@nfdi4plants/arctrl 3.0.1 → 3.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/ts/node_modules/@fable-org/fable-library-js/System.Collections.Generic.js +320 -0
- package/dist/ts/ts/ARC.d.ts +3 -3
- package/dist/ts/ts/ARC.d.ts.map +1 -1
- package/dist/ts/ts/ARC.js +72 -93
- package/dist/ts/ts/CWL/Decode.d.ts +13 -10
- package/dist/ts/ts/CWL/Decode.d.ts.map +1 -1
- package/dist/ts/ts/CWL/Decode.js +91 -46
- package/dist/ts/ts/CWL/Encode.d.ts +1 -1
- package/dist/ts/ts/CWL/Encode.d.ts.map +1 -1
- package/dist/ts/ts/CWL/Encode.js +69 -51
- package/dist/ts/ts/CWL/ExpressionToolDescription.d.ts +6 -3
- package/dist/ts/ts/CWL/ExpressionToolDescription.d.ts.map +1 -1
- package/dist/ts/ts/CWL/ExpressionToolDescription.js +13 -4
- package/dist/ts/ts/CWL/OperationDescription.d.ts +6 -3
- package/dist/ts/ts/CWL/OperationDescription.d.ts.map +1 -1
- package/dist/ts/ts/CWL/OperationDescription.js +13 -4
- package/dist/ts/ts/CWL/Requirements.d.ts +6 -5
- package/dist/ts/ts/CWL/Requirements.d.ts.map +1 -1
- package/dist/ts/ts/CWL/Requirements.js +9 -8
- package/dist/ts/ts/CWL/ToolDescription.d.ts +6 -3
- package/dist/ts/ts/CWL/ToolDescription.d.ts.map +1 -1
- package/dist/ts/ts/CWL/ToolDescription.js +13 -4
- package/dist/ts/ts/CWL/WorkflowDescription.d.ts +6 -3
- package/dist/ts/ts/CWL/WorkflowDescription.d.ts.map +1 -1
- package/dist/ts/ts/CWL/WorkflowDescription.js +13 -4
- package/dist/ts/ts/CWL/WorkflowSteps.d.ts +1 -1
- package/dist/ts/ts/CWL/WorkflowSteps.js +1 -1
- package/dist/ts/ts/Contract/Git.d.ts.map +1 -1
- package/dist/ts/ts/Contract/Git.js +1 -1
- package/dist/ts/ts/ContractIO/ContractIO.d.ts +3 -3
- package/dist/ts/ts/ContractIO/ContractIO.d.ts.map +1 -1
- package/dist/ts/ts/ContractIO/ContractIO.js +27 -23
- package/dist/ts/ts/Conversion/Basic.d.ts.map +1 -1
- package/dist/ts/ts/Conversion/Basic.js +6 -6
- package/dist/ts/ts/Conversion/Workflow.js +3 -3
- package/dist/ts/ts/Core/DataContext.d.ts +21 -29
- package/dist/ts/ts/Core/DataContext.d.ts.map +1 -1
- package/dist/ts/ts/Core/DataContext.js +70 -84
- package/dist/ts/ts/Core/Datamap.d.ts.map +1 -1
- package/dist/ts/ts/Core/Datamap.js +13 -12
- package/dist/ts/ts/Core/OntologyAnnotation.d.ts.map +1 -1
- package/dist/ts/ts/Core/OntologyAnnotation.js +76 -2
- package/dist/ts/ts/Core/Table/ArcTableAux.d.ts +3 -0
- package/dist/ts/ts/Core/Table/ArcTableAux.d.ts.map +1 -1
- package/dist/ts/ts/Core/Table/ArcTableAux.js +23 -10
- package/dist/ts/ts/Core/Table/ArcTables.d.ts +1 -0
- package/dist/ts/ts/Core/Table/ArcTables.d.ts.map +1 -1
- package/dist/ts/ts/Core/Table/ArcTables.js +7 -3
- package/dist/ts/ts/Json/Datamap/DataContext.d.ts.map +1 -1
- package/dist/ts/ts/Json/Datamap/DataContext.js +6 -6
- package/dist/ts/ts/ROCrate/LDTypes/Dataset.js +1 -1
- package/dist/ts/ts/ROCrateIO.d.ts +1 -0
- package/dist/ts/ts/ROCrateIO.d.ts.map +1 -1
- package/dist/ts/ts/ROCrateIO.js +6 -3
- package/dist/ts/ts/Spreadsheet/DatamapTable/DatamapColumn.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/DatamapTable/DatamapColumn.js +1 -2
- package/dist/ts/ts/Spreadsheet/DatamapTable/DatamapHeader.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/DatamapTable/DatamapHeader.js +6 -7
- package/dist/ts/ts/Spreadsheet/DatamapTable/DatamapTable.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/DatamapTable/DatamapTable.js +2 -2
- package/dist/ts/ts/Yaml/ValidationPackage.d.ts +1 -1
- package/dist/ts/ts/Yaml/ValidationPackage.js +5 -5
- package/dist/ts/ts/Yaml/ValidationPackagesConfig.d.ts +1 -1
- package/dist/ts/ts/Yaml/ValidationPackagesConfig.js +5 -5
- package/dist/ts/ts/Yaml.js +1 -1
- package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/Decode.fs.js +124 -24
- package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/Preprocessing.fs.js +66 -24
- package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/Reader.fs.js +474 -295
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0-alpha.7/Writer.fs.js +659 -0
- package/package.json +1 -1
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0-alpha.4/Writer.fs.js +0 -391
- /package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/Encode.fs.js +0 -0
- /package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/Escapes.fs.js +0 -0
- /package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/FlowToBlock.fs.js +0 -0
- /package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/Interop/JsInterop.fs.js +0 -0
- /package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/Persil.fs.js +0 -0
- /package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/Regex.fs.js +0 -0
- /package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/RegexActivePatterns.fs.js +0 -0
- /package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/StringBuffer.fs.js +0 -0
- /package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.4 → YAMLicious.1.0.0-alpha.7}/YAMLiciousTypes.fs.js +0 -0
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@@ -2,8 +2,8 @@ import { IMap } from '@fable-org/fable-library-js/Util.js';
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import { int32 } from '@fable-org/fable-library-js/Int32.js';
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import { Option } from '@fable-org/fable-library-js/Option.js';
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import { FSharpList } from '@fable-org/fable-library-js/List.js';
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import { YAMLElement_$union } from '../fable_modules/YAMLicious.1.0.0-alpha.
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import { IGetters } from '../fable_modules/YAMLicious.1.0.0-alpha.
