@opentrons/shared-data 0.0.1-alpha.19 → 0.0.1-alpha.21
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/lib/{bundle.673284981fd97184260c.js → opentrons-shared-data.js} +2 -2
- package/lib/opentrons-shared-data.js.map +1 -0
- package/package.json +1 -1
- package/webpack.config.js +1 -0
- package/js/__tests__/__snapshots__/pipettes.test.ts.snap +0 -5969
- package/js/__tests__/deckSchemas.test.ts +0 -87
- package/js/__tests__/errors.test.js +0 -21
- package/js/__tests__/getAreSlotsAdjacent.test.ts +0 -128
- package/js/__tests__/getWellNamePerMultiTip.test.ts +0 -162
- package/js/__tests__/labwareDefQuirks.test.ts +0 -37
- package/js/__tests__/labwareDefSchemaV1.test.ts +0 -82
- package/js/__tests__/labwareDefSchemaV2.test.ts +0 -298
- package/js/__tests__/moduleAccessors.test.ts +0 -50
- package/js/__tests__/moduleSpecsSchema.test.ts +0 -77
- package/js/__tests__/pipetteSchemaV2.test.ts +0 -107
- package/js/__tests__/pipetteSpecSchemas.test.ts +0 -48
- package/js/__tests__/pipettes.test.ts +0 -58
- package/js/__tests__/protocolSchemaV4.test.ts +0 -137
- package/js/__tests__/protocolSchemaV5.test.ts +0 -137
- package/js/__tests__/protocolSchemaV6.test.ts +0 -132
- package/js/__tests__/protocolSchemaV7.test.ts +0 -64
- package/js/__tests__/protocolValidation.test.ts +0 -83
- package/js/__tests__/sortWells.test.ts +0 -40
- package/js/__tests__/splitWellsOnColumn.test.ts +0 -21
- package/js/__tests__/validateErrors.test.js +0 -34
- package/js/constants.ts +0 -338
- package/js/cypressUtils.ts +0 -35
- package/js/errors.ts +0 -33
- package/js/fixtures.ts +0 -161
- package/js/getLabware.ts +0 -154
- package/js/gripper.ts +0 -29
- package/js/helpers/__tests__/getAdapterName.test.ts +0 -31
- package/js/helpers/__tests__/getDeckDefFromLoadedLabware.test.ts +0 -12
- package/js/helpers/__tests__/getVectorDifference.test.ts +0 -25
- package/js/helpers/__tests__/getVectorSum.test.ts +0 -21
- package/js/helpers/__tests__/labwareInference.test.ts +0 -84
- package/js/helpers/__tests__/orderWells.test.ts +0 -87
- package/js/helpers/__tests__/parseProtocolData.test.ts +0 -165
- package/js/helpers/__tests__/volume.test.ts +0 -108
- package/js/helpers/__tests__/wellSets.test.ts +0 -352
- package/js/helpers/get96Channel384WellPlateWells.ts +0 -44
- package/js/helpers/getAddressableAreasInProtocol.ts +0 -59
- package/js/helpers/getLoadedLabwareDefinitionsByUri.ts +0 -30
- package/js/helpers/getModuleVizDims.ts +0 -118
- package/js/helpers/getOccludedSlotCountForModule.ts +0 -13
- package/js/helpers/getVectorDifference.ts +0 -12
- package/js/helpers/getVectorSum.ts +0 -12
- package/js/helpers/getWellNamePerMultiTip.ts +0 -86
- package/js/helpers/getWellTotalVolume.ts +0 -16
- package/js/helpers/index.ts +0 -347
- package/js/helpers/labwareInference.ts +0 -92
- package/js/helpers/orderWells.ts +0 -69
- package/js/helpers/parseProtocolData.ts +0 -141
- package/js/helpers/volume.ts +0 -35
- package/js/helpers/wellIsRect.ts +0 -6
- package/js/helpers/wellSets.ts +0 -155
- package/js/index.ts +0 -14
- package/js/labwareTools/__tests__/__snapshots__/createIrregularLabware.test.ts.snap +0 -3
- package/js/labwareTools/__tests__/__snapshots__/createLabware.test.ts.snap +0 -3
- package/js/labwareTools/__tests__/createDefaultDisplayName.test.ts +0 -111
- package/js/labwareTools/__tests__/createIrregularLabware.test.ts +0 -226
- package/js/labwareTools/__tests__/createLabware.test.ts +0 -147
- package/js/labwareTools/index.ts +0 -452
- package/js/modules.ts +0 -97
- package/js/pipettes.ts +0 -89
- package/js/protocols.ts +0 -290
