@nfdi4plants/arctrl 3.0.0-beta.6 → 3.0.0-beta.8

package/dist/ts/ts/Core/IdentifierSetters.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"IdentifierSetters.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Core/IdentifierSetters.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,QAAQ,EAAE,MAAM,qBAAqB,CAAC;AAC/C,OAAO,EAAE,gBAAgB,EAAE,MAAM,EAAE,WAAW,EAAyC,QAAQ,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAEjI,wBAAgB,eAAe,CAAC,OAAO,EAAE,MAAM,EAAE,KAAK,EAAE,QAAQ,GAAG,QAAQ,CAI1E;AAED,wBAAgB,kBAAkB,CAAC,aAAa,EAAE,MAAM,EAAE,KAAK,EAAE,QAAQ,GAAG,QAAQ,CAInF;AAED,wBAAgB,kBAAkB,CAAC,aAAa,EAAE,MAAM,EAAE,KAAK,EAAE,QAAQ,GAAG,QAAQ,CAInF;AAED,wBAAgB,qBAAqB,CAAC,aAAa,EAAE,MAAM,EAAE,QAAQ,EAAE,WAAW,GAAG,WAAW,CAI/F;AAED,wBAAgB,gBAAgB,CAAC,aAAa,EAAE,MAAM,EAAE,GAAG,EAAE,MAAM,GAAG,MAAM,CAI3E;AAED,wBAAgB,0BAA0B,CAAC,aAAa,EAAE,MAAM,EAAE,aAAa,EAAE,gBAAgB,GAAG,gBAAgB,CAInH"}
+{"version":3,"file":"IdentifierSetters.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Core/IdentifierSetters.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,QAAQ,EAAE,MAAM,qBAAqB,CAAC;AAC/C,OAAO,EAAE,gBAAgB,EAAE,MAAM,EAAE,WAAW,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAE1F,wBAAgB,eAAe,CAAC,OAAO,EAAE,MAAM,EAAE,KAAK,EAAE,QAAQ,GAAG,QAAQ,CAI1E;AAED,wBAAgB,kBAAkB,CAAC,aAAa,EAAE,MAAM,EAAE,KAAK,EAAE,QAAQ,GAAG,QAAQ,CAInF;AAED,wBAAgB,kBAAkB,CAAC,aAAa,EAAE,MAAM,EAAE,KAAK,EAAE,QAAQ,GAAG,QAAQ,CAInF;AAED,wBAAgB,qBAAqB,CAAC,aAAa,EAAE,MAAM,EAAE,QAAQ,EAAE,WAAW,GAAG,WAAW,CAI/F;AAED,wBAAgB,gBAAgB,CAAC,aAAa,EAAE,MAAM,EAAE,GAAG,EAAE,MAAM,GAAG,MAAM,CAI3E;AAED,wBAAgB,0BAA0B,CAAC,aAAa,EAAE,MAAM,EAAE,aAAa,EAAE,gBAAgB,GAAG,gBAAgB,CAInH"}

package/dist/ts/ts/Core/IdentifierSetters.js

@@ -1,5 +1,4 @@
 import { checkValidCharacters } from './Helper/Identifier.js';
-import { ArcWorkflow__set_Identifier_Z721C83C5 } from './ArcTypes.js';
 
 function setArcTableName(newName, table) {
   checkValidCharacters(newName);
@@ -18,7 +17,7 @@ function setStudyIdentifier(newIdentifier, study) {
 }
 function setWorkflowIdentifier(newIdentifier, workflow) {
   checkValidCharacters(newIdentifier);
-  ArcWorkflow__set_Identifier_Z721C83C5(workflow, newIdentifier);
+  workflow.Identifier = newIdentifier;
   return workflow;
 }
 function setRunIdentifier(newIdentifier, run) {

package/dist/ts/ts/Json/Workflow.d.ts

@@ -1,6 +1,6 @@
 import { Decoder$1, IEncodable } from '../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
-import { ArcWorkflow } from '../Core/ArcTypes.js';
 import { OntologyAnnotation } from '../Core/OntologyAnnotation.js';
+import { ArcWorkflow } from '../Core/ArcTypes.js';
 import { IMap } from '@fable-org/fable-library-js/Util.js';
 import { int32 } from '@fable-org/fable-library-js/Int32.js';
 import { CompositeCell_$union } from '../Core/Table/CompositeCell.js';

package/dist/ts/ts/Json/Workflow.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Workflow.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Json/Workflow.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,oDAAoD,CAAC;AAC9G,OAAO,EAAgC,WAAW,EAAuV,MAAM,qBAAqB,CAAC;AAGra,OAAO,EAAE,kBAAkB,EAAE,MAAM,+BAA+B,CAAC;AAanE,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAC3D,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAE,oBAAoB,EAAE,MAAM,gCAAgC,CAAC;AAEtE,wBAAgB,OAAO,CAAC,QAAQ,EAAE,WAAW,GAAG,UAAU,CAiCzD;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,WAAW,CAGzC,CAAC;AAEH,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,IAAI,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,IAAI,CAAC,kBAAkB,EAAE,KAAK,CAAC,EAAE,SAAS,EAAE,IAAI,CAAC,oBAAoB,EAAE,KAAK,CAAC,EAAE,QAAQ,EAAE,WAAW,GAAG,UAAU,CAiC7L;AAED,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,MAAM,EAAE,EAAE,OAAO,EAAE,kBAAkB,EAAE,EAAE,SAAS,EAAE,oBAAoB,EAAE,GAAG,SAAS,CAAC,WAAW,CAAC,CAKjJ"}
+{"version":3,"file":"Workflow.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Json/Workflow.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,oDAAoD,CAAC;AAG9G,OAAO,EAAE,kBAAkB,EAAE,MAAM,+BAA+B,CAAC;AAYnE,OAAO,EAAE,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAElD,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAC3D,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAE,oBAAoB,EAAE,MAAM,gCAAgC,CAAC;AAEtE,wBAAgB,OAAO,CAAC,QAAQ,EAAE,WAAW,GAAG,UAAU,CAiCzD;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,WAAW,CAGzC,CAAC;AAEH,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,IAAI,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,IAAI,CAAC,kBAAkB,EAAE,KAAK,CAAC,EAAE,SAAS,EAAE,IAAI,CAAC,oBAAoB,EAAE,KAAK,CAAC,EAAE,QAAQ,EAAE,WAAW,GAAG,UAAU,CAiC7L;AAED,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,MAAM,EAAE,EAAE,OAAO,EAAE,kBAAkB,EAAE,EAAE,SAAS,EAAE,oBAAoB,EAAE,GAAG,SAAS,CAAC,WAAW,CAAC,CAKjJ"}