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import { YAMLElement_$union } from '../fable_modules/YAMLicious.1.0.0-alpha.7/YAMLiciousTypes.fs.js';
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import { IGetters } from '../fable_modules/YAMLicious.1.0.0-alpha.7/Decode.fs.js';
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import { DynamicObj } from '../fable_modules/DynamicObj.7.1.0/DynamicObj.fs.js';
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import { SchemaDefRequirementType, SoftwarePackage, InputEnumSchema, InputRecordSchema, InputRecordField, InputArraySchema, CWLType_$union, SchemaSaladString_$union } from './CWLTypes.js';
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import { CWLOutput, OutputBinding } from './Outputs.js';
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@@ -19,6 +19,8 @@ import { CWLParameterReference } from './ParameterReference.js';
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export declare function ResizeArray_map<$a, $b>(f: ((arg0: $a) => $b), a: $a[]): $b[];
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export declare function Decode_countLeadingSpaces(line: string): int32;
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export declare function Decode_isBlankLine(line: string): boolean;
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export declare function Decode_normalizeLineEndings(yaml: string): string;
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export declare function Decode_stripLeadingShebang(yaml: string): string;
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export declare function Decode_tryParseBlockScalarHeader(line: string): Option<int32>;
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export declare function Decode_normalizeYamlInput(yaml: string): string;
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export declare function Decode_removeFullLineComments(yaml: string): string;
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@@ -62,14 +64,14 @@ export declare function Decode_cwlSimpleTypeFromString(s: string): CWLType_$unio
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* Recursively parse array shorthand notation (File[][], string[][][], etc.)
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*/
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export declare function Decode_parseArrayShorthand(typeStr: string): Option<CWLType_$union>;
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export declare function inputArraySchemaDecoder$
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export declare const inputArraySchemaDecoder$
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export declare function inputRecordFieldDecoder$
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export declare const inputRecordFieldDecoder$
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export declare function inputRecordSchemaDecoder$
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export declare const inputRecordSchemaDecoder$
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export declare function inputEnumSchemaDecoder$
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export declare const inputEnumSchemaDecoder$
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export declare function inputArraySchemaDecoder$0040324(): ((arg0: YAMLElement_$union) => InputArraySchema);
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export declare const inputArraySchemaDecoder$0040324$002D1: any;
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export declare function inputRecordFieldDecoder$0040338(): ((arg0: YAMLElement_$union) => InputRecordField);
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export declare const inputRecordFieldDecoder$0040338$002D1: any;
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export declare function inputRecordSchemaDecoder$0040377(): ((arg0: YAMLElement_$union) => InputRecordSchema);
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export declare const inputRecordSchemaDecoder$0040377$002D1: any;
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export declare function inputEnumSchemaDecoder$0040404(): ((arg0: YAMLElement_$union) => InputEnumSchema);
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export declare const inputEnumSchemaDecoder$0040404$002D1: any;
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export declare const Decode_inputArraySchemaDecoder: ((arg0: YAMLElement_$union) => InputArraySchema);
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export declare const Decode_inputRecordFieldDecoder: ((arg0: YAMLElement_$union) => InputRecordField);
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/**
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@@ -176,6 +178,7 @@ export declare function Decode_decodeStepOutputItem(value: YAMLElement_$union):
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export declare const Decode_outputStepsDecoder: (value_2: YAMLElement_$union) => StepOutput_$union[];
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export declare const Decode_docDecoder: (value_1: YAMLElement_$union) => Option<string>;
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export declare const Decode_labelDecoder: (value_1: YAMLElement_$union) => Option<string>;
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export declare const Decode_idDecoder: (value_1: YAMLElement_$union) => Option<string>;
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export declare const Decode_intentDecoder: (value_1: YAMLElement_$union) => Option<string[]>;
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export declare function Decode_hasField(fieldName: string, yamlElement: YAMLElement_$union): boolean;
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export declare function Decode_withDefaultCwlVersion(defaultCwlVersion: string, yamlElement: YAMLElement_$union): YAMLElement_$union;
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@@ -1 +1 @@
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1
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-
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+
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|
package/dist/ts/ts/CWL/Decode.js
CHANGED
|
@@ -1,17 +1,17 @@
|
|
|
1
1
|
import { getEnumerator, disposeSafe, Lazy } from '../../node_modules/@fable-org/fable-library-js/Util.js';
|
|
2
2
|
import { length, takeWhile, toArray, delay, collect, append, empty as empty$1, singleton, head as head$1, map as map$2 } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
|
|
3
|
+
import { replace, join, trimEnd, trimStart, toText, interpolate, printf, substring, trim } from '../../node_modules/@fable-org/fable-library-js/String.js';
|
|
4
|
+
import { item } from '../../node_modules/@fable-org/fable-library-js/Array.js';
|
|
3
5
|
import { isMatch } from '../../node_modules/@fable-org/fable-library-js/RegExp.js';
|
|
4
|
-
import { trimEnd, replace, join, trimStart, toText, interpolate, printf, substring, trim } from '../../node_modules/@fable-org/fable-library-js/String.js';
|
|
5
6
|
import { value, map as map$1, unwrap, defaultArg, some, bind } from '../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
6
|
-
import { item } from '../../node_modules/@fable-org/fable-library-js/Array.js';
|
|
7
7
|
import { choose, isEmpty, head, tail, iterate, map, empty, exists, tryPick, cons, singleton as singleton$1, ofArray, tryHead } from '../../node_modules/@fable-org/fable-library-js/List.js';
|
|
8
|
-
import { YAMLElement_Mapping, YAMLElement_Sequence, YAMLElement_Object, YAMLContent_create_Z1C3A29C9, YAMLElement_Value } from '../fable_modules/YAMLicious.1.0.0-alpha.
|
|
9
|
-
import { read, object, string, bool, resizearray, int } from '../fable_modules/YAMLicious.1.0.0-alpha.
