@platforma-open/milaboratories.repertoire-diversity-2.model 1.5.3 → 1.5.5

package/dist/converters.cjs

@@ -0,0 +1,13 @@
+'use strict';
+
+const convertMetricsUiToArgs = (metrics) => {
+    return metrics.map((metric) => {
+        return {
+            type: metric.type,
+            downsampling: metric.downsampling,
+        };
+    });
+};
+
+exports.convertMetricsUiToArgs = convertMetricsUiToArgs;
+//# sourceMappingURL=converters.cjs.map

package/dist/converters.cjs.map

@@ -0,0 +1 @@
+{"version":3,"file":"converters.cjs","sources":["../src/converters.ts"],"sourcesContent":["import type { Metric, MetricUI } from './index';\n\nexport const convertMetricsUiToArgs = (metrics: MetricUI[]): Metric[] => {\n  return metrics.map((metric): Metric => {\n    return {\n      type: metric.type,\n      downsampling: metric.downsampling,\n    };\n  });\n};\n"],"names":[],"mappings":";;AAEO,MAAM,sBAAsB,GAAG,CAAC,OAAmB,KAAc;AACtE,IAAA,OAAO,OAAO,CAAC,GAAG,CAAC,CAAC,MAAM,KAAY;QACpC,OAAO;YACL,IAAI,EAAE,MAAM,CAAC,IAAI;YACjB,YAAY,EAAE,MAAM,CAAC,YAAY;SAClC;AACH,IAAA,CAAC,CAAC;AACJ;;;;"}

package/dist/converters.d.ts

@@ -0,0 +1,3 @@
+import type { Metric, MetricUI } from './index';
+export declare const convertMetricsUiToArgs: (metrics: MetricUI[]) => Metric[];
+//# sourceMappingURL=converters.d.ts.map

package/dist/converters.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"converters.d.ts","sourceRoot":"","sources":["../src/converters.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,SAAS,CAAC;AAEhD,eAAO,MAAM,sBAAsB,YAAa,QAAQ,EAAE,KAAG,MAAM,EAOlE,CAAC"}

package/dist/converters.js

@@ -0,0 +1,11 @@
+const convertMetricsUiToArgs = (metrics) => {
+    return metrics.map((metric) => {
+        return {
+            type: metric.type,
+            downsampling: metric.downsampling,
+        };
+    });
+};
+
+export { convertMetricsUiToArgs };
+//# sourceMappingURL=converters.js.map

package/dist/converters.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"converters.js","sources":["../src/converters.ts"],"sourcesContent":["import type { Metric, MetricUI } from './index';\n\nexport const convertMetricsUiToArgs = (metrics: MetricUI[]): Metric[] => {\n  return metrics.map((metric): Metric => {\n    return {\n      type: metric.type,\n      downsampling: metric.downsampling,\n    };\n  });\n};\n"],"names":[],"mappings":"AAEO,MAAM,sBAAsB,GAAG,CAAC,OAAmB,KAAc;AACtE,IAAA,OAAO,OAAO,CAAC,GAAG,CAAC,CAAC,MAAM,KAAY;QACpC,OAAO;YACL,IAAI,EAAE,MAAM,CAAC,IAAI;YACjB,YAAY,EAAE,MAAM,CAAC,YAAY;SAClC;AACH,IAAA,CAAC,CAAC;AACJ;;;;"}

package/dist/index.cjs

@@ -1,121 +1,115 @@
 'use strict';
 
 var model$1 = require('@platforma-sdk/model');
+var converters = require('./converters.cjs');
 