package/dist/ts/ts/Json/Workflow.js

@@ -1,6 +1,5 @@
 import { choose, ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';
 import { map, unwrap } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { ArcWorkflow__get_Identifier, ArcWorkflow__get_WorkflowType, ArcWorkflow__get_Title, ArcWorkflow__get_URI, ArcWorkflow__get_Description, ArcWorkflow__get_Version, ArcWorkflow__get_DataMap, ArcWorkflow__get_SubWorkflowIdentifiers, ArcWorkflow__get_Parameters, ArcWorkflow__get_Components, ArcWorkflow__get_Contacts, ArcWorkflow__get_Comments, ArcWorkflow_create_Z3BB02240 } from '../Core/ArcTypes.js';
 import { tryInclude, tryIncludeSeq } from './Encode.js';
 import { OntologyAnnotation_encoder, OntologyAnnotation_decoder } from './OntologyAnnotation.js';
 import { encoder as encoder$1, decoder as decoder$3, encoderCompressed as encoderCompressed$1, decoderCompressed as decoderCompressed$1 } from './DataMap/DataMap.js';
@@ -9,35 +8,36 @@ import { encoder as encoder$3, decoder as decoder$2 } from './Process/Component.
 import { encoder as encoder$4, decoder as decoder$4 } from './Person.js';
 import { encoder as encoder$5, decoder as decoder$5 } from './Comment.js';
 import { map as map$1 } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { ArcWorkflow } from '../Core/ArcTypes.js';
 import { object, string, resizeArray } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 
 function encoder(workflow) {
   let value;
-  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["Identifier", (value = ArcWorkflow__get_Identifier(workflow), {
+  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["Identifier", (value = workflow.Identifier, {
     Encode(helpers) {
       return helpers.encodeString(value);
     }
-  })], tryInclude("WorkflowType", OntologyAnnotation_encoder, ArcWorkflow__get_WorkflowType(workflow)), tryInclude("Title", (value_1) => ({
+  })], tryInclude("WorkflowType", OntologyAnnotation_encoder, workflow.WorkflowType), tryInclude("Title", (value_1) => ({
     Encode(helpers_1) {
       return helpers_1.encodeString(value_1);
     }
-  }), ArcWorkflow__get_Title(workflow)), tryInclude("URI", (value_3) => ({
+  }), workflow.Title), tryInclude("URI", (value_3) => ({
     Encode(helpers_2) {
       return helpers_2.encodeString(value_3);
     }
-  }), ArcWorkflow__get_URI(workflow)), tryInclude("Description", (value_5) => ({
+  }), workflow.URI), tryInclude("Description", (value_5) => ({
     Encode(helpers_3) {
       return helpers_3.encodeString(value_5);
     }
-  }), ArcWorkflow__get_Description(workflow)), tryInclude("Version", (value_7) => ({
+  }), workflow.Description), tryInclude("Version", (value_7) => ({
     Encode(helpers_4) {
       return helpers_4.encodeString(value_7);
     }
-  }), ArcWorkflow__get_Version(workflow)), tryInclude("DataMap", encoder$1, ArcWorkflow__get_DataMap(workflow)), tryIncludeSeq("SubWorkflowIdentifiers", (value_9) => ({
+  }), workflow.Version), tryInclude("DataMap", encoder$1, workflow.DataMap), tryIncludeSeq("SubWorkflowIdentifiers", (value_9) => ({
     Encode(helpers_5) {
       return helpers_5.encodeString(value_9);
     }
-  }), ArcWorkflow__get_SubWorkflowIdentifiers(workflow)), tryIncludeSeq("Parameters", encoder$2, ArcWorkflow__get_Parameters(workflow)), tryIncludeSeq("Components", encoder$3, ArcWorkflow__get_Components(workflow)), tryIncludeSeq("Contacts", encoder$4, ArcWorkflow__get_Contacts(workflow)), tryIncludeSeq("Comments", encoder$5, ArcWorkflow__get_Comments(workflow))]));
+  }), workflow.SubWorkflowIdentifiers), tryIncludeSeq("Parameters", encoder$2, workflow.Parameters), tryIncludeSeq("Components", encoder$3, workflow.Components), tryIncludeSeq("Contacts", encoder$4, workflow.Contacts), tryIncludeSeq("Comments", encoder$5, workflow.Comments)]));
   return {
     Encode(helpers_6) {
       const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_6)], values_1);
@@ -47,35 +47,35 @@ function encoder(workflow) {
 }
 const decoder = object((get$) => {
   let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8, objectArg_9, arg_21, objectArg_10, arg_23, objectArg_11;
-  return ArcWorkflow_create_Z3BB02240((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("WorkflowType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("URI", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("Version", string))), unwrap((arg_13 = resizeArray(string), objectArg_6 = get$.Optional, objectArg_6.Field("SubWorkflowIdentifiers", arg_13))), unwrap((arg_15 = resizeArray(decoder$1), objectArg_7 = get$.Optional, objectArg_7.Field("Parameters", arg_15))), unwrap((arg_17 = resizeArray(decoder$2), objectArg_8 = get$.Optional, objectArg_8.Field("Components", arg_17))), unwrap((objectArg_9 = get$.Optional, objectArg_9.Field("DataMap", decoder$3))), unwrap((arg_21 = resizeArray(decoder$4), objectArg_10 = get$.Optional, objectArg_10.Field("Contacts", arg_21))), unwrap((arg_23 = resizeArray(decoder$5), objectArg_11 = get$.Optional, objectArg_11.Field("Comments", arg_23))));
+  return ArcWorkflow.create((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("WorkflowType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("URI", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("Version", string))), unwrap((arg_13 = resizeArray(string), objectArg_6 = get$.Optional, objectArg_6.Field("SubWorkflowIdentifiers", arg_13))), unwrap((arg_15 = resizeArray(decoder$1), objectArg_7 = get$.Optional, objectArg_7.Field("Parameters", arg_15))), unwrap((arg_17 = resizeArray(decoder$2), objectArg_8 = get$.Optional, objectArg_8.Field("Components", arg_17))), unwrap((objectArg_9 = get$.Optional, objectArg_9.Field("DataMap", decoder$3))), unwrap((arg_21 = resizeArray(decoder$4), objectArg_10 = get$.Optional, objectArg_10.Field("Contacts", arg_21))), unwrap((arg_23 = resizeArray(decoder$5), objectArg_11 = get$.Optional, objectArg_11.Field("Comments", arg_23))));
 });
 function encoderCompressed(stringTable, oaTable, cellTable, workflow) {
   let value;
-  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["Identifier", (value = ArcWorkflow__get_Identifier(workflow), {
+  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["Identifier", (value = workflow.Identifier, {
     Encode(helpers) {
       return helpers.encodeString(value);
     }
-  })], tryInclude("WorkflowType", OntologyAnnotation_encoder, ArcWorkflow__get_WorkflowType(workflow)), tryInclude("Title", (value_1) => ({
+  })], tryInclude("WorkflowType", OntologyAnnotation_encoder, workflow.WorkflowType), tryInclude("Title", (value_1) => ({
     Encode(helpers_1) {
       return helpers_1.encodeString(value_1);
     }
-  }), ArcWorkflow__get_Title(workflow)), tryInclude("URI", (value_3) => ({
+  }), workflow.Title), tryInclude("URI", (value_3) => ({
     Encode(helpers_2) {
       return helpers_2.encodeString(value_3);
     }
-  }), ArcWorkflow__get_URI(workflow)), tryInclude("Description", (value_5) => ({
+  }), workflow.URI), tryInclude("Description", (value_5) => ({
     Encode(helpers_3) {
       return helpers_3.encodeString(value_5);
     }
-  }), ArcWorkflow__get_Description(workflow)), tryInclude("Version", (value_7) => ({
+  }), workflow.Description), tryInclude("Version", (value_7) => ({
     Encode(helpers_4) {
       return helpers_4.encodeString(value_7);
     }
-  }), ArcWorkflow__get_Version(workflow)), tryInclude("DataMap", (dm) => encoderCompressed$1(stringTable, oaTable, cellTable, dm), ArcWorkflow__get_DataMap(workflow)), tryIncludeSeq("SubWorkflowIdentifiers", (value_9) => ({
+  }), workflow.Version), tryInclude("DataMap", (dm) => encoderCompressed$1(stringTable, oaTable, cellTable, dm), workflow.DataMap), tryIncludeSeq("SubWorkflowIdentifiers", (value_9) => ({
     Encode(helpers_5) {
       return helpers_5.encodeString(value_9);
     }
-  }), ArcWorkflow__get_SubWorkflowIdentifiers(workflow)), tryIncludeSeq("Parameters", encoder$2, ArcWorkflow__get_Parameters(workflow)), tryIncludeSeq("Components", encoder$3, ArcWorkflow__get_Components(workflow)), tryIncludeSeq("Contacts", encoder$4, ArcWorkflow__get_Contacts(workflow)), tryIncludeSeq("Comments", encoder$5, ArcWorkflow__get_Comments(workflow))]));
+  }), workflow.SubWorkflowIdentifiers), tryIncludeSeq("Parameters", encoder$2, workflow.Parameters), tryIncludeSeq("Components", encoder$3, workflow.Components), tryIncludeSeq("Contacts", encoder$4, workflow.Contacts), tryIncludeSeq("Comments", encoder$5, workflow.Comments)]));
   return {
     Encode(helpers_6) {
       const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_6)], values_1);
@@ -86,7 +86,7 @@ function encoderCompressed(stringTable, oaTable, cellTable, workflow) {
 function decoderCompressed(stringTable, oaTable, cellTable) {
   return object((get$) => {
     let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8, arg_19, objectArg_9, arg_21, objectArg_10, arg_23, objectArg_11;
-    return ArcWorkflow_create_Z3BB02240((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("WorkflowType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("URI", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("Version", string))), unwrap((arg_13 = resizeArray(string), objectArg_6 = get$.Optional, objectArg_6.Field("SubWorkflowIdentifiers", arg_13))), unwrap((arg_15 = resizeArray(decoder$1), objectArg_7 = get$.Optional, objectArg_7.Field("Parameters", arg_15))), unwrap((arg_17 = resizeArray(decoder$2), objectArg_8 = get$.Optional, objectArg_8.Field("Components", arg_17))), unwrap((arg_19 = decoderCompressed$1(stringTable, oaTable, cellTable), objectArg_9 = get$.Optional, objectArg_9.Field("DataMap", arg_19))), unwrap((arg_21 = resizeArray(decoder$4), objectArg_10 = get$.Optional, objectArg_10.Field("Contacts", arg_21))), unwrap((arg_23 = resizeArray(decoder$5), objectArg_11 = get$.Optional, objectArg_11.Field("Comments", arg_23))));
+    return ArcWorkflow.create((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("WorkflowType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("URI", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("Version", string))), unwrap((arg_13 = resizeArray(string), objectArg_6 = get$.Optional, objectArg_6.Field("SubWorkflowIdentifiers", arg_13))), unwrap((arg_15 = resizeArray(decoder$1), objectArg_7 = get$.Optional, objectArg_7.Field("Parameters", arg_15))), unwrap((arg_17 = resizeArray(decoder$2), objectArg_8 = get$.Optional, objectArg_8.Field("Components", arg_17))), unwrap((arg_19 = decoderCompressed$1(stringTable, oaTable, cellTable), objectArg_9 = get$.Optional, objectArg_9.Field("DataMap", arg_19))), unwrap((arg_21 = resizeArray(decoder$4), objectArg_10 = get$.Optional, objectArg_10.Field("Contacts", arg_21))), unwrap((arg_23 = resizeArray(decoder$5), objectArg_11 = get$.Optional, objectArg_11.Field("Comments", arg_23))));
   });
 }
 