|
|
8
|
+
import { YAMLElement_Mapping, YAMLElement_Sequence, YAMLElement_Object, YAMLContent_create_Z1C3A29C9, YAMLElement_Value } from '../fable_modules/YAMLicious.1.0.0-alpha.7/YAMLiciousTypes.fs.js';
|
|
9
|
+
import { read, object, string, bool, resizearray, int } from '../fable_modules/YAMLicious.1.0.0-alpha.7/Decode.fs.js';
|
|
10
10
|
import { setProperty, setOptionalProperty } from '../fable_modules/DynamicObj.7.1.0/DynObj.fs.js';
|
|
11
11
|
import { DynamicObj } from '../fable_modules/DynamicObj.7.1.0/DynamicObj.fs.js';
|
|
12
12
|
import { SchemaSaladString_Literal, SchemaSaladString_Import, SchemaSaladString_Include, SchemaSaladStringModule_toDirectiveString, CWLType_Dirent, DirentInstance, DirectoryInstance_$ctor, FileInstance_$ctor, CWLType_Null, CWLType_Stdout, CWLType_Boolean, CWLType_Double, CWLType_Float, CWLType_Long, CWLType_Int, CWLType_String, CWLType_Directory, CWLType_File, CWLType_Array, InputArraySchema, InputRecordField, InputRecordSchema, InputEnumSchema, CWLType_Union, CWLType_Record, CWLType_Enum, SoftwarePackage, SchemaDefRequirementType } from './CWLTypes.js';
|
|
13
13
|
import { OutputBinding, CWLOutput, OutputSource_Multiple, OutputSource_Single } from './Outputs.js';
|
|
14
|
-
import { InitialWorkDirEntry_StringEntry, InitialWorkDirEntry_DirentEntry, InitialWorkDirEntry_DirectoryEntry, InitialWorkDirEntry_FileEntry,
|
|
14
|
+
import { InitialWorkDirEntry_StringEntry, InitialWorkDirEntry_DirentEntry, InitialWorkDirEntry_DirectoryEntry, InitialWorkDirEntry_FileEntry, DockerRequirement_create_Z6E6AA686, EnvironmentDef, LoadListingRequirementValue, LoadListingEnum_tryParse_Z721C83C5, ResourceRequirementInstance_$ctor_D76FC00, Requirement_WorkReuseExpressionRequirement, Requirement_WorkReuseRequirement, WorkReuseRequirementValue, Requirement_NetworkAccessExpressionRequirement, Requirement_NetworkAccessRequirement, NetworkAccessRequirementValue, InplaceUpdateRequirementValue, ToolTimeLimitValue_ToolTimeLimitExpression, ToolTimeLimitValue_ToolTimeLimitSeconds, InlineJavascriptRequirementValue, Requirement_StepInputExpressionRequirement, Requirement_MultipleInputFeatureRequirement, Requirement_ScatterFeatureRequirement, Requirement_SubworkflowFeatureRequirement, Requirement_ToolTimeLimitRequirement, Requirement_InplaceUpdateRequirement, Requirement_ResourceRequirement, Requirement_ShellCommandRequirement, Requirement_EnvVarRequirement, Requirement_InitialWorkDirRequirement, Requirement_LoadListingRequirement, Requirement_SoftwareRequirement, Requirement_DockerRequirement, Requirement_SchemaDefRequirement, Requirement_InlineJavascriptRequirement, HintEntry_UnknownHint, HintUnknownValue, HintEntry_KnownHint } from './Requirements.js';
|
|
15
15
|
import { getItemFromDict } from '../../node_modules/@fable-org/fable-library-js/MapUtil.js';
|
|
16
16
|
import { compare } from '../../node_modules/@fable-org/fable-library-js/BigInt.js';
|
|
17
17
|
import { tryParse } from '../../node_modules/@fable-org/fable-library-js/Long.js';
|
|
@@ -45,6 +45,22 @@ function Decode_countLeadingSpaces(line) {
|
|
|
45
45
|
function Decode_isBlankLine(line) {
|
|
46
46
|
return line.trim().length === 0;
|
|
47
47
|
}
|
|
48
|
+
function Decode_normalizeLineEndings(yaml) {
|
|
49
|
+
if (yaml == null) {
|
|
50
|
+
return "";
|
|
51
|
+
} else {
|
|
52
|
+
return replace(yaml, "\r\n", "\n");
|
|
53
|
+
}
|
|
54
|
+
}
|
|
55
|
+
function Decode_stripLeadingShebang(yaml) {
|
|
56
|
+
const normalized = Decode_normalizeLineEndings(yaml);
|
|
57
|
+
const lines = normalized.split("\n");
|
|
58
|
+
if (lines.length > 0 && item(0, lines).startsWith("#!")) {
|
|
59
|
+
return join("\n", lines.slice(1, lines.length));
|
|
60
|
+
} else {
|
|
61
|
+
return normalized;
|
|
62
|
+
}
|
|
63
|
+
}
|
|
48
64
|
function Decode_tryParseBlockScalarHeader(line) {
|
|
49
65
|
if (Decode_isBlankLine(line)) {
|
|
50
66
|
return void 0;
|
|
@@ -55,8 +71,7 @@ function Decode_tryParseBlockScalarHeader(line) {
|
|
|
55
71
|
}
|
|
56
72
|
}
|
|
57
73
|
function Decode_normalizeYamlInput(yaml) {
|
|
58
|
-
const normalized =
|
|
59
|
-
const lines = normalized.split("\n");
|
|
74
|
+
const normalized = Decode_stripLeadingShebang(yaml);
|
|
60
75
|
const filtered = [];
|
|
61
76
|
let blockScalarIndent = void 0;
|
|
62
77
|
const processLine = (line_mut) => {
|
|
@@ -89,7 +104,7 @@ function Decode_normalizeYamlInput(yaml) {
|
|
|
89
104
|
break;
|
|
90
105
|
}
|
|
91
106
|
};
|
|
92
|
-
const array =
|
|
107
|
+
const array = normalized.split("\n");
|
|
93
108
|
array.forEach(processLine);
|
|
94
109
|
return trimEnd(join("\n", toArray(filtered)));
|
|
95
110
|
}
|
|
@@ -178,13 +193,22 @@ function Decode_isRecoverableDecodingError(ex) {
|
|
|
178
193
|
}
|
|
179
194
|
}
|
|
180
195
|
function Decode_readSanitizedYaml(yaml) {
|
|
181
|
-
const
|
|
196
|
+
const prepared = Decode_stripLeadingShebang(yaml);
|
|
182
197
|
const tryRead = (text) => Decode_removeYamlComments(read(text));
|
|
183
198
|
try {
|
|
184
|
-
return tryRead(
|
|
199
|
+
return tryRead(prepared);
|
|
185
200
|
} catch (matchValue) {
|
|
186
201
|
if (Decode_isRecoverableDecodingError(matchValue)) {
|
|
187
|
-
|
|
202
|
+
const normalized = Decode_normalizeYamlInput(prepared);
|
|
203
|
+
try {
|
|
204
|
+
return tryRead(normalized);
|
|
205
|
+
} catch (matchValue_1) {
|
|
206
|
+
if (Decode_isRecoverableDecodingError(matchValue_1)) {
|
|
207
|
+
