npm - @openhealth/oht-custom-parser-lib - Versions diffs - 0.5.55 → 0.5.57 - Mend

@openhealth/oht-custom-parser-lib 0.5.55 → 0.5.57

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Files changed (31) hide show

package/dist/index.d.ts +3 -2
package/dist/index.js +9 -2
package/dist/index.js.map +1 -1
package/dist/service/auxiliaryFunctions.service.d.ts +1 -8
package/dist/service/auxiliaryFunctions.service.js +40 -11
package/dist/service/auxiliaryFunctions.service.js.map +1 -1
package/dist/service/ohtAgnosticMeasurementsExtractor.service.d.ts +59 -0
package/dist/service/ohtAgnosticMeasurementsExtractor.service.js +603 -0
package/dist/service/ohtAgnosticMeasurementsExtractor.service.js.map +1 -0
package/dist/service/ohtReportMeasurementsExtractor.service.d.ts +2 -4
package/dist/service/ohtReportMeasurementsExtractor.service.js +52 -64
package/dist/service/ohtReportMeasurementsExtractor.service.js.map +1 -1
package/dist/service/parsingErrorService.service.d.ts +40 -0
package/dist/service/parsingErrorService.service.js +251 -0
package/dist/service/parsingErrorService.service.js.map +1 -0
package/dist/service/processingLogger.service.d.ts +5 -0
package/dist/service/processingLogger.service.js +52 -1
package/dist/service/processingLogger.service.js.map +1 -1
package/dist/types/error.types.d.ts +104 -0
package/dist/types/error.types.js +240 -1
package/dist/types/error.types.js.map +1 -1
package/dist/util-ts/dataUtils.d.ts +1 -0
package/dist/util-ts/dataUtils.js +15 -1
package/dist/util-ts/dataUtils.js.map +1 -1
package/dist/util-ts/mapperUtils.d.ts +2 -1
package/dist/util-ts/mapperUtils.js +12 -3
package/dist/util-ts/mapperUtils.js.map +1 -1
package/package.json +1 -1
package/dist/util-ts/loincMapping.d.ts +0 -5
package/dist/util-ts/loincMapping.js +0 -81
package/dist/util-ts/loincMapping.js.map +0 -1

package/dist/service/ohtReportMeasurementsExtractor.service.d.ts CHANGED Viewed

@@ -1,6 +1,5 @@
 import { UnknownUnits } from "../types/custom-parser.types";
 import { Measurement, PatientInfo, UnknownMeasurement, Exam, UnmappedLabKey, PartnerCustomization } from "../types/oht.types";
-import { ErrorMessage } from "../types/error.types";
 /**
  * Extracts measurements from OHT report exams by processing each exam through biomarker mapping,
  * transformation rules, and value extraction.
@@ -121,7 +120,7 @@ import { ErrorMessage } from "../types/error.types";
  *   - `isReportCorrectlyParsed`: Boolean indicating if all measurements were parsed correctly
  *
  * ## Error Handling:
- * - All errors are added to the `errorMessages` array passed as parameter
+ * - All errors are recorded via `parsingErrorService.record()`
  * - Errors are categorized by destination (slack, notes, bi)
  * - Processing continues even if individual exams fail
  * - Errors are logged with context (filename, labKey, ohtBmId, etc.)
@@ -141,12 +140,11 @@ import { ErrorMessage } from "../types/error.types";
  * @param allowMultiMeasurementsPerBiomarker - Whether to allow multiple measurements per biomarker ID
  * @param ohtCoreApiKey - API key for OHT Core API calls
  * @param partnerId - Partner ID for fetching biomarker mappings and synonym units
- * @param errorMessages - Array to accumulate error messages (modified in-place)
  * @param isReportPreview - isReportPreview Report Simulator
  * @param partnerCustomization - `panelCustomisation` and `reportCustomisation` coming from `partnerConfig`.
