@optave/codegraph 3.11.0 → 3.11.1

package/dist/domain/analysis/module-map.js

@@ -166,25 +166,12 @@ function computeQualityMetrics(db, testFilter, fpThreshold = FALSE_POSITIVE_CALL
         .prepare("SELECT COUNT(*) as c FROM edges WHERE kind = 'calls' AND confidence >= 0.7")
         .get().c;
     const callConfidence = totalCallEdges > 0 ? highConfCallEdges / totalCallEdges : 0;
-    const fpRows = db
-        .prepare(`
-      SELECT n.name, n.file, n.line, COUNT(e.source_id) as caller_count
-      FROM nodes n
-      LEFT JOIN edges e ON n.id = e.target_id AND e.kind = 'calls'
-      WHERE n.kind IN ('function', 'method')
-      GROUP BY n.id
-      HAVING caller_count > ?
-      ORDER BY caller_count DESC
-    `)
-        .all(fpThreshold);
-    const falsePositiveWarnings = fpRows
-        .filter((r) => FALSE_POSITIVE_NAMES.has(r.name.includes('.') ? r.name.split('.').pop() : r.name))
-        .map((r) => ({ name: r.name, file: r.file, line: r.line, callerCount: r.caller_count }));
+    const falsePositiveWarnings = buildFalsePositiveWarnings(queryFalsePositiveRows(db, fpThreshold));
     let fpEdgeCount = 0;
     for (const fp of falsePositiveWarnings)
         fpEdgeCount += fp.callerCount;
     const falsePositiveRatio = totalCallEdges > 0 ? fpEdgeCount / totalCallEdges : 0;
-    const score = Math.round(callerCoverage * 40 + callConfidence * 40 + (1 - falsePositiveRatio) * 20);
+    const score = computeQualityScore(callerCoverage, callConfidence, falsePositiveRatio);
     return {
         score,
         callerCoverage: {
@@ -287,119 +274,143 @@ export function moduleMapData(customDbPath, limit = 20, opts = {}) {
         db.close();
     }
 }
+/** SQL query for false-positive caller counts above a threshold (shared by native and JS paths). */
+function queryFalsePositiveRows(db, fpThreshold) {
+    return db
+        .prepare(`
+      SELECT n.name, n.file, n.line, COUNT(e.source_id) as caller_count
+      FROM nodes n
+      LEFT JOIN edges e ON n.id = e.target_id AND e.kind = 'calls'
+      WHERE n.kind IN ('function', 'method')
+      GROUP BY n.id
+      HAVING caller_count > ?
+      ORDER BY caller_count DESC
+    `)
+        .all(fpThreshold);
+}
+/** Filter false-positive rows by the configured name set and shape them for the report. */
+function buildFalsePositiveWarnings(rows) {
+    return rows
+        .filter((r) => FALSE_POSITIVE_NAMES.has(r.name.includes('.') ? r.name.split('.').pop() : r.name))
+        .map((r) => ({ name: r.name, file: r.file, line: r.line, callerCount: r.caller_count }));
+}
+/** Compute the composite quality score (0-100) from coverage, confidence, and FP ratio. */
+function computeQualityScore(callerCoverage, callConfidence, falsePositiveRatio) {
+    return Math.round(callerCoverage * 40 + callConfidence * 40 + (1 - falsePositiveRatio) * 20);
+}
+/** Aggregate role counts and derive the `dead` total. */
+function aggregateRolesFromNative(roleCounts) {
+    const roles = {};
+    let deadTotal = 0;
+    for (const r of roleCounts) {
+        roles[r.role] = r.count;
+        if (r.role.startsWith(DEAD_ROLE_PREFIX))
+            deadTotal += r.count;
+    }
+    if (deadTotal > 0)
+        roles.dead = deadTotal;
+    return roles;
+}
+/** Build the native fast-path stats result by combining native aggregations with JS-only sections. */
+function buildStatsFromNative(db, nativeStats, config, jsSections) {
+    const s = nativeStats;
+    const nodesByKind = {};
+    for (const k of s.nodesByKind)
+        nodesByKind[k.kind] = k.count;
+    const edgesByKind = {};
+    for (const k of s.edgesByKind)
+        edgesByKind[k.kind] = k.count;
+    const roles = aggregateRolesFromNative(s.roleCounts);
+    const callerCoverage = s.quality.callableTotal > 0 ? s.quality.callableWithCallers / s.quality.callableTotal : 0;
+    const callConfidence = s.quality.callEdges > 0 ? s.quality.highConfCallEdges / s.quality.callEdges : 0;
+    // False-positive analysis still uses JS (needs FALSE_POSITIVE_NAMES set)
+    const fpThreshold = config.analysis?.falsePositiveCallers ?? FALSE_POSITIVE_CALLER_THRESHOLD;
+    const falsePositiveWarnings = buildFalsePositiveWarnings(queryFalsePositiveRows(db, fpThreshold));
+    let fpEdgeCount = 0;
+    for (const fp of falsePositiveWarnings)
+        fpEdgeCount += fp.callerCount;
+    const falsePositiveRatio = s.quality.callEdges > 0 ? fpEdgeCount / s.quality.callEdges : 0;
+    const score = computeQualityScore(callerCoverage, callConfidence, falsePositiveRatio);