-// src/index.ts
-
-// src/converters.ts
-var convertMetricsUiToArgs = (metrics) => {
-  return metrics.map((metric) => {
-    return {
-      type: metric.type,
-      downsampling: metric.downsampling
-    };
-  });
-};
-
-// src/index.ts
-var model = model$1.BlockModel.create().withArgs({
-  metrics: []
-}).withUiState({
-  blockTitle: "Repertoire Diversity",
-  graphState: {
-    title: "Repertoire Diversity",
-    template: "bar",
-    currentTab: null
-  },
-  tableState: model$1.createPlDataTableStateV2(),
-  metrics: [
-    {
-      id: "observed",
-      type: "observed",
-      downsampling: {
-        type: "hypergeometric",
-        valueChooser: "auto"
-      },
-      isExpanded: false
-    },
-    {
-      id: "shannonWiener",
-      type: "shannonWiener",
-      downsampling: {
-        type: "hypergeometric",
-        valueChooser: "auto"
-      },
-      isExpanded: false
+const model = model$1.BlockModel.create()
+    .withArgs({
+    metrics: [],
+})
+    .withUiState({
+    blockTitle: 'Repertoire Diversity',
+    graphState: {
+        title: 'Repertoire Diversity',
+        template: 'bar',
+        currentTab: null,
     },
-    {
-      id: "chao1",
-      type: "chao1",
-      downsampling: {
-        type: "hypergeometric",
-        valueChooser: "auto"
-      },
-      isExpanded: false
+    tableState: model$1.createPlDataTableStateV2(),
+    metrics: [
+        {
+            id: 'observed',
+            type: 'observed',
+            downsampling: {
+                type: 'hypergeometric',
+                valueChooser: 'auto',
+            },
+            isExpanded: false,
+        },
+        {
+            id: 'shannonWiener',
+            type: 'shannonWiener',
+            downsampling: {
+                type: 'hypergeometric',
+                valueChooser: 'auto',
+            },
+            isExpanded: false,
+        },
+        {
+            id: 'chao1',
+            type: 'chao1',
+            downsampling: {
+                type: 'hypergeometric',
+                valueChooser: 'auto',
+            },
+            isExpanded: false,
+        },
+        {
+            id: 'gini',
+            type: 'gini',
+            downsampling: {
+                type: 'hypergeometric',
+                valueChooser: 'auto',
+            },
+            isExpanded: false,
+        },
+        {
+            id: 'd50',
+            type: 'd50',
+            downsampling: {
+                type: 'hypergeometric',
+                valueChooser: 'auto',
+            },
+            isExpanded: false,
+        },
+    ],
+})
+    .argsValid((ctx) => ctx.args.abundanceRef !== undefined
+    && ctx.args.metrics.every((metric) => metric.type !== undefined))
+    .output('abundanceOptions', (ctx) => ctx.resultPool.getOptions([{
+        axes: [
+            { name: 'pl7.app/sampleId' },
+            {},
+        ],
+        annotations: {
+            'pl7.app/isAbundance': 'true',
+            'pl7.app/abundance/normalized': 'false',
+            'pl7.app/abundance/isPrimary': 'true',
+        },
     },
-    {
-      id: "gini",
-      type: "gini",
-      downsampling: {
-        type: "hypergeometric",
-        valueChooser: "auto"
-      },
-      isExpanded: false
-    },
-    {
-      id: "d50",
-      type: "d50",
-      downsampling: {
-        type: "hypergeometric",
-        valueChooser: "auto"
-      },
-      isExpanded: false
+]))
+    .outputWithStatus('pt', (ctx) => {
+    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();
+    if (pCols === undefined) {
+        return undefined;
+    }
+    return model$1.createPlDataTableV2(ctx, pCols, ctx.uiState.tableState);
+})
+    .outputWithStatus('pf', (ctx) => {
+    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();
+    if (pCols === undefined) {
+        return undefined;
     }
-  ]
-}).argsValid((ctx) => ctx.args.abundanceRef !== void 0 && ctx.args.metrics.every((metric) => metric.type !== void 0)).output(
-  "abundanceOptions",
-  (ctx) => ctx.resultPool.getOptions([
-    {
-      axes: [
-        { name: "pl7.app/sampleId" },
-        {}
-      ],
-      annotations: {
-        "pl7.app/isAbundance": "true",
-        "pl7.app/abundance/normalized": "false",
-        "pl7.app/abundance/isPrimary": "true"
-      }
+    return model$1.createPFrameForGraphs(ctx, pCols);
+})
+    // Return a list of Pcols for plot defaults
+    .output('pcols', (ctx) => {
+    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();
+    if (pCols === undefined || pCols.length === 0) {
+        return undefined;
     }
-  ])
-).output("pt", (ctx) => {
-  const pCols = ctx.outputs?.resolve("pf")?.getPColumns();
-  if (pCols === void 0) {
-    return void 0;
-  }
-  return model$1.createPlDataTableV2(ctx, pCols, ctx.uiState.tableState);
-}).output("pf", (ctx) => {
-  const pCols = ctx.outputs?.resolve("pf")?.getPColumns();
-  if (pCols === void 0) {
-    return void 0;
-  }
-  return model$1.createPFrameForGraphs(ctx, pCols);
-}).output("pcols", (ctx) => {
-  const pCols = ctx.outputs?.resolve("pf")?.getPColumns();
-  if (pCols === void 0 || pCols.length === 0) {
-    return void 0;
-  }
-  return pCols.map(
-    (c) => ({
-      columnId: c.id,
-      spec: c.spec
-    })
-  );
-}).output("isRunning", (ctx) => ctx.outputs?.getIsReadyOrError() === false).title((ctx) => ctx.uiState?.blockTitle ?? "Repertoire Diversity").sections((_) => [
-  { type: "link", href: "/", label: "Main" },
-  { type: "link", href: "/diversityGraph", label: "Diversity Graph" }
-]).done(2);
+    return pCols.map((c) => ({
+        columnId: c.id,
+        spec: c.spec,
+    }));
+})
+    .output('isRunning', (ctx) => ctx.outputs?.getIsReadyOrError() === false)
+    .title((ctx) => ctx.uiState?.blockTitle ?? 'Repertoire Diversity')
+    .sections((_) => [
+    { type: 'link', href: '/', label: 'Main' },
+    { type: 'link', href: '/diversityGraph', label: 'Diversity Graph' },
+])
+    .done(2);
 