package/dist/ts/ts/Json.d.ts

@@ -3,6 +3,7 @@ import { int32 } from '@fable-org/fable-library-js/Int32.js';
 import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
 import { Person } from './Core/Person.js';
 import { LDGraph, LDNode } from './ROCrate/LDObject.js';
+import { DataMap } from './Core/DataMap.js';
 import { ArcInvestigation, ArcRun, ArcWorkflow, ArcStudy, ArcAssay } from './Core/ArcTypes.js';
 import { FSharpList } from '@fable-org/fable-library-js/List.js';
 import { ARC } from './ARC.js';
@@ -28,6 +29,13 @@ export declare class JsonHelper_PersonJson {
 }
 export declare function JsonHelper_PersonJson_$reflection(): TypeInfo;
 export declare function JsonHelper_PersonJson_$ctor(): JsonHelper_PersonJson;
+export declare class JsonHelper_DatamapJson {
+    constructor();
+    fromJsonString(s: string): DataMap;
+    toJsonString(datamap: DataMap, spaces?: int32): string;
+}
+export declare function JsonHelper_DatamapJson_$reflection(): TypeInfo;
+export declare function JsonHelper_DatamapJson_$ctor(): JsonHelper_DatamapJson;
 export declare class JsonHelper_AssayJson {
     constructor();
     fromJsonString(s: string): ArcAssay;
@@ -109,6 +117,8 @@ export declare function JsonHelper_LDNodeJson_$ctor(): JsonHelper_LDNodeJson;
 export declare class JsonController {
     constructor();
     static get OntologyAnnotation(): JsonHelper_OntologyAnnotationJson;
+    static get Person(): JsonHelper_PersonJson;
+    static get Datamap(): JsonHelper_DatamapJson;
     static get Assay(): JsonHelper_AssayJson;
     static get Study(): JsonHelper_StudyJson;
     static get Workflow(): JsonHelper_WorkflowJson;

package/dist/ts/ts/Json.d.ts.map

@@ -1 +1 @@
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package/dist/ts/ts/Json.js