  * @returns Promise resolving to extraction result with measurements, unknownMeasurements, unknownUnits, unmappedLabKeys, and parsing status
  */
-declare function ohtReportMeasurementsExtractor(isReportPreview: boolean, exams: Exam[], sourceFilename: string, patientInfo: PatientInfo, documentDate: Date | undefined, allowMultiMeasurementsPerBiomarker: boolean, ohtCoreApiKey: string, partnerId: string, errorMessages: ErrorMessage[], partnerCustomization?: PartnerCustomization): Promise<{
+declare function ohtReportMeasurementsExtractor(isReportPreview: boolean, exams: Exam[], sourceFilename: string, patientInfo: PatientInfo, documentDate: Date | undefined, allowMultiMeasurementsPerBiomarker: boolean, ohtCoreApiKey: string, partnerId: string, partnerCustomization?: PartnerCustomization): Promise<{
     measurements: Measurement[];
     unknownMeasurements: UnknownMeasurement[];
     unknownUnits: UnknownUnits[];

package/dist/service/ohtReportMeasurementsExtractor.service.js CHANGED Viewed

@@ -43,6 +43,8 @@ const extractionUtils_1 = require("../util-ts/extractionUtils");
 const processingLogger_service_1 = require("./processingLogger.service");
 const apiUtils_1 = require("../util-ts/apiUtils");
 const oht_types_1 = require("../types/oht.types");
+const error_types_1 = require("../types/error.types");
+const parsingErrorService_service_1 = require("./parsingErrorService.service");
 const path = __importStar(require("path"));
 const fs = __importStar(require("fs"));
 // Import version from package.json file
@@ -84,6 +86,10 @@ const OHT_CORE_URL = process.env.OHT_CORE_URL;
  * Current filename being processed (global state for error reporting)
  */
 let filename = '';
+function resolveUnknownMeasurementName(parts, fallback) {
+    const name = parts.filter((part) => part?.trim()).join(':');
+    return name || fallback;
+}
 /**
  * Extracts measurements from OHT report exams by processing each exam through biomarker mapping,
  * transformation rules, and value extraction.
@@ -204,7 +210,7 @@ let filename = '';
  *   - `isReportCorrectlyParsed`: Boolean indicating if all measurements were parsed correctly
  *
  * ## Error Handling:
- * - All errors are added to the `errorMessages` array passed as parameter
+ * - All errors are recorded via `parsingErrorService.record()`
  * - Errors are categorized by destination (slack, notes, bi)
  * - Processing continues even if individual exams fail
  * - Errors are logged with context (filename, labKey, ohtBmId, etc.)
@@ -224,12 +230,11 @@ let filename = '';
  * @param allowMultiMeasurementsPerBiomarker - Whether to allow multiple measurements per biomarker ID
  * @param ohtCoreApiKey - API key for OHT Core API calls
  * @param partnerId - Partner ID for fetching biomarker mappings and synonym units
- * @param errorMessages - Array to accumulate error messages (modified in-place)
  * @param isReportPreview - isReportPreview Report Simulator
  * @param partnerCustomization - `panelCustomisation` and `reportCustomisation` coming from `partnerConfig`.
