@openneuro/app 4.2.4 → 4.3.0-alpha.1

package/src/scripts/datalad/routes/mobile-class.tsx

@@ -1,16 +0,0 @@
-import React, { FunctionComponent } from 'react'
-import { Media } from '../../styles/media'
-
-/**
- * This is janky but provided for backwards compatibility until new styling is ready
- */
-export const MobileClass: FunctionComponent = ({ children }) => (
-  <>
-    <Media at="small">
-      <div className="mobile-class">{children}</div>
-    </Media>
-    <Media greaterThanOrEqual="medium">
-      <div className="col-xs-6">{children}</div>
-    </Media>
-  </>
-)

package/src/scripts/datalad/routes/publish.jsx

@@ -1,50 +0,0 @@
-import React from 'react'
-import PropTypes from 'prop-types'
-import { Link, Redirect } from 'react-router-dom'
-import PublishDataset from '../mutations/publish.jsx'
-
-const hasExpectedMetadata = metadata =>
-  typeof metadata === 'object' && metadata !== null
-
-const Publish = ({ datasetId, metadata }) =>
-  hasExpectedMetadata(metadata) ? (
-    <div className="dataset-form">
-      <div className="col-xs-12 dataset-form-header">
-        <div className="form-group">
-          <label>Publish</label>
-        </div>
-        <hr />
-        <div className="col-xs-12 dataset-form-body">
-          <p className="text-danger">
-            All existing and future snapshots of this dataset will be released
-            publicly under a{' '}
-            <a href="https://wiki.creativecommons.org/wiki/CC0">CC0 license</a>.
-          </p>
-        </div>
-        <div className="col-xs-12 dataset-form-controls">
-          <div className="col-xs-12 modal-actions">
-            <Link to={`/datasets/${datasetId}`}>
-              <button className="btn-admin-blue">Return to Dataset</button>
-            </Link>
-            <PublishDataset datasetId={datasetId} />
-          </div>
-        </div>
-      </div>
-    </div>
-  ) : (
-    <Redirect
-      to={{
-        pathname: `/datasets/${datasetId}/metadata`,
-        state: {
-          submitPath: `/datasets/${datasetId}/publish`,
-        },
-      }}
-    />
-  )
-
-Publish.propTypes = {
-  datasetId: PropTypes.string,
-  metadata: PropTypes.object,
-}
-
-export default Publish

package/src/scripts/refactor_2021/dataset/dataset-query-fragments.js

@@ -1,220 +0,0 @@
-import { gql } from '@apollo/client'
-
-export const DRAFT_FRAGMENT = gql`
-  fragment DatasetDraft on Dataset {
-    id
-    draft {
-      id
-      modified
-      readme
-      head
-      description {
-        Name
-        Authors
-        DatasetDOI
-        License
-        Acknowledgements
-        HowToAcknowledge
-        Funding
-        ReferencesAndLinks
-        EthicsApprovals
-      }
-      summary {
-        modalities
-        secondaryModalities
-        sessions
-        subjects
-        subjectMetadata {
-          participantId
-          age
-          sex
-          group
-        }
-        tasks
-        size
-        totalFiles
-        dataProcessed
-        pet {
-          BodyPart
-          ScannerManufacturer
-          ScannerManufacturersModelName
-          TracerName
-          TracerRadionuclide
-        }
-      }
-    }
-  }
-`
-
-export const DRAFT_FILES_FRAGMENT = gql`
-  fragment DatasetDraftFiles on Dataset {
-    id
-    draft {
-      id
-      files {
-        id
-        key
-        filename
-        size
-        directory
-        annexed
-      }
-    }
-  }
-`
-
-export const PERMISSION_FRAGMENT = gql`
-  fragment DatasetPermissions on Dataset {
-    id
-    permissions {
-      id
-      userPermissions {
-        user {
-          id
-          email
-        }
-        level
-      }
-    }
-  }
-`
-
-export const DATASET_SNAPSHOTS = gql`
-  fragment DatasetSnapshots on Dataset {
-    id
-    snapshots {
-      id
-      tag
-      created
-      hexsha
-    }
-  }
-`
-
-export const ISSUE_FIELDS = `
-  severity
-  code
-  reason
-  files {
-    evidence
-    line
-    character
-    reason
-    file {
-      name
-      path
-      relativePath
-    }
-  }
-  additionalFileCount
-`
-
-export const DATASET_ISSUES = gql`
-  fragment DatasetIssues on Dataset {
-    id
-    draft {
-      id
-      issues { 
-        ${ISSUE_FIELDS}
-      }
-    }
-  }
-`
-
-export const SNAPSHOT_ISSUES = gql`
-  fragment SnapshotIssues on Snapshot {
-    id
-    issues {
-      ${ISSUE_FIELDS}
-    }
-  }
-`
-
-export const SNAPSHOT_FIELDS = gql`
-  fragment SnapshotFields on Snapshot {
-    id
-    tag
-    created
-    readme
-    description {
-      Name
-      Authors
-      DatasetDOI
-      License
-      Acknowledgements
-      HowToAcknowledge
-      Funding
-      ReferencesAndLinks
-      EthicsApprovals
-    }
-    files {
-      id
-      key
-      filename
-      size
-      directory
-      annexed
-    }
-    summary {
-      modalities
-      secondaryModalities
-      sessions
-      subjects
-      subjectMetadata {
-        participantId
-        age
-        sex
-        group
-      }
-      tasks
-      size
-      totalFiles
-      dataProcessed
-      pet {
-        BodyPart
-        ScannerManufacturer
-        ScannerManufacturersModelName
-        TracerName
-        TracerRadionuclide
-      }
-    }
-    analytics {
-      downloads
-      views
-    }
-    ...SnapshotIssues
-    hexsha
-  }
-  ${SNAPSHOT_ISSUES}
-`
-
-export const DATASET_METADATA = gql`
-  fragment DatasetMetadata on Dataset {
-    id
-    metadata {
-      datasetId
-      datasetUrl
-      datasetName
-      firstSnapshotCreatedAt
-      latestSnapshotCreatedAt
-      dxStatus
-      tasksCompleted
-      trialCount
-      grantFunderName
-      grantIdentifier
-      studyDesign
-      studyDomain
-      studyLongitudinal
-      dataProcessed
-      species
-      associatedPaperDOI
-      openneuroPaperDOI
-      seniorAuthor
-      adminUsers
-      ages
-      modalities
-      affirmedDefaced
-      affirmedConsent
-    }
-  }
-`