@@ -3,6 +3,7 @@ import { unwrap } from '../node_modules/@fable-org/fable-library-js/Option.js';
 import { class_type } from '../node_modules/@fable-org/fable-library-js/Reflection.js';
 import { ARCtrl_Person__Person_fromJsonString_Static_Z721C83C5, ARCtrl_Person__Person_fromISAJsonString_Static_Z721C83C5, ARCtrl_Person__Person_toJsonString_Static_71136F3F, ARCtrl_Person__Person_toISAJsonString_Static_Z3B036AA, ARCtrl_Person__Person_toROCrateJsonString_Static_71136F3F } from './JsonIO/Person.js';
 import { ARCtrl_ROCrate_LDNode__LDNode_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ROCrate_LDGraph__LDGraph_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ROCrate_LDGraph__LDGraph_toROCrateJsonString_Static_71136F3F, ARCtrl_ROCrate_LDNode__LDNode_toROCrateJsonString_Static_71136F3F } from './JsonIO/LDObject.js';
+import { ARCtrl_DataMap__DataMap_fromJsonString_Static_Z721C83C5, ARCtrl_DataMap__DataMap_toJsonString_Static_71136F3F } from './JsonIO/Datamap.js';
 import { ARCtrl_ArcAssay__ArcAssay_fromJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_fromCompressedJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_fromISAJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ArcAssay__ArcAssay_toJsonString_Static_71136F3F, ARCtrl_ArcAssay__ArcAssay_toCompressedJsonString_Static_71136F3F, ARCtrl_ArcAssay__ArcAssay_toISAJsonString_Static_Z3B036AA, ARCtrl_ArcAssay__ArcAssay_toROCrateJsonString_Static_5CABCA47 } from './JsonIO/Assay.js';
 import { ARCtrl_ArcStudy__ArcStudy_fromJsonString_Static_Z721C83C5, ARCtrl_ArcStudy__ArcStudy_fromCompressedJsonString_Static_Z721C83C5, ARCtrl_ArcStudy__ArcStudy_fromISAJsonString_Static_Z721C83C5, ARCtrl_ArcStudy__ArcStudy_fromROCrateJsonString_Static_Z721C83C5, ARCtrl_ArcStudy__ArcStudy_toJsonString_Static_71136F3F, ARCtrl_ArcStudy__ArcStudy_toCompressedJsonString_Static_71136F3F, ARCtrl_ArcStudy__ArcStudy_toISAJsonString_Static_Z3FD920F1, ARCtrl_ArcStudy__ArcStudy_toROCrateJsonString_Static_3BA23086 } from './JsonIO/Study.js';
 import { ARCtrl_ArcWorkflow__ArcWorkflow_fromJsonString_Static_Z721C83C5, ARCtrl_ArcWorkflow__ArcWorkflow_fromCompressedJsonString_Static_Z721C83C5, ARCtrl_ArcWorkflow__ArcWorkflow_toJsonString_Static_71136F3F, ARCtrl_ArcWorkflow__ArcWorkflow_toCompressedJsonString_Static_71136F3F } from './JsonIO/Workflow.js';
@@ -66,6 +67,22 @@ function JsonHelper_PersonJson_$reflection() {
 function JsonHelper_PersonJson_$ctor() {
   return new JsonHelper_PersonJson();
 }
+class JsonHelper_DatamapJson {
+  constructor() {
+  }
+  fromJsonString(s) {
+    return ARCtrl_DataMap__DataMap_fromJsonString_Static_Z721C83C5(s);
+  }
+  toJsonString(datamap, spaces) {
+    return ARCtrl_DataMap__DataMap_toJsonString_Static_71136F3F(unwrap(spaces))(datamap);
+  }
+}
+function JsonHelper_DatamapJson_$reflection() {
+  return class_type("ARCtrl.JsonHelper.DatamapJson", void 0, JsonHelper_DatamapJson);
+}
+function JsonHelper_DatamapJson_$ctor() {
+  return new JsonHelper_DatamapJson();
+}
 class JsonHelper_AssayJson {
   constructor() {
   }
@@ -266,6 +283,12 @@ class JsonController {
   static get OntologyAnnotation() {
     return new JsonHelper_OntologyAnnotationJson();
   }
+  static get Person() {
+    return new JsonHelper_PersonJson();
+  }
+  static get Datamap() {
+    return new JsonHelper_DatamapJson();
+  }
   static get Assay() {
     return new JsonHelper_AssayJson();
   }
@@ -295,4 +318,4 @@ function JsonController_$reflection() {
   return class_type("ARCtrl.JsonController", void 0, JsonController);
 }
 
-export { JsonController, JsonController_$reflection, JsonHelper_ARCJson, JsonHelper_ARCJson_$ctor, JsonHelper_ARCJson_$reflection, JsonHelper_AssayJson, JsonHelper_AssayJson_$ctor, JsonHelper_AssayJson_$reflection, JsonHelper_InvestigationJson, JsonHelper_InvestigationJson_$ctor, JsonHelper_InvestigationJson_$reflection, JsonHelper_LDGraphJson, JsonHelper_LDGraphJson_$ctor, JsonHelper_LDGraphJson_$reflection, JsonHelper_LDNodeJson, JsonHelper_LDNodeJson_$ctor, JsonHelper_LDNodeJson_$reflection, JsonHelper_OntologyAnnotationJson, JsonHelper_OntologyAnnotationJson_$ctor, JsonHelper_OntologyAnnotationJson_$reflection, JsonHelper_PersonJson, JsonHelper_PersonJson_$ctor, JsonHelper_PersonJson_$reflection, JsonHelper_RunJson, JsonHelper_RunJson_$ctor, JsonHelper_RunJson_$reflection, JsonHelper_StudyJson, JsonHelper_StudyJson_$ctor, JsonHelper_StudyJson_$reflection, JsonHelper_WorkflowJson, JsonHelper_WorkflowJson_$ctor, JsonHelper_WorkflowJson_$reflection };
+export { JsonController, JsonController_$reflection, JsonHelper_ARCJson, JsonHelper_ARCJson_$ctor, JsonHelper_ARCJson_$reflection, JsonHelper_AssayJson, JsonHelper_AssayJson_$ctor, JsonHelper_AssayJson_$reflection, JsonHelper_DatamapJson, JsonHelper_DatamapJson_$ctor, JsonHelper_DatamapJson_$reflection, JsonHelper_InvestigationJson, JsonHelper_InvestigationJson_$ctor, JsonHelper_InvestigationJson_$reflection, JsonHelper_LDGraphJson, JsonHelper_LDGraphJson_$ctor, JsonHelper_LDGraphJson_$reflection, JsonHelper_LDNodeJson, JsonHelper_LDNodeJson_$ctor, JsonHelper_LDNodeJson_$reflection, JsonHelper_OntologyAnnotationJson, JsonHelper_OntologyAnnotationJson_$ctor, JsonHelper_OntologyAnnotationJson_$reflection, JsonHelper_PersonJson, JsonHelper_PersonJson_$ctor, JsonHelper_PersonJson_$reflection, JsonHelper_RunJson, JsonHelper_RunJson_$ctor, JsonHelper_RunJson_$reflection, JsonHelper_StudyJson, JsonHelper_StudyJson_$ctor, JsonHelper_StudyJson_$reflection, JsonHelper_WorkflowJson, JsonHelper_WorkflowJson_$ctor, JsonHelper_WorkflowJson_$reflection };