  * @returns Promise resolving to extraction result with measurements, unknownMeasurements, unknownUnits, unmappedLabKeys, and parsing status
  */
-async function ohtReportMeasurementsExtractor(isReportPreview, exams, sourceFilename, patientInfo, documentDate, allowMultiMeasurementsPerBiomarker, ohtCoreApiKey, partnerId, errorMessages, partnerCustomization) {
+async function ohtReportMeasurementsExtractor(isReportPreview, exams, sourceFilename, patientInfo, documentDate, allowMultiMeasurementsPerBiomarker, ohtCoreApiKey, partnerId, partnerCustomization) {
     filename = sourceFilename;
     const measurements = [];
     const unknownMeasurements = [];
@@ -241,9 +246,8 @@ async function ohtReportMeasurementsExtractor(isReportPreview, exams, sourceFile
     if (labKeys.length === 0) {
         const errorMsg = `No lab keys found, filename: ${(0, processingLogger_service_1.getRequestScopedFilename)(filename)}`;
         processingLogger_service_1.processingLogger.logError(errorMsg);
-        errorMessages.push({
-            destination: { slack: true, notes: false, bi: false },
-            message: errorMsg,
+        parsingErrorService_service_1.parsingErrorService.record(error_types_1.ParsingErrorType.NO_LAB_KEYS, {
+            messageSuffix: (0, processingLogger_service_1.getRequestScopedFilename)(filename),
         });
         return {
             measurements,
@@ -390,16 +394,10 @@ async function ohtReportMeasurementsExtractor(isReportPreview, exams, sourceFile
             let isMeasurementCorrectlyParsed = true;
             // if BM is already in measurements and multiple measurements are not allowed, continue to the next one
             if (!allowMultiMeasurementsPerBiomarker && measurements.some(measurement => measurement.biomarkerId === finalOhtBmId)) {
-                processingLogger_service_1.processingLogger.addWarning(`Biomarker already in measurements array, should investigate, filename: ${(0, processingLogger_service_1.getRequestScopedFilename)(filename)}`, 'extract_measurements', {
-                    warningType: 'duplicate_biomarker_measurement',
-                    warningCategory: 'measurements',
-                    warningSeverity: 'degraded',
-                    data: { ohtBmId: finalOhtBmId, labKey },
-                });
-                errorMessages.push({
-                    destination: { slack: false, notes: false, bi: true },
-                    message: `Biomarkers Duplicated keys:[PLACEHOLDER]`,
-                    item: `bmId:${finalOhtBmId}, labKey:${transformedExamObj.labKey}`
+                parsingErrorService_service_1.parsingErrorService.record(error_types_1.ParsingErrorType.DUPLICATE_BIOMARKER, {
+                    labKey: transformedExamObj.labKey,
+                    biomarkerId: finalOhtBmId,
+                    item: `bmId:${finalOhtBmId}, labKey:${transformedExamObj.labKey}`,
                 });
                 continue;
             }
@@ -409,16 +407,11 @@ async function ohtReportMeasurementsExtractor(isReportPreview, exams, sourceFile
                 `name:${ohtBiomarker.acf.shortName}, bmId:${finalOhtBmId}, labKey:${transformedExamObj.labKey}` :
                 `bmId:${finalOhtBmId}, labKey:${transformedExamObj.labKey}`;
             if (!ohtBiomarker) {
-                processingLogger_service_1.processingLogger.addWarning(`Biomarker not found in API response for ohtBmId: ${finalOhtBmId}, labKey: ${transformedExamObj.labKey}, filename: ${(0, processingLogger_service_1.getRequestScopedFilename)(filename)}`, 'extract_measurements', {
-                    warningType: 'biomarker_not_found',
-                    warningCategory: 'mapping',
-                    warningSeverity: 'critical',
-                    data: { ohtBmId: finalOhtBmId, labKey },
-                });
-                errorMessages.push({
-                    destination: { slack: true, notes: true, bi: true },
-                    message: `Biomarker not found for:[PLACEHOLDER]`,
-                    item: `${bmInfo}`
+                parsingErrorService_service_1.parsingErrorService.record(error_types_1.ParsingErrorType.BIOMARKER_NOT_FOUND, {