+    return {
+        nodes: { total: s.totalNodes, byKind: nodesByKind },
+        edges: { total: s.totalEdges, byKind: edgesByKind },
+        files: jsSections.files,
+        cycles: { fileLevel: jsSections.fileCycles.length, functionLevel: jsSections.fnCycles.length },
+        hotspots: s.hotspots.map((h) => ({ file: h.file, fanIn: h.fanIn, fanOut: h.fanOut })),
+        embeddings: s.embeddings
+            ? {
+                count: s.embeddings.count,
+                model: s.embeddings.model,
+                dim: s.embeddings.dim,
+                builtAt: s.embeddings.builtAt,
+            }
+            : null,
+        quality: {
+            score,
+            callerCoverage: {
+                ratio: callerCoverage,
+                covered: s.quality.callableWithCallers,
+                total: s.quality.callableTotal,
+            },
+            callConfidence: {
+                ratio: callConfidence,
+                highConf: s.quality.highConfCallEdges,
+                total: s.quality.callEdges,
+            },
+            falsePositiveWarnings,
+        },
+        roles,
+        complexity: s.complexity
+            ? {
+                analyzed: s.complexity.analyzed,
+                avgCognitive: s.complexity.avgCognitive,
+                avgCyclomatic: s.complexity.avgCyclomatic,
+                maxCognitive: s.complexity.maxCognitive,
+                maxCyclomatic: s.complexity.maxCyclomatic,
+                avgMI: s.complexity.avgMi,
+                minMI: s.complexity.minMi,
+            }
+            : null,
+    };
+}
+/** Build the JS-fallback stats result using SQL aggregations from the helpers above. */
+function buildStatsFromJs(db, noTests, config, jsSections) {
+    const testFilter = testFilterSQL('n.file', noTests);
+    const { total: totalNodes, byKind: nodesByKind } = countNodesByKind(db, noTests);
+    const { total: totalEdges, byKind: edgesByKind } = countEdgesByKind(db, noTests);
+    const hotspots = findHotspots(db, noTests, 5);
+    const embeddings = getEmbeddingsInfo(db);
+    const fpThreshold = config.analysis?.falsePositiveCallers ?? FALSE_POSITIVE_CALLER_THRESHOLD;
+    const quality = computeQualityMetrics(db, testFilter, fpThreshold);
+    const roles = countRoles(db, noTests);
+    const complexity = getComplexitySummary(db, testFilter);
+    return {
+        nodes: { total: totalNodes, byKind: nodesByKind },
+        edges: { total: totalEdges, byKind: edgesByKind },
+        files: jsSections.files,
+        cycles: { fileLevel: jsSections.fileCycles.length, functionLevel: jsSections.fnCycles.length },
+        hotspots,
+        embeddings,
+        quality,
+        roles,
+        complexity,
+    };
+}
 export function statsData(customDbPath, opts = {}) {
     const { db, nativeDb, close } = openReadonlyWithNative(customDbPath);
     try {
         const noTests = opts.noTests || false;
         const config = opts.config || loadConfig();
         // These always need JS (non-SQL logic)
-        const files = countFilesByLanguage(db, noTests);
-        const fileCycles = findCycles(db, { fileLevel: true, noTests });
-        const fnCycles = findCycles(db, { fileLevel: false, noTests });
-        // ── Native fast path: batch all SQL aggregations in one napi call ──
-        if (nativeDb?.getGraphStats) {
-            const s = nativeDb.getGraphStats(noTests);
-            const nodesByKind = {};
-            for (const k of s.nodesByKind)
-                nodesByKind[k.kind] = k.count;
-            const edgesByKind = {};
-            for (const k of s.edgesByKind)
-                edgesByKind[k.kind] = k.count;
-            const roles = {};
-            let deadTotal = 0;
-            for (const r of s.roleCounts) {
-                roles[r.role] = r.count;
-                if (r.role.startsWith(DEAD_ROLE_PREFIX))
-                    deadTotal += r.count;
-            }
-            if (deadTotal > 0)
-                roles.dead = deadTotal;
-            const callerCoverage = s.quality.callableTotal > 0 ? s.quality.callableWithCallers / s.quality.callableTotal : 0;
-            const callConfidence = s.quality.callEdges > 0 ? s.quality.highConfCallEdges / s.quality.callEdges : 0;
-            // False-positive analysis still uses JS (needs FALSE_POSITIVE_NAMES set)
-            const fpThreshold = config.analysis?.falsePositiveCallers ?? FALSE_POSITIVE_CALLER_THRESHOLD;
-            const fpRows = db