package/dist/ts/ts/JsonIO/Datamap.d.ts

@@ -0,0 +1,7 @@
+import { DataMap } from '../Core/DataMap.js';
+import { int32 } from '@fable-org/fable-library-js/Int32.js';
+import { Option } from '@fable-org/fable-library-js/Option.js';
+export declare function ARCtrl_DataMap__DataMap_fromJsonString_Static_Z721C83C5(s: string): DataMap;
+export declare function ARCtrl_DataMap__DataMap_toJsonString_Static_71136F3F(spaces?: int32): ((arg0: DataMap) => string);
+export declare function ARCtrl_DataMap__DataMap_ToJsonString_71136F3F(this$: DataMap, spaces: Option<int32>): string;
+//# sourceMappingURL=Datamap.d.ts.map

package/dist/ts/ts/JsonIO/Datamap.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"Datamap.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/JsonIO/Datamap.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,OAAO,EAAE,MAAM,oBAAoB,CAAC;AAM7C,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAE,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAEvE,wBAAgB,uDAAuD,CAAC,CAAC,EAAE,MAAM,GAAG,OAAO,CAS1F;AAED,wBAAgB,oDAAoD,CAAC,MAAM,CAAC,EAAE,KAAK,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,MAAM,CAAC,CAKhH;AAED,wBAAgB,6CAA6C,CAAC,KAAK,EAAE,OAAO,EAAE,MAAM,EAAE,MAAM,CAAC,KAAK,CAAC,GAAG,MAAM,CAE3G"}

package/dist/ts/ts/JsonIO/Datamap.js

@@ -0,0 +1,28 @@
+import { fromString } from '../fable_modules/Thoth.Json.JavaScript.0.4.1/Decode.fs.js';
+import { decoder, encoder } from '../Json/DataMap/DataMap.js';
+import { toText, printf } from '../../node_modules/@fable-org/fable-library-js/String.js';
+import { toString } from '../fable_modules/Thoth.Json.JavaScript.0.4.1/Encode.fs.js';
+import { defaultSpaces } from '../Json/Encode.js';
+import { unwrap } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+
+function ARCtrl_DataMap__DataMap_fromJsonString_Static_Z721C83C5(s) {
+  let arg;
+  const matchValue = fromString(decoder, s);
+  if (matchValue.tag === /* Error */
+  1) {
+    throw new Error((arg = matchValue.fields[0], toText(printf("Error decoding string: %O"))(arg)));
+  } else {
+    return matchValue.fields[0];
+  }
+}
+function ARCtrl_DataMap__DataMap_toJsonString_Static_71136F3F(spaces) {
+  return (obj) => {
+    const value = encoder(obj);
+    return toString(defaultSpaces(spaces), value);
+  };
+}
+function ARCtrl_DataMap__DataMap_ToJsonString_71136F3F(this$, spaces) {
+  return ARCtrl_DataMap__DataMap_toJsonString_Static_71136F3F(unwrap(spaces))(this$);
+}
+
+export { ARCtrl_DataMap__DataMap_ToJsonString_71136F3F, ARCtrl_DataMap__DataMap_fromJsonString_Static_Z721C83C5, ARCtrl_DataMap__DataMap_toJsonString_Static_71136F3F };

package/dist/ts/ts/Spreadsheet/ArcWorkflow.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"ArcWorkflow.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Spreadsheet/ArcWorkflow.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAE7D,OAAO,EAAS,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAGtE,OAAO,EAAmI,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAMnL,OAAO,EAAE,WAAW,EAAE,MAAM,gEAAgE,CAAC;AAG7F,OAAO,EAAE,UAAU,EAAE,MAAM,+DAA+D,CAAC;AAI3F,wBAAgB,oBAAoB,CAAC,IAAI,EAAE,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,WAAW,CA8D3F;AAED,wBAAgB,kBAAkB,CAAC,QAAQ,EAAE,WAAW,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAE7F;AAED,wBAAgB,2BAA2B,CAAC,QAAQ,EAAE,WAAW,GAAG,WAAW,CAM9E;AAED,wBAAgB,6BAA6B,CAAC,KAAK,EAAE,WAAW,GAAG,WAAW,CAQ7E;AAED,wBAAgB,gCAAgC,CAAC,QAAQ,EAAE,WAAW,GAAG,QAAQ,CAAC,QAAQ,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,CAE1G;AAED,wBAAgB,kCAAkC,CAAC,UAAU,EAAE,QAAQ,CAAC,QAAQ,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,WAAW,CAQ9G;AAED,wBAAgB,+BAA+B,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAErE;AAED,wBAAgB,2BAA2B,CAAC,KAAK,EAAE,WAAW,GAAG,OAAO,CAEvE;AAED,wBAAgB,+BAA+B,CAAC,GAAG,EAAE,UAAU,GAAG,MAAM,CAAC,WAAW,CAAC,CAEpF;AAED;;GAEG;AACH,wBAAgB,8DAA8D,CAAC,GAAG,EAAE,UAAU,GAAG,WAAW,CAkB3G;AAED;;GAEG;AACH,wBAAgB,6DAA6D,CAAC,QAAQ,EAAE,WAAW,GAAG,UAAU,CAK/G;AAED;;GAEG;AACH,wBAAgB,4CAA4C,CAAC,KAAK,EAAE,WAAW,GAAG,UAAU,CAE3F"}
+{"version":3,"file":"ArcWorkflow.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Spreadsheet/ArcWorkflow.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAE7D,OAAO,EAAS,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAGtE,OAAO,EAAE,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAMlD,OAAO,EAAE,WAAW,EAAE,MAAM,gEAAgE,CAAC;AAG7F,OAAO,EAAE,UAAU,EAAE,MAAM,+DAA+D,CAAC;AAI3F,wBAAgB,oBAAoB,CAAC,IAAI,EAAE,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,WAAW,CA8D3F;AAED,wBAAgB,kBAAkB,CAAC,QAAQ,EAAE,WAAW,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAE7F;AAED,wBAAgB,2BAA2B,CAAC,QAAQ,EAAE,WAAW,GAAG,WAAW,CAM9E;AAED,wBAAgB,6BAA6B,CAAC,KAAK,EAAE,WAAW,GAAG,WAAW,CAQ7E;AAED,wBAAgB,gCAAgC,CAAC,QAAQ,EAAE,WAAW,GAAG,QAAQ,CAAC,QAAQ,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,CAE1G;AAED,wBAAgB,kCAAkC,CAAC,UAAU,EAAE,QAAQ,CAAC,QAAQ,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,WAAW,CAQ9G;AAED,wBAAgB,+BAA+B,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAErE;AAED,wBAAgB,2BAA2B,CAAC,KAAK,EAAE,WAAW,GAAG,OAAO,CAEvE;AAED,wBAAgB,+BAA+B,CAAC,GAAG,EAAE,UAAU,GAAG,MAAM,CAAC,WAAW,CAAC,CAEpF;AAED;;GAEG;AACH,wBAAgB,8DAA8D,CAAC,GAAG,EAAE,UAAU,GAAG,WAAW,CAmB3G;AAED;;GAEG;AACH,wBAAgB,6DAA6D,CAAC,QAAQ,EAAE,WAAW,GAAG,UAAU,CAK/G;AAED;;GAEG;AACH,wBAAgB,4CAA4C,CAAC,KAAK,EAAE,WAAW,GAAG,UAAU,CAE3F"}