package/src/scripts/refactor_2021/dataset/queries/dataset-query-fragments.js

@@ -1,220 +0,0 @@
-import { gql } from '@apollo/client'
-
-export const DRAFT_FRAGMENT = gql`
-  fragment DatasetDraft on Dataset {
-    id
-    draft {
-      id
-      modified
-      readme
-      head
-      description {
-        Name
-        Authors
-        DatasetDOI
-        License
-        Acknowledgements
-        HowToAcknowledge
-        Funding
-        ReferencesAndLinks
-        EthicsApprovals
-      }
-      summary {
-        modalities
-        secondaryModalities
-        sessions
-        subjects
-        subjectMetadata {
-          participantId
-          age
-          sex
-          group
-        }
-        tasks
-        size
-        totalFiles
-        dataProcessed
-        pet {
-          BodyPart
-          ScannerManufacturer
-          ScannerManufacturersModelName
-          TracerName
-          TracerRadionuclide
-        }
-      }
-    }
-  }
-`
-
-export const DRAFT_FILES_FRAGMENT = gql`
-  fragment DatasetDraftFiles on Dataset {
-    id
-    draft {
-      id
-      files {
-        id
-        key
-        filename
-        size
-        directory
-        annexed
-      }
-    }
-  }
-`
-
-export const PERMISSION_FRAGMENT = gql`
-  fragment DatasetPermissions on Dataset {
-    id
-    permissions {
-      id
-      userPermissions {
-        user {
-          id
-          email
-        }
-        level
-      }
-    }
-  }
-`
-
-export const DATASET_SNAPSHOTS = gql`
-  fragment DatasetSnapshots on Dataset {
-    id
-    snapshots {
-      id
-      tag
-      created
-      hexsha
-    }
-  }
-`
-
-export const ISSUE_FIELDS = `
-  severity
-  code
-  reason
-  files {
-    evidence
-    line
-    character
-    reason
-    file {
-      name
-      path
-      relativePath
-    }
-  }
-  additionalFileCount
-`
-
-export const DATASET_ISSUES = gql`
-  fragment DatasetIssues on Dataset {
-    id
-    draft {
-      id
-      issues { 
-        ${ISSUE_FIELDS}
-      }
-    }
-  }
-`
-
-export const SNAPSHOT_ISSUES = gql`
-  fragment SnapshotIssues on Snapshot {
-    id
-    issues {
-      ${ISSUE_FIELDS}
-    }
-  }
-`
-
-export const SNAPSHOT_FIELDS = gql`
-  fragment SnapshotFields on Snapshot {
-    id
-    tag
-    created
-    readme
-    description {
-      Name
-      Authors
-      DatasetDOI
-      License
-      Acknowledgements
-      HowToAcknowledge
-      Funding
-      ReferencesAndLinks
-      EthicsApprovals
-    }
-    files {
-      id
-      key
-      filename
-      size
-      directory
-      annexed
-    }
-    summary {
-      modalities
-      secondaryModalities
-      sessions
-      subjects
-      subjectMetadata {
-        participantId
-        age
-        sex
-        group
-      }
-      tasks
-      size
-      totalFiles
-      dataProcessed
-      pet {
-        BodyPart
-        ScannerManufacturer
-        ScannerManufacturersModelName
-        TracerName
-        TracerRadionuclide
-      }
-    }
-    analytics {
-      downloads
-      views
-    }
-    ...SnapshotIssues
-    hexsha
-  }
-  ${SNAPSHOT_ISSUES}
-`
-
-export const DATASET_METADATA = gql`
-  fragment DatasetMetadata on Dataset {
-    id
-    metadata {
-      datasetId
-      datasetUrl
-      datasetName
-      firstSnapshotCreatedAt
-      latestSnapshotCreatedAt
-      dxStatus
-      tasksCompleted
-      trialCount
-      grantFunderName
-      grantIdentifier
-      studyDesign
-      studyDomain
-      studyLongitudinal
-      dataProcessed
-      species
-      associatedPaperDOI
-      openneuroPaperDOI
-      seniorAuthor
-      adminUsers
-      ages
-      modalities
-      affirmedDefaced
-      affirmedConsent
-    }
-  }
-`