- package/js/schema.ts +0 -80
- package/js/scripts/generateDeckLayersFromSVG.js +0 -46
- package/js/titleCase.ts +0 -30
- package/js/types.ts +0 -600
- package/lib/bundle.673284981fd97184260c.js.map +0 -1
- package/python/.coveragerc +0 -4
- package/python/.flake8 +0 -32
- package/python/Config.in +0 -10
- package/python/Makefile +0 -134
- package/python/Pipfile +0 -28
- package/python/Pipfile.lock +0 -645
- package/python/buildroot.mk +0 -30
- package/python/mypy.ini +0 -41
- package/python/opentrons_shared_data/__init__.py +0 -17
- package/python/opentrons_shared_data/_version.py +0 -20
- package/python/opentrons_shared_data/command/__init__.py +0 -52
- package/python/opentrons_shared_data/deck/__init__.py +0 -96
- package/python/opentrons_shared_data/deck/dev_types.py +0 -180
- package/python/opentrons_shared_data/errors/__init__.py +0 -30
- package/python/opentrons_shared_data/errors/categories.py +0 -60
- package/python/opentrons_shared_data/errors/codes.py +0 -108
- package/python/opentrons_shared_data/errors/exceptions.py +0 -915
- package/python/opentrons_shared_data/gripper/__init__.py +0 -63
- package/python/opentrons_shared_data/gripper/constants.py +0 -6
- package/python/opentrons_shared_data/gripper/gripper_definition.py +0 -101
- package/python/opentrons_shared_data/labware/__init__.py +0 -22
- package/python/opentrons_shared_data/labware/constants.py +0 -7
- package/python/opentrons_shared_data/labware/dev_types.py +0 -140
- package/python/opentrons_shared_data/labware/labware_definition.py +0 -328
- package/python/opentrons_shared_data/load.py +0 -57
- package/python/opentrons_shared_data/module/__init__.py +0 -74
- package/python/opentrons_shared_data/module/dev_types.py +0 -141
- package/python/opentrons_shared_data/pipette/__init__.py +0 -107
- package/python/opentrons_shared_data/pipette/dev_types.py +0 -177
- package/python/opentrons_shared_data/pipette/file_operation_helpers.py +0 -37
- package/python/opentrons_shared_data/pipette/load_data.py +0 -261
- package/python/opentrons_shared_data/pipette/model_constants.py +0 -123
- package/python/opentrons_shared_data/pipette/mutable_configurations.py +0 -431
- package/python/opentrons_shared_data/pipette/pipette_definition.py +0 -503
- package/python/opentrons_shared_data/pipette/pipette_load_name_conversions.py +0 -240
- package/python/opentrons_shared_data/pipette/scripts/__init__.py +0 -0
- package/python/opentrons_shared_data/pipette/scripts/build_json_script.py +0 -469
- package/python/opentrons_shared_data/pipette/scripts/update_configuration_files.py +0 -450
- package/python/opentrons_shared_data/pipette/types.py +0 -193
- package/python/opentrons_shared_data/protocol/__init__.py +0 -13
- package/python/opentrons_shared_data/protocol/constants.py +0 -98
- package/python/opentrons_shared_data/protocol/dev_types.py +0 -436
- package/python/opentrons_shared_data/protocol/models/__init__.py +0 -48
- package/python/opentrons_shared_data/protocol/models/protocol_schema_v6.py +0 -145
- package/python/opentrons_shared_data/protocol/models/protocol_schema_v7.py +0 -95
- package/python/opentrons_shared_data/protocol/models/protocol_schema_v8.py +0 -110
- package/python/opentrons_shared_data/protocol/models/shared_models.py +0 -111
- package/python/opentrons_shared_data/py.typed +0 -0
- package/python/opentrons_shared_data/robot/__init__.py +0 -33
- package/python/opentrons_shared_data/robot/dev_types.py +0 -37
- package/python/pytest.ini +0 -2
- package/python/setup.cfg +0 -5
- package/python/setup.py +0 -179
- package/python/tests/__init__.py +0 -1