-                .prepare(`
-          SELECT n.name, n.file, n.line, COUNT(e.source_id) as caller_count
-          FROM nodes n
-          LEFT JOIN edges e ON n.id = e.target_id AND e.kind = 'calls'
-          WHERE n.kind IN ('function', 'method')
-          GROUP BY n.id
-          HAVING caller_count > ?
-          ORDER BY caller_count DESC
-        `)
-                .all(fpThreshold);
-            const falsePositiveWarnings = fpRows
-                .filter((r) => FALSE_POSITIVE_NAMES.has(r.name.includes('.') ? r.name.split('.').pop() : r.name))
-                .map((r) => ({ name: r.name, file: r.file, line: r.line, callerCount: r.caller_count }));
-            let fpEdgeCount = 0;
-            for (const fp of falsePositiveWarnings)
-                fpEdgeCount += fp.callerCount;
-            const falsePositiveRatio = s.quality.callEdges > 0 ? fpEdgeCount / s.quality.callEdges : 0;
-            const score = Math.round(callerCoverage * 40 + callConfidence * 40 + (1 - falsePositiveRatio) * 20);
-            return {
-                nodes: { total: s.totalNodes, byKind: nodesByKind },
-                edges: { total: s.totalEdges, byKind: edgesByKind },
-                files,
-                cycles: { fileLevel: fileCycles.length, functionLevel: fnCycles.length },
-                hotspots: s.hotspots.map((h) => ({ file: h.file, fanIn: h.fanIn, fanOut: h.fanOut })),
-                embeddings: s.embeddings
-                    ? {
-                        count: s.embeddings.count,
-                        model: s.embeddings.model,
-                        dim: s.embeddings.dim,
-                        builtAt: s.embeddings.builtAt,
-                    }
-                    : null,
-                quality: {
-                    score,
-                    callerCoverage: {
-                        ratio: callerCoverage,
-                        covered: s.quality.callableWithCallers,
-                        total: s.quality.callableTotal,
-                    },
-                    callConfidence: {
-                        ratio: callConfidence,
-                        highConf: s.quality.highConfCallEdges,
-                        total: s.quality.callEdges,
-                    },
-                    falsePositiveWarnings,
-                },
-                roles,
-                complexity: s.complexity
-                    ? {
-                        analyzed: s.complexity.analyzed,
-                        avgCognitive: s.complexity.avgCognitive,
-                        avgCyclomatic: s.complexity.avgCyclomatic,
-                        maxCognitive: s.complexity.maxCognitive,
-                        maxCyclomatic: s.complexity.maxCyclomatic,
-                        avgMI: s.complexity.avgMi,
-                        minMI: s.complexity.minMi,
-                    }
-                    : null,
-            };
-        }
-        // ── JS fallback ───────────────────────────────────────────────────
-        const testFilter = testFilterSQL('n.file', noTests);
-        const { total: totalNodes, byKind: nodesByKind } = countNodesByKind(db, noTests);
-        const { total: totalEdges, byKind: edgesByKind } = countEdgesByKind(db, noTests);
-        const hotspots = findHotspots(db, noTests, 5);
-        const embeddings = getEmbeddingsInfo(db);
-        const fpThreshold = config.analysis?.falsePositiveCallers ?? FALSE_POSITIVE_CALLER_THRESHOLD;
-        const quality = computeQualityMetrics(db, testFilter, fpThreshold);
-        const roles = countRoles(db, noTests);
-        const complexity = getComplexitySummary(db, testFilter);
-        return {
-            nodes: { total: totalNodes, byKind: nodesByKind },
-            edges: { total: totalEdges, byKind: edgesByKind },
-            files,
-            cycles: { fileLevel: fileCycles.length, functionLevel: fnCycles.length },
-            hotspots,
-            embeddings,
-            quality,
-            roles,
-            complexity,
+        const jsSections = {
+            files: countFilesByLanguage(db, noTests),
+            fileCycles: findCycles(db, { fileLevel: true, noTests }),
+            fnCycles: findCycles(db, { fileLevel: false, noTests }),
         };
+        const nativeStats = nativeDb?.getGraphStats?.(noTests);
+        return nativeStats
+            ? buildStatsFromNative(db, nativeStats, config, jsSections)
+            : buildStatsFromJs(db, noTests, config, jsSections);
     }
     finally {
         close();