-exports.convertMetricsUiToArgs = convertMetricsUiToArgs;
+exports.convertMetricsUiToArgs = converters.convertMetricsUiToArgs;
 exports.model = model;
 //# sourceMappingURL=index.cjs.map
-//# sourceMappingURL=index.cjs.map

package/dist/index.cjs.map

@@ -1 +1 @@
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type { Metric, MetricUI } from './index';\n\nexport const convertMetricsUiToArgs = (metrics: MetricUI[]): Metric[] => {\n  return metrics.map((metric): Metric => {\n    return {\n      type: metric.type,\n      downsampling: metric.downsampling,\n    };\n  });\n};\n","import type { GraphMakerState } from '@milaboratories/graph-maker';\nimport type { InferOutputsType, PColumnIdAndSpec, PlDataTableStateV2, PlRef } from '@platforma-sdk/model';\nimport { BlockModel, createPFrameForGraphs, createPlDataTableStateV2, createPlDataTableV2 } from '@platforma-sdk/model';\n\nexport * from './converters';\n\nexport type DiversityType = 'chao1' | 'd50' | 'efronThisted' |\n  'observed' | 'shannonWienerIndex' | 'shannonWiener' |\n  'normalizedShannonWiener' | 'inverseSimpson' | 'gini';\n\nexport type Metric = {\n  type: DiversityType | undefined;\n  downsampling: {\n    type?: 'none' | 'top' | 'cumtop' | 'hypergeometric' ;\n    valueChooser?: 'min' | 'fixed' | 'max' | 'auto';\n    n?: number;\n  };\n};\n\nexport type MetricUI = Metric & {\n  id: string;\n  isExpanded?: boolean;\n};\n\nexport type BlockArgs = {\n  abundanceRef?: PlRef;\n  metrics: Metric[];\n};\n\nexport type UiState = {\n  metrics: MetricUI[];\n  blockTitle: string;\n  tableState: PlDataTableStateV2;\n  graphState: GraphMakerState;\n};\n\nexport const model = BlockModel.create()\n  .withArgs<BlockArgs>({\n    metrics: [],\n  })\n\n  .withUiState<UiState>({\n    blockTitle: 'Repertoire Diversity',\n    graphState: {\n      title: 'Repertoire Diversity',\n      template: 'bar',\n      currentTab: null,\n    },\n\n    tableState: createPlDataTableStateV2(),\n\n    metrics: [\n      {\n        id: 'observed',\n        type: 'observed',\n        downsampling: {\n          type: 'hypergeometric',\n          valueChooser: 'auto',\n        },\n        isExpanded: false,\n      },\n      {\n        id: 'shannonWiener',\n        type: 'shannonWiener',\n        downsampling: {\n          type: 'hypergeometric',\n          valueChooser: 'auto',\n        },\n        isExpanded: false,\n      },\n      {\n        id: 'chao1',\n        type: 'chao1',\n        downsampling: {\n          type: 'hypergeometric',\n          valueChooser: 'auto',\n        },\n        isExpanded: false,\n      },\n      {\n        id: 'gini',\n        type: 'gini',\n        downsampling: {\n          type: 'hypergeometric',\n          valueChooser: 'auto',\n        },\n        isExpanded: false,\n      },\n      {\n        id: 'd50',\n        type: 'd50',\n        downsampling: {\n          type: 'hypergeometric',\n          valueChooser: 'auto',\n        },\n        isExpanded: false,\n      },\n    ],\n  })\n\n  .argsValid((ctx) => ctx.args.abundanceRef !