- package/python/tests/conftest.py +0 -0
- package/python/tests/deck/__init__.py +0 -0
- package/python/tests/deck/test_list_names.py +0 -12
- package/python/tests/deck/test_position.py +0 -113
- package/python/tests/deck/test_typechecks.py +0 -28
- package/python/tests/errors/__init__.py +0 -1
- package/python/tests/errors/test_error_completeness.py +0 -19
- package/python/tests/errors/test_exceptions.py +0 -74
- package/python/tests/gripper/__init__.py +0 -0
- package/python/tests/gripper/test_definition.py +0 -30
- package/python/tests/gripper/test_load.py +0 -16
- package/python/tests/labware/__init__.py +0 -13
- package/python/tests/labware/test_typechecks.py +0 -21
- package/python/tests/module/__init__.py +0 -20
- package/python/tests/module/test_load.py +0 -49
- package/python/tests/module/test_typechecks.py +0 -34
- package/python/tests/pipette/__init__.py +0 -0
- package/python/tests/pipette/test_load_data.py +0 -103
- package/python/tests/pipette/test_mutable_configurations.py +0 -266
- package/python/tests/pipette/test_pipette_definition.py +0 -183
- package/python/tests/pipette/test_pipette_load_name_conversions.py +0 -222
- package/python/tests/pipette/test_typechecks.py +0 -50
- package/python/tests/pipette/test_validate_schema.py +0 -37
- package/python/tests/protocol/__init__.py +0 -15
- package/python/tests/protocol/test_protocol_schema_v6.py +0 -107
- package/python/tests/protocol/test_protocol_schema_v7.py +0 -34
- package/python/tests/protocol/test_protocol_schema_v8.py +0 -20
- package/python/tests/protocol/test_typechecks.py +0 -36
- package/python/tests/robot/__init__.py +0 -0
- package/python/tests/robot/test_typechecks.py +0 -20
- /package/lib/{bundle.673284981fd97184260c.js.LICENSE.txt → opentrons-shared-data.js.LICENSE.txt} +0 -0
package/python/.coveragerc
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package/python/.flake8
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[flake8]
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# max cyclomatic complexity
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max-complexity = 9
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# do not require type annotations for self nor cls
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docstring-convention = google
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noqa-require-code = true
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# TODO(mc, 2021-04-12): this config ignores type annotation and doc
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# string lints in these modules; remove entries as they are fixed
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per-file-ignores =
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setup.py:ANN,D
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opentrons_shared_data/load.py:ANN,D
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tests/*:ANN,D
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config BR2_PACKAGE_PYTHON_OPENTRONS_SHARED_DATA
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bool "python-opentrons-shared-data"
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depends on BR2_PACKAGE_PYTHON3
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select BR2_PACKAGE_PYTHON_JSONSCHEMA # runtime
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select BR2_PACKAGE_PYTHON_TYPING_EXTENSIONS # runtime
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help
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Opentrons data sources. Used on an OT-2 robot.
