@pcircle/memesh 2.9.2 → 2.9.3

package/dist/knowledge-graph/KGSearchEngine.js.map

@@ -0,0 +1 @@
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package/dist/knowledge-graph/index.d.ts

@@ -1,15 +1,14 @@
 import type { Entity, Relation, SearchQuery, RelationTrace } from './types.js';
-export interface SemanticSearchResult {
-    entity: Entity;
-    similarity: number;
-}
+import type { SemanticSearchResult } from './KGSearchEngine.js';
+export type { SemanticSearchResult } from './KGSearchEngine.js';
 export declare class KnowledgeGraph {
     private db;
     private queryCache;
     private vectorEnabled;
-    private vectorExt;
+    private vectorAdapter;
     private vectorInitPromise;
     private pendingEmbeddings;
+    private searchEngine;
     private constructor();
     private validateEntityName;
     private validateRelationType;
@@ -21,7 +20,19 @@ export declare class KnowledgeGraph {
     private escapeLikePattern;
     private searchFTS5;
     private prepareFTS5Query;
-    createEntity(entity: Entity): string;
+    createEntity(entity: Entity, skipEmbedding?: boolean): string;
+    createEntitiesBatch(entities: Array<{
+        name: string;
+        entityType: string;
+        observations: string[];
+        tags?: string[];
+        metadata?: Record<string, unknown>;
+        contentHash?: string;
+    }>): Array<{
+        name: string;
+        success: boolean;
+        error?: string;
+    }>;
     createRelation(relation: Relation): void;
     searchEntities(query: SearchQuery): Entity[];
     getEntity(name: string): Entity | null;
@@ -33,6 +44,7 @@ export declare class KnowledgeGraph {
     };
     deleteEntity(name: string): boolean;
     private generateEmbeddingAsync;
+    private generateBatchEmbeddingsAsync;
     semanticSearch(query: string, options?: {
         limit?: number;
         minSimilarity?: number;
@@ -42,7 +54,6 @@ export declare class KnowledgeGraph {
         limit?: number;
         minSimilarity?: number;
     }): Promise<SemanticSearchResult[]>;
-    private keywordSearchAsSemanticResults;
     isVectorSearchEnabled(): boolean;
     close(): Promise<void>;
     transaction<T>(fn: () => T): T;

package/dist/knowledge-graph/index.d.ts.map

@@ -1 +1 @@
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package/dist/knowledge-graph/index.js

@@ -6,16 +6,19 @@ import { QueryCache } from '../db/QueryCache.js';
 import { safeJsonParse, safeJsonStringify } from '../utils/json.js';
 import { getDataPath, getDataDirectory } from '../utils/PathResolver.js';
 import { validateNonEmptyString } from '../utils/validation.js';
+import { KGSearchEngine } from './KGSearchEngine.js';
+import { ContentHasher } from './ContentHasher.js';
 const MAX_ENTITY_NAME_LENGTH = 512;
 const VALID_RELATION_TYPE_PATTERN = /^[a-zA-Z_][a-zA-Z0-9_-]*$/;
-const CONTROL_CHAR_PATTERN = /[\x00-\x08\x0B\x0C\x0E-\x1F\x7F\x80-\x9F]/;
+import { CONTROL_CHAR_PATTERN } from './KGSearchEngine.js';
 export class KnowledgeGraph {
     db;
     queryCache;
     vectorEnabled = false;
-    vectorExt = null;
+    vectorAdapter = null;
     vectorInitPromise = null;
     pendingEmbeddings = new Set();
+    searchEngine;
     constructor(_dbPath, db) {
         this.db = db;
         this.queryCache = new QueryCache({
@@ -23,6 +26,14 @@ export class KnowledgeGraph {
             defaultTTL: 5 * 60 * 1000,
             debug: false,
         });
+        this.searchEngine = new KGSearchEngine({
+            db: this.db,
+            getVectorAdapter: () => this.vectorAdapter,
+            isVectorEnabled: () => this.vectorEnabled,
+            getVectorInitPromise: () => this.vectorInitPromise,
+            getEntity: (name) => this.getEntity(name),
+            queryCache: this.queryCache,
+        });
     }
     validateEntityName(name) {
         validateNonEmptyString(name, 'Entity name');
@@ -154,15 +165,22 @@ export class KnowledgeGraph {
       );
     `;
         this.db.exec(fts5Schema);
+        this.db.exec(`
+      CREATE TABLE IF NOT EXISTS embedding_hashes (
+        entity_name TEXT PRIMARY KEY,
+        hash TEXT NOT NULL
+      );
+    `);
         this.runMigrations();
         this.initVectorSearch();
     }
     initVectorSearch() {
-        this.vectorInitPromise = import('../embeddings/VectorExtension.js')
-            .then(({ VectorExtension }) => {
-            VectorExtension.loadExtension(this.db);
-            VectorExtension.createVectorTable(this.db, 384);
-            this.vectorExt = VectorExtension;
+        this.vectorInitPromise = import('../embeddings/SqliteVecAdapter.js')
+            .then(({ SqliteVecAdapter }) => {
+            const adapter = new SqliteVecAdapter();
+            adapter.loadExtension(this.db);
+            adapter.createVectorTable(this.db, 384);
+            this.vectorAdapter = adapter;
             this.vectorEnabled = true;
             logger.info('[KG] Vector search enabled (sqlite-vec loaded)');
         })
@@ -243,86 +261,15 @@ export class KnowledgeGraph {
         }
     }
     escapeLikePattern(pattern) {
-        if (typeof pattern !== 'string') {
-            throw new Error(`Pattern must be a string, got ${typeof pattern}`);
-        }
-        return pattern
-            .replace(/!/g, '!!')