== undefined\n    && ctx.args.metrics.every((metric) => metric.type !== undefined))\n\n  .output('abundanceOptions', (ctx) =>\n    ctx.resultPool.getOptions([{\n      axes: [\n        { name: 'pl7.app/sampleId' },\n        { },\n      ],\n      annotations: {\n        'pl7.app/isAbundance': 'true',\n        'pl7.app/abundance/normalized': 'false',\n        'pl7.app/abundance/isPrimary': 'true',\n      },\n    },\n    ]),\n  )\n\n  .output('pt', (ctx) => {\n    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();\n    if (pCols === undefined) {\n      return undefined;\n    }\n\n    return createPlDataTableV2(ctx, pCols, ctx.uiState.tableState);\n  })\n\n  .output('pf', (ctx) => {\n    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();\n    if (pCols === undefined) {\n      return undefined;\n    }\n\n    return createPFrameForGraphs(ctx, pCols);\n  })\n\n  // Return a list of Pcols for plot defaults\n  .output('pcols', (ctx) => {\n    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();\n\n    if (pCols === undefined || pCols.length === 0) {\n      return undefined;\n    }\n\n    return pCols.map(\n      (c) =>\n        ({\n          columnId: c.id,\n          spec: c.spec,\n        } satisfies PColumnIdAndSpec),\n    );\n  })\n\n  .output('isRunning', (ctx) => ctx.outputs?.getIsReadyOrError() === false)\n\n  .title((ctx) => ctx.uiState?.blockTitle ?? 'Repertoire Diversity')\n\n  .sections((_) => [\n    { type: 'link', href: '/', label: 'Main' },\n    { type: 'link', href: '/diversityGraph', label: 'Diversity Graph' },\n  ])\n\n  .done(2);\n\nexport type BlockOutputs = InferOutputsType<typeof model>;\n"]}
+{"version":3,"file":"index.cjs","sources":["../src/index.ts"],"sourcesContent":["import type { GraphMakerState } from '@milaboratories/graph-maker';\nimport type { InferOutputsType, PColumnIdAndSpec, PlDataTableStateV2, PlRef } from '@platforma-sdk/model';\nimport { BlockModel, createPFrameForGraphs, createPlDataTableStateV2, createPlDataTableV2 } from '@platforma-sdk/model';\n\nexport * from './converters';\n\nexport type DiversityType = 'chao1' | 'd50' | 'efronThisted' |\n  'observed' | 'shannonWienerIndex' | 'shannonWiener' |\n  'normalizedShannonWiener' | 'inverseSimpson' | 'gini';\n\nexport type Metric = {\n  type: DiversityType | undefined;\n  downsampling: {\n    type?: 'none' | 'top' | 'cumtop' | 'hypergeometric' ;\n    valueChooser?: 'min' | 'fixed' | 'max' | 'auto';\n    n?: number;\n  };\n};\n\nexport type MetricUI = Metric & {\n  id: string;\n  isExpanded?: boolean;\n};\n\nexport type BlockArgs = {\n  abundanceRef?: PlRef;\n  metrics: Metric[];\n};\n\nexport type UiState = {\n  metrics: MetricUI[];\n  blockTitle: string;\n  tableState: PlDataTableStateV2;\n  graphState: GraphMakerState;\n};\n\nexport const model = BlockModel.create()\n  .withArgs<BlockArgs>({\n    metrics: [],\n  })\n\n  .withUiState<UiState>({\n    blockTitle: 'Repertoire Diversity',\n    graphState: {\n      