@platforma-open/milaboratories.repertoire-diversity-2.model 1.5.4 → 1.5.6
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.turbo/turbo-build.log +13 -28
- package/.turbo/turbo-lint.log +5 -0
- package/.turbo/turbo-type-check.log +6 -0
- package/CHANGELOG.md +12 -0
- package/dist/bundle.js +8166 -7256
- package/dist/bundle.js.map +1 -1
- package/dist/converters.cjs +13 -0
- package/dist/converters.cjs.map +1 -0
- package/dist/converters.d.ts +3 -0
- package/dist/converters.d.ts.map +1 -0
- package/dist/converters.js +11 -0
- package/dist/converters.js.map +1 -0
- package/dist/index.cjs +106 -110
- package/dist/index.cjs.map +1 -1
- package/dist/index.d.ts +36 -30
- package/dist/index.d.ts.map +1 -0
- package/dist/index.js +106 -110
- package/dist/index.js.map +1 -1
- package/dist/model.json +1 -1
- package/package.json +28 -28
- package/src/index.ts +11 -9
- package/tsconfig.json +1 -12
- package/vitest.config.mts +9 -0
- package/dist/index.d.cts +0 -76
- package/vite.config.mts +0 -20
package/package.json
CHANGED
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@@ -1,39 +1,39 @@
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{
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"name": "@platforma-open/milaboratories.repertoire-diversity-2.model",
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"version": "1.5.
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"version": "1.5.6",
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"description": "Block model",
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"type": "module",
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"main": "dist/index.cjs",
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"module": "dist/index.js",
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"types": "dist/index.d.ts",
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"main": "./dist/index.cjs",
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"module": "./dist/index.js",
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"types": "./dist/index.d.ts",
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"exports": {
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".": {
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"import": "./dist/index.js",
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"require": "./dist/index.cjs",
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"types": "./dist/index.d.ts",
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"sources": "./src/index.ts"
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},
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"./dist/model.json": "./dist/model.json"
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},
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"dependencies": {
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"@platforma-sdk/model": "
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"@milaboratories/graph-maker": "
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"@platforma-sdk/model": "1.51.2",
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"@milaboratories/graph-maker": "1.1.202"
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},
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"devDependencies": {
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"@
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"
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"
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"
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"@platforma-sdk/
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"
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"src/index.ts"
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],
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"splitting": false,
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"treeshake": true,
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"clean": true,
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"format": [
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"cjs",
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"esm"
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],
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"dts": true,
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"minify": false,
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"sourcemap": true
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"@milaboratories/ts-builder": "1.2.1",
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"@milaboratories/ts-configs": "1.2.0",
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"@platforma-sdk/block-tools": "2.6.29",
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"@platforma-sdk/eslint-config": "1.2.0",
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"@platforma-sdk/test": "1.51.3",
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"typescript": "~5.6.3",
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"vitest": "^4.0.7",
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"eslint": "^9.25.1"
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},
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"scripts": {
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"build": "
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"
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"build": "ts-builder build --target block-model && block-tools build-model",
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"watch": "ts-builder build --target block-model --watch",
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"type-check": "ts-builder types --target block-model",
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"lint": "eslint .",
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"test": "vitest"
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}
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}
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package/src/index.ts
CHANGED
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@@ -1,5 +1,5 @@
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import type { GraphMakerState } from '@milaboratories/graph-maker';
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import type {
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import type { PColumnIdAndSpec, PlDataTableStateV2, PlRef } from '@platforma-sdk/model';
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import { BlockModel, createPFrameForGraphs, createPlDataTableStateV2, createPlDataTableV2 } from '@platforma-sdk/model';
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export * from './converters';
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@@ -23,13 +23,14 @@ export type MetricUI = Metric & {
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};
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export type BlockArgs = {
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defaultBlockLabel: string;
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customBlockLabel: string;
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abundanceRef?: PlRef;
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metrics: Metric[];
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};
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export type UiState = {
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metrics: MetricUI[];
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blockTitle: string;
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tableState: PlDataTableStateV2;
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graphState: GraphMakerState;
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};
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export const model = BlockModel.create()
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.withArgs<BlockArgs>({
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metrics: [],
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defaultBlockLabel: '',
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customBlockLabel: '',
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})
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.withUiState<UiState>({
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blockTitle: 'Repertoire Diversity',
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graphState: {
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title: 'Repertoire Diversity',
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template: 'bar',
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@@ -113,10 +115,10 @@ export const model = BlockModel.create()
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'pl7.app/abundance/isPrimary': 'true',
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},
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},
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]),
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], { includeNativeLabel: true }),
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)
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.