-            .replace(/%/g, '!%')
-            .replace(/_/g, '!_')
-            .replace(/\[/g, '![')
-            .replace(/\]/g, '!]');
+        return this.searchEngine.escapeLikePattern(pattern);
     }
     searchFTS5(query, limit) {
-        if (!query || query.trim() === '') {
-            return [];
-        }
-        const ftsQuery = this.prepareFTS5Query(query);
-        if (!ftsQuery) {
-            return [];
-        }
-        try {
-            const results = this.db.prepare(`
-        SELECT rowid, bm25(entities_fts, 10.0, 5.0) as rank
-        FROM entities_fts
-        WHERE entities_fts MATCH ?
-        ORDER BY rank
-        LIMIT ?
-      `).all(ftsQuery, limit);
-            return results.map(r => r.rowid);
-        }
-        catch (error) {
-            logger.warn('[KG] FTS5 search failed, will use LIKE fallback:', {
-                query,
-                ftsQuery,
-                error: error instanceof Error ? error.message : String(error)
-            });
-            return [];
-        }
+        return this.searchEngine.searchFTS5(query, limit);
     }
     prepareFTS5Query(query) {
-        const MAX_QUERY_LENGTH = 10000;
-        const MAX_TOKENS = 100;
-        let normalized = query.trim().replace(/\s+/g, ' ');
-        if (!normalized) {
-            return '';
-        }
-        if (normalized.length > MAX_QUERY_LENGTH) {
-            logger.warn(`[KG] FTS5 query too long (${normalized.length} chars), truncating to ${MAX_QUERY_LENGTH}`);
-            normalized = normalized.substring(0, MAX_QUERY_LENGTH);
-        }
-        let tokens = normalized.split(' ').filter(t => t.length > 0);
-        if (tokens.length === 0) {
-            return '';
-        }
-        if (tokens.length > MAX_TOKENS) {
-            logger.warn(`[KG] FTS5 query has too many tokens (${tokens.length}), using first ${MAX_TOKENS}`);
-            tokens = tokens.slice(0, MAX_TOKENS);
-        }
-        const ftsTokens = tokens
-            .filter(token => {
-            const upper = token.toUpperCase();
-            return upper !== 'AND' && upper !== 'OR' && upper !== 'NOT' && upper !== 'NEAR';
-        })
-            .map(token => {
-            const escaped = token
-                .replace(/"/g, '""')
-                .replace(/\*/g, '')
-                .replace(/\^/g, '')
-                .replace(/:/g, '')
-                .replace(/[(){}[\]]/g, '');
-            if (!escaped) {
-                return null;
-            }
-            return `"${escaped}"*`;
-        })
-            .filter((t) => t !== null);
-        if (ftsTokens.length === 0) {
-            return '';
-        }
-        return ftsTokens.join(' OR ');
+        return this.searchEngine.prepareFTS5Query(query);
     }
-    createEntity(entity) {
+    createEntity(entity, skipEmbedding = false) {
         this.validateEntityName(entity.name);
         try {
             if (entity.contentHash) {
@@ -385,7 +332,7 @@ export class KnowledgeGraph {
                 return entity.name;
             })();
             this.queryCache.invalidatePattern(/^entities:/);
-            if (this.vectorEnabled) {
+            if (this.vectorEnabled && !skipEmbedding) {
                 this.generateEmbeddingAsync(entity.name, entity.observations);
             }
             logger.info(`[KG] Created entity: ${entity.name} (type: ${entity.entityType})`);
@@ -406,6 +353,41 @@ export class KnowledgeGraph {
             throw error;
         }
     }
+    createEntitiesBatch(entities) {
+        const results = [];
+        if (entities.length === 0) {
+            return results;
+        }
+        const transaction = this.db.transaction(() => {
+            for (const entity of entities) {
+                try {
+                    this.createEntity({
+                        name: entity.name,
+                        entityType: entity.entityType,
+                        observations: entity.observations,
+                        tags: entity.tags,
+                        metadata: entity.metadata,
+                        contentHash: entity.contentHash,
+                    }, true);
+                    results.push({ name: entity.name, success: true });
+                }
+                catch (error) {
+                    results.push({
+                        name: entity.name,
+                        success: false,
+                        error: error instanceof Error ? error.message : String(error),
+                    });
+                }
+            }
+        });
+        transaction();
+        this.queryCache.invalidatePattern(/^entities:/);
+        this.queryCache.invalidatePattern(/^stats:/);