title: 'Repertoire Diversity',\n      template: 'bar',\n      currentTab: null,\n    },\n\n    tableState: createPlDataTableStateV2(),\n\n    metrics: [\n      {\n        id: 'observed',\n        type: 'observed',\n        downsampling: {\n          type: 'hypergeometric',\n          valueChooser: 'auto',\n        },\n        isExpanded: false,\n      },\n      {\n        id: 'shannonWiener',\n        type: 'shannonWiener',\n        downsampling: {\n          type: 'hypergeometric',\n          valueChooser: 'auto',\n        },\n        isExpanded: false,\n      },\n      {\n        id: 'chao1',\n        type: 'chao1',\n        downsampling: {\n          type: 'hypergeometric',\n          valueChooser: 'auto',\n        },\n        isExpanded: false,\n      },\n      {\n        id: 'gini',\n        type: 'gini',\n        downsampling: {\n          type: 'hypergeometric',\n          valueChooser: 'auto',\n        },\n        isExpanded: false,\n      },\n      {\n        id: 'd50',\n        type: 'd50',\n        downsampling: {\n          type: 'hypergeometric',\n          valueChooser: 'auto',\n        },\n        isExpanded: false,\n      },\n    ],\n  })\n\n  .argsValid((ctx) => ctx.args.abundanceRef !== undefined\n    && ctx.args.metrics.every((metric) => metric.type !== undefined))\n\n  .output('abundanceOptions', (ctx) =>\n    ctx.resultPool.getOptions([{\n      axes: [\n        { name: 'pl7.app/sampleId' },\n        { },\n      ],\n      annotations: {\n        'pl7.app/isAbundance': 'true',\n        'pl7.app/abundance/normalized': 'false',\n        'pl7.app/abundance/isPrimary': 'true',\n      },\n    },\n    ]),\n  )\n\n  .outputWithStatus('pt', (ctx) => {\n    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();\n    if (pCols === undefined) {\n      return undefined;\n    }\n\n    return createPlDataTableV2(ctx, pCols, ctx.uiState.tableState);\n  })\n\n  .outputWithStatus('pf', (ctx) => {\n    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();\n    if (pCols === undefined) {\n      return undefined;\n    }\n\n    return createPFrameForGraphs(ctx, pCols);\n  })\n\n  // Return a list of Pcols for plot defaults\n  .output('pcols', (ctx) => {\n    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();\n\n    if (pCols === undefined || pCols.length === 0) {\n      return undefined;\n    }\n\n    return pCols.map(\n      (c) =>\n        ({\n          columnId: c.id,\n          spec: c.spec,\n        } satisfies PColumnIdAndSpec),\n    );\n  })\n\n  .output('isRunning', (ctx) => ctx.outputs?.getIsReadyOrError() === false)\n\n  .title((ctx) => ctx.uiState?.blockTitle ?? 