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.outputWithStatus('pt', (ctx) => {
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const pCols = ctx.outputs?.resolve('pf')?.getPColumns();
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if (pCols === undefined) {
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return undefined;
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return createPlDataTableV2(ctx, pCols, ctx.uiState.tableState);
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})
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.outputWithStatus('pf', (ctx) => {
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const pCols = ctx.outputs?.resolve('pf')?.getPColumns();
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if (pCols === undefined) {
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return undefined;
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@@ -153,7 +155,9 @@ export const model = BlockModel.create()
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.output('isRunning', (ctx) => ctx.outputs?.getIsReadyOrError() === false)
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.title((
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.title(() => 'Repertoire Diversity')
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.subtitle((ctx) => ctx.args.customBlockLabel || ctx.args.defaultBlockLabel)
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.sections((_) => [
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{ type: 'link', href: '/', label: 'Main' },
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])
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.done(2);
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export type BlockOutputs = InferOutputsType<typeof model>;
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package/tsconfig.json
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{
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"
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"target": "es2022",
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"module": "commonjs",
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"moduleResolution": "node",
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"esModuleInterop": true,
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"strict": true,
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"outDir": "./dist",
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"rootDir": "./src",
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"sourceMap": true,
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"declaration": true
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},
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"types": [],
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"extends": "@milaboratories/ts-configs/block/model",
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"include": ["src/**/*"],
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"exclude": ["node_modules", "dist"]
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}
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package/dist/index.d.cts
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import * as _platforma_sdk_model from '@platforma-sdk/model';
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import { PlRef, PlDataTableStateV2, InferOutputsType } from '@platforma-sdk/model';
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import { GraphMakerState } from '@milaboratories/graph-maker';
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declare const convertMetricsUiToArgs: (metrics: MetricUI[]) => Metric[];
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type DiversityType = 'chao1' | 'd50' | 'efronThisted' | 'observed' | 'shannonWienerIndex' | 'shannonWiener' | 'normalizedShannonWiener' | 'inverseSimpson' | 'gini';
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type Metric = {
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type: DiversityType | undefined;
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downsampling: {
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type?: 'none' | 'top' | 'cumtop' | 'hypergeometric';
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valueChooser?: 'min' | 'fixed' | 'max' | 'auto';
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n?: number;
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};
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};
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type MetricUI = Metric & {
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id: string;
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isExpanded?: boolean;
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};
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type BlockArgs = {
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abundanceRef?: PlRef;
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metrics: Metric[];
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};
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type UiState = {
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metrics: MetricUI[];
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blockTitle: string;
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tableState: PlDataTableStateV2;
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graphState: GraphMakerState;
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};
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declare const model: _platforma_sdk_model.PlatformaV2<BlockArgs, {
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abundanceOptions: _platforma_sdk_model.ValueOrErrors<{
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readonly ref: {
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readonly __isRef: true;
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readonly blockId: string;
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readonly name: string;
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readonly requireEnrichments?: true | undefined;
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};
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readonly label: string;
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}[]>;
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pt: _platforma_sdk_model.ValueOrErrors<{
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sourceId: string | null;
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fullTableHandle: _platforma_sdk_model.PTableHandle;
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visibleTableHandle: _platforma_sdk_model.PTableHandle;
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} | undefined>;
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pf: _platforma_sdk_model.ValueOrErrors<_platforma_sdk_model.PFrameHandle | undefined>;
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pcols: _platforma_sdk_model.ValueOrErrors<{
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columnId: _platforma_sdk_model.PObjectId;
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spec: {
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readonly valueType: _platforma_sdk_model.ValueType;
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readonly kind: "PColumn";
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readonly name: string;
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readonly domain?: {
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[x: string]: string;
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} | undefined;
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readonly annotations?: {
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[x: string]: string;
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} | undefined;
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readonly parentAxes?: number[] | undefined;
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readonly axesSpec: {
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readonly type: _platforma_sdk_model.ValueType;
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readonly name: string;
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readonly domain?: {
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[x: string]: string;
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} | undefined;
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readonly annotations?: {
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[x: string]: string;
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} | undefined;
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readonly parentAxes?: number[] | undefined;
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}[];
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};
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}[] | undefined>;
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isRunning: _platforma_sdk_model.ValueOrErrors<boolean>;
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}, UiState, "/" | "/diversityGraph">;
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type BlockOutputs = InferOutputsType<typeof model>;
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export { type BlockArgs, type BlockOutputs, type DiversityType, type Metric, type MetricUI, type UiState, convertMetricsUiToArgs, model };
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package/vite.config.mts
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import { defineConfig } from 'vite';
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export default defineConfig({
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build: {
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emptyOutDir: false,
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lib: {
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entry: 'src/index.ts',
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name: 'model',
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fileName: (format) => `my-lib.${format}.js`
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},
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minify: false,
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sourcemap: true,
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rollupOptions: {
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output: {
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format: 'iife',
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entryFileNames: 'bundle.js'
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}
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}
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}
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});
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