a <milestone-start>
570
+ element.
571
+ Details at:
572
+ http://jats.nlm.nih.gov/archiving/tag-library/1.3/index.html?elem=milestone-end
573
+ http://jats.nlm.nih.gov/publishing/tag-library/1.3/index.html?elem=milestone-end
574
+ -->
575
+ <!ELEMENT milestone-end
576
+ %milestone-end-model; >
577
+ <!ATTLIST milestone-end
578
+ %milestone-end-atts; >
579
+
580
+
581
+ <!-- ============================================================= -->
582
+ <!-- NAMED CONTENT ELEMENTS -->
583
+ <!-- ============================================================= -->
584
+
585
+
586
+ <!-- NAMED CONTENT ELEMENTS -->
587
+ <!-- The elements that can be included along with
588
+ data characters inside the content model of
589
+ the <named-content> element -->
590
+ <!ENTITY % named-content-elements
591
+ "| %address-link.class; |
592
+ %article-link.class; |
593
+ %block-display.class; | %block-math.class;|
594
+ %emphasis.class; |
595
+ %inline-display-noalt.class; |
596
+ %inline-math.class; | %list.class; |
597
+ %math.class; | %phrase.class; |
598
+ %simple-link.class; |
599
+ %subsup.class; | %rest-of-para.class;" >
600
+
601
+
602
+ <!-- NAMED SPECIAL (SUBJECT) CONTENT -->
603
+ <!-- A semantically distinct word or phrase
604
+ within the text. Often such phrases are
605
+ treated differently, for example, given a
606
+ different typographic style or look, to call
607
+ attention to the subject matter. For
608
+ example, the word is a drug name or a
609
+ gene or the phrase identifies an organism
610
+ genus/species.
611
+ Details at:
612
+ http://jats.nlm.nih.gov/archiving/tag-library/1.3/index.html?elem=named-content
613
+ http://jats.nlm.nih.gov/publishing/tag-library/1.3/index.html?elem=named-content
614
+ http://jats.nlm.nih.gov/articleauthoring/tag-library/1.3/index.html?elem=named-content
615
+ -->
616
+ <!ELEMENT named-content
617
+ (#PCDATA %named-content-elements;)* >
618
+ <!ATTLIST named-content
619
+ %named-content-atts; >
620
+
621
+
622
+ <!-- ============================================================= -->
623
+ <!-- STYLED CONTENT ELEMENTS -->
624
+ <!-- ============================================================= -->
625
+
626
+
627
+ <!-- STYLED CONTENT ELEMENTS -->
628
+ <!-- The elements that can be included along with
629
+ data characters inside the content model of
630
+ the <styled-content> element -->
631
+ <!ENTITY % styled-content-elements
632
+ "| %address-link.class; |
633
+ %article-link.class; |
634
+ %block-display.class; | %block-math.class;|
635
+ %emphasis.class; |
636
+ %inline-display-noalt.class; |
637
+ %inline-math.class; | %list.class; |
638
+ %math.class; | %phrase.class; |
639
+ %simple-link.class; |
640
+ %subsup.class; | %rest-of-para.class;" >
641
+
642
+
643
+ <!-- STYLED SPECIAL (SUBJECT) CONTENT -->
644
+ <!-- A stylistically distinct word or phrase
645
+ within the text, that cannot be tagged using
646
+ any of the other mechanisms for such content.
647
+ In other words: the content cannot be
648
+ described with bold, italic, monospace or any
649
+ of the other emphasis class elements and
650
+ <named-content> is inappropriate because the
651
+ semantic reason behind the typographic
652
+ distinction is not clear.
653
+ Details at:
654
+ http://jats.nlm.nih.gov/archiving/tag-library/1.3/index.html?elem=styled-content
655
+ http://jats.nlm.nih.gov/publishing/tag-library/1.3/index.html?elem=styled-content
656
+ http://jats.nlm.nih.gov/articleauthoring/tag-library/1.3/index.html?elem=styled-content
657
+ -->
658
+ <!ELEMENT styled-content
659
+ (#PCDATA %styled-content-elements;)* >
660
+ <!ATTLIST styled-content
661
+ %styled-content-atts; >
662
+
663
+
664
+ <!-- ================== End Phrase Class Module ================== -->