return tryRead(Decode_removeFullLineComments(normalized));
|
|
208
|
+
} else {
|
|
209
|
+
throw matchValue_1;
|
|
210
|
+
}
|
|
211
|
+
}
|
|
188
212
|
} else {
|
|
189
213
|
throw matchValue;
|
|
190
214
|
}
|
|
@@ -578,40 +602,40 @@ function Decode_parseArrayShorthand(typeStr) {
|
|
|
578
602
|
return void 0;
|
|
579
603
|
}
|
|
580
604
|
}
|
|
581
|
-
function inputArraySchemaDecoder$
|
|
605
|
+
function inputArraySchemaDecoder$0040324() {
|
|
582
606
|
return (value_3) => object((get$) => {
|
|
583
607
|
let objectArg, objectArg_1, objectArg_2, objectArg_3;
|
|
584
608
|
return new InputArraySchema(Decode_cwlTypeDecoder$0027((objectArg = get$.Required, objectArg.Field("items", (x) => x))), (objectArg_1 = get$.Optional, objectArg_1.Field("label", string)), (objectArg_2 = get$.Optional, objectArg_2.Field("doc", string)), (objectArg_3 = get$.Optional, objectArg_3.Field("name", string)));
|
|
585
609
|
}, value_3);
|
|
586
610
|
}
|
|
587
|
-
const inputArraySchemaDecoder$
|
|
588
|
-
function inputRecordFieldDecoder$
|
|
611
|
+
const inputArraySchemaDecoder$0040324$002D1 = new Lazy(inputArraySchemaDecoder$0040324);
|
|
612
|
+
function inputRecordFieldDecoder$0040338() {
|
|
589
613
|
return (value_3) => object((get$) => {
|
|
590
614
|
let objectArg, objectArg_1, objectArg_2, objectArg_3;
|
|
591
615
|
return new InputRecordField((objectArg = get$.Required, objectArg.Field("name", string)), Decode_cwlTypeDecoder$0027((objectArg_1 = get$.Required, objectArg_1.Field("type", (x) => x))), (objectArg_2 = get$.Optional, objectArg_2.Field("doc", string)), (objectArg_3 = get$.Optional, objectArg_3.Field("label", string)));
|
|
592
616
|
}, value_3);
|
|
593
617
|
}
|
|
594
|
-
const inputRecordFieldDecoder$
|
|
595
|
-
function inputRecordSchemaDecoder$
|
|
618
|
+
const inputRecordFieldDecoder$0040338$002D1 = new Lazy(inputRecordFieldDecoder$0040338);
|
|
619
|
+
function inputRecordSchemaDecoder$0040377() {
|
|
596
620
|
return (value_3) => object((get$) => {
|
|
597
621
|
let fieldsElement, objectArg, element, matchValue, objectArg_1, objectArg_2, objectArg_3;
|
|
598
622
|
return new InputRecordSchema((fieldsElement = (objectArg = get$.Optional, objectArg.Field("fields", (x) => x)), fieldsElement == null ? void 0 : value(fieldsElement).tag === /* Object */
|
|
599
623
|
3 ? isEmpty(value(fieldsElement).fields[0]) ? [] : (element = value(fieldsElement), matchValue = Decode_tryDecodeFieldsAsArray(element), matchValue == null ? Decode_tryDecodeFieldsAsMap(element) : value(matchValue)) : (element = value(fieldsElement), matchValue = Decode_tryDecodeFieldsAsArray(element), matchValue == null ? Decode_tryDecodeFieldsAsMap(element) : value(matchValue))), (objectArg_1 = get$.Optional, objectArg_1.Field("label", string)), (objectArg_2 = get$.Optional, objectArg_2.Field("doc", string)), (objectArg_3 = get$.Optional, objectArg_3.Field("name", string)));
|
|
600
624
|
}, value_3);
|
|
601
625
|
}
|
|
602
|
-
const inputRecordSchemaDecoder$
|
|
603
|
-
function inputEnumSchemaDecoder$
|
|
626
|
+
const inputRecordSchemaDecoder$0040377$002D1 = new Lazy(inputRecordSchemaDecoder$0040377);
|
|
627
|
+
function inputEnumSchemaDecoder$0040404() {
|
|
604
628
|
return (value_5) => object((get$) => {
|
|
605
629
|
let objectArg, objectArg_1, objectArg_2, objectArg_3;
|
|
606
630
|
return new InputEnumSchema((objectArg = get$.Required, objectArg.Field("symbols", (value) => resizearray(string, value))), (objectArg_1 = get$.Optional, objectArg_1.Field("label", string)), (objectArg_2 = get$.Optional, objectArg_2.Field("doc", string)), (objectArg_3 = get$.Optional, objectArg_3.Field("name", string)));
|
|
607
631
|
}, value_5);
|
|
608
632
|
}
|
|
609
|
-
const inputEnumSchemaDecoder$
|
|
610
|
-
const Decode_inputArraySchemaDecoder = inputArraySchemaDecoder$
|
|
611
|
-
const Decode_inputRecordFieldDecoder = inputRecordFieldDecoder$
|
|
633
|
+
const inputEnumSchemaDecoder$0040404$002D1 = new Lazy(inputEnumSchemaDecoder$0040404);
|
|
634
|
+
const Decode_inputArraySchemaDecoder = inputArraySchemaDecoder$0040324$002D1.Value;
|
|
635
|
+
const Decode_inputRecordFieldDecoder = inputRecordFieldDecoder$0040338$002D1.Value;
|
|
612
636
|
function Decode_tryDecodeFieldsAsArray(element) {
|
|
613
637
|
try {
|
|
614
|
-
return resizearray(inputRecordFieldDecoder$
|
|
638
|
+
return resizearray(inputRecordFieldDecoder$0040338$002D1.Value, element);
|
|
615
639
|
} catch (matchValue) {
|
|
616
640
|
if (Decode_isRecoverableDecodingError(matchValue)) {
|
|
617
641
|
return void 0;
|
|
@@ -642,8 +666,8 @@ function Decode_tryDecodeFieldsAsMap(element) {
|
|
|
642
666
|
}
|
|
643
667
|
}
|
|
644
668
|
}
|
|
645
|
-
const Decode_inputRecordSchemaDecoder = inputRecordSchemaDecoder$
|
|
646
|
-
const Decode_inputEnumSchemaDecoder = inputEnumSchemaDecoder$
|
|
669
|
+
const Decode_inputRecordSchemaDecoder = inputRecordSchemaDecoder$0040377$002D1.Value;
|
|
670
|
+
const Decode_inputEnumSchemaDecoder = inputEnumSchemaDecoder$0040404$002D1.Value;
|
|
647
671
|
function Decode_cwlTypeDecoder$0027(element) {
|
|
648
672
|
let collection;
|
|
649
673
|
const parseTypeString = (typeStr) => {
|
|
@@ -669,16 +693,29 @@ function Decode_cwlTypeDecoder$0027(element) {
|
|
|
669
693
|
case /* Object */
|
|
670
694
|
3: {
|
|
671
695
|
if (!isEmpty(element.fields[0])) {
|
|
672
|
-
|
|
673
|
-
|
|
674
|
-
|
|
675
|
-
|
|
676
|
-
|
|
677
|
-
|
|
678
|
-
|
|
696
|
+