+                    labKey: transformedExamObj.labKey,
+                    biomarkerId: finalOhtBmId,
+                    item: `${bmInfo}`,
+                    errorTrace: { ohtBmId: finalOhtBmId, labKey: transformedExamObj.labKey },
                 });
                 continue;
             }
@@ -440,24 +433,26 @@ async function ohtReportMeasurementsExtractor(isReportPreview, exams, sourceFile
                 });
             }
             if (!isUnitParsedCorrectly) {
-                processingLogger_service_1.processingLogger.addWarning(`Unit not extracted correctly for "${finalOhtBmId}|${transformedExamObj.labKey}", filename: ${(0, processingLogger_service_1.getRequestScopedFilename)(filename)}`, 'extract_measurements', {
-                    warningType: 'unit_extraction_failed',
-                    warningCategory: 'measurements',
-                    warningSeverity: 'degraded',
-                    data: { ohtBmId: finalOhtBmId, labKey },
-                });
-                errorMessages.push({
-                    destination: { slack: true, notes: true, bi: true },
-                    message: `Unit not extracted correctly for:[PLACEHOLDER]`,
-                    item: `${bmInfo}, unit:${unit}`
+                parsingErrorService_service_1.parsingErrorService.record(error_types_1.ParsingErrorType.UNIT_NOT_EXTRACTED, {
+                    labKey: transformedExamObj.labKey,
+                    biomarkerId: finalOhtBmId,
+                    item: `${bmInfo}, unit:${unknownUnit}`,
+                    errorTrace: { unknownUnit },
                 });
                 isMeasurementCorrectlyParsed = false;
             }
             let { valueType, alphanumericalValue, numberValue, valueComparator, isValueParsedCorrectly } = (0, extractionUtils_1.ohtReportParseExamValue)(transformedExamObj, ohtBiomarker);
             if ((0, dataUtils_1.isNumericalWithoutValidResult)(valueType, numberValue, alphanumericalValue)) {
                 const alphanumericalValueTrimmed = alphanumericalValue?.trim() ?? '';
+                parsingErrorService_service_1.parsingErrorService.record(error_types_1.ParsingErrorType.NUMERIC_BIOMARKER_ALPHANUMERIC_VALUE, {
+                    labKey: transformedExamObj.labKey,
+                    biomarkerId: finalOhtBmId,
+                    item: `${bmInfo}, value:${alphanumericalValueTrimmed}`,
+                    ohtExam: transformedExamObj,
+                    originalExam: originalExam ?? undefined,
+                });
                 const unknownMeasurement = {
-                    biomarkerName: transformedExamObj.description ?? '',
+                    biomarkerName: resolveUnknownMeasurementName([transformedExamObj.description], transformedExamObj.labKey || labKey || '(unmapped measurement)'),
                     value: alphanumericalValueTrimmed,
                     unit: unit ?? '',
                     annotation: transformedExamObj.annotation ?? '',
@@ -477,17 +472,14 @@ async function ohtReportMeasurementsExtractor(isReportPreview, exams, sourceFile
                 unknownMeasurements.push(unknownMeasurement);
                 continue;
             }
-            if (!isValueParsedCorrectly) {
-                processingLogger_service_1.processingLogger.addWarning(`Value not extracted correctly for "${finalOhtBmId}|${transformedExamObj.labKey}", filename: ${(0, processingLogger_service_1.getRequestScopedFilename)(filename)}`, 'extract_measurements', {
-                    warningType: 'value_extraction_failed',
-                    warningCategory: 'measurements',
-                    warningSeverity: 'degraded',
-                    data: { ohtBmId: finalOhtBmId, labKey },
-                });
-                errorMessages.push({
-                    destination: { slack: true, notes: true, bi: true },
-                    message: `Value not extracted correctly for:[PLACEHOLDER]`,
-                    item: `${bmInfo}, value:${numberValue}${unit}`
+            // GROUPED_ biomarkers derive their display value from appended annotation (rangeAnnotation),
+            // not from syntheticValue — an empty syntheticValue is expected and must not trigger this error.