package/dist/ts/ts/Spreadsheet/ArcWorkflow.js

@@ -2,7 +2,7 @@ import { getEnumerator } from '../../node_modules/@fable-org/fable-library-js/Ut
 import { fromRows as fromRows$1, toRows } from './Metadata/Workflow.js';
 import { value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { empty, ofSeq } from '../../node_modules/@fable-org/fable-library-js/List.js';
-import { ArcWorkflow__set_Contacts_Z7E0D1CA3, ArcWorkflow_create_Z3BB02240, ArcWorkflow__get_Contacts, ArcWorkflow__set_DataMap_51F1E59E } from '../Core/ArcTypes.js';
+import { ArcWorkflow } from '../Core/ArcTypes.js';
 import { fromRows, toRows as toRows$1 } from './Metadata/Contacts.js';
 import { createMissingIdentifier } from '../Core/Helper/Identifier.js';
 import { SparseRowModule_tryGetValueAt, SparseRowModule_fromValues, SparseRowModule_writeToSheet, SparseRowModule_fromFsRow, SparseRowModule_getAllValues, SparseRowModule_fromAllValues } from './Metadata/SparseTable.js';
@@ -57,10 +57,10 @@ function ArcWorkflow_fromRows(rows) {
           default:
             if (workflow != null) {
               const workflow_2 = value(workflow);
-              ArcWorkflow__set_Contacts_Z7E0D1CA3(workflow_2, Array.from(contacts));
+              workflow_2.Contacts = Array.from(contacts);
               return workflow_2;
             } else {
-              return ArcWorkflow_create_Z3BB02240(createMissingIdentifier(), void 0, void 0, void 0, void 0, void 0, void 0, void 0, void 0, void 0, Array.from(contacts));
+              return ArcWorkflow.create(createMissingIdentifier(), void 0, void 0, void 0, void 0, void 0, void 0, void 0, void 0, void 0, Array.from(contacts));
             }
         }
         break;
@@ -73,7 +73,7 @@ function ArcWorkflow_fromRows(rows) {
   }
 }
 function ArcWorkflow_toRows(workflow) {
-  return delay(() => append(singleton(SparseRowModule_fromValues(["WORKFLOW"])), delay(() => append(toRows(workflow), delay(() => append(singleton(SparseRowModule_fromValues(["WORKFLOW CONTACTS"])), delay(() => toRows$1("Workflow Person", ofSeq(ArcWorkflow__get_Contacts(workflow))))))))));
+  return delay(() => append(singleton(SparseRowModule_fromValues(["WORKFLOW"])), delay(() => append(toRows(workflow), delay(() => append(singleton(SparseRowModule_fromValues(["WORKFLOW CONTACTS"])), delay(() => toRows$1("Workflow Person", ofSeq(workflow.Contacts)))))))));
 }
 function ArcWorkflow_toMetadataSheet(workflow) {
   const sheet = new FsWorksheet("isa_workflow");
@@ -116,11 +116,12 @@ function ARCtrl_ArcWorkflow__ArcWorkflow_fromFsWorkbook_Static_32154C9D(doc) {
     const matchValue = ArcWorkflow_tryGetMetadataSheet(doc);
     if (matchValue == null) {
       toConsole(printf('Cannot retrieve metadata: Workflow file does not contain "%s" sheet.'))("isa_workflow");
-      workflowMetadata = ArcWorkflow_create_Z3BB02240(createMissingIdentifier());
+      workflowMetadata = ArcWorkflow.create(createMissingIdentifier());
     } else {
       workflowMetadata = ArcWorkflow_fromMetadataSheet(value(matchValue));
     }
-    ArcWorkflow__set_DataMap_51F1E59E(workflowMetadata, tryPick(tryFromFsWorksheet, doc.GetWorksheets()));
+    const datamapSheet = tryPick(tryFromFsWorksheet, doc.GetWorksheets());
+    workflowMetadata.DataMap = datamapSheet;
     return workflowMetadata;
   } catch (err) {
     const arg_1 = err.message;