'Repertoire Diversity')\n\n  .sections((_) => [\n    { type: 'link', href: '/', label: 'Main' },\n    { type: 'link', href: '/diversityGraph', label: 'Diversity Graph' },\n  ])\n\n  .done(2);\n\nexport type BlockOutputs = InferOutputsType<typeof model>;\n"],"names":["BlockModel","createPlDataTableStateV2","createPlDataTableV2","createPFrameForGraphs"],"mappings":";;;;;AAoCO,MAAM,KAAK,GAAGA,kBAAU,CAAC,MAAM;AACnC,KAAA,QAAQ,CAAY;AACnB,IAAA,OAAO,EAAE,EAAE;CACZ;AAEA,KAAA,WAAW,CAAU;AACpB,IAAA,UAAU,EAAE,sBAAsB;AAClC,IAAA,UAAU,EAAE;AACV,QAAA,KAAK,EAAE,sBAAsB;AAC7B,QAAA,QAAQ,EAAE,KAAK;AACf,QAAA,UAAU,EAAE,IAAI;AACjB,KAAA;IAED,UAAU,EAAEC,gCAAwB,EAAE;AAEtC,IAAA,OAAO,EAAE;AACP,QAAA;AACE,YAAA,EAAE,EAAE,UAAU;AACd,YAAA,IAAI,EAAE,UAAU;AAChB,YAAA,YAAY,EAAE;AACZ,gBAAA,IAAI,EAAE,gBAAgB;AACtB,gBAAA,YAAY,EAAE,MAAM;AACrB,aAAA;AACD,YAAA,UAAU,EAAE,KAAK;AAClB,SAAA;AACD,QAAA;AACE,YAAA,EAAE,EAAE,eAAe;AACnB,YAAA,IAAI,EAAE,eAAe;AACrB,YAAA,YAAY,EAAE;AACZ,gBAAA,IAAI,EAAE,gBAAgB;AACtB,gBAAA,YAAY,EAAE,MAAM;AACrB,aAAA;AACD,YAAA,UAAU,EAAE,KAAK;AAClB,SAAA;AACD,QAAA;AACE,YAAA,EAAE,EAAE,OAAO;AACX,YAAA,IAAI,EAAE,OAAO;AACb,YAAA,YAAY,EAAE;AACZ,gBAAA,IAAI,EAAE,gBAAgB;AACtB,gBAAA,YAAY,EAAE,MAAM;AACrB,aAAA;AACD,YAAA,UAAU,EAAE,KAAK;AAClB,SAAA;AACD,QAAA;AACE,YAAA,EAAE,EAAE,MAAM;AACV,YAAA,IAAI,EAAE,MAAM;AACZ,YAAA,YAAY,EAAE;AACZ,gBAAA,IAAI,EAAE,gBAAgB;AACtB,gBAAA,YAAY,EAAE,MAAM;AACrB,aAAA;AACD,YAAA,UAAU,EAAE,KAAK;AAClB,SAAA;AACD,QAAA;AACE,YAAA,EAAE,EAAE,KAAK;AACT,YAAA,IAAI,EAAE,KAAK;AACX,YAAA,YAAY,EAAE;AACZ,gBAAA,IAAI,EAAE,gBAAgB;AACtB,gBAAA,YAAY,EAAE,MAAM;AACrB,aAAA;AACD,YAAA,UAAU,EAAE,KAAK;AAClB,SAAA;AACF,KAAA;CACF;AAEA,KAAA,SAAS,CAAC,CAAC,GAAG,KAAK,GAAG,CAAC,IAAI,CAAC,YAAY,KAAK;AACzC,OAAA,GAAG,CAAC,IAAI,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,MAAM,KAAK,MAAM,CAAC,IAAI,KAAK,SAAS,CAAC;AAEjE,KAAA,MAAM,CAAC,kBAAkB,EAAE,CAAC,GAAG,KAC9B,GAAG,CAAC,UAAU,CAAC,UAAU,CAAC,CAAC;AACzB,QAAA,IAAI,EAAE;YACJ,EAAE,IAAI,EAAE,kBAAkB,EAAE;YAC5B,EAAG;AACJ,SAAA;AACD,QAAA,WAAW,EAAE;AACX,YAAA,qBAAqB,EAAE,MAAM;AAC7B,YAAA,8BAA8B,EAAE,OAAO;AACvC,YAAA,6BAA6B,EAAE,MAAM;AACtC,SAAA;AACF,KAAA;AACA,CAAA,CAAC;AAGH,KAAA,gBAAgB,CAAC,IAAI,EAAE,CAAC,GAAG,KAAI;AAC9B,IAAA,MAAM,KAAK,GAAG,GAAG,CAAC,OAAO,EAAE,OAAO,CAAC,IAAI,CAAC,EAAE,WAAW,EAAE;AACvD,IAAA,IAAI,KAAK,KAAK,SAAS,EAAE;AACvB,QAAA,OAAO,SAAS;IAClB;AAEA,IAAA,OAAOC,2BAAmB,CAAC,GAAG,EAAE,KAAK,EAAE,GAAG,CAAC,OAAO,CAAC,UAAU,CAAC;AAChE,CAAC;AAEA,KAAA,gBAAgB,CAAC,IAAI,EAAE,CAAC,GAAG,KAAI;AAC9B,IAAA,MAAM,KAAK,GAAG,GAAG,CAAC,OAAO,EAAE,OAAO,CAAC,IAAI,CAAC,EAAE,WAAW,EAAE;AACvD,IAAA,IAAI,KAAK,KAAK,SAAS,EAAE;AACvB,QAAA,OAAO,SAAS;IAClB;AAEA,IAAA,OAAOC,6BAAqB,CAAC,GAAG,EAAE,KAAK,CAAC;AAC1C,CAAC;;AAGA,KAAA,MAAM,CAAC,OAAO,EAAE,CAAC,GAAG,KAAI;AACvB,IAAA,MAAM,KAAK,GAAG,GAAG,CAAC,OAAO,EAAE,OAAO,CAAC,IAAI,CAAC,EAAE,WAAW,EAAE;IAEvD,IAAI,KAAK,KAAK,SAAS,IAAI,KAAK,CAAC,MAAM,KAAK,CAAC,EAAE;AAC7C,QAAA,OAAO,SAAS;IAClB;IAEA,OAAO,KAAK,CAAC,GAAG,CACd,CAAC,CAAC,MACC;QACC,QAAQ,EAAE,CAAC,CAAC,EAAE;QACd,IAAI,EAAE,CAAC,CAAC,IAAI;AACe,KAAA,CAAA,CAChC;AACH,CAAC;AAEA,KAAA,MAAM,CAAC,WAAW,EAAE,CAAC,GAAG,KAAK,GAAG,CAAC,OAAO,EAAE,iBAAiB,EAAE,KAAK,KAAK;AAEvE,KAAA,KAAK,CAAC,CAAC,GAAG,KAAK,GAAG,CAAC,OAAO,EAAE,UAAU,IAAI,sBAAsB;AAEhE,KAAA,QAAQ,CAAC,CAAC,CAAC,KAAK;IACf,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,GAAG,EAAE,KAAK,EAAE,MAAM,EAAE;IAC1C,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,iBAAiB,EAAE,KAAK,EAAE,iBAAiB,EAAE;CACpE;KAEA,IAAI,CAAC,CAAC;;;;;"}