+        if (this.vectorEnabled) {
+            this.generateBatchEmbeddingsAsync(entities, results);
+        }
+        return results;
+    }
     createRelation(relation) {
         this.validateEntityName(relation.from);
         this.validateEntityName(relation.to);
@@ -431,106 +413,7 @@ export class KnowledgeGraph {
         logger.info(`[KG] Created relation: ${relation.from} -[${relation.relationType}]-> ${relation.to}`);
     }
     searchEntities(query) {
-        const MAX_LIMIT = 1000;
-        if (query.limit === 0) {
-            return [];
-        }
-        let effectiveLimit = query.limit;
-        if (query.limit !== undefined) {
-            if (query.limit < 0) {
-                throw new ValidationError('Limit must be non-negative', {
-                    component: 'KnowledgeGraph',
-                    method: 'searchEntities',
-                    providedLimit: query.limit,
-                });
-            }
-            if (query.limit > MAX_LIMIT) {
-                logger.warn(`Limit ${query.limit} exceeds maximum, capping to ${MAX_LIMIT}`);
-                effectiveLimit = MAX_LIMIT;
-            }
-        }
-        if (query.offset !== undefined && query.offset < 0) {
-            throw new ValidationError('Offset must be non-negative', {
-                component: 'KnowledgeGraph',
-                method: 'searchEntities',
-                providedOffset: query.offset,
-            });
-        }
-        if (query.namePattern !== undefined && query.namePattern !== '') {
-            validateNonEmptyString(query.namePattern, 'Name pattern');
-            if (CONTROL_CHAR_PATTERN.test(query.namePattern)) {
-                throw new ValidationError('Name pattern must not contain control characters', {
-                    component: 'KnowledgeGraph',
-                    method: 'searchEntities',
-                    namePattern: query.namePattern.slice(0, 100),
-                });
-            }
-        }
-        const cacheKeyQuery = { ...query, limit: effectiveLimit };
-        const cacheKey = `entities:${JSON.stringify(cacheKeyQuery)}`;
-        const cached = this.queryCache.get(cacheKey);
-        if (cached) {
-            return cached;
-        }
-        let sql = `
-      SELECT e.*,
-        (SELECT json_group_array(content) FROM observations o WHERE o.entity_id = e.id) as observations_json,
-        (SELECT json_group_array(tag) FROM tags t WHERE t.entity_id = e.id) as tags_json
-      FROM entities e
-      WHERE 1=1
-    `;
-        const params = [];
-        if (query.entityType) {
-            sql += ' AND e.type = ?';
-            params.push(query.entityType);
-        }
-        if (query.tag) {
-            sql += ' AND e.id IN (SELECT entity_id FROM tags WHERE tag = ?)';
-            params.push(query.tag);
-        }
-        if (query.namePattern) {
-            const ftsResults = this.searchFTS5(query.namePattern, effectiveLimit || 100);
-            if (ftsResults.length > 0) {
-                sql += ' AND e.id IN (' + ftsResults.map(() => '?').join(',') + ')';
-                params.push(...ftsResults);
-            }
-            else {
-                sql += " AND (e.name LIKE ? ESCAPE '!' OR e.id IN (SELECT entity_id FROM observations WHERE content LIKE ? ESCAPE '!'))";
-                const escapedPattern = `%${this.escapeLikePattern(query.namePattern)}%`;
-                params.push(escapedPattern);
-                params.push(escapedPattern);
-            }
-        }
-        sql += ' ORDER BY e.created_at DESC';
-        if (effectiveLimit !== undefined) {
-            sql += ' LIMIT ?';
-            params.push(effectiveLimit);
-        }
-        if (query.offset !== undefined) {
-            sql += ' OFFSET ?';
-            params.push(query.offset);
-        }
-        const stmt = this.db.prepare(sql);
-        const rows = stmt.all(...params);
-        const entities = new Array(rows.length);
-        for (let i = 0; i < rows.length; i++) {
-            const r = rows[i];
-            const observations = safeJsonParse(r.observations_json, [])
-                .filter(value => value);
-            const tags = safeJsonParse(r.tags_json, [])
-                .filter(value => value);
-            entities[i] = {
-                id: r.id,
-                name: r.name,
-                entityType: r.type,
-                observations,
-                tags,
-                metadata: r.metadata ? safeJsonParse(r.metadata, {}) : {},
-                createdAt: new Date(r.created_at)
-            };
-        }
-        this.queryCache.set(cacheKey, entities);
-        return entities;
+        return this.searchEngine.searchEntities(query);