package/dist/domain/analysis/module-map.js.map

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package/dist/domain/graph/builder/helpers.d.ts

@@ -12,14 +12,14 @@ export declare function passesIncludeExclude(relPath: string, includeRegexes: re
  * Recursively collect all source files under `dir`.
  * When `directories` is a Set, also tracks which directories contain files.
  *
- * The first invocation establishes `dir` as the project root against which
- * `config.include` / `config.exclude` globs are matched.
+ * `dir` establishes the project root against which `config.include` /
+ * `config.exclude` globs are matched.
  */
-export declare function collectFiles(dir: string, files: string[], config: Partial<CodegraphConfig>, directories: Set<string>, _visited?: Set<string>, _rootDir?: string, _includeRegexes?: readonly RegExp[], _excludeRegexes?: readonly RegExp[]): {
+export declare function collectFiles(dir: string, files: string[], config: Partial<CodegraphConfig>, directories: Set<string>): {
     files: string[];
     directories: Set<string>;
 };
-export declare function collectFiles(dir: string, files?: string[], config?: Partial<CodegraphConfig>, directories?: null, _visited?: Set<string>, _rootDir?: string, _includeRegexes?: readonly RegExp[], _excludeRegexes?: readonly RegExp[]): string[];
+export declare function collectFiles(dir: string, files?: string[], config?: Partial<CodegraphConfig>, directories?: null): string[];
 /**
  * Load path aliases from tsconfig.json / jsconfig.json.
  */

package/dist/domain/graph/builder/helpers.d.ts.map

@@ -1 +1 @@
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package/dist/domain/graph/builder/helpers.js