package/dist/index.d.ts

@@ -1,11 +1,8 @@
-import * as _platforma_sdk_model from '@platforma-sdk/model';
-import { PlRef, PlDataTableStateV2, InferOutputsType } from '@platforma-sdk/model';
-import { GraphMakerState } from '@milaboratories/graph-maker';
-
-declare const convertMetricsUiToArgs: (metrics: MetricUI[]) => Metric[];
-
-type DiversityType = 'chao1' | 'd50' | 'efronThisted' | 'observed' | 'shannonWienerIndex' | 'shannonWiener' | 'normalizedShannonWiener' | 'inverseSimpson' | 'gini';
-type Metric = {
+import type { GraphMakerState } from '@milaboratories/graph-maker';
+import type { InferOutputsType, PlDataTableStateV2, PlRef } from '@platforma-sdk/model';
+export * from './converters';
+export type DiversityType = 'chao1' | 'd50' | 'efronThisted' | 'observed' | 'shannonWienerIndex' | 'shannonWiener' | 'normalizedShannonWiener' | 'inverseSimpson' | 'gini';
+export type Metric = {
     type: DiversityType | undefined;
     downsampling: {
         type?: 'none' | 'top' | 'cumtop' | 'hypergeometric';
@@ -13,22 +10,22 @@ type Metric = {
         n?: number;
     };
 };
-type MetricUI = Metric & {
+export type MetricUI = Metric & {
     id: string;
     isExpanded?: boolean;
 };
-type BlockArgs = {
+export type BlockArgs = {
     abundanceRef?: PlRef;
     metrics: Metric[];
 };
-type UiState = {
+export type UiState = {
     metrics: MetricUI[];
     blockTitle: string;
     tableState: PlDataTableStateV2;
     graphState: GraphMakerState;
 };
-declare const model: _platforma_sdk_model.PlatformaV2<BlockArgs, {
-    abundanceOptions: _platforma_sdk_model.ValueOrErrors<{
+export declare const model: import("@platforma-sdk/model").PlatformaExtended<import("@platforma-sdk/model").PlatformaV2<BlockArgs, {
+    abundanceOptions: import("@platforma-sdk/model").OutputWithStatus<{
         readonly ref: {
             readonly __isRef: true;
             readonly blockId: string;
@@ -36,17 +33,22 @@ declare const model: _platforma_sdk_model.PlatformaV2<BlockArgs, {
             readonly requireEnrichments?: true | undefined;
         };
         readonly label: string;
-    }[]>;
-    pt: _platforma_sdk_model.ValueOrErrors<{
+    }[]> & {
+        __unwrap: true;
+    };
+    pt: import("@platforma-sdk/model").OutputWithStatus<{
         sourceId: string | null;
-        fullTableHandle: _platforma_sdk_model.PTableHandle;
-        visibleTableHandle: _platforma_sdk_model.PTableHandle;
-    } | undefined>;
-    pf: _platforma_sdk_model.ValueOrErrors<_platforma_sdk_model.PFrameHandle | undefined>;
-    pcols: _platforma_sdk_model.ValueOrErrors<{
-        columnId: _platforma_sdk_model.PObjectId;
+        fullTableHandle: import("@platforma-sdk/model").PTableHandle;
+        visibleTableHandle: import("@platforma-sdk/model").PTableHandle;
+    }> & {
+        __unwrap: false;
+    };
+    pf: import("@platforma-sdk/model").OutputWithStatus<import("@platforma-sdk/model").PFrameHandle> & {
+        __unwrap: false;
+    };
+    pcols: import("@platforma-sdk/model").OutputWithStatus<{
+        columnId: import("@platforma-sdk/model").PObjectId;
         spec: {
-            readonly valueType: _platforma_sdk_model.ValueType;
             readonly kind: "PColumn";
             readonly name: string;
             readonly domain?: {
@@ -55,9 +57,10 @@ declare const model: _platforma_sdk_model.PlatformaV2<BlockArgs, {
             readonly annotations?: {
                 [x: string]: string;
             } | undefined;
+            readonly valueType: "Int" | "Long" | "Float" | "Double" | "String" | "Bytes";
             readonly parentAxes?: number[] | undefined;
             readonly axesSpec: {
-                readonly type: _platforma_sdk_model.ValueType;
+                readonly type: import("@platforma-sdk/model").ValueType;
                 readonly name: string;
                 readonly domain?: {
                     [x: string]: string;
@@ -68,9 +71,12 @@ declare const model: _platforma_sdk_model.PlatformaV2<BlockArgs, {
                 readonly parentAxes?: number[] | undefined;
             }[];
         };
-    }[] | undefined>;
-    isRunning: _platforma_sdk_model.ValueOrErrors<boolean>;
-}, UiState, "/" | "/diversityGraph">;
-type BlockOutputs = InferOutputsType<typeof model>;
-
-export { type BlockArgs, type BlockOutputs, type DiversityType, type Metric, type MetricUI, type UiState, convertMetricsUiToArgs, model };
+    }[] | undefined> & {
+        __unwrap: true;
+    };
+    isRunning: import("@platforma-sdk/model").OutputWithStatus<boolean> & {
+        __unwrap: true;
+    };
+}, UiState, "/" | "/diversityGraph">>;
+export type BlockOutputs = InferOutputsType<typeof model>;
+//# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

@@ -0,0 +1 @@
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package/dist/index.js

@@ -1,118 +1,112 @@
 import { BlockModel, createPlDataTableStateV2, createPlDataTableV2, createPFrameForGraphs } from '@platforma-sdk/model';
+export { convertMetricsUiToArgs } from './converters.js';
 