     }
     getEntity(name) {
         this.validateEntityName(name);
@@ -636,9 +519,9 @@ export class KnowledgeGraph {
           VALUES('delete', ?, ?, ?)
         `).run(entity.id, existingFts.name, existingFts.observations);
             }
-            if (this.vectorEnabled && this.vectorExt) {
+            if (this.vectorEnabled && this.vectorAdapter) {
                 try {
-                    this.vectorExt.deleteEmbedding(this.db, name);
+                    this.vectorAdapter.deleteEmbedding(this.db, name);
                 }
                 catch (error) {
                     logger.warn('[KG] Failed to delete embedding during entity removal', {
@@ -647,6 +530,11 @@ export class KnowledgeGraph {
                     });
                 }
             }
+            try {
+                this.db.prepare('DELETE FROM embedding_hashes WHERE entity_name = ?').run(name);
+            }
+            catch {
+            }
             const stmt = this.db.prepare('DELETE FROM entities WHERE name = ?');
             return stmt.run(name);
         })();
@@ -658,20 +546,33 @@ export class KnowledgeGraph {
         return result.changes > 0;
     }
     generateEmbeddingAsync(entityName, observations) {
-        if (!this.vectorExt)
+        if (!this.vectorAdapter)
             return;
         const text = [entityName, ...(observations || [])].join(' ');
-        const ext = this.vectorExt;
+        const adapter = this.vectorAdapter;
+        const newHash = ContentHasher.hashEmbeddingSource(entityName, observations || []);
+        try {
+            const existing = this.db
+                .prepare('SELECT hash FROM embedding_hashes WHERE entity_name = ?')
+                .get(entityName);
+            if (existing && existing.hash === newHash) {
+                logger.debug(`[KG] Embedding hash unchanged, skipping: ${entityName}`);
+                return;
+            }
+        }
+        catch {
+        }
         const task = (async () => {
             try {
                 const { LazyEmbeddingService } = await import('../embeddings/EmbeddingService.js');
                 const service = await LazyEmbeddingService.get();
                 const embedding = await service.encode(text);
-                ext.insertEmbedding(this.db, entityName, embedding);
+                adapter.insertEmbedding(this.db, entityName, embedding);
+                this.db.prepare('INSERT OR REPLACE INTO embedding_hashes (entity_name, hash) VALUES (?, ?)').run(entityName, newHash);
                 logger.debug(`[KG] Embedding generated for: ${entityName}`);
             }
             catch (error) {
-                logger.debug('[KG] Embedding generation skipped', {
+                logger.warn('[KG] Embedding generation failed', {
                     entity: entityName,
                     reason: error instanceof Error ? error.message : String(error),
                 });
@@ -680,65 +581,69 @@ export class KnowledgeGraph {
         this.pendingEmbeddings.add(task);
         task.finally(() => this.pendingEmbeddings.delete(task));
     }
-    async semanticSearch(query, options = {}) {
-        const { limit = 10, minSimilarity = 0.3 } = options;
-        if (this.vectorInitPromise) {
-            await this.vectorInitPromise;
-        }
-        if (!this.vectorEnabled || !this.vectorExt) {
-            return this.keywordSearchAsSemanticResults(query, limit);
-        }
-        try {
-            const { LazyEmbeddingService } = await import('../embeddings/EmbeddingService.js');
-            const service = await LazyEmbeddingService.get();
-            const queryEmbedding = await service.encode(query);
-            const knnResults = this.vectorExt.knnSearch(this.db, queryEmbedding, limit * 2);
-            const results = [];
-            for (const knn of knnResults) {
-                const similarity = 1 - knn.distance;
-                if (similarity < minSimilarity)
-                    continue;
-                const entity = this.getEntity(knn.entityName);
-                if (!entity)
+    generateBatchEmbeddingsAsync(entities, results) {
+        if (!this.vectorAdapter)
+            return;
+        const adapter = this.vectorAdapter;
+        const toEmbed = [];
+        for (let i = 0; i < entities.length; i++) {
+            if (!results[i]?.success)
+                continue;
+            const entity = entities[i];
+            const newHash = ContentHasher.hashEmbeddingSource(entity.name, entity.observations);
+            try {
+                const existing = this.db
+                    .prepare('SELECT hash FROM embedding_hashes WHERE entity_name = ?')