+            if (!isValueParsedCorrectly && !labKey.startsWith('GROUPED_')) {
+                parsingErrorService_service_1.parsingErrorService.record(error_types_1.ParsingErrorType.VALUE_NOT_EXTRACTED, {
+                    labKey: transformedExamObj.labKey,
+                    biomarkerId: finalOhtBmId,
+                    item: `${bmInfo}, value:${alphanumericalValue ?? numberValue}${unit !== 'None' ? unit : ''}`,
+                    errorTrace: { numberValue, alphanumericalValue, unit },
                 });
                 isMeasurementCorrectlyParsed = false;
             }
@@ -495,10 +487,12 @@ async function ohtReportMeasurementsExtractor(isReportPreview, exams, sourceFile
             if (isValueParsedCorrectly && valueType === 'NUMERICAL') {
                 const isPlausibleValue = numberValue !== null && (0, extractionUtils_1.ohtReportCheckValueForPlausibleValues)(finalOhtBmId, transformedExamObj.labKey, ohtBiomarker, unit, numberValue, isUnitParsedCorrectly, filename);
                 if (!isPlausibleValue) {
-                    errorMessages.push({
-                        destination: { slack: false, notes: true, bi: true },
-                        message: `Value is not plausible for:[PLACEHOLDER]`,
-                        item: `${bmInfo}, value:${numberValue}${unit}`
+                    parsingErrorService_service_1.parsingErrorService.record(error_types_1.ParsingErrorType.VALUE_NOT_PLAUSIBLE, {
+                        labKey: transformedExamObj.labKey,
+                        biomarkerId: finalOhtBmId,
+                        item: `${bmInfo}, value:${numberValue}${unit}`,
+                        ohtExam: transformedExamObj,
+                        originalExam: originalExam ?? undefined,
                     });
                     // Resolve name with fallbacks
                     const implausibleName = transformedExamObj.examName ||
@@ -547,16 +541,10 @@ async function ohtReportMeasurementsExtractor(isReportPreview, exams, sourceFile
                 to = extractedRange.to ?? null;
                 isRangeParsedCorrectly = extractedRange.isRangeParsedCorrectly;
                 if (!isRangeParsedCorrectly) {
-                    processingLogger_service_1.processingLogger.addWarning(`Range not extracted correctly for "${finalOhtBmId}|${transformedExamObj.labKey}", filename: ${(0, processingLogger_service_1.getRequestScopedFilename)(filename)}`, 'extract_measurements', {
-                        warningType: 'range_extraction_failed',
-                        warningCategory: 'measurements',
-                        warningSeverity: 'degraded',
-                        data: { ohtBmId: finalOhtBmId, labKey },
-                    });
-                    errorMessages.push({
-                        destination: { slack: true, notes: true, bi: true },
-                        message: `Range not extracted correctly for:[PLACEHOLDER]`,
-                        item: `${bmInfo}`
+                    parsingErrorService_service_1.parsingErrorService.record(error_types_1.ParsingErrorType.RANGE_NOT_EXTRACTED, {
+                        labKey: transformedExamObj.labKey,
+                        biomarkerId: finalOhtBmId,
+                        item: `${bmInfo}`,
                     });
                     isMeasurementCorrectlyParsed = false;
                 }
@@ -621,7 +609,7 @@ async function ohtReportMeasurementsExtractor(isReportPreview, exams, sourceFile
                 continue;
             }
             // No mapping or ohtBmId === -1: create unknownMeasurement
-            const unknownMeasurementName = `${transformedExamObj.mnemonic}:${transformedExamObj.examName}`;
+            const unknownMeasurementName = resolveUnknownMeasurementName([transformedExamObj.mnemonic, transformedExamObj.examName], labKey || '(unmapped measurement)');
             const originalName = labKey.split(':')[1] || transformedExamObj.examName;
             const annotation = `${transformedExamObj.annotation || ''}`;
             const dataOrigin = {
@@ -657,7 +645,7 @@ async function ohtReportMeasurementsExtractor(isReportPreview, exams, sourceFile
         backend_mapped_biomarkers: backendMappedCount,
         unmapped_biomarkers: unmappedCount,
         total_processed: exams.length,
-        errors: errorMessages.length,
+        errors: parsingErrorService_service_1.parsingErrorService.getLocalErrors().length,
     });
     return {
         measurements,

package/dist/service/ohtReportMeasurementsExtractor.service.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/service/parsingErrorService.service.d.ts ADDED Viewed

@@ -0,0 +1,40 @@
+/**
+ * Request-scoped parsing error collector for agnostic-parser.
+ *
+ * Layer 1 (local): in-memory errors → ingestion notes, Slack, processingLogger.
+ * Layer 2 (Core): grouped profiles flushed at end of run via runWithContextAsync finally.
+ *
+ * Call sites use record() only — do not duplicate processingLogger.addWarning/addError.
+ */
+import { LocalParsingError, ErrorProfilePayload, ParsingErrorType, RecordParsingErrorDetails, RecordParsingErrorOptions } from '../types/error.types';
+import { ProcessingContext } from './processingLogger.service';
+declare class ParsingErrorService {
+    /** Called from runWithContextAsync — do not use directly in parsers. */
+    initRequestState(requestId: string): void;
+    clearRequestState(requestId: string): void;
+    /**
+     * Single entry point for parsing issues.
+     * Resolves message/clientMessage from catalog + details, stores Layer 1, syncs logger once.
+     */
+    record(errorType: ParsingErrorType, details?: RecordParsingErrorDetails, options?: RecordParsingErrorOptions): LocalParsingError;
+    getLocalErrors(): LocalParsingError[];
+    getAggregatedNotes(): string;
+    getAggregatedSlack(): string;
+    sendSlackIfNeeded(ohapiUrl: string, partnerName: string, fileUploadId: string): Promise<void>;
+    /**
+     * Groups local errors by (errorType, contextKey).
+     * Technical message → occurrence snapshot; clientMessage → profile message.
+     */
+    buildCorePayloads(ctx: ProcessingContext): ErrorProfilePayload[];
+    /**
+     * POST grouped profiles to Core. Called from runWithContextAsync finally.
+     * No-op when empty, preview, or missing partner/api key. Never throws.
+     */
+    flushToCoreSafe(): Promise<void>;
+    clear(): void;
+}
+export declare const parsingErrorService: ParsingErrorService;
+/** Lifecycle hooks used by processingLogger.runWithContextAsync. */
+export declare function initParsingErrorRequestState(context: ProcessingContext): string;
+export declare function clearParsingErrorRequestState(requestId: string): void;
+export {};

package/dist/service/parsingErrorService.service.js ADDED Viewed

@@ -0,0 +1,251 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.parsingErrorService = void 0;
+exports.initParsingErrorRequestState = initParsingErrorRequestState;
+exports.clearParsingErrorRequestState = clearParsingErrorRequestState;
+/**
+ * Request-scoped parsing error collector for agnostic-parser.
+ *
+ * Layer 1 (local): in-memory errors → ingestion notes, Slack, processingLogger.
+ * Layer 2 (Core): grouped profiles flushed at end of run via runWithContextAsync finally.
+ *
+ * Call sites use record() only — do not duplicate processingLogger.addWarning/addError.
+ */
+const error_types_1 = require("../types/error.types");
+const dataUtils_1 = require("../util-ts/dataUtils");
+const processingLogger_service_1 = require("./processingLogger.service");
+const errorHandling_service_1 = require("./errorHandling.service");
+const slackMessages_service_1 = require("./slackMessages.service");
+// One state bag per request — keyed by the same id as processingLogger (ALS).
+const parsingErrorStateRegistry = new Map();
+function createEmptyParsingErrorState() {
+    return { localErrors: [] };
+}
+const SEVERITY_RANK = {
+    warning: 1,
+    error: 2,
+    critical: 3,
+};
+function maxParsingErrorSeverity(a, b) {
+    return SEVERITY_RANK[a] >= SEVERITY_RANK[b] ? a : b;
+}
+function getMutableState() {
+    const requestId = (0, processingLogger_service_1.getCurrentRequestId)();
+    if (requestId == null) {
+        return createEmptyParsingErrorState();
+    }
+    const state = parsingErrorStateRegistry.get(requestId);
+    if (state === undefined) {
+        return createEmptyParsingErrorState();
+    }
+    return state;
+}
+/** Maps a LocalParsingError to a single processingLogger call (severity → warning/error). */
+function syncToProcessingLogger(localError) {
+    const catalog = error_types_1.PARSING_ERROR_CATALOG[localError.errorType];
+    if (localError.severity === 'critical') {
+        const rejectReason = localError.rejectReason ?? catalog.rejectReason;
+        processingLogger_service_1.processingLogger.addError(new Error(localError.message), localError.pipelineStep, {
+            rejectReason,
+            errorCode: localError.errorType,
+        });
+        return;
+    }
+    const warningSeverity = localError.severity === 'error' ? 'degraded' : 'info';
+    processingLogger_service_1.processingLogger.addWarning(localError.message, localError.pipelineStep, {
+        warningType: catalog.warningType ?? 'parsing_error',
+        warningCategory: catalog.warningCategory ?? 'general',
+        warningSeverity,
+        data: localError.errorTrace,
+        warningCode: localError.errorType,
+    });
+}
+/** Adapts Layer 1 errors to legacy aggregateMessages() shape for notes/Slack. */
+function localErrorsToErrorMessages(localErrors, channel) {
+    return localErrors
+        .filter((error) => error.destinations[channel])
+        .map((error) => ({
+        destination: error.destinations,
+        message: error.message,
+        item: error.item,
+    }));
+}
+class ParsingErrorService {
+    /** Called from runWithContextAsync — do not use directly in parsers. */
+    initRequestState(requestId) {
+        parsingErrorStateRegistry.set(requestId, createEmptyParsingErrorState());
+    }
+    clearRequestState(requestId) {
+        parsingErrorStateRegistry.delete(requestId);
+    }
+    /**
+     * Single entry point for parsing issues.