-// src/index.ts
-
-// src/converters.ts
-var convertMetricsUiToArgs = (metrics) => {
-  return metrics.map((metric) => {
-    return {
-      type: metric.type,
-      downsampling: metric.downsampling
-    };
-  });
-};
-
-// src/index.ts
-var model = BlockModel.create().withArgs({
-  metrics: []
-}).withUiState({
-  blockTitle: "Repertoire Diversity",
-  graphState: {
-    title: "Repertoire Diversity",
-    template: "bar",
-    currentTab: null
-  },
-  tableState: createPlDataTableStateV2(),
-  metrics: [
-    {
-      id: "observed",
-      type: "observed",
-      downsampling: {
-        type: "hypergeometric",
-        valueChooser: "auto"
-      },
-      isExpanded: false
-    },
-    {
-      id: "shannonWiener",
-      type: "shannonWiener",
-      downsampling: {
-        type: "hypergeometric",
-        valueChooser: "auto"
-      },
-      isExpanded: false
+const model = BlockModel.create()
+    .withArgs({
+    metrics: [],
+})
+    .withUiState({
+    blockTitle: 'Repertoire Diversity',
+    graphState: {
+        title: 'Repertoire Diversity',
+        template: 'bar',
+        currentTab: null,
     },
-    {
-      id: "chao1",
-      type: "chao1",
-      downsampling: {
-        type: "hypergeometric",
-        valueChooser: "auto"
-      },
-      isExpanded: false
+    tableState: createPlDataTableStateV2(),
+    metrics: [
+        {
+            id: 'observed',
+            type: 'observed',
+            downsampling: {
+                type: 'hypergeometric',
+                valueChooser: 'auto',
+            },
+            isExpanded: false,
+        },
+        {
+            id: 'shannonWiener',
+            type: 'shannonWiener',
+            downsampling: {
+                type: 'hypergeometric',
+                valueChooser: 'auto',
+            },
+            isExpanded: false,
+        },
+        {
+            id: 'chao1',
+            type: 'chao1',
+            downsampling: {
+                type: 'hypergeometric',
+                valueChooser: 'auto',
+            },
+            isExpanded: false,
+        },
+        {
+            id: 'gini',
+            type: 'gini',
+            downsampling: {
+                type: 'hypergeometric',
+                valueChooser: 'auto',
+            },
+            isExpanded: false,
+        },
+        {
+            id: 'd50',
+            type: 'd50',
+            downsampling: {
+                type: 'hypergeometric',
+                valueChooser: 'auto',
+            },
+            isExpanded: false,
+        },
+    ],
+})
+    .argsValid((ctx) => ctx.args.abundanceRef !== undefined
+    && ctx.args.metrics.every((metric) => metric.type !== undefined))
+    .output('abundanceOptions', (ctx) => ctx.resultPool.getOptions([{
+        axes: [
+            { name: 'pl7.app/sampleId' },
+            {},
+        ],
+        annotations: {
+            'pl7.app/isAbundance': 'true',
+            'pl7.app/abundance/normalized': 'false',
+            'pl7.app/abundance/isPrimary': 'true',
+        },
     },
-    {
-      id: "gini",
-      type: "gini",
-      downsampling: {
-        type: "hypergeometric",
-        valueChooser: "auto"
-      },
-      isExpanded: false
-    },
-    {
-      id: "d50",
-      type: "d50",
-      downsampling: {
-        type: "hypergeometric",
-        valueChooser: "auto"
-      },
-      isExpanded: false
+]))
+    .outputWithStatus('pt', (ctx) => {
+    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();
+    if (pCols === undefined) {
+        return undefined;
+    }
+    return createPlDataTableV2(ctx, pCols, ctx.uiState.tableState);
+})
+    .outputWithStatus('pf', (ctx) => {
+    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();
+    if (pCols === undefined) {
+        return undefined;
     }
-  ]
-}).argsValid((ctx) => ctx.args.abundanceRef !== void 0 && ctx.args.metrics.every((metric) => metric.type !== void 0)).output(
-  "abundanceOptions",
-  (ctx) => ctx.resultPool.getOptions([
-    {
-      axes: [
-        { name: "pl7.app/sampleId" },
-        {}
-      ],
-      annotations: {
-        "pl7.app/isAbundance": "true",
-        "pl7.app/abundance/normalized": "false",
-        "pl7.app/abundance/isPrimary": "true"
-      }
+    return createPFrameForGraphs(ctx, pCols);
+})
+    // Return a list of Pcols for plot defaults
+    .output('pcols', (ctx) => {
+    const pCols = ctx.outputs?.resolve('pf')?.getPColumns();
+    if (pCols === undefined || pCols.length === 0) {
+        return undefined;
     }
-  ])
-).output("pt", (ctx) => {
-  const pCols = ctx.outputs?.resolve("pf")?.getPColumns();
-  if (pCols === void 0) {
-    return void 0;
-  }
-  return createPlDataTableV2(ctx, pCols, ctx.uiState.tableState);
-}).output("pf", (ctx) => {
-  const pCols = ctx.outputs?.resolve("pf")?.getPColumns();
-  if (pCols === void 0) {
-    return void 0;
-  }
-  return createPFrameForGraphs(ctx, pCols);
-}).output("pcols", (ctx) => {
-  const pCols = ctx.outputs?.resolve("pf")?.getPColumns();
-  if (pCols === void 0 || pCols.length === 0) {
-    return void 0;
-  }
-  return pCols.map(
-    (c) => ({
-      columnId: c.id,
-      spec: c.spec
-    })
-  );
-}).output("isRunning", (ctx) => ctx.outputs?.getIsReadyOrError() === false).title((ctx) => ctx.uiState?.blockTitle ?? "Repertoire Diversity").sections((_) => [
-  { type: "link", href: "/", label: "Main" },
-  { type: "link", href: "/diversityGraph", label: "Diversity Graph" }
-]).done(2);
+    return pCols.map((c) => ({
+        columnId: c.id,
+        spec: c.spec,
+    }));
+})
+    .output('isRunning', (ctx) => ctx.outputs?.getIsReadyOrError() === false)
+    .title((ctx) => ctx.uiState?.blockTitle ?? 'Repertoire Diversity')
+    .sections((_) => [
+    { type: 'link', href: '/', label: 'Main' },
+    { type: 'link', href: '/diversityGraph', label: 'Diversity Graph' },
+])
+    .done(2);
 
-export { convertMetricsUiToArgs, model };
+export { model };
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-//# sourceMappingURL=index.js.map