switch (head(element.fields[0]).tag) {
|
|
697
|
+
case /* Value */
|
|
698
|
+
1: {
|
|
699
|
+
if (isEmpty(tail(element.fields[0]))) {
|
|
700
|
+
matchResult = 0;
|
|
701
|
+
v = head(element.fields[0]).fields[0];
|
|
702
|
+
} else {
|
|
703
|
+
matchResult = 2;
|
|
704
|
+
}
|
|
705
|
+
break;
|
|
679
706
|
}
|
|
680
|
-
|
|
681
|
-
|
|
707
|
+
case /* Sequence */
|
|
708
|
+
2: {
|
|
709
|
+
if (isEmpty(tail(element.fields[0]))) {
|
|
710
|
+
matchResult = 1;
|
|
711
|
+
items = head(element.fields[0]).fields[0];
|
|
712
|
+
} else {
|
|
713
|
+
matchResult = 2;
|
|
714
|
+
}
|
|
715
|
+
break;
|
|
716
|
+
}
|
|
717
|
+
default:
|
|
718
|
+
matchResult = 2;
|
|
682
719
|
}
|
|
683
720
|
} else {
|
|
684
721
|
matchResult = 2;
|
|
@@ -733,7 +770,7 @@ function Decode_cwlTypeDecoder$0027(element) {
|
|
|
733
770
|
switch (matchResult_1) {
|
|
734
771
|
case 0: {
|
|
735
772
|
const matchValue_1 = v_1.Value;
|
|
736
|
-
return matchValue_1 === "record" ? CWLType_Record(inputRecordSchemaDecoder$
|
|
773
|
+
return matchValue_1 === "record" ? CWLType_Record(inputRecordSchemaDecoder$0040377$002D1.Value(element)) : matchValue_1 === "enum" ? CWLType_Enum(inputEnumSchemaDecoder$0040404$002D1.Value(element)) : matchValue_1 === "array" ? CWLType_Array(inputArraySchemaDecoder$0040324$002D1.Value(element)) : parseTypeString(matchValue_1);
|
|
737
774
|
}
|
|
738
775
|
case 1:
|
|
739
776
|
return Decode_cwlTypeDecoder$0027((objectArg_1 = get$.Required, objectArg_1.Field("type", (x_1) => x_1)));
|
|
@@ -841,14 +878,21 @@ const Decode_cwlTypeDecoder = (value_1) => object((get$) => {
|
|
|
841
878
|
}
|
|
842
879
|
break;
|
|
843
880
|
}
|
|
844
|
-
|
|
881
|
+
case /* Sequence */
|
|
882
|
+
2: {
|
|
845
883
|
matchResult = 2;
|
|
884
|
+
break;
|
|
885
|
+
}
|
|
886
|
+
default:
|
|
887
|
+
matchResult = 3;
|
|
846
888
|
}
|
|
847
889
|
switch (matchResult) {
|
|
848
890
|
case 0:
|
|
849
891
|
return v.Value;
|
|
850
892
|
case 1:
|
|
851
893
|
return void 0;
|
|
894
|
+
case 2:
|
|
895
|
+
return void 0;
|
|
852
896
|
default:
|
|
853
897
|
throw new Error("Unexpected YAMLElement in cwlTypeDecoder");
|
|
854
898
|
}
|
|
@@ -881,9 +925,9 @@ const Decode_outputsDecoder = (value) => object((get$) => {
|
|
|
881
925
|
return objectArg.Field("outputs", Decode_outputArrayDecoder);
|
|
882
926
|
}, value);
|
|
883
927
|
function Decode_dockerRequirementDecoder(get$) {
|
|
884
|
-
let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5;
|
|
928
|
+
let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, objectArg_6;
|
|
885
929
|
const dockerFile = map$1(Decode_decodeSchemaSaladString, (objectArg = get$.Optional, objectArg.Field("dockerFile", (x) => x)));
|
|
886
|
-
return
|
|
930
|
+
return DockerRequirement_create_Z6E6AA686(unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("dockerPull", string))), void 0, unwrap(dockerFile), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("dockerImageId", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("dockerLoad", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("dockerImport", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("dockerOutputDirectory", string))), unwrap((objectArg_6 = get$.Optional, objectArg_6.Field("cwltool:dockerRunOptions", Decode_decodeStringArrayOrScalar))));
|
|
887
931
|
}
|
|
888
932
|
function Decode_envVarRequirementDecoder(get$) {
|
|
889
933
|
let envDefElement;
|
|
@@ -2072,6 +2116,10 @@ const Decode_labelDecoder = (value_1) => object((get$) => {
|
|
|
2072
2116
|
const objectArg = get$.Optional;
|
|
2073
2117
|
return objectArg.Field("label", string);
|
|
2074
2118
|
}, value_1);
|
|
2119
|
+
const Decode_idDecoder = (value_1) => object((get$) => {
|
|
2120
|
+
const objectArg = get$.Optional;
|
|
2121
|
+
return objectArg.Field("id", string);
|
|
2122
|
+
}, value_1);
|
|
2075
2123
|
const Decode_intentDecoder = (value_1) => object((get$) => {
|
|
2076
2124
|
let objectArg;
|
|
2077
2125
|
return bind(Decode_stringOrStringArrayDecoder, (objectArg = get$.Optional, objectArg.Field("intent", (x) => x)));
|
|
@@ -2256,12 +2304,12 @@ function Decode_commandLineToolDecoder(yamlCWL) {
|
|
|
2256
2304
|
const baseCommand = Decode_baseCommandDecoder(yamlCWL);
|
|
2257
2305
|
const doc = Decode_docDecoder(yamlCWL);
|
|
2258
2306
|
const label = Decode_labelDecoder(yamlCWL);
|
|
2259
|
-
const description = new CWLToolDescription(outputs, cwlVersion);
|
|
2307
|
+
const description = new CWLToolDescription(outputs, cwlVersion, void 0, void 0, void 0, void 0, void 0, void 0, void 0, void 0, unwrap(Decode_idDecoder(yamlCWL)));
|
|
2260
2308
|
let metadata;
|
|
2261
2309
|
const md = new DynamicObj();
|
|
2262
2310
|
object((get$) => Decode_overflowDecoder(md, get$.Overflow.FieldList(ofArray(["inputs", "outputs", "class", "id", "label", "doc", "intent", "requirements", "hints", "cwlVersion", "baseCommand", "arguments", "stdin", "stderr", "stdout", "successCodes", "temporaryFailCodes", "permanentFailCodes"]))), yamlCWL);
|
|
2263
2311
|
metadata = md;
|
|
2264
|
-
object((get$_1) => Decode_overflowDecoder(description, get$_1.MultipleOptional.FieldList(ofArray(["
|
|
2312
|
+
object((get$_1) => Decode_overflowDecoder(description, get$_1.MultipleOptional.FieldList(ofArray(["arguments", "stdin", "stderr", "stdout", "successCodes", "temporaryFailCodes", "permanentFailCodes"]))), yamlCWL);
|
|
2265
2313
|
if (inputs != null) {
|
|
2266
2314
|