package/dist/ts/ts/Spreadsheet/Metadata/Workflow.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Workflow.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Workflow.ts"],"names":[],"mappings":"AAAA,OAAO,EAA6C,UAAU,EAAW,MAAM,qCAAqC,CAAC;AACrH,OAAO,EAAsB,MAAM,EAAS,MAAM,uCAAuC,CAAC;AAO1F,OAAO,EAAkS,WAAW,EAAoB,MAAM,wBAAwB,CAAC;AAEvW,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AAEzD,OAAO,EAA6F,WAAW,EAA+E,MAAM,kBAAkB,CAAC;AACvN,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAI7D,OAAO,EAAE,WAAW,EAAc,MAAM,qCAAqC,CAAC;AAE9E,eAAO,MAAM,eAAe,eAAe,CAAC;AAE5C,eAAO,MAAM,UAAU,UAAU,CAAC;AAElC,eAAO,MAAM,gBAAgB,gBAAgB,CAAC;AAE9C,eAAO,MAAM,iBAAiB,SAAS,CAAC;AAExC,eAAO,MAAM,4BAA4B,+BAA+B,CAAC;AAEzE,eAAO,MAAM,sBAAsB,yBAAyB,CAAC;AAE7D,eAAO,MAAM,2BAA2B,6BAA6B,CAAC;AAEtE,eAAO,MAAM,QAAQ,QAAQ,CAAC;AAE9B,eAAO,MAAM,YAAY,YAAY,CAAC;AAEtC,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,kCAAkC,qCAAqC,CAAC;AAErF,eAAO,MAAM,4BAA4B,+BAA+B,CAAC;AAEzE,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,sCAAsC,0CAA0C,CAAC;AAE9F,eAAO,MAAM,gCAAgC,oCAAoC,CAAC;AAElF,eAAO,MAAM,aAAa,cAAc,CAAC;AAEzC,eAAO,MAAM,MAAM,EAAE,UAAU,CAAC,MAAM,CAAoZ,CAAC;AAE3b,wBAAgB,UAAU,CAAC,UAAU,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,WAAW,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,YAAY,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,+BAA+B,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,yBAAyB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,sBAAsB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,cAAc,EAAE,MAAM,EAAE,6BAA6B,EAAE,MAAM,EAAE,uBAAuB,EAAE,MAAM,EAAE,cAAc,EAAE,MAAM,EAAE,cAAc,EAAE,MAAM,EAAE,iCAAiC,EAAE,MAAM,EAAE,2BAA2B,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,WAAW,CAqBtlB;AAED,wBAAgB,eAAe,CAAC,MAAM,EAAE,WAAW,GAAG,WAAW,CAGhE;AAED,wBAAgB,aAAa,CAAC,QAAQ,EAAE,WAAW,GAAG,WAAW,CAqChE;AAED,wBAAgB,QAAQ,CAAC,UAAU,EAAE,KAAK,EAAE,IAAI,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,WAAW,CAAC,CAGlJ;AAED,wBAAgB,MAAM,CAAC,QAAQ,EAAE,WAAW,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAEjF"}
+{"version":3,"file":"Workflow.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Workflow.ts"],"names":[],"mappings":"AAAA,OAAO,EAA6C,UAAU,EAAW,MAAM,qCAAqC,CAAC;AACrH,OAAO,EAAsB,MAAM,EAAS,MAAM,uCAAuC,CAAC;AAQ1F,OAAO,EAAE,WAAW,EAAE,MAAM,wBAAwB,CAAC;AACrD,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AAEzD,OAAO,EAA6F,WAAW,EAA+E,MAAM,kBAAkB,CAAC;AACvN,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAI7D,OAAO,EAAE,WAAW,EAAc,MAAM,qCAAqC,CAAC;AAE9E,eAAO,MAAM,eAAe,eAAe,CAAC;AAE5C,eAAO,MAAM,UAAU,UAAU,CAAC;AAElC,eAAO,MAAM,gBAAgB,gBAAgB,CAAC;AAE9C,eAAO,MAAM,iBAAiB,SAAS,CAAC;AAExC,eAAO,MAAM,4BAA4B,+BAA+B,CAAC;AAEzE,eAAO,MAAM,sBAAsB,yBAAyB,CAAC;AAE7D,eAAO,MAAM,2BAA2B,6BAA6B,CAAC;AAEtE,eAAO,MAAM,QAAQ,QAAQ,CAAC;AAE9B,eAAO,MAAM,YAAY,YAAY,CAAC;AAEtC,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,kCAAkC,qCAAqC,CAAC;AAErF,eAAO,MAAM,4BAA4B,+BAA+B,CAAC;AAEzE,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,sCAAsC,0CAA0C,CAAC;AAE9F,eAAO,MAAM,gCAAgC,oCAAoC,CAAC;AAElF,eAAO,MAAM,aAAa,cAAc,CAAC;AAEzC,eAAO,MAAM,MAAM,EAAE,UAAU,CAAC,MAAM,CAAoZ,CAAC;AAE3b,wBAAgB,UAAU,CAAC,UAAU,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,WAAW,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,YAAY,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,+BAA+B,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,yBAAyB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,sBAAsB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,cAAc,EAAE,MAAM,EAAE,6BAA6B,EAAE,MAAM,EAAE,uBAAuB,EAAE,MAAM,EAAE,cAAc,EAAE,MAAM,EAAE,cAAc,EAAE,MAAM,EAAE,iCAAiC,EAAE,MAAM,EAAE,2BAA2B,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,WAAW,CAiCtlB;AAED,wBAAgB,eAAe,CAAC,MAAM,EAAE,WAAW,GAAG,WAAW,CAGhE;AAED,wBAAgB,aAAa,CAAC,QAAQ,EAAE,WAAW,GAAG,WAAW,CAqChE;AAED,wBAAgB,QAAQ,CAAC,UAAU,EAAE,KAAK,EAAE,IAAI,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,WAAW,CAAC,CAGlJ;AAED,wBAAgB,MAAM,CAAC,QAAQ,EAAE,WAAW,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAEjF"}