+                    .get(entity.name);
+                if (existing && existing.hash === newHash) {
+                    logger.debug(`[KG] Batch: embedding hash unchanged, skipping: ${entity.name}`);
                     continue;
-                results.push({ entity, similarity });
+                }
             }
-            return results.slice(0, limit);
-        }
-        catch (error) {
-            logger.warn('[KG] Semantic search failed, falling back to keyword', {
-                error: error instanceof Error ? error.message : String(error),
+            catch {
+            }
+            toEmbed.push({
+                name: entity.name,
+                text: [entity.name, ...entity.observations].join(' '),
+                hash: newHash,
             });
-            return this.keywordSearchAsSemanticResults(query, limit);
-        }
-    }
-    async hybridSearch(query, options = {}) {
-        const { limit = 10, minSimilarity = 0.3 } = options;
-        const keywordResults = this.keywordSearchAsSemanticResults(query, limit);
-        if (this.vectorInitPromise) {
-            await this.vectorInitPromise;
-        }
-        if (!this.vectorEnabled) {
-            return keywordResults;
-        }
-        const semanticResults = await this.semanticSearch(query, { limit, minSimilarity });
-        const merged = new Map();
-        for (const r of keywordResults) {
-            merged.set(r.entity.name, r);
         }
-        for (const r of semanticResults) {
-            const existing = merged.get(r.entity.name);
-            if (!existing || r.similarity > existing.similarity) {
-                merged.set(r.entity.name, r);
+        if (toEmbed.length === 0)
+            return;
+        const task = (async () => {
+            try {
+                const { LazyEmbeddingService } = await import('../embeddings/EmbeddingService.js');
+                const service = await LazyEmbeddingService.get();
+                const embeddings = await service.encodeBatch(toEmbed.map(e => e.text));
+                for (let i = 0; i < toEmbed.length; i++) {
+                    try {
+                        adapter.insertEmbedding(this.db, toEmbed[i].name, embeddings[i]);
+                        this.db.prepare('INSERT OR REPLACE INTO embedding_hashes (entity_name, hash) VALUES (?, ?)').run(toEmbed[i].name, toEmbed[i].hash);
+                    }
+                    catch (error) {
+                        logger.warn('[KG] Batch embedding insert failed', {
+                            entity: toEmbed[i].name,
+                            reason: error instanceof Error ? error.message : String(error),
+                        });
+                    }
+                }
+                logger.debug(`[KG] Batch embeddings generated for ${toEmbed.length} entities`);
             }
-        }
-        return Array.from(merged.values())
-            .sort((a, b) => b.similarity - a.similarity)
-            .slice(0, limit);
+            catch (error) {
+                logger.warn('[KG] Batch embedding generation failed', {
+                    count: toEmbed.length,
+                    reason: error instanceof Error ? error.message : String(error),
+                });
+            }
+        })();
+        this.pendingEmbeddings.add(task);
+        task.finally(() => this.pendingEmbeddings.delete(task));
     }
-    keywordSearchAsSemanticResults(query, limit) {
-        const entities = this.searchEntities({ namePattern: query, limit });
-        return entities.map(entity => ({ entity, similarity: 0.5 }));
+    async semanticSearch(query, options = {}) {
+        return this.searchEngine.semanticSearch(query, options);
+    }
+    async hybridSearch(query, options = {}) {
+        return this.searchEngine.hybridSearch(query, options);
     }
     isVectorSearchEnabled() {
         return this.vectorEnabled;