description.Inputs = inputs;
|
|
2267
2315
|
}
|
|
@@ -2300,12 +2348,11 @@ function Decode_expressionToolDecoder(yamlCWL) {
|
|
|
2300
2348
|
const description = new CWLExpressionToolDescription(outputs, object((get$) => {
|
|
2301
2349
|
const objectArg = get$.Required;
|
|
2302
2350
|
return objectArg.Field("expression", Decode_decodeStringOrExpression);
|
|
2303
|
-
}, yamlCWL), cwlVersion);
|
|
2351
|
+
}, yamlCWL), cwlVersion, void 0, void 0, void 0, void 0, void 0, void 0, void 0, unwrap(Decode_idDecoder(yamlCWL)));
|
|
2304
2352
|
let metadata;
|
|
2305
2353
|
const md = new DynamicObj();
|
|
2306
2354
|
object((get$_1) => Decode_overflowDecoder(md, get$_1.Overflow.FieldList(ofArray(["inputs", "outputs", "class", "id", "label", "doc", "intent", "requirements", "hints", "cwlVersion", "expression"]))), yamlCWL);
|
|
2307
2355
|
metadata = md;
|
|
2308
|
-
object((get$_2) => Decode_overflowDecoder(description, get$_2.MultipleOptional.FieldList(singleton$1("id"))), yamlCWL);
|
|
2309
2356
|
if (inputs != null) {
|
|
2310
2357
|
description.Inputs = inputs;
|
|
2311
2358
|
}
|
|
@@ -2344,12 +2391,11 @@ function Decode_operationDecoder(yamlCWL) {
|
|
|
2344
2391
|
const intent = Decode_intentDecoder(yamlCWL);
|
|
2345
2392
|
const doc = Decode_docDecoder(yamlCWL);
|
|
2346
2393
|
const label = Decode_labelDecoder(yamlCWL);
|
|
2347
|
-
const description = new CWLOperationDescription(inputs, outputs, cwlVersion);
|
|
2394
|
+
const description = new CWLOperationDescription(inputs, outputs, cwlVersion, void 0, void 0, void 0, void 0, void 0, void 0, unwrap(Decode_idDecoder(yamlCWL)));
|
|
2348
2395
|
let metadata;
|
|
2349
2396
|
const md = new DynamicObj();
|
|
2350
2397
|
object((get$) => Decode_overflowDecoder(md, get$.Overflow.FieldList(ofArray(["inputs", "outputs", "label", "doc", "intent", "class", "id", "requirements", "hints", "cwlVersion"]))), yamlCWL);
|
|
2351
2398
|
metadata = md;
|
|
2352
|
-
object((get$_1) => Decode_overflowDecoder(description, get$_1.MultipleOptional.FieldList(singleton$1("id"))), yamlCWL);
|
|
2353
2399
|
if (requirements != null) {
|
|
2354
2400
|
description.Requirements = requirements;
|
|
2355
2401
|
}
|
|
@@ -2386,12 +2432,11 @@ function Decode_workflowDecoder(yamlCWL) {
|
|
|
2386
2432
|
const steps = Decode_stepsDecoderWithVersion(cwlVersion)(yamlCWL);
|
|
2387
2433
|
const doc = Decode_docDecoder(yamlCWL);
|
|
2388
2434
|
const label = Decode_labelDecoder(yamlCWL);
|
|
2389
|
-
const description = new CWLWorkflowDescription(steps, inputs, outputs, cwlVersion);
|
|
2435
|
+
const description = new CWLWorkflowDescription(steps, inputs, outputs, cwlVersion, void 0, void 0, void 0, void 0, void 0, void 0, unwrap(Decode_idDecoder(yamlCWL)));
|
|
2390
2436
|
let metadata;
|
|
2391
2437
|
const md = new DynamicObj();
|
|
2392
2438
|
object((get$) => Decode_overflowDecoder(md, get$.Overflow.FieldList(ofArray(["inputs", "outputs", "label", "doc", "intent", "class", "steps", "id", "requirements", "hints", "cwlVersion"]))), yamlCWL);
|
|
2393
2439
|
metadata = md;
|
|
2394
|
-
object((get$_1) => Decode_overflowDecoder(description, get$_1.MultipleOptional.FieldList(singleton$1("id"))), yamlCWL);
|
|
2395
2440
|
if (requirements != null) {
|
|
2396
2441
|
description.Requirements = requirements;
|
|
2397
2442
|
}
|
|
@@ -2664,4 +2709,4 @@ function DecodeParameters_decodeYAMLParameterFile(yaml) {
|
|
|
2664
2709
|
return DecodeParameters_cwlparameterReferenceArrayDecoder(read(yaml));
|
|
2665
2710
|
}
|
|
2666
2711
|
|
|
2667
|
-
export { DecodeParameters_cwlParameterReferenceDecoder, DecodeParameters_cwlparameterReferenceArrayDecoder, DecodeParameters_decodeYAMLParameterFile, Decode_baseCommandDecoder, Decode_boolOptionFieldDecoder, Decode_classDecoder, Decode_commandLineToolDecoder, Decode_countLeadingSpaces, Decode_cwlSimpleTypeFromString, Decode_cwlTypeDecoder, Decode_cwlTypeDecoder$0027, Decode_cwlTypeStringMatcher, Decode_decodeCWLProcessingUnit, Decode_decodeCWLProcessingUnitElement, Decode_decodeCommandLineTool, Decode_decodeExpressionTool, Decode_decodeHintElement, Decode_decodeOperation, Decode_decodeResourceScalar, Decode_decodeSchemaSaladString, Decode_decodeStepInputFromArrayItem, Decode_decodeStepInputFromValue, Decode_decodeStepInputsFromArray, Decode_decodeStepInputsFromMap, Decode_decodeStepOutputItem, Decode_decodeStringArrayOrScalar, Decode_decodeStringOrExpression, Decode_decodeWorkflow, Decode_decodeWorkflowStepFromArrayItem, Decode_decodeWorkflowStepFromValueWithId, Decode_direntDecoder, Decode_docDecoder, Decode_dockerRequirementDecoder, Decode_envVarRequirementDecoder, Decode_expressionStringOptionFieldDecoder, Decode_expressionToolDecoder, Decode_hasField, Decode_hintArrayDecoder, Decode_hintsDecoder, Decode_initialWorkDirEntryDecoder, Decode_initialWorkDirRequirementDecoder, Decode_inlineJavascriptRequirementDecoder, Decode_inplaceUpdateRequirementDecoder, Decode_inputArrayDecoder, Decode_inputArraySchemaDecoder, Decode_inputBindingDecoder, Decode_inputEnumSchemaDecoder, Decode_inputRecordFieldDecoder, Decode_inputRecordSchemaDecoder, Decode_inputStepDecoder, Decode_inputsDecoder, Decode_intentDecoder, Decode_isBlankLine, Decode_isRecoverableDecodingError, Decode_labelDecoder, Decode_linkMergeFieldDecoder, Decode_loadListingRequirementDecoder, Decode_networkAccessRequirementDecoder, Decode_normalizeYamlInput, Decode_operationDecoder, Decode_optionalResourceField, Decode_outputArrayDecoder, Decode_outputBindingDecoder, Decode_outputBindingGlobDecoder, Decode_outputSourceDecoder, Decode_outputStepsDecoder, Decode_outputsDecoder, Decode_overflowDecoder, Decode_parseArrayShorthand, Decode_pickValueFieldDecoder, Decode_readSanitizedYaml, Decode_removeFullLineComments, Decode_removeYamlComments, Decode_requirementArrayDecoder, Decode_requirementFromTypeName, Decode_requirementsDecoder, Decode_resourceRequirementDecoder, Decode_scatterFieldDecoder, Decode_scatterMethodFieldDecoder, Decode_schemaDefRequirementDecoder, Decode_schemaDefRequirementTypeDecoder, Decode_softwareRequirementDecoder, Decode_sourceArrayFieldDecoder, Decode_stepArrayDecoder, Decode_stepArrayDecoderWithVersion, Decode_stepsDecoder, Decode_stepsDecoderWithVersion, Decode_stringFieldDecoder, Decode_stringOptionFieldDecoder, Decode_stringOrStringArrayDecoder, Decode_toolTimeLimitRequirementDecoder, Decode_tryDecodeBoolScalar, Decode_tryDecodeFieldsAsArray, Decode_tryDecodeFieldsAsMap, Decode_tryDecodeKnownRequirementFromElement, Decode_tryParseBlockScalarHeader, Decode_versionDecoder, Decode_withDefaultCwlVersion, Decode_workReuseRequirementDecoder, Decode_workflowDecoder, Decode_workflowStepRunDecoder, Decode_yamlElementOptionFieldDecoder, ResizeArray_map, inputArraySchemaDecoder$
|
|
2712
|
+
export { DecodeParameters_cwlParameterReferenceDecoder, DecodeParameters_cwlparameterReferenceArrayDecoder, DecodeParameters_decodeYAMLParameterFile, Decode_baseCommandDecoder, Decode_boolOptionFieldDecoder, Decode_classDecoder, Decode_commandLineToolDecoder, Decode_countLeadingSpaces, Decode_cwlSimpleTypeFromString, Decode_cwlTypeDecoder, Decode_cwlTypeDecoder$0027, Decode_cwlTypeStringMatcher, Decode_decodeCWLProcessingUnit, Decode_decodeCWLProcessingUnitElement, Decode_decodeCommandLineTool, Decode_decodeExpressionTool, Decode_decodeHintElement, Decode_decodeOperation, Decode_decodeResourceScalar, Decode_decodeSchemaSaladString, Decode_decodeStepInputFromArrayItem, Decode_decodeStepInputFromValue, Decode_decodeStepInputsFromArray, Decode_decodeStepInputsFromMap, Decode_decodeStepOutputItem, Decode_decodeStringArrayOrScalar, Decode_decodeStringOrExpression, Decode_decodeWorkflow, Decode_decodeWorkflowStepFromArrayItem, Decode_decodeWorkflowStepFromValueWithId, Decode_direntDecoder, Decode_docDecoder, Decode_dockerRequirementDecoder, Decode_envVarRequirementDecoder, Decode_expressionStringOptionFieldDecoder, Decode_expressionToolDecoder, Decode_hasField, Decode_hintArrayDecoder, Decode_hintsDecoder, Decode_idDecoder, Decode_initialWorkDirEntryDecoder, Decode_initialWorkDirRequirementDecoder, Decode_inlineJavascriptRequirementDecoder, Decode_inplaceUpdateRequirementDecoder, Decode_inputArrayDecoder, Decode_inputArraySchemaDecoder, Decode_inputBindingDecoder, Decode_inputEnumSchemaDecoder, Decode_inputRecordFieldDecoder, Decode_inputRecordSchemaDecoder, Decode_inputStepDecoder, Decode_inputsDecoder, Decode_intentDecoder, Decode_isBlankLine, Decode_isRecoverableDecodingError, Decode_labelDecoder, Decode_linkMergeFieldDecoder, Decode_loadListingRequirementDecoder, Decode_networkAccessRequirementDecoder, Decode_normalizeLineEndings, Decode_normalizeYamlInput, Decode_operationDecoder, Decode_optionalResourceField, Decode_outputArrayDecoder, Decode_outputBindingDecoder, Decode_outputBindingGlobDecoder, Decode_outputSourceDecoder, Decode_outputStepsDecoder, Decode_outputsDecoder, Decode_overflowDecoder, Decode_parseArrayShorthand, Decode_pickValueFieldDecoder, Decode_readSanitizedYaml, Decode_removeFullLineComments, Decode_removeYamlComments, Decode_requirementArrayDecoder, Decode_requirementFromTypeName, Decode_requirementsDecoder, Decode_resourceRequirementDecoder, Decode_scatterFieldDecoder, Decode_scatterMethodFieldDecoder, Decode_schemaDefRequirementDecoder, Decode_schemaDefRequirementTypeDecoder, Decode_softwareRequirementDecoder, Decode_sourceArrayFieldDecoder, Decode_stepArrayDecoder, Decode_stepArrayDecoderWithVersion, Decode_stepsDecoder, Decode_stepsDecoderWithVersion, Decode_stringFieldDecoder, Decode_stringOptionFieldDecoder, Decode_stringOrStringArrayDecoder, Decode_stripLeadingShebang, Decode_toolTimeLimitRequirementDecoder, Decode_tryDecodeBoolScalar, Decode_tryDecodeFieldsAsArray, Decode_tryDecodeFieldsAsMap, Decode_tryDecodeKnownRequirementFromElement, Decode_tryParseBlockScalarHeader, Decode_versionDecoder, Decode_withDefaultCwlVersion, Decode_workReuseRequirementDecoder, Decode_workflowDecoder, Decode_workflowStepRunDecoder, Decode_yamlElementOptionFieldDecoder, ResizeArray_map, inputArraySchemaDecoder$0040324, inputArraySchemaDecoder$0040324$002D1, inputEnumSchemaDecoder$0040404, inputEnumSchemaDecoder$0040404$002D1, inputRecordFieldDecoder$0040338, inputRecordFieldDecoder$0040338$002D1, inputRecordSchemaDecoder$0040377, inputRecordSchemaDecoder$0040377$002D1 };
|
|
@@ -2,7 +2,7 @@ import { FSharpChoice$2_$union } from '@fable-org/fable-library-js/Choice.js';
|
|
|
2
2
|
import { SchemaDefRequirementType, InputEnumSchema, InputRecordSchema, InputRecordField, SoftwarePackage, SchemaSaladString_$union, CWLType_$union, InputArraySchema } from './CWLTypes.js';
|
|
3
3
|
import { Option } from '@fable-org/fable-library-js/Option.js';
|
|
4
4
|
import { FSharpList } from '@fable-org/fable-library-js/List.js';
|
|
5
|
-
import { YAMLElement_$union } from '../fable_modules/YAMLicious.1.0.0-alpha.