package/dist/ts/ts/Spreadsheet/Metadata/Workflow.js

@@ -4,8 +4,8 @@ import { map } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { OntologyAnnotation } from '../../Core/OntologyAnnotation.js';
 import { Option_fromValueWithDefault, ResizeArray_iter } from '../../Core/Helper/Collections.js';
 import { ProtocolParameter_fromAggregatedStrings, Component_fromAggregatedStrings, ProtocolParameter_toAggregatedStrings, Component_toAggregatedStrings } from './Conversions.js';
-import { ArcWorkflow_make, ArcWorkflow__get_Identifier, ArcWorkflow__get_WorkflowType, ArcWorkflow__get_Parameters, ArcWorkflow__get_Components, ArcWorkflow__get_SubWorkflowIdentifiers, ArcWorkflow__get_Title, ArcWorkflow__get_Description, ArcWorkflow__get_URI, ArcWorkflow__get_Version, ArcWorkflow__get_Comments } from '../../Core/ArcTypes.js';
 import { createMissingIdentifier, Workflow_tryIdentifierFromFileName, Workflow_fileNameFromIdentifier } from '../../Core/Helper/Identifier.js';
+import { ArcWorkflow } from '../../Core/ArcTypes.js';
 import { Comment_fromString, Comment_toString } from './Comment.js';
 import { SparseTable__TryGetValueDefault_5BAE6133, SparseTable__TryGetValue_11FD62A8, SparseTable_Create_Z2192E64B, SparseTable, SparseTable_FromRows_Z5579EC29, SparseTable_ToRows_759CAFC1 } from './SparseTable.js';
 import { join } from '../../../node_modules/@fable-org/fable-library-js/String.js';
@@ -32,7 +32,6 @@ const componentsTypeTermSourceREFLabel = "Components Type Term Source REF";
 const fileNameLabel = "File Name";
 const labels = ofArray([identifierLabel, titleLabel, descriptionLabel, workflowTypeLabel, typeTermAccessionNumberLabel, typeTermSourceREFLabel, subWorkflowIdentifiersLabel, uriLabel, versionLabel, parametersNameLabel, parametersTermAccessionNumberLabel, parametersTermSourceREFLabel, componentsNameLabel, componentsTypeLabel, componentsTypeTermAccessionNumberLabel, componentsTypeTermSourceREFLabel, fileNameLabel]);
 function fromString(identifier, title, description, workflowType, workflowTypeTermAccessionNumber, workflowTypeTermSourceREF, subworkflowIdentifiers, uri, version, parametersName, parametersTermAccessionNumber, parametersTermSourceREF, componentsName, componentsType, componentsTypeTermAccessionNumber, componentsTypeTermSourceREF, fileName, comments) {
-  let matchValue;
   let subworkflowIdentifiers_2;
   if (subworkflowIdentifiers == null) {
     subworkflowIdentifiers_2 = [];
@@ -50,7 +49,18 @@ function fromString(identifier, title, description, workflowType, workflowTypeTe
   let components;
   const collection_2 = Component_fromAggregatedStrings(";", componentsName, componentsType, componentsTypeTermSourceREF, componentsTypeTermAccessionNumber);
   components = Array.from(collection_2);
-  return ArcWorkflow_make(identifier == null ? fileName == null ? createMissingIdentifier() : (matchValue = Workflow_tryIdentifierFromFileName(value(fileName)), matchValue != null ? value(matchValue) : createMissingIdentifier()) : value(identifier), title, description, workflowType_1, uri, version, subworkflowIdentifiers_2, parameters, components, void 0, [], comments);
+  let identifier_4;
+  if (identifier == null) {
+    if (fileName == null) {
+      identifier_4 = createMissingIdentifier();
+    } else {
+      const matchValue = Workflow_tryIdentifierFromFileName(value(fileName));
+      identifier_4 = matchValue != null ? value(matchValue) : createMissingIdentifier();
+    }
+  } else {
+    identifier_4 = value(identifier);
+  }
+  return ArcWorkflow.make(identifier_4, title, description, workflowType_1, uri, version, subworkflowIdentifiers_2, parameters, components, void 0, [], comments);
 }
 function fromSparseTable(matrix) {
   const comments = map$1((k) => Comment_fromString(k, SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [k, 0])), matrix.CommentKeys);
@@ -59,22 +69,22 @@ function fromSparseTable(matrix) {
 function toSparseTable(workflow) {
   const matrix = SparseTable_Create_Z2192E64B(void 0, labels, void 0, 2);
   let commentKeys = empty();
-  const patternInput = ArcWorkflow__get_Identifier(workflow).startsWith("MISSING_IDENTIFIER_") ? ["", ""] : [ArcWorkflow__get_Identifier(workflow), Workflow_fileNameFromIdentifier(ArcWorkflow__get_Identifier(workflow))];
+  const patternInput = workflow.Identifier.startsWith("MISSING_IDENTIFIER_") ? ["", ""] : [workflow.Identifier, Workflow_fileNameFromIdentifier(workflow.Identifier)];
   let wt;
-  const tt = defaultArg(ArcWorkflow__get_WorkflowType(workflow), new OntologyAnnotation());
+  const tt = defaultArg(workflow.WorkflowType, new OntologyAnnotation());
   wt = OntologyAnnotation.toStringObject(tt, true);
-  const pAgg = ProtocolParameter_toAggregatedStrings(";", ofSeq(ArcWorkflow__get_Parameters(workflow)));
-  const cAgg = Component_toAggregatedStrings(";", ofSeq(ArcWorkflow__get_Components(workflow)));
-  const subWorkflowsAgg = join(";", ArcWorkflow__get_SubWorkflowIdentifiers(workflow));
+  const pAgg = ProtocolParameter_toAggregatedStrings(";", ofSeq(workflow.Parameters));
+  const cAgg = Component_toAggregatedStrings(";", ofSeq(workflow.Components));
+  const subWorkflowsAgg = join(";", workflow.SubWorkflowIdentifiers);
   addToDict(matrix.Matrix, [identifierLabel, 1], patternInput[0]);
-  addToDict(matrix.Matrix, [titleLabel, 1], defaultArg(ArcWorkflow__get_Title(workflow), ""));
-  addToDict(matrix.Matrix, [descriptionLabel, 1], defaultArg(ArcWorkflow__get_Description(workflow), ""));
+  addToDict(matrix.Matrix, [titleLabel, 1], defaultArg(workflow.Title, ""));
+  addToDict(matrix.Matrix, [descriptionLabel, 1], defaultArg(workflow.Description, ""));
   addToDict(matrix.Matrix, [workflowTypeLabel, 1], wt.TermName);
   addToDict(matrix.Matrix, [typeTermAccessionNumberLabel, 1], wt.TermAccessionNumber);
   addToDict(matrix.Matrix, [typeTermSourceREFLabel, 1], wt.TermSourceREF);
   addToDict(matrix.Matrix, [subWorkflowIdentifiersLabel, 1], subWorkflowsAgg);
-  addToDict(matrix.Matrix, [uriLabel, 1], defaultArg(ArcWorkflow__get_URI(workflow), ""));
-  addToDict(matrix.Matrix, [versionLabel, 1], defaultArg(ArcWorkflow__get_Version(workflow), ""));
+  addToDict(matrix.Matrix, [uriLabel, 1], defaultArg(workflow.URI, ""));
+  addToDict(matrix.Matrix, [versionLabel, 1], defaultArg(workflow.Version, ""));
   addToDict(matrix.Matrix, [parametersNameLabel, 1], pAgg.TermNameAgg);
   addToDict(matrix.Matrix, [parametersTermAccessionNumberLabel, 1], pAgg.TermAccessionNumberAgg);
   addToDict(matrix.Matrix, [parametersTermSourceREFLabel, 1], pAgg.TermSourceREFAgg);
@@ -88,7 +98,7 @@ function toSparseTable(workflow) {
     const n = patternInput_1[0];
     commentKeys = cons(n, commentKeys);
     addToDict(matrix.Matrix, [n, 1], patternInput_1[1]);
-  }, ArcWorkflow__get_Comments(workflow));
+  }, workflow.Comments);
   return new SparseTable(matrix.Matrix, matrix.Keys, reverse(List_distinct(commentKeys, {
     Equals: (x, y) => x === y,
     GetHashCode: stringHash

package/package.json

@@ -1,7 +1,7 @@
 {
   "type": "module",
   "name": "@nfdi4plants/arctrl",
-  "version": "3.0.0-beta.6",
+  "version": "3.0.0-beta.8",
   "description": "Top level ARC DataModel and API function descriptions.",
   "repository": {
     "type": "git",