@@ -68,63 +68,77 @@ export function passesIncludeExclude(relPath, includeRegexes, excludeRegexes) {
         return false;
     return true;
 }
-export function collectFiles(dir, files = [], config = {}, directories = null, _visited = new Set(), _rootDir, _includeRegexes, _excludeRegexes) {
-    const trackDirs = directories instanceof Set;
-    let hasFiles = false;
-    // First call: compute root and compile include/exclude patterns once,
-    // then pass them down recursive calls so we don't recompile per directory.
-    const rootDir = _rootDir ?? dir;
-    const includeRegexes = _includeRegexes ?? compileGlobs(config.include);
-    const excludeRegexes = _excludeRegexes ?? compileGlobs(config.exclude);
-    const hasGlobFilters = includeRegexes.length > 0 || excludeRegexes.length > 0;
-    // Merge config ignoreDirs with defaults
-    const extraIgnore = config.ignoreDirs ? new Set(config.ignoreDirs) : null;
-    // Detect symlink loops (before I/O to avoid wasted readdirSync)
+/** Detect a symlink loop for `dir`. Returns true if `dir` was already visited. */
+function isSymlinkLoop(dir, visited) {
     let realDir;
     try {
         realDir = fs.realpathSync(dir);
     }
     catch {
-        return trackDirs ? { files, directories: directories } : files;
+        return true;
     }
-    if (_visited.has(realDir)) {
+    if (visited.has(realDir)) {
         warn(`Symlink loop detected, skipping: ${dir}`);
-        return trackDirs ? { files, directories: directories } : files;
+        return true;
     }
-    _visited.add(realDir);
-    let entries;
+    visited.add(realDir);
+    return false;
+}
+/** Read directory entries, returning null on error (already logged). */
+function readDirSafe(dir) {
     try {
-        entries = fs.readdirSync(dir, { withFileTypes: true });
+        return fs.readdirSync(dir, { withFileTypes: true });
     }
     catch (err) {
         warn(`Cannot read directory ${dir}: ${err.message}`);
-        return trackDirs ? { files, directories: directories } : files;
+        return null;
     }
+}
+/** True if `entry` is a source file we should collect under `ctx`. */
+function isCollectableSourceFile(full, entry, ctx) {
+    if (!EXTENSIONS.has(path.extname(entry.name)))
+        return false;
+    if (!ctx.hasGlobFilters)
+        return true;
+    const rel = normalizePath(path.relative(ctx.rootDir, full));
+    return passesIncludeExclude(rel, ctx.includeRegexes, ctx.excludeRegexes);
+}
+function walkCollect(dir, files, directories, ctx) {
+    if (isSymlinkLoop(dir, ctx.visited))
+        return;
+    const entries = readDirSafe(dir);
+    if (!entries)
+        return;
+    let hasFiles = false;
     for (const entry of entries) {
-        if (shouldSkipEntry(entry, extraIgnore))
+        if (shouldSkipEntry(entry, ctx.extraIgnore))
             continue;
         const full = path.join(dir, entry.name);
         if (entry.isDirectory()) {
-            if (trackDirs) {
-                collectFiles(full, files, config, directories, _visited, rootDir, includeRegexes, excludeRegexes);
-            }
-            else {
-                collectFiles(full, files, config, null, _visited, rootDir, includeRegexes, excludeRegexes);
-            }
+            walkCollect(full, files, directories, ctx);
         }
-        else if (EXTENSIONS.has(path.extname(entry.name))) {
-            if (hasGlobFilters) {
-                const rel = normalizePath(path.relative(rootDir, full));
-                if (!passesIncludeExclude(rel, includeRegexes, excludeRegexes))
-                    continue;
-            }
+        else if (isCollectableSourceFile(full, entry, ctx)) {
             files.push(full);
             hasFiles = true;
         }
     }
-    if (trackDirs && hasFiles) {
+    if (directories && hasFiles) {
         directories.add(dir);
     }
+}
+export function collectFiles(dir, files = [], config = {}, directories = null) {
+    const trackDirs = directories instanceof Set;
+    const includeRegexes = compileGlobs(config.include);
+    const excludeRegexes = compileGlobs(config.exclude);
+    const ctx = {
+        rootDir: dir,
+        includeRegexes,
+        excludeRegexes,
+        hasGlobFilters: includeRegexes.length > 0 || excludeRegexes.length > 0,
+        extraIgnore: config.ignoreDirs ? new Set(config.ignoreDirs) : null,
+        visited: new Set(),
+    };
+    walkCollect(dir, files, trackDirs ? directories : null, ctx);
     return trackDirs ? { files, directories: directories } : files;
 }
 /**

package/dist/domain/graph/builder/helpers.js.map

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package/dist/domain/graph/builder/incremental.d.ts

@@ -16,6 +16,11 @@ export interface IncrementalStmts {
             c: number;
         } | undefined;
     };
+    countEdges: {
+        get: (...params: unknown[]) => {
+            c: number;
+        } | undefined;
+    };
     listSymbols: {
         all: (...params: unknown[]) => unknown[];
     };
@@ -31,6 +36,7 @@ interface RebuildResult {
     nodesAdded: number;
     nodesRemoved: number;
     edgesAdded: number;
+    edgesBefore: number;
     deleted?: boolean;
     event?: string;
     symbolDiff?: unknown;

package/dist/domain/graph/builder/incremental.d.ts.map

@@ -1 +1 @@
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