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https://opentrons.com
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# shared-data/python makefile
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include ../../scripts/python.mk
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include ../../scripts/push.mk
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# Host key location for robot
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ssh_key ?= $(default_ssh_key)
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ssh_opts ?= $(default_ssh_opts)
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# documentation
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BUILD_NUMBER ?=
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ot_project := $(OPENTRONS_PROJECT)
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project_rs_default = $(if $(ot_project),$(ot_project),robot-stack)
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BUILD_DIR := dist
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wheel_file = $(BUILD_DIR)/$(call python_get_wheelname,shared-data,$(project_rs_default),opentrons_shared_data,$(BUILD_NUMBER),../../scripts/python_build_utils.py)
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sdist_file = $(BUILD_DIR)/$(call python_get_sdistname,shared-data,$(project_ot3_default),opentrons_shared_data,,../../scripts/python_build_utils.py)
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py_sources = $(filter %.py,$(shell $(SHX) find opentrons_shared_data)) opentrons_shared_data/py.typed
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deck_sources = $(wildcard ../deck/definitions/*/*.json) $(wildcard ../deck/schemas/*.json)
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module_sources = $(wildcard ../module/definitions/*.json) $(wildcard ../module/definitions/*/*.json) $(wildcard ../module/schemas/*.json)
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pipette_sources = $(wildcard ../pipette/definitions/*.json) $(wildcard ../pipette/schemas/*.json)
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json_sources = $(deck_sources) $(labware_sources) $(module_sources) $(pipette_sources) $(protocol_sources) $(gripper_sources)
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clean_cmd = $(SHX) rm -rf build $(BUILD_DIR) .coverage coverage.xml '*.egg-info' ' **/__pycache__' '**/*.pyc' 'opentrons_shared_data/**/.mypy_cache'
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$(python) -m pytest --cov=opentrons_shared_data --cov-report xml:coverage.xml $(tests) $(test_opts)
|
|
127
|
-
|
|
128
|
-
|
|
129
|
-
.PHONY: generate-schema
|
|
130
|
-
generate-schema:
|
|
131
|
-
$(python) -c "from opentrons_shared_data.$(target) import generate_schema; print(generate_schema())" > ../${target}/schemas/${version}.json
|
|
132
|
-
|
|
133
|
-
%-schema:
|
|
134
|
-
$(MAKE) generate-schema target=$*
|
package/python/Pipfile
DELETED
|
@@ -1,28 +0,0 @@
|
|
|
1
|
-
[[source]]
|
|
2
|
-
url = "https://pypi.python.org/simple"
|
|
3
|
-
verify_ssl = true
|
|
4
|
-
name = "pypi"
|
|
5
|
-
|
|
6
|
-
[dev-packages]
|
|
7
|
-
mypy = "==0.800"
|
|
8
|
-
flake8 = "~=3.9.0"
|
|
9
|
-
flake8-annotations = "~=2.6.2"
|
|
10
|
-
flake8-docstrings = "~=1.6.0"
|
|
11
|
-
flake8-noqa = "~=1.2.1"
|
|
12
|
-
twine = "==2.0.0"
|
|
13
|
-
wheel = "==0.30.0"
|
|
14
|
-
pytest = "==7.0.1"
|
|
15
|
-
pytest-cov = "==2.10.1"
|
|
16
|
-
pytest-xdist = "~=2.2.1 "
|
|
17
|
-
typeguard = "~=2.13"
|
|
18
|
-
# specify typing-extensions explicitly to force lockfile inclusion on Python >= 3.8
|
|
19
|
-
typing-extensions = ">=4.0.0,<5"
|
|
20
|
-
# pytest dependencies on windows, spec'd here to force lockfile inclusion
|
|
21
|
-
# https://github.com/pypa/pipenv/issues/4408#issuecomment-668324177
|
|
22
|
-
atomicwrites = { version = "==1.4.0", sys_platform = "== 'win32'" }
|
|
23
|
-
colorama = { version = "==0.4.4", sys_platform = "== 'win32'" }
|
|
24
|
-
black = "==22.3.0"
|
|
25
|
-
pytest-clarity = "~=1.0.0"
|
|
26
|
-
|
|
27
|
-
[packages]
|
|
28
|
-
opentrons-shared-data = { editable = true, path = "." }
|