|
|
5
|
+
import { YAMLElement_$union } from '../fable_modules/YAMLicious.1.0.0-alpha.7/YAMLiciousTypes.fs.js';
|
|
6
6
|
import { HintEntry_$union, Requirement_$union, EnvironmentDef } from './Requirements.js';
|
|
7
7
|
import { CWLOutput, OutputBinding } from './Outputs.js';
|
|
8
8
|
import { CWLInput, InputBinding } from './Inputs.js';
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"Encode.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/CWL/Encode.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,qBAAqB,EAAwD,MAAM,uCAAuC,CAAC;AACpI,OAAO,EAAmC,wBAAwB,EAAE,eAAe,EAAE,iBAAiB,EAAE,gBAAgB,EAAkB,eAAe,EAAE,wBAAwB,EAAE,cAAc,EAAE,gBAAgB,EAAE,MAAM,eAAe,CAAC;AAC7O,OAAO,EAAmC,MAAM,EAAO,MAAM,uCAAuC,CAAC;AAGrG,OAAO,EAA6J,UAAU,EAAE,MAAM,qCAAqC,CAAC;AAC5N,OAAO,EAAgL,kBAAkB,EAAmD,MAAM,iEAAiE,CAAC;AAGpU,OAAO,EAAE,gBAAgB,EAAE,kBAAkB,EAAgQ,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACvV,OAAO,EAAE,SAAS,EAAqC,aAAa,EAAE,MAAM,cAAc,CAAC;AAC3F,OAAO,EAAE,QAAQ,EAAE,YAAY,EAAE,MAAM,aAAa,CAAC;AAGrD,OAAO,EAAE,YAAY,EAAE,sBAAsB,EAAE,iBAAiB,EAAE,mBAAmB,EAAE,SAAS,EAAE,oBAAoB,EAAE,sBAAsB,EAAE,sBAAsB,EAAE,MAAM,oBAAoB,CAAC;AACnM,OAAO,EAAE,wBAAwB,EAAiJ,MAAM,wBAAwB,CAAC;AACjN,OAAO,EAAE,kBAAkB,EAAE,MAAM,sBAAsB,CAAC;AAC1D,OAAO,EAAE,sBAAsB,EAAE,MAAM,0BAA0B,CAAC;AAClE,OAAO,EAAE,4BAA4B,EAAE,MAAM,gCAAgC,CAAC;AAC9E,OAAO,EAAE,uBAAuB,EAAE,MAAM,2BAA2B,CAAC;AAKpE;;GAEG;AACH,wBAAgB,uCAAuC,CAAC,CAAC,EAAE,cAAc,GAAG,qBAAqB,CAAC,MAAM,EAAE,IAAI,CAAC,CAsC9G;AAED;;;GAGG;AACH,wBAAgB,oBAAoB,CAAC,OAAO,EAAE,cAAc,GAAG,MAAM,CAAC,MAAM,CAAC,CA+B5E;AAED;;GAEG;AACH,wBAAgB,aAAa,CAAC,KAAK,EAAE,cAAc,GAAG,OAAO,CA+D5D;AAED,wBAAgB,KAAK,CAAC,CAAC,EAAE,OAAO,GAAG,kBAAkB,CAEpD;AAED,wBAAgB,IAAI,CAAC,KAAK,EAAE,UAAU,CAAC,CAAC,MAAM,EAAE,kBAAkB,CAAC,CAAC,GAAG,kBAAkB,CAKxF;AAED,wBAAgB,kBAAkB,CAAC,GAAG,EAAE,MAAM,GAAG,MAAM,CAEtD;AAED;;;;;GAKG;AACH,wBAAgB,sBAAsB,CAAC,UAAU,EAAE,MAAM,GAAG,kBAAkB,CAG7E;AAED,wBAAgB,uBAAuB,CAAC,KAAK,EAAE,wBAAwB,GAAG,kBAAkB,CAS3F;AAED,wBAAgB,0BAA0B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CAOnE;AAED;;GAEG;AACH,wBAAgB,iCAAiC,CAAC,IAAI,EAAE,cAAc,EAAE,GAAG,kBAAkB,CAG5F;AAED;;GAEG;AACH,wBAAgB,mCAAmC,CAAC,QAAQ,EAAE,eAAe,EAAE,GAAG,kBAAkB,CAMnG;AAED,wBAAgB,WAAW,CAAC,KAAK,EAAE,MAAM,GAAG,CAAC,MAAM,EAAE,kBAAkB,CAAC,CAEvE;AAED,wBAAgB,SAAS,CAAC,GAAG,EAAE,MAAM,GAAG,CAAC,MAAM,EAAE,kBAAkB,CAAC,CAEnE;AAED,wBAAgB,YAAY,CAAC,MAAM,EAAE,MAAM,EAAE,GAAG,CAAC,MAAM,EAAE,kBAAkB,CAAC,CAE3E;AAED,wBAAgB,aAAa,CAAC,CAAC,EAAE,cAAc,GAAG,kBAAkB,CAqHnE;AAED,wBAAgB,sBAAsB,CAAC,KAAK,EAAE,gBAAgB,GAAG,CAAC,MAAM,EAAE,kBAAkB,CAAC,CAE5F;AAED,wBAAgB,uBAAuB,CAAC,MAAM,EAAE,iBAAiB,GAAG,kBAAkB,CAKrF;AAED,wBAAgB,qBAAqB,CAAC,MAAM,EAAE,eAAe,GAAG,kBAAkB,CAEjF;AAED,wBAAgB,sBAAsB,CAAC,MAAM,EAAE,gBAAgB,GAAG,kBAAkB,CAEnF;AAED,wBAAgB,mBAAmB,CAAC,EAAE,EAAE,aAAa,GAAG,kBAAkB,CAEzE;AAED,wBAAgB,yBAAyB,CAAC,MAAM,EAAE,MAAM,EAAE,GAAG,kBAAkB,CAO9E;AAED,wBAAgB,eAAe,CAAC,CAAC,EAAE,SAAS,GAAG,CAAC,MAAM,EAAE,kBAAkB,CAAC,CA2K1E;AAED,wBAAgB,kBAAkB,CAAC,EAAE,EAAE,YAAY,GAAG,kBAAkB,CAGvE;AAED,wBAAgB,cAAc,CAAC,CAAC,EAAE,QAAQ,GAAG,CAAC,MAAM,EAAE,kBAAkB,CAAC,CA0IxE;AAED,wBAAgB,8BAA8B,CAAC,CAAC,EAAE,wBAAwB,GAAG,kBAAkB,CAE9F;AAED,wBAAgB,iBAAiB,CAAC,CAAC,EAAE,kBAAkB,GAAG,kBAAkB,CA4J3E;AAED,wBAAgB,eAAe,CAAC,IAAI,EAAE,gBAAgB,GAAG,kBAAkB,CAO1E;AAED;;GAEG;AACH,wBAAgB,iBAAiB,CAAC,OAAO,EAAE,MAAM,EAAE,GAAG,kBAAkB,CAOvE;AAED,wBAAgB,qBAAqB,CAAC,SAAS,EAAE,sBAAsB,GAAG,kBAAkB,CAE3F;AAED,wBAAgB,qBAAqB,CAAC,SAAS,EAAE,sBAAsB,GAAG,kBAAkB,CAE3F;AAED,wBAAgB,mBAAmB,CAAC,aAAa,EAAE,oBAAoB,GAAG,kBAAkB,CAE3F;AAED,wBAAgB,eAAe,CAAC,EAAE,EAAE,SAAS,GAAG,CAAC,MAAM,EAAE,kBAAkB,CAAC,CA0D3E;AAED,wBAAgB,gBAAgB,CAAC,MAAM,EAAE,SAAS,EAAE,GAAG,kBAAkB,CAExE;AAED,wBAAgB,yBAAyB,CAAC,EAAE,EAAE,mBAAmB,GAAG,kBAAkB,CAErF;AAED,wBAAgB,iBAAiB,CAAC,OAAO,EAAE,iBAAiB,EAAE,GAAG,kBAAkB,CASlF;AAED,wBAAgB,aAAa,CAAC,OAAO,EAAE,MAAM,EAAE,GAAG,kBAAkB,CAOnE;AAED,wBAAgB,qBAAqB,CAAC,GAAG,EAAE,sBAAsB,GAAG,kBAAkB,CA6CrF;AAED,wBAAgB,4BAA4B,CAAC,EAAE,EAAE,kBAAkB,GAAG,kBAAkB,
|
|
1
|
+
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