+     * Resolves message/clientMessage from catalog + details, stores Layer 1, syncs logger once.
+     */
+    record(errorType, details, options) {
+        const catalog = error_types_1.PARSING_ERROR_CATALOG[errorType];
+        const severity = details?.severity ?? catalog.severity;
+        const pipelineStep = details?.pipelineStep ?? catalog.pipelineStep;
+        const contextKey = (0, error_types_1.resolveParsingErrorContextKey)(catalog.contextKey, details);
+        const message = (0, error_types_1.buildParsingErrorMessage)(catalog.message, details);
+        const rejectReason = details?.rejectReason ?? catalog.rejectReason;
+        const destinations = {
+            slack: options?.notifySlack ?? details?.destinations?.slack ?? catalog.destinations.slack,
+            notes: options?.notifyNotes ?? details?.destinations?.notes ?? catalog.destinations.notes,
+            bi: options?.notifyBi ?? details?.destinations?.bi ?? catalog.destinations.bi,
+        };
+        const localError = {
+            errorType,
+            severity,
+            message,
+            clientMessage: catalog.clientMessage,
+            pipelineStep,
+            contextKey,
+            item: details?.item,
+            destinations,
+            rejectReason,
+            biomarkerId: details?.biomarkerId,
+            biomarkerName: details?.biomarkerName,
+            errorTrace: details?.errorTrace,
+            ohtExam: details?.ohtExam,
+            originalExam: details?.originalExam,
+            timestamp: new Date(),
+        };
+        getMutableState().localErrors.push(localError);
+        syncToProcessingLogger(localError);
+        return localError;
+    }
+    getLocalErrors() {
+        return [...getMutableState().localErrors];
+    }
+    // --- Layer 1 outputs (not persisted to Core) ---
+    getAggregatedNotes() {
+        return (0, errorHandling_service_1.aggregateMessages)(localErrorsToErrorMessages(getMutableState().localErrors, 'notes'), 'notes');
+    }
+    getAggregatedSlack() {
+        return (0, errorHandling_service_1.aggregateMessages)(localErrorsToErrorMessages(getMutableState().localErrors, 'slack'), 'slack');
+    }
+    async sendSlackIfNeeded(ohapiUrl, partnerName, fileUploadId) {
+        const slackText = this.getAggregatedSlack();
+        if (!slackText.trim()) {
+            return;
+        }
+        const fileUrl = `${ohapiUrl}/data-import/file-uploads/${fileUploadId}`;
+        const slackMsg = (0, slackMessages_service_1.getSlackFileIssueNotificationMessage)(slackText, `AgnosticParser [${partnerName}]`, fileUrl);
+        if (slackMsg.blocks[3].text.text.trim() !== '') {
+            await (0, slackMessages_service_1.sendMessageToSlack)(slackMsg);
+        }
+    }
+    // --- Layer 2: bulk payload for oht-core PartnerErrorProfiles ---
+    /**
+     * Groups local errors by (errorType, contextKey).
+     * Technical message → occurrence snapshot; clientMessage → profile message.
+     */
+    buildCorePayloads(ctx) {
+        const localErrors = getMutableState().localErrors;
+        if (localErrors.length === 0) {
+            return [];
+        }
+        const groups = new Map();
+        for (const error of localErrors) {
+            const key = `${error.errorType}::${error.contextKey}`;
+            const group = groups.get(key);
+            if (group) {
+                group.push(error);
+            }
+            else {
+                groups.set(key, [error]);
+            }
+        }
+        const fileUploadId = ctx.fileUploadId ?? '000000000000000000000001';
+        const payloads = [];
+        for (const group of groups.values()) {
+            const representative = group[group.length - 1];
+            const severity = group.reduce((max, error) => maxParsingErrorSeverity(max, error.severity), group[0].severity);
+            const snapshots = group.map((error) => ({
+                dataImportFileUploadId: fileUploadId,
+                message: error.message,
+                pipelineStep: error.pipelineStep,
+                severity: error.severity,
+                rejectReason: error.rejectReason ?? null,
+                errorTrace: error.errorTrace,
+                occurredAt: error.timestamp.toISOString(),
+            }));
+            const payload = {
+                contextKey: representative.contextKey,
+                issueType: representative.errorType,
+                severity,
+                message: representative.clientMessage,
+                pipelineStep: representative.pipelineStep,
+                rejectReason: representative.rejectReason ?? null,
+                biomarkerId: representative.biomarkerId,
+                biomarkerName: representative.biomarkerName,
+                errorTrace: representative.errorTrace,
+                ohtExam: representative.ohtExam,
+                originalExam: representative.originalExam,
+                source: 'AgnosticParser',
+                uploadedByUserId: ctx.uploadedByUserId,
+            };
+            if (group.length === 1) {
+                payload.occurrence = snapshots[0];
+            }
+            else {
+                payload.occurrences = snapshots;
+                payload.occurrencesCount = group.length;
+            }
+            payloads.push(payload);
+        }
+        return payloads;
+    }
+    /**
+     * POST grouped profiles to Core. Called from runWithContextAsync finally.
+     * No-op when empty, preview, or missing partner/api key. Never throws.
+     */
+    async flushToCoreSafe() {
+        const state = getMutableState();
+        if (state.localErrors.length === 0) {
+            return;
+        }
+        const loggerState = processingLogger_service_1.processingLogger.getState();
+        const partnerId = loggerState.partnerId;
+        const isPreview = loggerState.isPreview ?? false;
+        if (!partnerId || isPreview) {
+            return;
+        }
+        const apiKey = process.env.OHT_CORE_AGNOSTIC_PARSER_API_KEY;
+        if (!apiKey) {
+            processingLogger_service_1.processingLogger.logError('Missing OHT_CORE_AGNOSTIC_PARSER_API_KEY; skipping parsing error profile flush', undefined, { partner_id: partnerId });
+            return;
+        }
+        const ctx = {
+            fileUploadId: loggerState.fileUploadId,
+            partnerId,
+            uploadedByUserId: loggerState.uploadedByUserId,
+            isPreview,
+        };
+        try {
+            const payloads = this.buildCorePayloads(ctx);
+            if (payloads.length === 0) {
+                return;
+            }
+            await (0, dataUtils_1.bulkUpsertCustomParserErrorProfiles)(partnerId, payloads, apiKey);
+        }
+        catch (error) {
+            processingLogger_service_1.processingLogger.logError('Failed to flush parsing error profiles to Core', error instanceof Error ? error : undefined, { partner_id: partnerId });
+        }
+    }
+    clear() {
+        getMutableState().localErrors.length = 0;
+    }
+}
+exports.parsingErrorService = new ParsingErrorService();
+/** Lifecycle hooks used by processingLogger.runWithContextAsync. */
+function initParsingErrorRequestState(context) {
+    const requestId = (0, processingLogger_service_1.getRequestIdFromContext)(context);
+    exports.parsingErrorService.initRequestState(requestId);
+    return requestId;
+}
+function clearParsingErrorRequestState(requestId) {
+    exports.parsingErrorService.clearRequestState(requestId);
+}
+//# sourceMappingURL=parsingErrorService.service.js.map

package/dist/service/parsingErrorService.service.js.map ADDED Viewed

@@ -0,0 +1 @@

+ 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